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Started by upstream project "MUQ2_Nightly" build number 256 originally caused by: Started by timer Running as SYSTEM [EnvInject] - Loading node environment variables. Building remotely on reynolds in workspace /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds [WS-CLEANUP] Deleting project workspace... [WS-CLEANUP] Deferred wipeout is used... [WS-CLEANUP] Done The recommended git tool is: NONE No credentials specified Cloning the remote Git repository Cloning repository https://bitbucket.org/mituq/muq2.git > git init /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds # timeout=10 Fetching upstream changes from https://bitbucket.org/mituq/muq2.git > git --version # timeout=10 > git --version # 'git version 2.7.4' > git fetch --tags --progress https://bitbucket.org/mituq/muq2.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git config remote.origin.url https://bitbucket.org/mituq/muq2.git # timeout=10 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10 Avoid second fetch Checking out Revision d3a21f868a37186fb71c0461c5a0ea5888ffd248 (refs/remotes/origin/master) > git config core.sparsecheckout # timeout=10 > git checkout -f d3a21f868a37186fb71c0461c5a0ea5888ffd248 # timeout=10 Commit message: "Merged in mparno/CollectionMeta (pull request #31)" > git rev-list --no-walk d3a21f868a37186fb71c0461c5a0ea5888ffd248 # timeout=10 [Checks API] No suitable checks publisher found. [reynolds] $ /bin/bash -xe /tmp/jenkins2481832619049139137.sh + bash -ex SupportScripts/Jenkins/acdlBuildScript.sh + shopt -s nocasematch ++ pwd + dir=/jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds ++ echo /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds ++ tr '[:lower:]' '[:upper:]' + bin_dir=/JENKINS/WORKSPACE/MUQ2_NIGHTLY/PYVERSION/PYTHON3/LABEL/REYNOLDS + echo /JENKINS/WORKSPACE/MUQ2_NIGHTLY/PYVERSION/PYTHON3/LABEL/REYNOLDS + grep -q PYTHON + with_python=1 + temp=3/LABEL/REYNOLDS + PYTHON_VERSION=3 ++ hostname + [[ reynolds == \r\e\y\n\o\l\d\s ]] + BOOST_SOURCE=/home/mparno/util/boost_1_63_0.tar.gz + HDF5_SOURCE=/home/mparno/util/CMake-hdf5-1.8.19.tar.gz + NANOFLANN_SOURCE=/home/mparno/util/nanoflann-src.zip + NLOPT_SOURCE=/home/mparno/util/nlopt-2.4.2.tar.gz + STANMATH_SOURCE=/home/mparno/util/stanmath-v2.18.0.zip + GTEST_DIR=/home/mparno/util/gtest_install + my_cc_compiler=gcc + my_cxx_compiler=g++ + echo 'C Compiler = gcc' C Compiler = gcc + echo 'CXX Compiler = g++' CXX Compiler = g++ + BUILD_DIR=/jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/build + INSTALL_DIR=/jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install + echo 'BUILD_DIR = /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/build' BUILD_DIR = /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/build + echo 'SOURCE = /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds' SOURCE = /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds + '[' -d /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/build ']' + echo 'Build directory, /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/build already exists.' Build directory, /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/build already exists. + cd /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/build + '[' -d CMakeFiles ']' + cmake -DCMAKE_BUILD_TYPE=Release -DCMAKE_INSTALL_PREFIX=/jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install -DCMAKE_CXX_COMPILER=g++ -DCMAKE_C_COMPILER=gcc -DMUQ_USE_GTEST=ON -DMUQ_GTEST_DIR=/home/mparno/util/gtest_install -DBOOST_EXTERNAL_SOURCE=/home/mparno/util/boost_1_63_0.tar.gz -DHDF5_EXTERNAL_SOURCE=/home/mparno/util/CMake-hdf5-1.8.19.tar.gz -DNANOFLANN_EXTERNAL_SOURCE=/home/mparno/util/nanoflann-src.zip -DNLOPT_EXTERNAL_SOURCE=/home/mparno/util/nlopt-2.4.2.tar.gz -DSTANMATH_EXTERNAL_SOURCE=/home/mparno/util/stanmath-v2.18.0.zip -DMUQ_USE_PYTHON=1 -DPYBIND11_PYTHON_VERSION=3 ../ -- The C compiler identification is GNU 5.5.0 -- The CXX compiler identification is GNU 5.5.0 -- Check for working C compiler: /usr/bin/gcc -- Check for working C compiler: /usr/bin/gcc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/g++ -- Check for working CXX compiler: /usr/bin/g++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- This is MUQ, the MIT UQ Library! -- User defined build type = Release -- Final build type = Release -- C++11 found. -- Performing Test HAS_CXX11 -- Performing Test HAS_CXX11 - Success -- Performing Test ANYCAST_COMPILES -- Performing Test ANYCAST_COMPILES - Failed -- Performing Test CPP11_AUTO_COMPILES -- Performing Test CPP11_AUTO_COMPILES - Success -- Performing Test CPP11_SHAREDPTR_COMPILES -- Performing Test CPP11_SHAREDPTR_COMPILES - Success -- MUQ_ENABLEGROUP_UTILITIES_HDF5 = ON -- MUQ_ENABLEGROUP_UTILITIES_CORE = ON -- MUQ_ENABLEGROUP_UTILITIES_MULTIINDEX = ON -- MUQ_ENABLEGROUP_UTILITIES_CORE_PYTHON = ON -- MUQ_ENABLEGROUP_MODELING_CORE = ON -- MUQ_ENABLEGROUP_MODELING_STAN = ON -- MUQ_ENABLEGROUP_MODELING_FLANN = ON -- MUQ_ENABLEGROUP_MODELING_LINEARALGEBRA = ON -- MUQ_ENABLEGROUP_MODELING_DISTRIBUTIONS = ON -- MUQ_ENABLEGROUP_MODELING_SUNDIALS_MODELS = ON -- MUQ_ENABLEGROUP_MODELING_CORE_PYTHON = ON -- MUQ_ENABLEGROUP_MODELING_SUNDIALS_MODELS_PYTHON = ON -- MUQ_ENABLEGROUP_MODELING_PDE_PYTHON = ON -- MUQ_ENABLEGROUP_OPTIMIZATION_CORE = ON -- MUQ_ENABLEGROUP_OPTIMIZATION_CORE_PYTHON = ON -- MUQ_ENABLEGROUP_APPROXIMATION_REGRESSION = ON -- MUQ_ENABLEGROUP_APPROXIMATION_POLYNOMIALS = ON -- MUQ_ENABLEGROUP_APPROXIMATION_QUADRATURE = ON -- MUQ_ENABLEGROUP_APPROXIMATION_POLYNOMIALCHAOS = ON -- MUQ_ENABLEGROUP_APPROXIMATION_GP_Kernels = ON -- MUQ_ENABLEGROUP_APPROXIMATION_GP = ON -- MUQ_ENABLEGROUP_APPROXIMATION_CORE_PYTHON = ON -- MUQ_ENABLEGROUP_SAMPLING_PROBLEMS = ON -- MUQ_ENABLEGROUP_FANCY_SAMPLING_PROBLEMS = ON -- MUQ_ENABLEGROUP_SAMPLING_ALGORITHM = ON -- MUQ_ENABLEGROUP_SAMPLINGALGORITHMS_CORE_PYTHON = ON -- MUQ_ENABLEGROUP_INFERENCE_FILTERING = ON -- Configuring compile group UTILITIES_HDF5 -- Configuring compile group UTILITIES_CORE -- Configuring compile group UTILITIES_MULTIINDEX -- Configuring compile group UTILITIES_CORE_PYTHON -- Configuring compile group MODELING_CORE -- Configuring compile group MODELING_STAN -- Configuring compile group MODELING_FLANN -- Configuring compile group MODELING_LINEARALGEBRA -- Configuring compile group MODELING_DISTRIBUTIONS -- Configuring compile group MODELING_SUNDIALS_MODELS -- Configuring compile group MODELING_CORE_PYTHON -- Configuring compile group MODELING_SUNDIALS_MODELS_PYTHON -- Configuring compile group MODELING_PDE_PYTHON -- The MODELING_PDE_PYTHON group depends on the MODELING_PDE group, but the MODELING_PDE group was not enabled. -- Turning the MODELING_PDE group on. -- Forcibly enabling MODELING_PDE -- Configuring compile group OPTIMIZATION_CORE -- Configuring compile group OPTIMIZATION_CORE_PYTHON -- Configuring compile group APPROXIMATION_REGRESSION -- Configuring compile group APPROXIMATION_POLYNOMIALS -- Configuring compile group APPROXIMATION_QUADRATURE -- Configuring compile group APPROXIMATION_POLYNOMIALCHAOS -- Configuring compile group APPROXIMATION_GP_Kernels -- Configuring compile group APPROXIMATION_GP -- Configuring compile group APPROXIMATION_CORE_PYTHON -- Configuring compile group SAMPLING_PROBLEMS -- Configuring compile group FANCY_SAMPLING_PROBLEMS -- Configuring compile group SAMPLING_ALGORITHM -- Configuring compile group SAMPLINGALGORITHMS_CORE_PYTHON -- Configuring compile group INFERENCE_FILTERING -- Adding target muqUtilities for compile group UTILITIES_HDF5 -- Adding target muqUtilities for compile group UTILITIES_CORE -- Adding target muqUtilities for compile group UTILITIES_MULTIINDEX -- Adding target pymuqUtilities for compile group UTILITIES_CORE_PYTHON -- Adding target muqModeling for compile group MODELING_CORE -- Adding target muqModeling for compile group MODELING_STAN -- Adding target muqModeling for compile group MODELING_FLANN -- Adding target muqModeling for compile group MODELING_LINEARALGEBRA -- Adding target muqModeling for compile group MODELING_DISTRIBUTIONS -- Adding target muqModeling for compile group MODELING_SUNDIALS_MODELS -- Adding target pymuqModeling_ for compile group MODELING_CORE_PYTHON -- Adding target pymuqModeling_ for compile group MODELING_SUNDIALS_MODELS_PYTHON -- Adding target pymuqModeling_ for compile group MODELING_PDE_PYTHON -- Adding target muqOptimization for compile group OPTIMIZATION_CORE -- Adding target pymuqOptimization for compile group OPTIMIZATION_CORE_PYTHON -- Adding target muqApproximation for compile group APPROXIMATION_REGRESSION -- Adding target muqApproximation for compile group APPROXIMATION_POLYNOMIALS -- Adding target muqApproximation for compile group APPROXIMATION_QUADRATURE -- Adding target muqApproximation for compile group APPROXIMATION_POLYNOMIALCHAOS -- Adding target muqApproximation for compile group APPROXIMATION_GP_Kernels -- Adding target muqApproximation for compile group APPROXIMATION_GP -- Adding target pymuqApproximationWrappers for compile group APPROXIMATION_CORE_PYTHON -- Adding target muqSamplingAlgorithms for compile group SAMPLING_PROBLEMS -- Adding target muqSamplingAlgorithms for compile group FANCY_SAMPLING_PROBLEMS -- Adding target muqSamplingAlgorithms for compile group SAMPLING_ALGORITHM -- Adding target pymuqSamplingAlgorithms for compile group SAMPLINGALGORITHMS_CORE_PYTHON -- Adding target muqInference for compile group INFERENCE_FILTERING -- Found PkgConfig: /usr/bin/pkg-config (found version "0.29.1") -- Could NOT find eigen3 (missing: EIGEN3_INCLUDE_DIR) -- Adding /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/muq_external//include/eigen3 for an Eigen include directory. -- Could NOT find STANMATH (missing: STANMATH_INCLUDE_DIR) -- Sundials test for SUNDIALS_INCLUDE_DIR-NOTFOUND/cvodes/cvodes_spgmr.h failed; We require Sundials 2.x, falling back to internal build of Sundials -- Found Nlopt: /usr/lib/x86_64-linux-gnu/libnlopt.so -- Performing Test NLOPT_COMPILES -- Performing Test NLOPT_COMPILES - Success -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -- Performing Test HDF5_COMPILES -- Performing Test HDF5_COMPILES - Success -- Could NOT find nanoflann (missing: NANOFLANN_INCLUDE_DIR) -- Adding /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/muq_external//include/nanoflann for a nanoflann include directory. -- Boost version: 1.58.0 -- Found the following Boost libraries: -- system -- filesystem -- graph -- Boost version: 1.58.0 -- Found the following Boost libraries: -- system -- filesystem -- graph -- Found BOOST: /usr/lib/x86_64-linux-gnu/libboost_system.so;/usr/lib/x86_64-linux-gnu/libboost_filesystem.so;/usr/lib/x86_64-linux-gnu/libboost_graph.so -- Performing Test BOOST_GRAPH_COMPILES -- Performing Test BOOST_GRAPH_COMPILES - Success -- Performing Test BOOST_DIRECTORY_ITERATOR_COMPILES -- Performing Test BOOST_DIRECTORY_ITERATOR_COMPILES - Success -- Found GTEST: /home/mparno/util/gtest_install/lib/libgtest.a -- Performing Test GTEST_COMPILES -- Performing Test GTEST_COMPILES - Success CMake Warning at cmake/finds/OptionalDependencySearch.cmake:61 (FIND_PACKAGE): By not providing "Findpybind11.cmake" in CMAKE_MODULE_PATH this project has asked CMake to find a package configuration file provided by "pybind11", but CMake did not find one. Could not find a package configuration file provided by "pybind11" (requested version 2.3) with any of the following names: pybind11Config.cmake pybind11-config.cmake Add the installation prefix of "pybind11" to CMAKE_PREFIX_PATH or set "pybind11_DIR" to a directory containing one of the above files. If "pybind11" provides a separate development package or SDK, be sure it has been installed. Call Stack (most recent call first): cmake/DependencySearch.cmake:5 (include) CMakeLists.txt:45 (INCLUDE) -- Falling back to internal pybind11 version -- Found PythonInterp: /usr/bin/python3 (found suitable version "3.5.2", minimum required is "3") -- Found PythonLibs: /usr/lib/x86_64-linux-gnu/libpython3.5m.so -- pybind11 v2.4.dev4 EIGEN3HDF5PYTHONBOOSTSTANMATHNANOFLANNMODELING_COREUTILITIES_CORESUNDIALSNLOPT MUQ_LINK_LIBS = /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/muq_external/lib/libsundials_cvodes.so;/jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/muq_external/lib/libsundials_idas.so;/jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/muq_external/lib/libsundials_kinsol.so;/jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/muq_external/lib/libsundials_nvecserial.so;/usr/lib/x86_64-linux-gnu/libnlopt.so;/usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so;/usr/lib/x86_64-linux-gnu/hdf5/serial/lib/libhdf5_hl.so;/usr/lib/x86_64-linux-gnu/libboost_system.so;/usr/lib/x86_64-linux-gnu/libboost_filesystem.so;/usr/lib/x86_64-linux-gnu/libboost_graph.so -- Creating muqUtilities target. -- Checking for dependency of muqUtilities on internal build of EIGEN3 -- Adding dependency of muqUtilities on EIGEN3 -- Checking for dependency of muqUtilities on internal build of HDF5 -- Checking for dependency of muqUtilities on internal build of PYTHON -- Checking for dependency of muqUtilities on internal build of BOOST -- Checking for dependency of muqUtilities on internal build of STANMATH -- Adding dependency of muqUtilities on STANMATH -- Checking for dependency of muqUtilities on internal build of NANOFLANN -- Adding dependency of muqUtilities on NANOFLANN -- Checking for dependency of muqUtilities on internal build of MODELING_CORE -- Checking for dependency of muqUtilities on internal build of UTILITIES_CORE -- Checking for dependency of muqUtilities on internal build of SUNDIALS -- Adding dependency of muqUtilities on SUNDIALS -- Checking for dependency of muqUtilities on internal build of NLOPT -- Creating pymuqUtilities target. -- Checking for dependency of pymuqUtilities on internal build of EIGEN3 -- Adding dependency of pymuqUtilities on EIGEN3 -- Checking for dependency of pymuqUtilities on internal build of HDF5 -- Checking for dependency of pymuqUtilities on internal build of PYTHON -- Checking for dependency of pymuqUtilities on internal build of BOOST -- Checking for dependency of pymuqUtilities on internal build of STANMATH -- Adding dependency of pymuqUtilities on STANMATH -- Checking for dependency of pymuqUtilities on internal build of NANOFLANN -- Adding dependency of pymuqUtilities on NANOFLANN -- Checking for dependency of pymuqUtilities on internal build of MODELING_CORE -- Checking for dependency of pymuqUtilities on internal build of UTILITIES_CORE -- Checking for dependency of pymuqUtilities on internal build of SUNDIALS -- Adding dependency of pymuqUtilities on SUNDIALS -- Checking for dependency of pymuqUtilities on internal build of NLOPT -- Creating muqModeling target. -- Checking for dependency of muqModeling on internal build of EIGEN3 -- Adding dependency of muqModeling on EIGEN3 -- Checking for dependency of muqModeling on internal build of HDF5 -- Checking for dependency of muqModeling on internal build of PYTHON -- Checking for dependency of muqModeling on internal build of BOOST -- Checking for dependency of muqModeling on internal build of STANMATH -- Adding dependency of muqModeling on STANMATH -- Checking for dependency of muqModeling on internal build of NANOFLANN -- Adding dependency of muqModeling on NANOFLANN -- Checking for dependency of muqModeling on internal build of MODELING_CORE -- Checking for dependency of muqModeling on internal build of UTILITIES_CORE -- Checking for dependency of muqModeling on internal build of SUNDIALS -- Adding dependency of muqModeling on SUNDIALS -- Checking for dependency of muqModeling on internal build of NLOPT -- Creating pymuqModeling_ target. -- Checking for dependency of pymuqModeling_ on internal build of EIGEN3 -- Adding dependency of pymuqModeling_ on EIGEN3 -- Checking for dependency of pymuqModeling_ on internal build of HDF5 -- Checking for dependency of pymuqModeling_ on internal build of PYTHON -- Checking for dependency of pymuqModeling_ on internal build of BOOST -- Checking for dependency of pymuqModeling_ on internal build of STANMATH -- Adding dependency of pymuqModeling_ on STANMATH -- Checking for dependency of pymuqModeling_ on internal build of NANOFLANN -- Adding dependency of pymuqModeling_ on NANOFLANN -- Checking for dependency of pymuqModeling_ on internal build of MODELING_CORE -- Checking for dependency of pymuqModeling_ on internal build of UTILITIES_CORE -- Checking for dependency of pymuqModeling_ on internal build of SUNDIALS -- Adding dependency of pymuqModeling_ on SUNDIALS -- Checking for dependency of pymuqModeling_ on internal build of NLOPT -- Creating muqOptimization target. -- Checking for dependency of muqOptimization on internal build of EIGEN3 -- Adding dependency of muqOptimization on EIGEN3 -- Checking for dependency of muqOptimization on internal build of HDF5 -- Checking for dependency of muqOptimization on internal build of PYTHON -- Checking for dependency of muqOptimization on internal build of BOOST -- Checking for dependency of muqOptimization on internal build of STANMATH -- Adding dependency of muqOptimization on STANMATH -- Checking for dependency of muqOptimization on internal build of NANOFLANN -- Adding dependency of muqOptimization on NANOFLANN -- Checking for dependency of muqOptimization on internal build of MODELING_CORE -- Checking for dependency of muqOptimization on internal build of UTILITIES_CORE -- Checking for dependency of muqOptimization on internal build of SUNDIALS -- Adding dependency of muqOptimization on SUNDIALS -- Checking for dependency of muqOptimization on internal build of NLOPT -- Creating pymuqOptimization target. -- Checking for dependency of pymuqOptimization on internal build of EIGEN3 -- Adding dependency of pymuqOptimization on EIGEN3 -- Checking for dependency of pymuqOptimization on internal build of HDF5 -- Checking for dependency of pymuqOptimization on internal build of PYTHON -- Checking for dependency of pymuqOptimization on internal build of BOOST -- Checking for dependency of pymuqOptimization on internal build of STANMATH -- Adding dependency of pymuqOptimization on STANMATH -- Checking for dependency of pymuqOptimization on internal build of NANOFLANN -- Adding dependency of pymuqOptimization on NANOFLANN -- Checking for dependency of pymuqOptimization on internal build of MODELING_CORE -- Checking for dependency of pymuqOptimization on internal build of UTILITIES_CORE -- Checking for dependency of pymuqOptimization on internal build of SUNDIALS -- Adding dependency of pymuqOptimization on SUNDIALS -- Checking for dependency of pymuqOptimization on internal build of NLOPT -- Creating muqApproximation target. -- Checking for dependency of muqApproximation on internal build of EIGEN3 -- Adding dependency of muqApproximation on EIGEN3 -- Checking for dependency of muqApproximation on internal build of HDF5 -- Checking for dependency of muqApproximation on internal build of PYTHON -- Checking for dependency of muqApproximation on internal build of BOOST -- Checking for dependency of muqApproximation on internal build of STANMATH -- Adding dependency of muqApproximation on STANMATH -- Checking for dependency of muqApproximation on internal build of NANOFLANN -- Adding dependency of muqApproximation on NANOFLANN -- Checking for dependency of muqApproximation on internal build of MODELING_CORE -- Checking for dependency of muqApproximation on internal build of UTILITIES_CORE -- Checking for dependency of muqApproximation on internal build of SUNDIALS -- Adding dependency of muqApproximation on SUNDIALS -- Checking for dependency of muqApproximation on internal build of NLOPT -- Creating pymuqApproximationWrappers target. -- Checking for dependency of pymuqApproximationWrappers on internal build of EIGEN3 -- Adding dependency of pymuqApproximationWrappers on EIGEN3 -- Checking for dependency of pymuqApproximationWrappers on internal build of HDF5 -- Checking for dependency of pymuqApproximationWrappers on internal build of PYTHON -- Checking for dependency of pymuqApproximationWrappers on internal build of BOOST -- Checking for dependency of pymuqApproximationWrappers on internal build of STANMATH -- Adding dependency of pymuqApproximationWrappers on STANMATH -- Checking for dependency of pymuqApproximationWrappers on internal build of NANOFLANN -- Adding dependency of pymuqApproximationWrappers on NANOFLANN -- Checking for dependency of pymuqApproximationWrappers on internal build of MODELING_CORE -- Checking for dependency of pymuqApproximationWrappers on internal build of UTILITIES_CORE -- Checking for dependency of pymuqApproximationWrappers on internal build of SUNDIALS -- Adding dependency of pymuqApproximationWrappers on SUNDIALS -- Checking for dependency of pymuqApproximationWrappers on internal build of NLOPT -- Creating muqSamplingAlgorithms target. -- Checking for dependency of muqSamplingAlgorithms on internal build of EIGEN3 -- Adding dependency of muqSamplingAlgorithms on EIGEN3 -- Checking for dependency of muqSamplingAlgorithms on internal build of HDF5 -- Checking for dependency of muqSamplingAlgorithms on internal build of PYTHON -- Checking for dependency of muqSamplingAlgorithms on internal build of BOOST -- Checking for dependency of muqSamplingAlgorithms on internal build of STANMATH -- Adding dependency of muqSamplingAlgorithms on STANMATH -- Checking for dependency of muqSamplingAlgorithms on internal build of NANOFLANN -- Adding dependency of muqSamplingAlgorithms on NANOFLANN -- Checking for dependency of muqSamplingAlgorithms on internal build of MODELING_CORE -- Checking for dependency of muqSamplingAlgorithms on internal build of UTILITIES_CORE -- Checking for dependency of muqSamplingAlgorithms on internal build of SUNDIALS -- Adding dependency of muqSamplingAlgorithms on SUNDIALS -- Checking for dependency of muqSamplingAlgorithms on internal build of NLOPT -- Creating pymuqSamplingAlgorithms target. -- Checking for dependency of pymuqSamplingAlgorithms on internal build of EIGEN3 -- Adding dependency of pymuqSamplingAlgorithms on EIGEN3 -- Checking for dependency of pymuqSamplingAlgorithms on internal build of HDF5 -- Checking for dependency of pymuqSamplingAlgorithms on internal build of PYTHON -- Checking for dependency of pymuqSamplingAlgorithms on internal build of BOOST -- Checking for dependency of pymuqSamplingAlgorithms on internal build of STANMATH -- Adding dependency of pymuqSamplingAlgorithms on STANMATH -- Checking for dependency of pymuqSamplingAlgorithms on internal build of NANOFLANN -- Adding dependency of pymuqSamplingAlgorithms on NANOFLANN -- Checking for dependency of pymuqSamplingAlgorithms on internal build of MODELING_CORE -- Checking for dependency of pymuqSamplingAlgorithms on internal build of UTILITIES_CORE -- Checking for dependency of pymuqSamplingAlgorithms on internal build of SUNDIALS -- Adding dependency of pymuqSamplingAlgorithms on SUNDIALS -- Checking for dependency of pymuqSamplingAlgorithms on internal build of NLOPT -- Creating muqInference target. -- Checking for dependency of muqInference on internal build of EIGEN3 -- Adding dependency of muqInference on EIGEN3 -- Checking for dependency of muqInference on internal build of HDF5 -- Checking for dependency of muqInference on internal build of PYTHON -- Checking for dependency of muqInference on internal build of BOOST -- Checking for dependency of muqInference on internal build of STANMATH -- Adding dependency of muqInference on STANMATH -- Checking for dependency of muqInference on internal build of NANOFLANN -- Adding dependency of muqInference on NANOFLANN -- Checking for dependency of muqInference on internal build of MODELING_CORE -- Checking for dependency of muqInference on internal build of UTILITIES_CORE -- Checking for dependency of muqInference on internal build of SUNDIALS -- Adding dependency of muqInference on SUNDIALS -- Checking for dependency of muqInference on internal build of NLOPT -- Thinking about connection between pymuqUtilities and muqUtilities -- Trying to add connection between pymuqUtilities and muqUtilities -- Thinking about connection between muqModeling and muqModeling -- Thinking about connection between muqModeling and muqUtilities -- Trying to add connection between muqModeling and muqUtilities -- Thinking about connection between muqModeling and muqModeling -- Thinking about connection between muqModeling and muqModeling -- Thinking about connection between muqModeling and muqModeling -- Thinking about connection between pymuqModeling_ and muqModeling -- Trying to add connection between pymuqModeling_ and muqModeling -- Thinking about connection between pymuqModeling_ and muqModeling -- Trying to add connection between pymuqModeling_ and muqModeling -- Thinking about connection between muqOptimization and muqModeling -- Trying to add connection between muqOptimization and muqModeling -- Thinking about connection between pymuqOptimization and muqOptimization -- Trying to add connection between pymuqOptimization and muqOptimization -- Thinking about connection between muqApproximation and muqUtilities -- Trying to add connection between muqApproximation and muqUtilities -- Thinking about connection between muqApproximation and muqModeling -- Trying to add connection between muqApproximation and muqModeling -- Thinking about connection between muqApproximation and muqModeling -- Trying to add connection between muqApproximation and muqModeling -- Thinking about connection between muqApproximation and muqApproximation -- Thinking about connection between muqApproximation and muqOptimization -- Trying to add connection between muqApproximation and muqOptimization -- Thinking about connection between muqApproximation and muqModeling -- Trying to add connection between muqApproximation and muqModeling -- Thinking about connection between muqApproximation and muqUtilities -- Trying to add connection between muqApproximation and muqUtilities -- Thinking about connection between muqApproximation and muqApproximation -- Thinking about connection between muqApproximation and muqUtilities -- Trying to add connection between muqApproximation and muqUtilities -- Thinking about connection between muqApproximation and muqModeling -- Trying to add connection between muqApproximation and muqModeling -- Thinking about connection between muqApproximation and muqApproximation -- Thinking about connection between muqApproximation and muqApproximation -- Thinking about connection between muqApproximation and muqModeling -- Trying to add connection between muqApproximation and muqModeling -- Thinking about connection between muqApproximation and muqModeling -- Trying to add connection between muqApproximation and muqModeling -- Thinking about connection between muqApproximation and muqApproximation -- Thinking about connection between muqApproximation and muqInference -- Trying to add connection between muqApproximation and muqInference -- Thinking about connection between pymuqApproximationWrappers and muqApproximation -- Trying to add connection between pymuqApproximationWrappers and muqApproximation -- Thinking about connection between pymuqApproximationWrappers and muqApproximation -- Trying to add connection between pymuqApproximationWrappers and muqApproximation -- Thinking about connection between muqSamplingAlgorithms and muqModeling -- Trying to add connection between muqSamplingAlgorithms and muqModeling -- Thinking about connection between muqSamplingAlgorithms and muqModeling -- Trying to add connection between muqSamplingAlgorithms and muqModeling -- Thinking about connection between muqSamplingAlgorithms and muqApproximation -- Trying to add connection between muqSamplingAlgorithms and muqApproximation -- Thinking about connection between muqSamplingAlgorithms and muqUtilities -- Trying to add connection between muqSamplingAlgorithms and muqUtilities -- Thinking about connection between muqSamplingAlgorithms and muqUtilities -- Trying to add connection between muqSamplingAlgorithms and muqUtilities -- Thinking about connection between muqSamplingAlgorithms and muqModeling -- Trying to add connection between muqSamplingAlgorithms and muqModeling -- Thinking about connection between muqSamplingAlgorithms and muqModeling -- Trying to add connection between muqSamplingAlgorithms and muqModeling -- Thinking about connection between muqSamplingAlgorithms and muqUtilities -- Trying to add connection between muqSamplingAlgorithms and muqUtilities -- Thinking about connection between muqSamplingAlgorithms and muqUtilities -- Trying to add connection between muqSamplingAlgorithms and muqUtilities -- Thinking about connection between muqSamplingAlgorithms and muqSamplingAlgorithms -- Thinking about connection between pymuqSamplingAlgorithms and muqSamplingAlgorithms -- Trying to add connection between pymuqSamplingAlgorithms and muqSamplingAlgorithms -- Thinking about connection between muqInference and muqModeling -- Trying to add connection between muqInference and muqModeling -- Performing Test HAS_PTHREAD -- Performing Test HAS_PTHREAD - Success UTILITIES_HDF5_TEST_SOURCES = modules/Utilities/test/HDF5/DatasetTests.cpp;modules/Utilities/test/HDF5/PathTests.cpp;modules/Utilities/test/HDF5/HDF5FileTest.cpp UTILITIES_MULTIINDEX_TEST_SOURCES = modules/Utilities/test/MultiIndices/MultiIndexTests.cpp;modules/Utilities/test/MultiIndices/MultiIndexSetTests.cpp;modules/Utilities/test/MultiIndices/MultiIndexLimiterTests.cpp UTILITIES_CORE_TEST_SOURCES = modules/Utilities/test/RandomGeneratorTest.cpp;modules/Utilities/test/AnyCastTest.cpp;modules/Utilities/test/StringUtilitiesTest.cpp;modules/Utilities/test/VectorSliceTest.cpp;modules/Utilities/test/Cereal/CerealizeEigenTests.cpp;modules/Utilities/test/Cereal/BoostAnyTests.cpp MODELING_CORE_TEST_SOURCES = modules/Modeling/test/WorkPieceTests.cpp;modules/Modeling/test/WorkGraphTests.cpp;modules/Modeling/test/WorkGraphPieceTests.cpp;modules/Modeling/test/ModGraphPieceTests.cpp;modules/Modeling/test/ModPieceTests.cpp;modules/Modeling/test/ConstantPieceTests.cpp;modules/Modeling/test/DerivativePieceTests.cpp;modules/Modeling/test/IdentityPieceTests.cpp;modules/Modeling/test/SplitVectorTests.cpp;modules/Modeling/test/ScaleVectorTests.cpp;modules/Modeling/test/CombineVectorsTests.cpp;modules/Modeling/test/SumPieceTests.cpp;modules/Modeling/test/MultiLogisticTest.cpp MODELING_STAN_TEST_SOURCES = modules/Modeling/test/CwiseOperatorTests/UnaryOperatorTest.cpp MODELING_FLANN_TEST_SOURCES = modules/Modeling/test/FlannTest/FlannCacheTests.cpp MODELING_LINEARALGEBRA_TEST_SOURCES = modules/Modeling/test/LinearAlgebra/LinearOperatorTests.cpp;modules/Modeling/test/LinearAlgebra/LyapunovSolverTests.cpp;modules/Modeling/test/LinearAlgebra/AffineOperatorTests.cpp;modules/Modeling/test/LinearAlgebra/LOBPCGTests.cpp;modules/Modeling/test/LinearAlgebra/StochasticEigenSolverTests.cpp;modules/Modeling/test/LinearAlgebra/SliceOperatorTests.cpp MODELING_SUNDIALS_MODELS_TEST_SOURCES = modules/Modeling/test/ODETests.cpp MODELING_DISTRIBUTIONS_TEST_SOURCES = modules/Modeling/test/DistributionsTests/DistributionTests.cpp;modules/Modeling/test/DistributionsTests/InverseGammaTests.cpp;modules/Modeling/test/DistributionsTests/UniformDistributionTests.cpp;modules/Modeling/test/DistributionsTests/GaussianDistributionTests.cpp;modules/Modeling/test/DistributionsTests/DensityProductTests.cpp OPTIMIZATION_CORE_TEST_SOURCES = modules/Optimization/test/OptimizationTests.cpp;modules/Optimization/test/CostFunctionTests.cpp;modules/Optimization/test/ModPieceCostFunctionTests.cpp APPROXIMATION_GP_Kernels_TEST_SOURCES = modules/Approximation/test/GaussianProcesses/KernelTests.cpp APPROXIMATION_GP_TEST_SOURCES = modules/Approximation/test/GaussianProcesses/GaussianProcessTests.cpp;modules/Approximation/test/GaussianProcesses/StateSpaceTests.cpp;modules/Approximation/test/GaussianProcesses/KarhunenLoeveTest.cpp APPROXIMATION_POLYNOMIALS_TEST_SOURCES = modules/Approximation/test/Polynomials/BasisExpansionTest.cpp;modules/Approximation/test/Polynomials/MonotoneExpansionTest.cpp;modules/Approximation/test/Polynomials/PolynomialTests.cpp APPROXIMATION_POLYNOMIALCHAOS_TEST_SOURCES = modules/Approximation/test/PolynomialChaos/PCEFactoryTest.cpp;modules/Approximation/test/PolynomialChaos/PolynomialChaosExpansionTest.cpp;modules/Approximation/test/PolynomialChaos/AdaptiveSmolyakPCETest.cpp;modules/Approximation/test/Quadrature/AdaptiveSmolyakQuadratureTest.cpp APPROXIMATION_QUADRATURE_TEST_SOURCES = modules/Approximation/test/Quadrature/GaussQuadratureTests.cpp;modules/Approximation/test/Quadrature/FullTensorQuadratureTest.cpp;modules/Approximation/test/Quadrature/ClenshawCurtisTests.cpp APPROXIMATION_REGRESSION_TEST_SOURCES = modules/Approximation/test/RegressionTests/RegressionTests.cpp;modules/Approximation/test/RegressionTests/LocalRegressionTests.cpp SAMPLING_ALGORITHM_TEST_SOURCES = modules/SamplingAlgorithms/test/SampleCollectionTests.cpp;modules/SamplingAlgorithms/test/MarkovChainTests.cpp;modules/SamplingAlgorithms/test/MIMCMCTests.cpp;modules/SamplingAlgorithms/test/MLMCMCTests.cpp;modules/SamplingAlgorithms/test/GMHKernelTests.cpp;modules/SamplingAlgorithms/test/ImportanceSamplingTests.cpp;modules/SamplingAlgorithms/test/MCMCTests.cpp;modules/SamplingAlgorithms/test/DelayedRejectionTests.cpp;modules/SamplingAlgorithms/test/DILITests.cpp;modules/SamplingAlgorithms/test/CrankNicolsonTests.cpp;modules/SamplingAlgorithms/test/InfMALATests.cpp SAMPLING_PROBLEMS_TEST_SOURCES = modules/SamplingAlgorithms/test/SamplingProblemTests.cpp FANCY_SAMPLING_PROBLEMS_TEST_SOURCES = modules/SamplingAlgorithms/test/ExpensiveSamplingProblemTests.cpp INFERENCE_FILTERING_TEST_SOURCES = modules/Inference/test/Filtering/KalmanFilterTest.cpp ALL LIBS = muqUtilities;muqModeling;muqOptimization;muqApproximation;muqSamplingAlgorithms;muqInference ALL TEST SOURCES = modules/RunTests.cpp;modules/Utilities/test/HDF5/DatasetTests.cpp;modules/Utilities/test/HDF5/PathTests.cpp;modules/Utilities/test/HDF5/HDF5FileTest.cpp;modules/Utilities/test/MultiIndices/MultiIndexTests.cpp;modules/Utilities/test/MultiIndices/MultiIndexSetTests.cpp;modules/Utilities/test/MultiIndices/MultiIndexLimiterTests.cpp;modules/Utilities/test/RandomGeneratorTest.cpp;modules/Utilities/test/AnyCastTest.cpp;modules/Utilities/test/StringUtilitiesTest.cpp;modules/Utilities/test/VectorSliceTest.cpp;modules/Utilities/test/Cereal/CerealizeEigenTests.cpp;modules/Utilities/test/Cereal/BoostAnyTests.cpp;modules/Modeling/test/WorkPieceTests.cpp;modules/Modeling/test/WorkGraphTests.cpp;modules/Modeling/test/WorkGraphPieceTests.cpp;modules/Modeling/test/ModGraphPieceTests.cpp;modules/Modeling/test/ModPieceTests.cpp;modules/Modeling/test/ConstantPieceTests.cpp;modules/Modeling/test/DerivativePieceTests.cpp;modules/Modeling/test/IdentityPieceTests.cpp;modules/Modeling/test/SplitVectorTests.cpp;modules/Modeling/test/ScaleVectorTests.cpp;modules/Modeling/test/CombineVectorsTests.cpp;modules/Modeling/test/SumPieceTests.cpp;modules/Modeling/test/MultiLogisticTest.cpp;modules/Modeling/test/CwiseOperatorTests/UnaryOperatorTest.cpp;modules/Modeling/test/FlannTest/FlannCacheTests.cpp;modules/Modeling/test/LinearAlgebra/LinearOperatorTests.cpp;modules/Modeling/test/LinearAlgebra/LyapunovSolverTests.cpp;modules/Modeling/test/LinearAlgebra/AffineOperatorTests.cpp;modules/Modeling/test/LinearAlgebra/LOBPCGTests.cpp;modules/Modeling/test/LinearAlgebra/StochasticEigenSolverTests.cpp;modules/Modeling/test/LinearAlgebra/SliceOperatorTests.cpp;modules/Modeling/test/ODETests.cpp;modules/Modeling/test/DistributionsTests/DistributionTests.cpp;modules/Modeling/test/DistributionsTests/InverseGammaTests.cpp;modules/Modeling/test/DistributionsTests/UniformDistributionTests.cpp;modules/Modeling/test/DistributionsTests/GaussianDistributionTests.cpp;modules/Modeling/test/DistributionsTests/DensityProductTests.cpp;modules/Optimization/test/OptimizationTests.cpp;modules/Optimization/test/CostFunctionTests.cpp;modules/Optimization/test/ModPieceCostFunctionTests.cpp;modules/Approximation/test/GaussianProcesses/KernelTests.cpp;modules/Approximation/test/GaussianProcesses/GaussianProcessTests.cpp;modules/Approximation/test/GaussianProcesses/StateSpaceTests.cpp;modules/Approximation/test/GaussianProcesses/KarhunenLoeveTest.cpp;modules/Approximation/test/Polynomials/BasisExpansionTest.cpp;modules/Approximation/test/Polynomials/MonotoneExpansionTest.cpp;modules/Approximation/test/Polynomials/PolynomialTests.cpp;modules/Approximation/test/PolynomialChaos/PCEFactoryTest.cpp;modules/Approximation/test/PolynomialChaos/PolynomialChaosExpansionTest.cpp;modules/Approximation/test/PolynomialChaos/AdaptiveSmolyakPCETest.cpp;modules/Approximation/test/Quadrature/AdaptiveSmolyakQuadratureTest.cpp;modules/Approximation/test/Quadrature/GaussQuadratureTests.cpp;modules/Approximation/test/Quadrature/FullTensorQuadratureTest.cpp;modules/Approximation/test/Quadrature/ClenshawCurtisTests.cpp;modules/Approximation/test/RegressionTests/RegressionTests.cpp;modules/Approximation/test/RegressionTests/LocalRegressionTests.cpp;modules/SamplingAlgorithms/test/SampleCollectionTests.cpp;modules/SamplingAlgorithms/test/MarkovChainTests.cpp;modules/SamplingAlgorithms/test/MIMCMCTests.cpp;modules/SamplingAlgorithms/test/MLMCMCTests.cpp;modules/SamplingAlgorithms/test/GMHKernelTests.cpp;modules/SamplingAlgorithms/test/ImportanceSamplingTests.cpp;modules/SamplingAlgorithms/test/MCMCTests.cpp;modules/SamplingAlgorithms/test/DelayedRejectionTests.cpp;modules/SamplingAlgorithms/test/DILITests.cpp;modules/SamplingAlgorithms/test/CrankNicolsonTests.cpp;modules/SamplingAlgorithms/test/InfMALATests.cpp;modules/SamplingAlgorithms/test/SamplingProblemTests.cpp;modules/SamplingAlgorithms/test/ExpensiveSamplingProblemTests.cpp;modules/Inference/test/Filtering/KalmanFilterTest.cpp MUQ_LINK_LIBS = /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/muq_external/lib/libsundials_cvodes.so;/jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/muq_external/lib/libsundials_idas.so;/jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/muq_external/lib/libsundials_kinsol.so;/jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/muq_external/lib/libsundials_nvecserial.so;/usr/lib/x86_64-linux-gnu/libnlopt.so;/usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so;/usr/lib/x86_64-linux-gnu/hdf5/serial/lib/libhdf5_hl.so;/usr/lib/x86_64-linux-gnu/libboost_system.so;/usr/lib/x86_64-linux-gnu/libboost_filesystem.so;/usr/lib/x86_64-linux-gnu/libboost_graph.so -- Storing MUQ_COMPILE_DEFINITIONS = -- MUQ_LIBRARIES = muqUtilities;muqModeling;muqOptimization;muqApproximation;muqSamplingAlgorithms;muqInference -- MUQ_EXPORT_LIBRARIES = /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/lib/libmuqUtilities.so;/jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/lib/libmuqModeling.so;/jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/lib/libmuqOptimization.so;/jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/lib/libmuqApproximation.so;/jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/lib/libmuqSamplingAlgorithms.so;/jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/lib/libmuqInference.so ############################################# # # MUQ configuration: # CMAKE_BUILD_TYPE: Release # BUILD_SHARED_LIBS: # BUILD_STATIC_LIBS: # CMAKE_INSTALL_PREFIX: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install # CMAKE_SOURCE_DIR: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds # CMAKE_BINARY_DIR: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/build # CMAKE_CXX_COMPILER name: GNU 5.5.0 on platform Linux x86_64 # CMAKE_CXX_COMPILER path: /usr/bin/g++ # # Compiler flags used for this build: # CMAKE_CXX_FLAGS: -g -std=c++11 -Wall -g -Wno-maybe-uninitialized -Wno-sign-compare -Wno-unknown-pragmas -Wno-unused-variable -Wno-unused-local-typedefs -DGTEST_USE_OWN_TR1_TUPLE=1 -pthread -O3 -msse4 -mavx # # Compiler definitions used for this build: # COMPILE_DEFINITIONS: # # Required dependencies: # EIGEN3 ---------------> Met with internal build -- Could not find library. # # BOOST ----------------> Met with existing library: # Include Directory: # /usr/include # Libraries: # /usr/lib/x86_64-linux-gnu/libboost_system.so # /usr/lib/x86_64-linux-gnu/libboost_filesystem.so # /usr/lib/x86_64-linux-gnu/libboost_graph.so # # HDF5 -----------------> Met with existing library: # Include Directory: # /usr/include/hdf5/serial # Libraries: # /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so # /usr/lib/x86_64-linux-gnu/hdf5/serial/lib/libhdf5_hl.so # # NANOFLANN ----------------> Met with internal build -- Could not find library. # # SUNDIALS -------------> Met with internal build -- Could not find library. # # NLOPT ----------------> Met with existing library: # Include Directory: # /usr/include # Libraries: # /usr/lib/x86_64-linux-gnu/libnlopt.so # # PARCER ---------------> Not required for selected compile groups. # # # Optional dependencies: # GTEST ----------------> ON. # Include Directory: # /home/mparno/util/gtest_install/include # Libraries: # /home/mparno/util/gtest_install/lib/libgtest.a # # # Optional tools: # MPI: -----------------> OFF # # MUQ Modules: # Utilities: # pyUtilities: # Modeling: # pyModeling_: # Optimization: # pyOptimization: # Approximation: # pyApproximationWrappers: # SamplingAlgorithms: # pySamplingAlgorithms: # Inference: # # MUQ Libraries: # muqUtilities;muqModeling;muqOptimization;muqApproximation;muqSamplingAlgorithms;muqInference ############################################# -- Found Doxygen: /usr/bin/doxygen (found version "1.8.11") -- To build documentation, run 'make doc' -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: BOOST_EXTERNAL_SOURCE HDF5_EXTERNAL_SOURCE NLOPT_EXTERNAL_SOURCE -- Build files have been written to: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/build + make install Install shared components Install NVECTOR_SERIAL Install ARKODE Install CVODES Install IDAS Install KINSOL /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/modules/Modeling/src/WorkGraph.cpp: In member function ‘void muq::Modeling::WorkGraph::Visualize(const string&) const’: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/modules/Modeling/src/WorkGraph.cpp:917:93: warning: ignoring return value of ‘int system(const char*)’, declared with attribute warn_unused_result [-Wunused-result] std::system(("dot -T" + *(strs.end() - 1) + " " + tempname + " -o " + filename).c_str()); ^ /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/modules/Modeling/src/WorkGraph.cpp:920:42: warning: ignoring return value of ‘int system(const char*)’, declared with attribute warn_unused_result [-Wunused-result] std::system(("rm "+tempname).c_str()); ^ /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/modules/Approximation/src/GaussianProcesses/GaussianProcess.cpp: In member function ‘virtual void muq::Approximation::GaussianProcess::Optimize()’: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/modules/Approximation/src/GaussianProcesses/GaussianProcess.cpp:164:13: warning: variable ‘info’ set but not used [-Wunused-but-set-variable] OptInfo info; ^ In file included from /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/modules/SamplingAlgorithms/src/GreedyMLMCMC.cpp:1:0: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/./MUQ/SamplingAlgorithms/GreedyMLMCMC.h: In constructor ‘muq::SamplingAlgorithms::GreedyMLMCMC::GreedyMLMCMC(boost::property_tree::ptree, std::shared_ptr<muq::SamplingAlgorithms::MIComponentFactory>)’: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/./MUQ/SamplingAlgorithms/GreedyMLMCMC.h:42:17: warning: ‘muq::SamplingAlgorithms::GreedyMLMCMC::numInitialSamples’ will be initialized after [-Wreorder] const int numInitialSamples; ^ /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/./MUQ/SamplingAlgorithms/GreedyMLMCMC.h:38:20: warning: ‘const double muq::SamplingAlgorithms::GreedyMLMCMC::e’ [-Wreorder] const double e; ^ /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/modules/SamplingAlgorithms/src/GreedyMLMCMC.cpp:6:5: warning: when initialized here [-Wreorder] GreedyMLMCMC::GreedyMLMCMC (pt::ptree pt, std::shared_ptr<MIComponentFactory> componentFactory) ^ In file included from /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/modules/SamplingAlgorithms/src/MIMCMC.cpp:1:0: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/./MUQ/SamplingAlgorithms/MIMCMC.h: In constructor ‘muq::SamplingAlgorithms::MIMCMC::MIMCMC(boost::property_tree::ptree, std::shared_ptr<muq::SamplingAlgorithms::MIComponentFactory>)’: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/./MUQ/SamplingAlgorithms/MIMCMC.h:62:17: warning: ‘muq::SamplingAlgorithms::MIMCMC::pt’ will be initialized after [-Wreorder] pt::ptree pt; ^ /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/modules/SamplingAlgorithms/src/MIMCMC.cpp:9:40: warning: base ‘muq::SamplingAlgorithms::SamplingAlgorithm’ [-Wreorder] componentFactory(componentFactory) ^ /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/modules/SamplingAlgorithms/src/MIMCMC.cpp:6:5: warning: when initialized here [-Wreorder] MIMCMC::MIMCMC (pt::ptree pt, std::shared_ptr<MIComponentFactory> componentFactory) ^ + make examples + tail -200 OutputFromMake.txt -- Up-to-date: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/include/MUQ/Modeling/LinearAlgebra/EigenMatrixAlgebra.h -- Up-to-date: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/include/MUQ/Modeling/LinearAlgebra/ScalarAlgebra.h -- Up-to-date: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/include/MUQ/Modeling/LinearAlgebra/DiagonalOperator.h -- Up-to-date: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/include/MUQ/Modeling/LinearAlgebra/LinearOperator.h -- Up-to-date: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/include/MUQ/Modeling/LinearAlgebra/CompanionMatrix.h -- Up-to-date: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/include/MUQ/Modeling/LinearAlgebra/ZeroOperator.h -- Up-to-date: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/include/MUQ/Modeling/LinearAlgebra/IdentityOperator.h -- Up-to-date: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/include/MUQ/Modeling/LinearAlgebra/LOBPCG.h -- Up-to-date: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/include/MUQ/Modeling/LinearAlgebra/ProductOperator.h -- Up-to-date: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/include/MUQ/Modeling/LinearAlgebra/EigenVectorAlgebra.h -- Up-to-date: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/include/MUQ/Modeling/LinearAlgebra/SparseLinearOperator.h -- Up-to-date: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/include/MUQ/Modeling/LinearAlgebra/HessianOperator.h -- Up-to-date: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/include/MUQ/Modeling/LinearAlgebra/BlockDiagonalOperator.h -- Up-to-date: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/include/MUQ/Modeling/LinearAlgebra/ConcatenateOperator.h -- Up-to-date: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/include/MUQ/Modeling/LinearAlgebra/GaussNewtonOperator.h -- Up-to-date: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/include/MUQ/Modeling/LinearAlgebra/GeneralizedEigenSolver.h -- Up-to-date: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/include/MUQ/Modeling/LinearAlgebra/AnyVec.h -- Up-to-date: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/include/MUQ/Modeling/LinearAlgebra/BlockRowOperator.h -- Up-to-date: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/include/MUQ/Modeling/LinearAlgebra/AnyAlgebra.h -- Up-to-date: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/include/MUQ/Modeling/LinearAlgebra/StochasticEigenSolver.h -- Up-to-date: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/include/MUQ/Modeling/LinearAlgebra/EigenLinearOperator.h -- Up-to-date: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/include/MUQ/Modeling/LinearAlgebra/SundialsAlgebra.h -- Up-to-date: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/include/MUQ/Modeling/LinearAlgebra/LyapunovSolver.h -- Up-to-date: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/include/MUQ/Modeling/ScaleVector.h -- Up-to-date: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/include/MUQ/Modeling/ConstantVector.h -- Up-to-date: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/include/MUQ/Modeling/MultiLogisticLikelihood.h -- Up-to-date: 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Up-to-date: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/include/MUQ/Utilities/Cereal/BoostAnySerializer.h -- Up-to-date: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/include/MUQ/Utilities/WaitBar.h -- Up-to-date: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/include/MUQ/Utilities/StringUtilities.h -- Up-to-date: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/include/MUQ/Utilities/MultiIndices -- Up-to-date: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/include/MUQ/Utilities/MultiIndices/MultiIndexSet.h -- Up-to-date: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/include/MUQ/Utilities/MultiIndices/MultiIndex.h -- Up-to-date: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/include/MUQ/Utilities/MultiIndices/MultiIndexLimiter.h -- Up-to-date: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/include/MUQ/Utilities/MultiIndices/MultiIndexFactory.h -- Up-to-date: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/include/MUQ/Utilities/RegisterClassName.h -- Up-to-date: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/include/MUQ/Utilities/VectorSlice.h -- Up-to-date: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/include/MUQ/Utilities/PyDictConversion.h -- Up-to-date: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/include/MUQ/Utilities/RandomGenerator.h -- Up-to-date: /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/include/MUQ/config.h [ 4%] Built target STANMATH [ 9%] Built target NANOFLANN [ 14%] Built target SUNDIALS [ 18%] Built target EIGEN3 [ 25%] Built target muqUtilities [ 53%] Built target muqModeling [ 56%] Built target muqOptimization [ 57%] Built target muqInference [ 76%] Built target muqApproximation [ 93%] Built target muqSamplingAlgorithms Scanning dependencies of target SimpleReadWrite [ 93%] Building CXX object examples/Utilities/HDF5/SimpleReadWrite/CMakeFiles/SimpleReadWrite.dir/SimpleReadWrite.cpp.o [ 93%] Linking CXX executable SimpleReadWrite [ 93%] Built target SimpleReadWrite Scanning dependencies of target GaussianProcess_CO2_exe [ 93%] Building CXX object examples/Approximation/GaussianProcess_CO2/CMakeFiles/GaussianProcess_CO2_exe.dir/GaussianProcess_CO2.cpp.o [ 93%] Linking CXX executable GaussianProcess_CO2_exe [ 93%] Built target GaussianProcess_CO2_exe Scanning dependencies of target MonotoneRegression [ 93%] Building CXX object examples/Approximation/MonotoneRegression/CMakeFiles/MonotoneRegression.dir/MonotoneRegression.cpp.o [ 95%] Linking CXX executable MonotoneRegression [ 95%] Built target MonotoneRegression Scanning dependencies of target GaussianSampling [ 96%] Building CXX object examples/SamplingAlgorithms/MCMC/Example1_Gaussian/cpp/CMakeFiles/GaussianSampling.dir/GaussianSampling.cpp.o [ 96%] Linking CXX executable GaussianSampling [ 96%] Built target GaussianSampling Scanning dependencies of target GaussianGammaSampling [ 96%] Building CXX object examples/SamplingAlgorithms/MCMC/Example2_GaussianInverseGamma/CMakeFiles/GaussianGammaSampling.dir/GaussianGammaSampling.cpp.o [ 98%] Linking CXX executable GaussianGammaSampling [ 98%] Built target GaussianGammaSampling Scanning dependencies of target MultilevelGaussianSampling [100%] Building CXX object examples/SamplingAlgorithms/MCMC/Example3_MultilevelGaussian/cpp/CMakeFiles/MultilevelGaussianSampling.dir/MultilevelGaussianSampling.cpp.o [100%] Linking CXX executable MultilevelGaussianSampling [100%] Built target MultilevelGaussianSampling Scanning dependencies of target MultiindexGaussianSampling [100%] Building CXX object examples/SamplingAlgorithms/MCMC/Example4_MultiindexGaussian/cpp/CMakeFiles/MultiindexGaussianSampling.dir/MultiindexGaussianSampling.cpp.o [100%] Linking CXX executable MultiindexGaussianSampling [100%] Built target MultiindexGaussianSampling Scanning dependencies of target BlockOperations [100%] Building CXX object examples/Utilities/HDF5/BlockOperations/CMakeFiles/BlockOperations.dir/BlockOperations.cpp.o [100%] Linking CXX executable BlockOperations [100%] Built target BlockOperations Scanning dependencies of target examples [100%] Built target examples + cd /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds + exit 0 + bash -ex SupportScripts/Jenkins/acdlRunScript.sh + shopt -s nocasematch ++ pwd + dir=/jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds ++ echo /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds ++ tr '[:lower:]' '[:upper:]' + bin_dir=/JENKINS/WORKSPACE/MUQ2_NIGHTLY/PYVERSION/PYTHON3/LABEL/REYNOLDS + echo /JENKINS/WORKSPACE/MUQ2_NIGHTLY/PYVERSION/PYTHON3/LABEL/REYNOLDS + grep -q PYTHON + with_python=1 ++ hostname + [[ reynolds == \m\a\c\y\s\.\m\i\t\.\e\d\u ]] ++ hostname + [[ -n reynolds==reynolds.mit.edu ]] + export LD_LIBRARY_PATH=:/jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/lib:/jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/muq_external/lib + LD_LIBRARY_PATH=:/jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/lib:/jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/muq_external/lib + PYTEST=/usr/local/bin/py.test + build/RunAllTests --gtest_output=xml:build/TestResults.xml [==========] Running 330 tests from 61 test suites. [----------] Global test environment set-up. [----------] 13 tests from DatasetTest [ RUN ] DatasetTest.Groups [ OK ] DatasetTest.Groups (4 ms) [ RUN ] DatasetTest.DoubleSetGet [ OK ] DatasetTest.DoubleSetGet (2 ms) [ RUN ] DatasetTest.CopyDataset [ OK ] DatasetTest.CopyDataset (2 ms) [ RUN ] DatasetTest.CopyDatasetWithAttribute [ OK ] DatasetTest.CopyDatasetWithAttribute (3 ms) [ RUN ] DatasetTest.CopyGroup [ OK ] DatasetTest.CopyGroup (2 ms) [ RUN ] DatasetTest.AttributeSetGet [ OK ] DatasetTest.AttributeSetGet (2 ms) [ RUN ] DatasetTest.BlockReadOps [ OK ] DatasetTest.BlockReadOps (3 ms) [ RUN ] DatasetTest.BlockWriteOps [ OK ] DatasetTest.BlockWriteOps (2 ms) [ RUN ] DatasetTest.IntSetGet [ OK ] DatasetTest.IntSetGet (1 ms) [ RUN ] DatasetTest.CloseOpen [ OK ] DatasetTest.CloseOpen (3 ms) [ RUN ] DatasetTest.GroupSizeFail [ OK ] DatasetTest.GroupSizeFail (1 ms) [ RUN ] DatasetTest.CreateDataset [ OK ] DatasetTest.CreateDataset (2 ms) [ RUN ] DatasetTest.FromH5File [ OK ] DatasetTest.FromH5File (1 ms) [----------] 13 tests from DatasetTest (29 ms total) [----------] 1 test from Paths [ RUN ] Paths.GetParent [ OK ] Paths.GetParent (0 ms) [----------] 1 test from Paths (0 ms total) [----------] 7 tests from HDF5FileTest [ RUN ] HDF5FileTest.ReadWrite [ OK ] HDF5FileTest.ReadWrite (1 ms) [ RUN ] HDF5FileTest.ChildList [ OK ] HDF5FileTest.ChildList (1 ms) [ RUN ] HDF5FileTest.MultiLevelGroup [ OK ] HDF5FileTest.MultiLevelGroup (2 ms) [ RUN ] HDF5FileTest.Attributes [ OK ] HDF5FileTest.Attributes (1 ms) [ RUN ] HDF5FileTest.WritePartial1 [ OK ] HDF5FileTest.WritePartial1 (1 ms) [ RUN ] HDF5FileTest.WritePartial2 [ OK ] HDF5FileTest.WritePartial2 (1 ms) [ RUN ] HDF5FileTest.MergeFiles [ OK ] HDF5FileTest.MergeFiles (2 ms) [----------] 7 tests from HDF5FileTest (9 ms total) [----------] 15 tests from Utilities_MultiIndices [ RUN ] Utilities_MultiIndices.DefaultConstructor [ OK ] Utilities_MultiIndices.DefaultConstructor (0 ms) [ RUN ] Utilities_MultiIndices.CreateVector [ OK ] Utilities_MultiIndices.CreateVector (0 ms) [ RUN ] Utilities_MultiIndices.RowConstructor [ OK ] Utilities_MultiIndices.RowConstructor (0 ms) [ RUN ] Utilities_MultiIndices.InitializerListConstructor [ OK ] Utilities_MultiIndices.InitializerListConstructor (0 ms) [ RUN ] Utilities_MultiIndices.Equality [ OK ] Utilities_MultiIndices.Equality (0 ms) [ RUN ] Utilities_MultiIndices.SetValue [ OK ] Utilities_MultiIndices.SetValue (0 ms) [ RUN ] Utilities_MultiIndices.AdditionOperators [ OK ] Utilities_MultiIndices.AdditionOperators (0 ms) [ RUN ] Utilities_MultiIndices.SubtractionOperators [ OK ] Utilities_MultiIndices.SubtractionOperators (0 ms) [ RUN ] Utilities_MultiIndices.ValidNeighbor [ OK ] Utilities_MultiIndices.ValidNeighbor (0 ms) [ RUN ] Utilities_MultiIndices.UndefinedNeighbor [ OK ] Utilities_MultiIndices.UndefinedNeighbor (0 ms) [ RUN ] Utilities_MultiIndices.OutsideMaxOrder [ OK ] Utilities_MultiIndices.OutsideMaxOrder (0 ms) [ RUN ] Utilities_MultiIndices.OutsideTotalOrder [ OK ] Utilities_MultiIndices.OutsideTotalOrder (0 ms) [ RUN ] Utilities_MultiIndices.AddAdmissibleNeighbor [ OK ] Utilities_MultiIndices.AddAdmissibleNeighbor (0 ms) [ RUN ] Utilities_MultiIndices.BackwardsNeighbors [ OK ] Utilities_MultiIndices.BackwardsNeighbors (1 ms) [ RUN ] Utilities_MultiIndices.Expand [ OK ] Utilities_MultiIndices.Expand (0 ms) [----------] 15 tests from Utilities_MultiIndices (1 ms total) [----------] 6 tests from Utilities_MultiIndicies [ RUN ] Utilities_MultiIndicies.MaxLimiter [ OK ] Utilities_MultiIndicies.MaxLimiter (0 ms) [ RUN ] Utilities_MultiIndicies.TotalLimiter [ OK ] Utilities_MultiIndicies.TotalLimiter (0 ms) [ RUN ] Utilities_MultiIndicies.AndLimiter [ OK ] Utilities_MultiIndicies.AndLimiter (0 ms) [ RUN ] Utilities_MultiIndicies.OrLimiter [ OK ] Utilities_MultiIndicies.OrLimiter (0 ms) [ RUN ] Utilities_MultiIndicies.XorLimiter [ OK ] Utilities_MultiIndicies.XorLimiter (0 ms) [ RUN ] Utilities_MultiIndicies.ValidDimensionLimiter [ OK ] Utilities_MultiIndicies.ValidDimensionLimiter (0 ms) [----------] 6 tests from Utilities_MultiIndicies (0 ms total) [----------] 8 tests from UtilitiesRandomGenerator [ RUN ] UtilitiesRandomGenerator.UniformReal [ OK ] UtilitiesRandomGenerator.UniformReal (3 ms) [ RUN ] UtilitiesRandomGenerator.Gaussian [ OK ] UtilitiesRandomGenerator.Gaussian (16 ms) [ RUN ] UtilitiesRandomGenerator.UniformRealInt [ OK ] UtilitiesRandomGenerator.UniformRealInt (3 ms) [ RUN ] UtilitiesRandomGenerator.SeedResetTest [ OK ] UtilitiesRandomGenerator.SeedResetTest (0 ms) [ RUN ] UtilitiesRandomGenerator.SeedTempSet [ OK ] UtilitiesRandomGenerator.SeedTempSet (0 ms) [ RUN ] UtilitiesRandomGenerator.Discrete [ OK ] UtilitiesRandomGenerator.Discrete (1 ms) [ RUN ] UtilitiesRandomGenerator.Gamma [ OK ] UtilitiesRandomGenerator.Gamma (2 ms) [ RUN ] UtilitiesRandomGenerator.StoreRng [ OK ] UtilitiesRandomGenerator.StoreRng (0 ms) [----------] 8 tests from UtilitiesRandomGenerator (25 ms total) [----------] 2 tests from UtilitiesAnyHelpers [ RUN ] UtilitiesAnyHelpers.AnyCast [ OK ] UtilitiesAnyHelpers.AnyCast (0 ms) [ RUN ] UtilitiesAnyHelpers.AnyConstCast [ OK ] UtilitiesAnyHelpers.AnyConstCast (0 ms) [----------] 2 tests from UtilitiesAnyHelpers (0 ms total) [----------] 4 tests from Utilities [ RUN ] Utilities.StringStrip [ OK ] Utilities.StringStrip (0 ms) [ RUN ] Utilities.StringSplit [ OK ] Utilities.StringSplit (0 ms) [ RUN ] Utilities.VectorSlice_Eigen [ OK ] Utilities.VectorSlice_Eigen (0 ms) [ RUN ] Utilities.VectorSlice_StdVec [ OK ] Utilities.VectorSlice_StdVec (0 ms) [----------] 4 tests from Utilities (0 ms total) [----------] 22 tests from WorkPieceTests [ RUN ] WorkPieceTests.Unfixed [ OK ] WorkPieceTests.Unfixed (0 ms) [ RUN ] WorkPieceTests.FixedInputNum [ OK ] WorkPieceTests.FixedInputNum (0 ms) [ RUN ] WorkPieceTests.FixedOutputNum [ OK ] WorkPieceTests.FixedOutputNum (0 ms) [ RUN ] WorkPieceTests.FixedInputOutputNum [ OK ] WorkPieceTests.FixedInputOutputNum (0 ms) [ RUN ] WorkPieceTests.FixedInputTypes [ OK ] WorkPieceTests.FixedInputTypes (0 ms) [ RUN ] WorkPieceTests.FixedOutputTypes [ OK ] WorkPieceTests.FixedOutputTypes (0 ms) [ RUN ] WorkPieceTests.SomeFixedInputTypes [ OK ] WorkPieceTests.SomeFixedInputTypes (0 ms) [ RUN ] WorkPieceTests.SomeFixedOutputTypes [ OK ] WorkPieceTests.SomeFixedOutputTypes (0 ms) [ RUN ] WorkPieceTests.SomeFixedInputTypesFixedInputNum [ OK ] WorkPieceTests.SomeFixedInputTypesFixedInputNum (0 ms) [ RUN ] WorkPieceTests.SomeFixedInputTypesFixedOutputNum [ OK ] WorkPieceTests.SomeFixedInputTypesFixedOutputNum (0 ms) [ RUN ] WorkPieceTests.SomeFixedOutputTypesFixedInputNumber [ OK ] WorkPieceTests.SomeFixedOutputTypesFixedInputNumber (0 ms) [ RUN ] WorkPieceTests.SomeFixedOutputTypesFixedOutputNumber [ OK ] WorkPieceTests.SomeFixedOutputTypesFixedOutputNumber (0 ms) [ RUN ] WorkPieceTests.FixedInputTypesFixedOutputNum [ OK ] WorkPieceTests.FixedInputTypesFixedOutputNum (0 ms) [ RUN ] WorkPieceTests.FixedOutputTypesFixedInputNum [ OK ] WorkPieceTests.FixedOutputTypesFixedInputNum (0 ms) [ RUN ] WorkPieceTests.SomeFixedInputTypesFixedInputOutputNum [ OK ] WorkPieceTests.SomeFixedInputTypesFixedInputOutputNum (0 ms) [ RUN ] WorkPieceTests.SomeFixedOutputTypesFixedInputOutputNumber [ OK ] WorkPieceTests.SomeFixedOutputTypesFixedInputOutputNumber (0 ms) [ RUN ] WorkPieceTests.FixedTypes [ OK ] WorkPieceTests.FixedTypes (0 ms) [ RUN ] WorkPieceTests.SomeFixedInputTypesFixedOutputTypes [ OK ] WorkPieceTests.SomeFixedInputTypesFixedOutputTypes (0 ms) [ RUN ] WorkPieceTests.SomeFixedInputTypesFixedInputNumFixedOutputTypes [ OK ] WorkPieceTests.SomeFixedInputTypesFixedInputNumFixedOutputTypes (0 ms) [ RUN ] WorkPieceTests.FixedInputTypesSomeFixedOutputTypes [ OK ] WorkPieceTests.FixedInputTypesSomeFixedOutputTypes (0 ms) [ RUN ] WorkPieceTests.FixedInputTypesSomeFixedOutputTypesFixedOutputNum [ OK ] WorkPieceTests.FixedInputTypesSomeFixedOutputTypesFixedOutputNum (0 ms) [ RUN ] WorkPieceTests.SomeFixedInOuts [ OK ] WorkPieceTests.SomeFixedInOuts (0 ms) [----------] 22 tests from WorkPieceTests (0 ms total) [----------] 10 tests from WorkGraphTests [ RUN ] WorkGraphTests.UnfixedInOut sh: 1: dot: not found rm: cannot remove 'modules/Modeling/test/WorkGraphVisualizations/UnfixedInOut_temp.dot': No such file or directory [ OK ] WorkGraphTests.UnfixedInOut (4 ms) [ RUN ] WorkGraphTests.NodeLookup [ OK ] WorkGraphTests.NodeLookup (0 ms) [ RUN ] WorkGraphTests.EdgeFinding [ OK ] WorkGraphTests.EdgeFinding (0 ms) [ RUN ] WorkGraphTests.ParentsAndChildrenFromPiece NumNodes = 3 inputs.size() = 0 [ OK ] WorkGraphTests.ParentsAndChildrenFromPiece (1 ms) [ RUN ] WorkGraphTests.ParentsAndChildren [ OK ] WorkGraphTests.ParentsAndChildren (0 ms) [ RUN ] WorkGraphTests.FixedInOutNum sh: 1: dot: not found rm: cannot remove 'modules/Modeling/test/WorkGraphVisualizations/FixedInOutNum_temp.dot': No such file or directory [ OK ] WorkGraphTests.FixedInOutNum (3 ms) [ RUN ] WorkGraphTests.FixedInOutType Nodes: test 0 test 1 sh: 1: dot: not found rm: cannot remove 'modules/Modeling/test/WorkGraphVisualizations/FixedInOutType_temp.dot': No such file or directory Edges: test 0[1] -> test 1[1] test 0[0] -> test 1[0] [ OK ] WorkGraphTests.FixedInOutType (4 ms) [ RUN ] WorkGraphTests.DependentCut sh: 1: dot: not found rm: cannot remove 'modules/Modeling/test/WorkGraphVisualizations/DependentCut_temp.dot': No such file or directory [ OK ] WorkGraphTests.DependentCut (4 ms) [ RUN ] WorkGraphTests.IsConstant [ OK ] WorkGraphTests.IsConstant (0 ms) [ RUN ] WorkGraphTests.ConstantDependentCut sh: 1: dot: not found rm: cannot remove 'modules/Modeling/test/WorkGraphVisualizations/ConstantDependentCut_BeforeCut_temp.dot': No such file or directory sh: 1: dot: not found rm: cannot remove 'modules/Modeling/test/WorkGraphVisualizations/ConstantDependentCut_AfterCut_temp.dot': No such file or directory [ OK ] WorkGraphTests.ConstantDependentCut (8 ms) [----------] 10 tests from WorkGraphTests (24 ms total) [----------] 1 test from WorkGraphPiece [ RUN ] WorkGraphPiece.FixedInOutNum sh: 1: dot: not found rm: cannot remove 'modules/Modeling/test/WorkGraphVisualizations/FixedInOutNum_WorkPiece_temp.dot': No such file or directory [ OK ] WorkGraphPiece.FixedInOutNum (4 ms) [----------] 1 test from WorkGraphPiece (4 ms total) [----------] 7 tests from Modeling_ModGraphPiece [ RUN ] Modeling_ModGraphPiece.MatchInputs [ OK ] Modeling_ModGraphPiece.MatchInputs (0 ms) [ RUN ] Modeling_ModGraphPiece.BasicTest [ OK ] Modeling_ModGraphPiece.BasicTest (1 ms) [ RUN ] Modeling_ModGraphPiece.Caching [ OK ] Modeling_ModGraphPiece.Caching (1 ms) [ RUN ] Modeling_ModGraphPiece.MultiSplit sh: 1: dot: not found [ OK ] Modeling_ModGraphPiece.MultiSplit (5 ms) [ RUN ] Modeling_ModGraphPiece.DiamondTest [ OK ] Modeling_ModGraphPiece.DiamondTest (2 ms) [ RUN ] Modeling_ModGraphPiece.LinearGaussPosterior sh: 1: dot: not found sh: 1: dot: not found [ OK ] Modeling_ModGraphPiece.LinearGaussPosterior (10 ms) [ RUN ] Modeling_ModGraphPiece.DiamondTestOperator [ OK ] Modeling_ModGraphPiece.DiamondTestOperator (2 ms) [----------] 7 tests from Modeling_ModGraphPiece (21 ms total) [----------] 5 tests from ModPieceTest [ RUN ] ModPieceTest.NamingTest [ OK ] ModPieceTest.NamingTest (0 ms) [ RUN ] ModPieceTest.UniqueNames [ OK ] ModPieceTest.UniqueNames (0 ms) [ RUN ] ModPieceTest.FiniteDifference [ OK ] ModPieceTest.FiniteDifference (0 ms) [ RUN ] ModPieceTest.SingleGrad [ OK ] ModPieceTest.SingleGrad (0 ms) [ RUN ] ModPieceTest.SingleJacobian [ OK ] ModPieceTest.SingleJacobian (0 ms) [----------] 5 tests from ModPieceTest (0 ms total) [----------] 1 test from ModellingModelTest [ RUN ] ModellingModelTest.SingleEval [ OK ] ModellingModelTest.SingleEval (0 ms) [----------] 1 test from ModellingModelTest (0 ms total) [----------] 3 tests from ConstantPiece [ RUN ] ConstantPiece.BasicTest [ OK ] ConstantPiece.BasicTest (0 ms) [ RUN ] ConstantPiece.RecursiveConstructor [ OK ] ConstantPiece.RecursiveConstructor (0 ms) [ RUN ] ConstantPiece.DefaultConstructor [ OK ] ConstantPiece.DefaultConstructor (0 ms) [----------] 3 tests from ConstantPiece (1 ms total) [----------] 2 tests from DerivativePiecesTest [ RUN ] DerivativePiecesTest.GradientPiece [ OK ] DerivativePiecesTest.GradientPiece (0 ms) [ RUN ] DerivativePiecesTest.JacobianPiece [ OK ] DerivativePiecesTest.JacobianPiece (0 ms) [----------] 2 tests from DerivativePiecesTest (0 ms total) [----------] 5 tests from IdentityPiece [ RUN ] IdentityPiece.Unfixed [ OK ] IdentityPiece.Unfixed (0 ms) [ RUN ] IdentityPiece.FixedNum [ OK ] IdentityPiece.FixedNum (0 ms) [ RUN ] IdentityPiece.FixedType [ OK ] IdentityPiece.FixedType (0 ms) [ RUN ] IdentityPiece.SomeFixedTypes [ OK ] IdentityPiece.SomeFixedTypes (0 ms) [ RUN ] IdentityPiece.SomeFixedTypesFixedNum [ OK ] IdentityPiece.SomeFixedTypesFixedNum (0 ms) [----------] 5 tests from IdentityPiece (0 ms total) [----------] 2 tests from SplitVectorTests [ RUN ] SplitVectorTests.Basic [ OK ] SplitVectorTests.Basic (0 ms) [ RUN ] SplitVectorTests.Extract [ OK ] SplitVectorTests.Extract (0 ms) [----------] 2 tests from SplitVectorTests (0 ms total) [----------] 1 test from ScaleVectorTests [ RUN ] ScaleVectorTests.Basic [ OK ] ScaleVectorTests.Basic (0 ms) [----------] 1 test from ScaleVectorTests (0 ms total) [----------] 1 test from CombineVectorsTests [ RUN ] CombineVectorsTests.Basic [ OK ] CombineVectorsTests.Basic (0 ms) [----------] 1 test from CombineVectorsTests (0 ms total) [----------] 1 test from Modeling [ RUN ] Modeling.SumPiece [ OK ] Modeling.SumPiece (0 ms) [----------] 1 test from Modeling (0 ms total) [----------] 2 tests from MultiLogisticLikelihood [ RUN ] MultiLogisticLikelihood.Evaluate [ OK ] MultiLogisticLikelihood.Evaluate (0 ms) [ RUN ] MultiLogisticLikelihood.Derivatives [ OK ] MultiLogisticLikelihood.Derivatives (0 ms) [----------] 2 tests from MultiLogisticLikelihood (0 ms total) [----------] 8 tests from CwiseOperators [ RUN ] CwiseOperators.SimpleBase [ OK ] CwiseOperators.SimpleBase (0 ms) [ RUN ] CwiseOperators.ExpOperator [ OK ] CwiseOperators.ExpOperator (0 ms) [ RUN ] CwiseOperators.SinOperator [ OK ] CwiseOperators.SinOperator (0 ms) [ RUN ] CwiseOperators.CosOperator [ OK ] CwiseOperators.CosOperator (0 ms) [ RUN ] CwiseOperators.AbsOperator [ OK ] CwiseOperators.AbsOperator (0 ms) [ RUN ] CwiseOperators.AcosOperator [ OK ] CwiseOperators.AcosOperator (0 ms) [ RUN ] CwiseOperators.CbrtOperator [ OK ] CwiseOperators.CbrtOperator (0 ms) [ RUN ] CwiseOperators.DigammaOperator [ OK ] CwiseOperators.DigammaOperator (0 ms) [----------] 8 tests from CwiseOperators (0 ms total) [----------] 1 test from FlannCache [ RUN ] FlannCache.CreateCache [ OK ] FlannCache.CreateCache (0 ms) [----------] 1 test from FlannCache (0 ms total) [----------] 5 tests from Utilties_LinearOperator [ RUN ] Utilties_LinearOperator.EigenDense [ OK ] Utilties_LinearOperator.EigenDense (0 ms) [ RUN ] Utilties_LinearOperator.EigenSparse [ OK ] Utilties_LinearOperator.EigenSparse (0 ms) [ RUN ] Utilties_LinearOperator.SliceOperator [ OK ] Utilties_LinearOperator.SliceOperator (0 ms) [ RUN ] Utilties_LinearOperator.SliceOperatorReverse [ OK ] Utilties_LinearOperator.SliceOperatorReverse (1 ms) [ RUN ] Utilties_LinearOperator.SliceOperatorNegativeIndex [ OK ] Utilties_LinearOperator.SliceOperatorNegativeIndex (0 ms) [----------] 5 tests from Utilties_LinearOperator (1 ms total) [----------] 10 tests from Utilities_LinearOperator [ RUN ] Utilities_LinearOperator.Conversion [ OK ] Utilities_LinearOperator.Conversion (0 ms) [ RUN ] Utilities_LinearOperator.CompanionMatrix [ OK ] Utilities_LinearOperator.CompanionMatrix (0 ms) [ RUN ] Utilities_LinearOperator.BlockDiagonal [ OK ] Utilities_LinearOperator.BlockDiagonal (0 ms) [ RUN ] Utilities_LinearOperator.KroneckerProduct [ OK ] Utilities_LinearOperator.KroneckerProduct (0 ms) [ RUN ] Utilities_LinearOperator.DenseKronecker [ OK ] Utilities_LinearOperator.DenseKronecker (0 ms) [ RUN ] Utilities_LinearOperator.Sum [ OK ] Utilities_LinearOperator.Sum (0 ms) [ RUN ] Utilities_LinearOperator.BlockRow [ OK ] Utilities_LinearOperator.BlockRow (0 ms) [ RUN ] Utilities_LinearOperator.Concatenate_BadSizes [ OK ] Utilities_LinearOperator.Concatenate_BadSizes (0 ms) [ RUN ] Utilities_LinearOperator.Concatenate [ OK ] Utilities_LinearOperator.Concatenate (0 ms) [ RUN ] Utilities_LinearOperator.Concatenate_StackFuncs [ OK ] Utilities_LinearOperator.Concatenate_StackFuncs (0 ms) [----------] 10 tests from Utilities_LinearOperator (0 ms total) [----------] 3 tests from Utilities_LyapunovSolver [ RUN ] Utilities_LyapunovSolver.Diagonal [ OK ] Utilities_LyapunovSolver.Diagonal (0 ms) [ RUN ] Utilities_LyapunovSolver.DampedOscillator [ OK ] Utilities_LyapunovSolver.DampedOscillator (0 ms) [ RUN ] Utilities_LyapunovSolver.MaternTest [ OK ] Utilities_LyapunovSolver.MaternTest (0 ms) [----------] 3 tests from Utilities_LyapunovSolver (0 ms total) [----------] 1 test from Utilties_AffineOperator [ RUN ] Utilties_AffineOperator.EigenDense [ OK ] Utilties_AffineOperator.EigenDense (0 ms) [----------] 1 test from Utilties_AffineOperator (0 ms total) [----------] 9 tests from LOBPCG [ RUN ] LOBPCG.Diagonal_BigBlock [ OK ] LOBPCG.Diagonal_BigBlock (0 ms) [ RUN ] LOBPCG.Diagonal_MedBlock [ OK ] LOBPCG.Diagonal_MedBlock (0 ms) [ RUN ] LOBPCG.Diagonal_SmallBlock [ OK ] LOBPCG.Diagonal_SmallBlock (1 ms) [ RUN ] LOBPCG.Diagonal_Tolerance [ OK ] LOBPCG.Diagonal_Tolerance (0 ms) [ RUN ] LOBPCG.Random [ OK ] LOBPCG.Random (0 ms) [ RUN ] LOBPCG.RandomIdentity [ OK ] LOBPCG.RandomIdentity (1 ms) [ RUN ] LOBPCG.RandomGeneral [ OK ] LOBPCG.RandomGeneral (0 ms) [ RUN ] LOBPCG.RandomGeneralPrecond [ OK ] LOBPCG.RandomGeneralPrecond (3 ms) [ RUN ] LOBPCG.RandomGeneralPrecondConstrained [ OK ] LOBPCG.RandomGeneralPrecondConstrained (3 ms) [----------] 9 tests from LOBPCG (8 ms total) [----------] 4 tests from StochasticEigenSolver [ RUN ] StochasticEigenSolver.Diagonal_AllAtOnce [ OK ] StochasticEigenSolver.Diagonal_AllAtOnce (0 ms) [ RUN ] StochasticEigenSolver.Diagonal_Incremental [ OK ] StochasticEigenSolver.Diagonal_Incremental (0 ms) [ RUN ] StochasticEigenSolver.Random [ OK ] StochasticEigenSolver.Random (0 ms) [ RUN ] StochasticEigenSolver.RandomGeneral [ OK ] StochasticEigenSolver.RandomGeneral (0 ms) [----------] 4 tests from StochasticEigenSolver (0 ms total) [----------] 1 test from ODEExample [ RUN ] ODEExample.RHS [ OK ] ODEExample.RHS (0 ms) [----------] 1 test from ODEExample (0 ms total) [----------] 7 tests from ODETests [ RUN ] ODETests.BDFNewtonMethod [ OK ] ODETests.BDFNewtonMethod (5 ms) [ RUN ] ODETests.BDFIterMethod [ OK ] ODETests.BDFIterMethod (4 ms) [ RUN ] ODETests.AdamsNewtonMethod [ OK ] ODETests.AdamsNewtonMethod (3 ms) [ RUN ] ODETests.AdamsIterMethod [ OK ] ODETests.AdamsIterMethod (3 ms) [ RUN ] ODETests.SPGMR [ OK ] ODETests.SPGMR (6 ms) [ RUN ] ODETests.SPBCG [ OK ] ODETests.SPBCG (3 ms) [ RUN ] ODETests.SPTFQMR [ OK ] ODETests.SPTFQMR (3 ms) [----------] 7 tests from ODETests (27 ms total) [----------] 2 tests from Distribution [ RUN ] Distribution.EvaluateDensity [ OK ] Distribution.EvaluateDensity (0 ms) [ RUN ] Distribution.EvaluateSample [ OK ] Distribution.EvaluateSample (0 ms) [----------] 2 tests from Distribution (0 ms total) [----------] 4 tests from InverseGammaDistributionTests [ RUN ] InverseGammaDistributionTests.EvaluateLogDensity [ OK ] InverseGammaDistributionTests.EvaluateLogDensity (0 ms) [ RUN ] InverseGammaDistributionTests.EvaluateLogDensity_Multivariate [ OK ] InverseGammaDistributionTests.EvaluateLogDensity_Multivariate (0 ms) [ RUN ] InverseGammaDistributionTests.Sample [ OK ] InverseGammaDistributionTests.Sample (179 ms) [ RUN ] InverseGammaDistributionTests.Sample_Multivariate [ OK ] InverseGammaDistributionTests.Sample_Multivariate (322 ms) [----------] 4 tests from InverseGammaDistributionTests (501 ms total) [----------] 3 tests from UniformDistributionTests [ RUN ] UniformDistributionTests.EvaluateLogDensity [ OK ] UniformDistributionTests.EvaluateLogDensity (0 ms) [ RUN ] UniformDistributionTests.Sample1D [ OK ] UniformDistributionTests.Sample1D (0 ms) [ RUN ] UniformDistributionTests.Sample [ OK ] UniformDistributionTests.Sample (0 ms) [----------] 3 tests from UniformDistributionTests (0 ms total) [----------] 8 tests from GaussianDistributionTests [ RUN ] GaussianDistributionTests.SpecifyMean [ OK ] GaussianDistributionTests.SpecifyMean (86 ms) [ RUN ] GaussianDistributionTests.ChangeHyperparameters [ OK ] GaussianDistributionTests.ChangeHyperparameters (91 ms) [ RUN ] GaussianDistributionTests.SpecifyBoth [ OK ] GaussianDistributionTests.SpecifyBoth (1014 ms) [ RUN ] GaussianDistributionTests.ModPieceInputs [ OK ] GaussianDistributionTests.ModPieceInputs (0 ms) [ RUN ] GaussianDistributionTests.Gradient [ OK ] GaussianDistributionTests.Gradient (0 ms) [ RUN ] GaussianDistributionTests.Hessian [ OK ] GaussianDistributionTests.Hessian (0 ms) [ RUN ] GaussianDistributionTests.DiagonalCovPrec [ OK ] GaussianDistributionTests.DiagonalCovPrec (92 ms) [ RUN ] GaussianDistributionTests.MatrixCovPrec [ OK ] GaussianDistributionTests.MatrixCovPrec (1032 ms) [----------] 8 tests from GaussianDistributionTests (2315 ms total) [----------] 2 tests from Distribution_DensityProduct [ RUN ] Distribution_DensityProduct.EvaluateDensity [ OK ] Distribution_DensityProduct.EvaluateDensity (0 ms) [ RUN ] Distribution_DensityProduct.EvaluateOnGraph [ OK ] Distribution_DensityProduct.EvaluateOnGraph (0 ms) [----------] 2 tests from Distribution_DensityProduct (0 ms total) [----------] 11 tests from OptimizationTests [ RUN ] OptimizationTests.COBYLA [ OK ] OptimizationTests.COBYLA (1 ms) [ RUN ] OptimizationTests.BOBYQA [ OK ] OptimizationTests.BOBYQA (1 ms) [ RUN ] OptimizationTests.NEWUOA [ OK ] OptimizationTests.NEWUOA (11 ms) [ RUN ] OptimizationTests.PRAXIS [ OK ] OptimizationTests.PRAXIS (0 ms) [ RUN ] OptimizationTests.NM [ OK ] OptimizationTests.NM (0 ms) [ RUN ] OptimizationTests.SBPLX [ OK ] OptimizationTests.SBPLX (0 ms) [ RUN ] OptimizationTests.MMA [ OK ] OptimizationTests.MMA (0 ms) [ RUN ] OptimizationTests.SLSQP [ OK ] OptimizationTests.SLSQP (1 ms) [ RUN ] OptimizationTests.LBFGS [ OK ] OptimizationTests.LBFGS (0 ms) [ RUN ] OptimizationTests.PreTN [ OK ] OptimizationTests.PreTN (0 ms) [ RUN ] OptimizationTests.LMVM [ OK ] OptimizationTests.LMVM (0 ms) [----------] 11 tests from OptimizationTests (15 ms total) [----------] 2 tests from ConstrainedOptimizationTests [ RUN ] ConstrainedOptimizationTests.COBYLA [ OK ] ConstrainedOptimizationTests.COBYLA (0 ms) [ RUN ] ConstrainedOptimizationTests.SLSQP [ OK ] ConstrainedOptimizationTests.SLSQP (0 ms) [----------] 2 tests from ConstrainedOptimizationTests (0 ms total) [----------] 1 test from CostFunctionTests [ RUN ] CostFunctionTests.RosenbrockCost [ OK ] CostFunctionTests.RosenbrockCost (0 ms) [----------] 1 test from CostFunctionTests (0 ms total) [----------] 1 test from ModPieceCostFunctionTests [ RUN ] ModPieceCostFunctionTests.RosenbrockCost [ OK ] ModPieceCostFunctionTests.RosenbrockCost (0 ms) [----------] 1 test from ModPieceCostFunctionTests (0 ms total) [----------] 23 tests from Approximation_GP [ RUN ] Approximation_GP.LinearTransformKernel [ OK ] Approximation_GP.LinearTransformKernel (0 ms) [ RUN ] Approximation_GP.Clone [ OK ] Approximation_GP.Clone (0 ms) [ RUN ] Approximation_GP.KernelConcatenation [ OK ] Approximation_GP.KernelConcatenation (0 ms) [ RUN ] Approximation_GP.SquaredExpKernel [ OK ] Approximation_GP.SquaredExpKernel (0 ms) [ RUN ] Approximation_GP.MaternKernel [ OK ] Approximation_GP.MaternKernel (1 ms) [ RUN ] Approximation_GP.Discretize [ OK ] Approximation_GP.Discretize (2 ms) [ RUN ] Approximation_GP.DiscretizeConcatenate [ OK ] Approximation_GP.DiscretizeConcatenate (6 ms) [ RUN ] Approximation_GP.HyperFit1d [ OK ] Approximation_GP.HyperFit1d (0 ms) [ RUN ] Approximation_GP.HyperFit2d [ OK ] Approximation_GP.HyperFit2d (5 ms) [ RUN ] Approximation_GP.ValueCondition [ OK ] Approximation_GP.ValueCondition (0 ms) [ RUN ] Approximation_GP.GradientCondition [ OK ] Approximation_GP.GradientCondition (0 ms) [ RUN ] Approximation_GP.HessianCondition [ OK ] Approximation_GP.HessianCondition (0 ms) [ RUN ] Approximation_GP.MaternStateSpace [ OK ] Approximation_GP.MaternStateSpace (6 ms) [ RUN ] Approximation_GP.StateSpace_DistributionIntegration [ OK ] Approximation_GP.StateSpace_DistributionIntegration (709 ms) [ RUN ] Approximation_GP.StateSpace_DistributionIntegration2 [ OK ] Approximation_GP.StateSpace_DistributionIntegration2 (493 ms) [ RUN ] Approximation_GP.PeriodicStateSpace [ OK ] Approximation_GP.PeriodicStateSpace (103 ms) [ RUN ] Approximation_GP.SumStateSpace [ OK ] Approximation_GP.SumStateSpace (78 ms) [ RUN ] Approximation_GP.ProductStateSpace [ OK ] Approximation_GP.ProductStateSpace (178 ms) [ RUN ] Approximation_GP.StateSpacePredict_Interpolation [ OK ] Approximation_GP.StateSpacePredict_Interpolation (25 ms) [ RUN ] Approximation_GP.StateSpacePredict_ExtrapolateRight [ OK ] Approximation_GP.StateSpacePredict_ExtrapolateRight (166 ms) [ RUN ] Approximation_GP.StateSpacePredict_ExtrapolateLeft [ OK ] Approximation_GP.StateSpacePredict_ExtrapolateLeft (239 ms) [ RUN ] Approximation_GP.KarhunenLoeve_BasicConstruction [ OK ] Approximation_GP.KarhunenLoeve_BasicConstruction (764 ms) [ RUN ] Approximation_GP.KarhunenLoeve_GaussQuad [ OK ] Approximation_GP.KarhunenLoeve_GaussQuad (7 ms) [----------] 23 tests from Approximation_GP (2782 ms total) [----------] 5 tests from Approximation_BasisExpansion [ RUN ] Approximation_BasisExpansion.Constructor1 [ OK ] Approximation_BasisExpansion.Constructor1 (0 ms) [ RUN ] Approximation_BasisExpansion.Constructor2 [ OK ] Approximation_BasisExpansion.Constructor2 (0 ms) [ RUN ] Approximation_BasisExpansion.Constructor3 [ OK ] Approximation_BasisExpansion.Constructor3 (0 ms) [ RUN ] Approximation_BasisExpansion.Linear [ OK ] Approximation_BasisExpansion.Linear (0 ms) [ RUN ] Approximation_BasisExpansion.Quadratic [ OK ] Approximation_BasisExpansion.Quadratic (0 ms) [----------] 5 tests from Approximation_BasisExpansion (0 ms total) [----------] 5 tests from Approximation_MonotoneExpansion1d [ RUN ] Approximation_MonotoneExpansion1d.Evaluate [ OK ] Approximation_MonotoneExpansion1d.Evaluate (1 ms) [ RUN ] Approximation_MonotoneExpansion1d.JacobianFD [ OK ] Approximation_MonotoneExpansion1d.JacobianFD (0 ms) [ RUN ] Approximation_MonotoneExpansion1d.CoeffJacobian [ OK ] Approximation_MonotoneExpansion1d.CoeffJacobian (0 ms) [ RUN ] Approximation_MonotoneExpansion1d.Determinant [ OK ] Approximation_MonotoneExpansion1d.Determinant (0 ms) [ RUN ] Approximation_MonotoneExpansion1d.EvaluateWithCoeffs [ OK ] Approximation_MonotoneExpansion1d.EvaluateWithCoeffs (0 ms) [----------] 5 tests from Approximation_MonotoneExpansion1d (1 ms total) [----------] 5 tests from Approximation_MonotoneExpansion2d [ RUN ] Approximation_MonotoneExpansion2d.Evaluate [ OK ] Approximation_MonotoneExpansion2d.Evaluate (0 ms) [ RUN ] Approximation_MonotoneExpansion2d.Inverse [ OK ] Approximation_MonotoneExpansion2d.Inverse (1 ms) [ RUN ] Approximation_MonotoneExpansion2d.Jacobian [ OK ] Approximation_MonotoneExpansion2d.Jacobian (0 ms) [ RUN ] Approximation_MonotoneExpansion2d.CoeffsJacobian [ OK ] Approximation_MonotoneExpansion2d.CoeffsJacobian (1 ms) [ RUN ] Approximation_MonotoneExpansion2d.Determinant [ OK ] Approximation_MonotoneExpansion2d.Determinant (0 ms) [----------] 5 tests from Approximation_MonotoneExpansion2d (2 ms total) [----------] 7 tests from Polynomial [ RUN ] Polynomial.Monomial [ OK ] Polynomial.Monomial (0 ms) [ RUN ] Polynomial.PhysicistHermite [ OK ] Polynomial.PhysicistHermite (0 ms) [ RUN ] Polynomial.ProbabilistHermite [ OK ] Polynomial.ProbabilistHermite (0 ms) [ RUN ] Polynomial.Legendre [ OK ] Polynomial.Legendre (0 ms) [ RUN ] Polynomial.Laguerre [ OK ] Polynomial.Laguerre (0 ms) [ RUN ] Polynomial.Jacobi [ OK ] Polynomial.Jacobi (0 ms) [ RUN ] Polynomial.Factory [ OK ] Polynomial.Factory (0 ms) [----------] 7 tests from Polynomial (0 ms total) [----------] 9 tests from PolynomialChaos [ RUN ] PolynomialChaos.PCEFactory_Legendre1D_Gauss [ OK ] PolynomialChaos.PCEFactory_Legendre1D_Gauss (1 ms) [ RUN ] PolynomialChaos.PCEFactory_Legendre2D_Gauss [ OK ] PolynomialChaos.PCEFactory_Legendre2D_Gauss (2 ms) [ RUN ] PolynomialChaos.PCE_Moments [ OK ] PolynomialChaos.PCE_Moments (0 ms) [ RUN ] PolynomialChaos.PCE_Sensitivities [ OK ] PolynomialChaos.PCE_Sensitivities (0 ms) [ RUN ] PolynomialChaos.PCE_WeightedSum [ OK ] PolynomialChaos.PCE_WeightedSum (0 ms) [ RUN ] PolynomialChaos.AdaptiveSmolyak_Cos2d [ OK ] PolynomialChaos.AdaptiveSmolyak_Cos2d (30 ms) [ RUN ] PolynomialChaos.AdaptiveSmolyak_AdaptForError [ OK ] PolynomialChaos.AdaptiveSmolyak_AdaptForError (16 ms) [ RUN ] PolynomialChaos.AdaptiveSmolyak_AdaptForTime [ OK ] PolynomialChaos.AdaptiveSmolyak_AdaptForTime (53 ms) [ RUN ] PolynomialChaos.AdaptiveSmolyak_AdaptForEvals [ OK ] PolynomialChaos.AdaptiveSmolyak_AdaptForEvals (12 ms) [----------] 9 tests from PolynomialChaos (114 ms total) [----------] 17 tests from Quadrature [ RUN ] Quadrature.AdaptiveSmolyak_StaticGaussQuad [ OK ] Quadrature.AdaptiveSmolyak_StaticGaussQuad (7 ms) [ RUN ] Quadrature.AdaptiveSmolyak_AdaptiveGaussQuad [ OK ] Quadrature.AdaptiveSmolyak_AdaptiveGaussQuad (6 ms) [ RUN ] Quadrature.AdaptiveSmolyak_AdaptiveClenshawCurtis [ OK ] Quadrature.AdaptiveSmolyak_AdaptiveClenshawCurtis (4 ms) [ RUN ] Quadrature.AdaptiveSmolyak_AdaptiveGaussPatterson [ OK ] Quadrature.AdaptiveSmolyak_AdaptiveGaussPatterson (3 ms) [ RUN ] Quadrature.AdaptiveSmolyak_AdaptiveExponential [ OK ] Quadrature.AdaptiveSmolyak_AdaptiveExponential (4 ms) [ RUN ] Quadrature.PhysicistHermite [ OK ] Quadrature.PhysicistHermite (0 ms) [ RUN ] Quadrature.ProbabilistHermite [ OK ] Quadrature.ProbabilistHermite (0 ms) [ RUN ] Quadrature.LegendreFromString [ OK ] Quadrature.LegendreFromString (0 ms) [ RUN ] Quadrature.Legendre [ OK ] Quadrature.Legendre (0 ms) [ RUN ] Quadrature.LaguerreDefault [ OK ] Quadrature.LaguerreDefault (0 ms) [ RUN ] Quadrature.Laguerre [ OK ] Quadrature.Laguerre (0 ms) [ RUN ] Quadrature.JacobiDefault [ OK ] Quadrature.JacobiDefault (0 ms) [ RUN ] Quadrature.Jacobi Points: -0.7198842953848507 -0.3852703828805474 -1.31635225381052e-16 0.3852703828805472 0.7198842953848505 Weights: 0.03294330378740584 0.2271817563376543 0.3940355940355936 0.2271817563376542 0.03294330378740585 [ OK ] Quadrature.Jacobi (0 ms) [ RUN ] Quadrature.FullTensorSquareTest [ OK ] Quadrature.FullTensorSquareTest (1 ms) [ RUN ] Quadrature.SmolyakWeights [ OK ] Quadrature.SmolyakWeights (0 ms) [ RUN ] Quadrature.SmolyakSquareTest [ OK ] Quadrature.SmolyakSquareTest (33 ms) [ RUN ] Quadrature.ClenshawCurtis [ OK ] Quadrature.ClenshawCurtis (0 ms) [----------] 17 tests from Quadrature (58 ms total) [----------] 6 tests from RegressionTest [ RUN ] RegressionTest.LegendreBasis [ OK ] RegressionTest.LegendreBasis (2 ms) [ RUN ] RegressionTest.MonomialBasis [ OK ] RegressionTest.MonomialBasis (2 ms) [ RUN ] RegressionTest.PhysicistHermiteBasis [ OK ] RegressionTest.PhysicistHermiteBasis (2 ms) [ RUN ] RegressionTest.ProbabilistHermiteBasis [ OK ] RegressionTest.ProbabilistHermiteBasis (4 ms) [ RUN ] RegressionTest.LaguerreBasis [ OK ] RegressionTest.LaguerreBasis (4 ms) [ RUN ] RegressionTest.JacobiBasis [ OK ] RegressionTest.JacobiBasis (2 ms) [----------] 6 tests from RegressionTest (16 ms total) [----------] 2 tests from LocalRegressionTest [ RUN ] LocalRegressionTest.Basic [ OK ] LocalRegressionTest.Basic (0 ms) [ RUN ] LocalRegressionTest.Poisedness [ OK ] LocalRegressionTest.Poisedness (31 ms) [----------] 2 tests from LocalRegressionTest (31 ms total) [----------] 1 test from SampleCollectionMetaTest [ RUN ] SampleCollectionMetaTest.List bonus id [ OK ] SampleCollectionMetaTest.List (0 ms) [----------] 1 test from SampleCollectionMetaTest (0 ms total) [----------] 9 tests from SampleCollectionTest [ RUN ] SampleCollectionTest.Mean [ OK ] SampleCollectionTest.Mean (58 ms) [ RUN ] SampleCollectionTest.SampMean [ OK ] SampleCollectionTest.SampMean (52 ms) [ RUN ] SampleCollectionTest.ExpectedValue [ OK ] SampleCollectionTest.ExpectedValue (48 ms) [ RUN ] SampleCollectionTest.ToMatrix [ OK ] SampleCollectionTest.ToMatrix (33 ms) [ RUN ] SampleCollectionTest.ToWeights [ OK ] SampleCollectionTest.ToWeights (31 ms) [ RUN ] SampleCollectionTest.ESS [ OK ] SampleCollectionTest.ESS (31 ms) [ RUN ] SampleCollectionTest.Variance [ OK ] SampleCollectionTest.Variance (35 ms) [ RUN ] SampleCollectionTest.Covariance [ OK ] SampleCollectionTest.Covariance (39 ms) [ RUN ] SampleCollectionTest.WriteToFile [ OK ] SampleCollectionTest.WriteToFile (111 ms) [----------] 9 tests from SampleCollectionTest (440 ms total) [----------] 7 tests from MarkovChainTest [ RUN ] MarkovChainTest.Mean [ OK ] MarkovChainTest.Mean (76 ms) [ RUN ] MarkovChainTest.SampMean [ OK ] MarkovChainTest.SampMean (63 ms) [ RUN ] MarkovChainTest.ToMatrix [ OK ] MarkovChainTest.ToMatrix (75 ms) [ RUN ] MarkovChainTest.ToWeights [ OK ] MarkovChainTest.ToWeights (68 ms) [ RUN ] MarkovChainTest.ESS [ OK ] MarkovChainTest.ESS (147 ms) [ RUN ] MarkovChainTest.Variance [ OK ] MarkovChainTest.Variance (97 ms) [ RUN ] MarkovChainTest.Covariance [ OK ] MarkovChainTest.Covariance (97 ms) [----------] 7 tests from MarkovChainTest (623 ms total) [----------] 2 tests from MIMCMCTest [ RUN ] MIMCMCTest.MIMCMC [ OK ] MIMCMCTest.MIMCMC (2936 ms) [ RUN ] MIMCMCTest.SLMCMC Starting single chain MCMC sampler... 10% Complete Block 0: Acceptance Rate = 28% 20% Complete Block 0: Acceptance Rate = 27% 30% Complete Block 0: Acceptance Rate = 28% 40% Complete Block 0: Acceptance Rate = 28% 50% Complete Block 0: Acceptance Rate = 28% 60% Complete Block 0: Acceptance Rate = 28% 70% Complete Block 0: Acceptance Rate = 29% 80% Complete Block 0: Acceptance Rate = 28% 90% Complete Block 0: Acceptance Rate = 28% 100% Complete Block 0: Acceptance Rate = 28% Completed in 0.07305258499999988 seconds. [ OK ] MIMCMCTest.SLMCMC (93 ms) [----------] 2 tests from MIMCMCTest (3030 ms total) [----------] 1 test from MLMCMCTest [ RUN ] MLMCMCTest.GreedyMLMCMC [ OK ] MLMCMCTest.GreedyMLMCMC (3401 ms) [----------] 1 test from MLMCMCTest (3403 ms total) [----------] 1 test from GMHKernelTest [ RUN ] GMHKernelTest.ProposalTest [ OK ] GMHKernelTest.ProposalTest (8 ms) [----------] 1 test from GMHKernelTest (8 ms total) [----------] 1 test from ImportanceSamplingTests [ RUN ] ImportanceSamplingTests.Setup [ OK ] ImportanceSamplingTests.Setup (1115 ms) [----------] 1 test from ImportanceSamplingTests (1116 ms total) [----------] 22 tests from MCMC [ RUN ] MCMC.MHKernel_ThinScheduler [ OK ] MCMC.MHKernel_ThinScheduler (64 ms) [ RUN ] MCMC.MHKernel_MHProposal [ OK ] MCMC.MHKernel_MHProposal (102 ms) [ RUN ] MCMC.MHKernel_RepeatedRuns [ OK ] MCMC.MHKernel_RepeatedRuns (90 ms) [ RUN ] MCMC.MHKernel_MixtureProposal [ OK ] MCMC.MHKernel_MixtureProposal (98 ms) [ RUN ] MCMC.MHKernel_MALAProposal [ OK ] MCMC.MHKernel_MALAProposal (186 ms) [ RUN ] MCMC.MetropolisInGibbs_IsoGauss [ OK ] MCMC.MetropolisInGibbs_IsoGauss (1408 ms) [ RUN ] MCMC.MHKernel_AMProposal [ OK ] MCMC.MHKernel_AMProposal (480 ms) [ RUN ] MCMC.MHKernel_DRAM [ OK ] MCMC.MHKernel_DRAM (1118 ms) [ RUN ] MCMC.DRKernel_MHProposal [ OK ] MCMC.DRKernel_MHProposal (211 ms) [ RUN ] MCMC.DRKernel_MALA_Scaled [ OK ] MCMC.DRKernel_MALA_Scaled (295 ms) [ RUN ] MCMC.DRKernel_MALA_Direct [ OK ] MCMC.DRKernel_MALA_Direct (280 ms) [ RUN ] MCMC.DRKernel_Mixed [ OK ] MCMC.DRKernel_Mixed (268 ms) [ RUN ] MCMC.DRKernel_MHProposal_Scaling [ OK ] MCMC.DRKernel_MHProposal_Scaling (79 ms) [ RUN ] MCMC.DILIKernel_HessianOperator [ OK ] MCMC.DILIKernel_HessianOperator (8 ms) [ RUN ] MCMC.DILIKernel_ManualConstruction [ OK ] MCMC.DILIKernel_ManualConstruction (1455 ms) [ RUN ] MCMC.DILIKernel_AutomaticConstruction [ OK ] MCMC.DILIKernel_AutomaticConstruction (1387 ms) [ RUN ] MCMC.DILIKernel_AutomaticGaussNewton [ OK ] MCMC.DILIKernel_AutomaticGaussNewton (1417 ms) [ RUN ] MCMC.DILIKernel_LogNormal [ OK ] MCMC.DILIKernel_LogNormal (2646 ms) [ RUN ] MCMC.CrankNicolson [ OK ] MCMC.CrankNicolson (6304 ms) [ RUN ] MCMC.CrankNicolsonInGibbs [ OK ] MCMC.CrankNicolsonInGibbs (2558 ms) [ RUN ] MCMC.InfMALA [ OK ] MCMC.InfMALA (2325 ms) [ RUN ] MCMC.InfMALAInGibbs [ OK ] MCMC.InfMALAInGibbs (113 ms) [----------] 22 tests from MCMC (22897 ms total) [----------] 1 test from SamplingProblem [ RUN ] SamplingProblem.GaussianTarget [ OK ] SamplingProblem.GaussianTarget (0 ms) [----------] 1 test from SamplingProblem (0 ms total) [----------] 1 test from ExpensiveSamplingProblemTests [ RUN ] ExpensiveSamplingProblemTests.GaussianTarget [ OK ] ExpensiveSamplingProblemTests.GaussianTarget (302 ms) [----------] 1 test from ExpensiveSamplingProblemTests (302 ms total) [----------] 3 tests from Inference_KalmanFilter [ RUN ] Inference_KalmanFilter.SizeFail [ OK ] Inference_KalmanFilter.SizeFail (1 ms) [ RUN ] Inference_KalmanFilter.VectorNoise [ OK ] Inference_KalmanFilter.VectorNoise (0 ms) [ RUN ] Inference_KalmanFilter.FullNoise [ OK ] Inference_KalmanFilter.FullNoise (0 ms) [----------] 3 tests from Inference_KalmanFilter (1 ms total) [----------] Global test environment tear-down [==========] 330 tests from 61 test suites ran. (37808 ms total) [ PASSED ] 330 tests. + '[' 1 -eq 1 ']' + export PYTHONPATH=:/jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/lib + PYTHONPATH=:/jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds/install/lib + cd /jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds + exit 0 INFO: Starting to record. INFO: Processing GoogleTest-1.8 INFO: [GoogleTest-1.8] - 1 test report file(s) were found with the pattern 'build/TestResults.xml' relative to '/jenkins/workspace/MUQ2_Nightly/PyVersion/PYTHON3/label/reynolds' for the testing framework 'GoogleTest-1.8'. INFO: Check 'Failed Tests' threshold. INFO: Setting the build status to SUCCESS INFO: Stopping recording. [Checks API] No suitable checks publisher found. Finished: SUCCESS