Started by upstream project "ProjectX_Commit" build number 302 originally caused by: Started by remote host 18.33.1.199 Building remotely on macys in workspace /Users/jenkins/workspace/ProjectX_Commit/PX_ARC/release_clang/buildnode/macys > git rev-parse --is-inside-work-tree # timeout=10 Fetching changes from the remote Git repository > git config remote.acdl.url ssh://jenkins@acdl.mit.edu/home/svnroot/projectx.git/ # timeout=10 Pruning obsolete local branches Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 Fetching upstream changes from ssh://jenkins@acdl.mit.edu/home/svnroot/projectx.git/ > git --version # timeout=10 using GIT_SSH to set credentials > git -c core.askpass=true fetch --tags --progress ssh://jenkins@acdl.mit.edu/home/svnroot/projectx.git/ +refs/heads/*:refs/remotes/acdl/* --prune Merging Revision d2c1a9b2ad867b7a43e68fbbb3be16c26d7baf1f (acdl/galbramc/develop) to acdl/develop, UserMergeOptions{mergeRemote='acdl', mergeTarget='develop', mergeStrategy='default', fastForwardMode='--ff'} > git rev-parse acdl/develop^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f acdl/develop > git merge --ff d2c1a9b2ad867b7a43e68fbbb3be16c26d7baf1f # timeout=10 > git rev-parse HEAD^{commit} # timeout=10 Seen branch in repository acdl/allmaras/develop Seen branch in repository acdl/apprentice Seen branch in repository acdl/arthuang/develop Seen branch in repository acdl/carlee/develop Seen branch in repository acdl/develop Seen branch in repository acdl/galbramc/bamg_metric Seen branch in repository acdl/galbramc/develop Seen branch in repository acdl/master Seen branch in repository acdl/savithru/develop Seen branch in repository acdl/yixuan/devclean Seen branch in repository acdl/yixuan/develop Seen 11 remote branches Checking out Revision 51f69d7f222bffa3c97f1aa9521b39d3163fb99e (acdl/develop) > git config core.sparsecheckout # timeout=10 > git checkout -f 51f69d7f222bffa3c97f1aa9521b39d3163fb99e Using 'Changelog to branch' strategy. [macys] $ /bin/bash -xe /var/folders/wp/20zl4b2n0qxcrp90f31275f80000gp/T/hudson421728424220243743.sh + /bin/bash -ex /Users/jenkins/workspace/ProjectX_Commit/PX_ARC/release_clang/buildnode/macys/utils/jenkins/ProjectX_Commit.sh ++ hostname + [[ macys.mit.edu == \m\a\c\y\s\.\m\i\t\.\e\d\u ]] + [[ release_clang == *\i\n\t\e\l* ]] ++ uname -a + [[ Darwin macys.mit.edu 13.4.0 Darwin Kernel Version 13.4.0: Wed Mar 18 16:20:14 PDT 2015; root:xnu-2422.115.14~1/RELEASE_X86_64 x86_64 == \D\a\r\w\i\n* ]] + [[ release_clang == *\g\n\u* ]] + [[ release_clang == *\c\o\v\e\r\a\g\e* ]] + export PX_DIR=/Users/jenkins/workspace/ProjectX_Commit/PX_ARC/release_clang/buildnode/macys + PX_DIR=/Users/jenkins/workspace/ProjectX_Commit/PX_ARC/release_clang/buildnode/macys + BUILD=/Users/jenkins/workspace/ProjectX_Commit/PX_ARC/release_clang/buildnode/macys/platforms/release_clang + rm -rf /Users/jenkins/workspace/ProjectX_Commit/PX_ARC/release_clang/buildnode/macys/platforms/release_clang + source /Users/jenkins/workspace/ProjectX_Commit/PX_ARC/release_clang/buildnode/macys/utils/jenkins/jenkins_env.sh ++ shopt -s nocasematch +++ pwd ++ dir=/Users/jenkins/workspace/ProjectX_Commit/PX_ARC/release_clang/buildnode/macys +++ basename /Users/jenkins/workspace/ProjectX_Commit/PX_ARC/release_clang/buildnode/macys ++ builddir=macys +++ hostname ++ [[ macys.mit.edu == \r\e\y\n\o\l\d\s ]] +++ hostname ++ [[ macys.mit.edu == \m\a\c\y\s\.\m\i\t\.\e\d\u ]] ++ export PATH=/usr/local/bin:/usr/local/sbin:/usr/bin:/bin:/usr/sbin:/sbin ++ PATH=/usr/local/bin:/usr/local/sbin:/usr/bin:/bin:/usr/sbin:/sbin ++ export LAPACK_DIR=/usr/local/opt/lapack/ ++ LAPACK_DIR=/usr/local/opt/lapack/ ++ env + make cmake -- The C compiler identification is AppleClang 6.0.0.6000057 -- The CXX compiler identification is AppleClang 6.0.0.6000057 -- The Fortran compiler identification is GNU 5.3.0 -- Check for working C compiler: /usr/bin/clang -- Check for working C compiler: /usr/bin/clang -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/clang++ -- Check for working CXX compiler: /usr/bin/clang++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Checking whether Fortran compiler has -isysroot -- Checking whether Fortran compiler has -isysroot - yes -- Checking whether Fortran compiler supports OSX deployment target flag -- Checking whether Fortran compiler supports OSX deployment target flag - yes -- Check for working Fortran compiler: /usr/local/bin/gfortran -- Check for working Fortran compiler: /usr/local/bin/gfortran -- works -- Detecting Fortran compiler ABI info -- Detecting Fortran compiler ABI info - done -- Checking whether /usr/local/bin/gfortran supports Fortran 90 -- Checking whether /usr/local/bin/gfortran supports Fortran 90 -- yes Updating include/revision.h with: git commit: 51f69d7f222bffa3c97f1aa9521b39d3163fb99e git branch: (HEAD detached from 4b03ecd) 2016-03-27 12:24:02.586 system_profiler[77480:1103] httpdEnabled is deprecated !! -- Looking for Fortran dgemm -- Looking for Fortran dgemm - found -- Looking for pthread.h -- Looking for pthread.h - found -- Looking for pthread_create -- Looking for pthread_create - found -- Found Threads: TRUE -- A library with BLAS API found. -- Looking for Fortran cheev -- Looking for Fortran cheev - found -- A library with LAPACK API found. ================================= INFO: Could not find optional LEDA. Plese set LEDA_DIR. 3D Cut Cells will not be available. ================================= -- Found MPI_C: /usr/local/Cellar/open-mpi/1.10.1_1/lib/libmpi.dylib -- Found MPI_CXX: /usr/local/Cellar/open-mpi/1.10.1_1/lib/libmpi_cxx.dylib;/usr/local/Cellar/open-mpi/1.10.1_1/lib/libmpi.dylib -- Found MPI_Fortran: /usr/local/Cellar/open-mpi/1.10.1_1/lib/libmpi_usempif08.dylib;/usr/local/Cellar/open-mpi/1.10.1_1/lib/libmpi_usempi_ignore_tkr.a;/usr/local/Cellar/open-mpi/1.10.1_1/lib/libmpi_mpifh.dylib;/usr/local/Cellar/open-mpi/1.10.1_1/lib/libmpi.dylib ================================= !!!! WARNING !!!! The following unit tests are not compiled: PXCVTAdaptMechanics2d_PXU PXCVTBoundary1d_PXU PXMoveMesh3d_PXU PXQuadraticPatchKernel_PXU PXCompressibleUtilsNew_PXU --------------------------------- Could someone please fix or remove them? The list can be modified in CMakeLists.txt in the PX root directory ================================= ================================= Setting MPIEXEC_MAX_NUMPROCS to the minimum required 4 processors. ================================= -- Found OpenGL: /System/Library/Frameworks/OpenGL.framework -- Looking for XOpenDisplay in /usr/X11R6/lib/libX11.dylib;/usr/X11R6/lib/libXext.dylib -- Looking for XOpenDisplay in /usr/X11R6/lib/libX11.dylib;/usr/X11R6/lib/libXext.dylib - found -- Looking for gethostbyname -- Looking for gethostbyname - found -- Looking for connect -- Looking for connect - found -- Looking for remove -- Looking for remove - found -- Looking for shmat -- Looking for shmat - found -- Looking for IceConnectionNumber in ICE -- Looking for IceConnectionNumber in ICE - found -- Found X11: /usr/X11R6/lib/libX11.dylib -- Configuring done -- Generating done -- Build files have been written to: /Users/jenkins/workspace/ProjectX_Commit/PX_ARC/release_clang/buildnode/macys/platforms/release_clang + make bamg TetGen Qhull + make all Scanning dependencies of target StoreSVNRevision [ 0%] Built target StoreSVNRevision Scanning dependencies of target PX [ 0%] Building C object src/CMakeFiles/PX.dir/PXAdapt.c.o [ 0%] Building C object src/CMakeFiles/PX.dir/PXAdaptMetric.c.o [ 0%] Building C object src/CMakeFiles/PX.dir/PXAnisotropicMetric.c.o [ 0%] Building C object src/CMakeFiles/PX.dir/PXAuxVariable.c.o [ 0%] Building C object src/CMakeFiles/PX.dir/PXBC.c.o [ 0%] Building C object src/CMakeFiles/PX.dir/PXCDAll.c.o [ 0%] Building C object src/CMakeFiles/PX.dir/PXDGSolver.c.o [ 1%] Building C object src/CMakeFiles/PX.dir/PXDynamic.c.o [ 1%] Building C object src/CMakeFiles/PX.dir/PXErrEst.c.o [ 1%] Building C object src/CMakeFiles/PX.dir/PXHDGSolver.c.o [ 1%] Building C object src/CMakeFiles/PX.dir/PXHDGOutputFunctional.c.o [ 1%] Building C object src/CMakeFiles/PX.dir/PXHPAdapt.c.o [ 1%] Building C object src/CMakeFiles/PX.dir/PXHPAdaptDirect.c.o [ 1%] Building C object src/CMakeFiles/PX.dir/PXInit.c.o [ 1%] Building C object src/CMakeFiles/PX.dir/PXLog.c.o [ 1%] Building C object src/CMakeFiles/PX.dir/PXOutput.c.o [ 1%] Building C object src/CMakeFiles/PX.dir/PXOutputFunctional.c.o [ 3%] Building C object src/CMakeFiles/PX.dir/PXOutputFunctionalTools.c.o [ 3%] Building C object src/CMakeFiles/PX.dir/PXRegionAttribute.c.o [ 3%] Building C object src/CMakeFiles/PX.dir/PXResidual.c.o [ 3%] Building C object src/CMakeFiles/PX.dir/PXResState.c.o [ 3%] Building C object src/CMakeFiles/PX.dir/PXSensitivity.c.o [ 3%] Building C object src/CMakeFiles/PX.dir/PXShockCapture.c.o [ 3%] Building C object src/CMakeFiles/PX.dir/PXSolutionTransfer.c.o [ 3%] Building C object src/CMakeFiles/PX.dir/PXSolver.c.o [ 3%] Building C object src/CMakeFiles/PX.dir/PXTime.c.o [ 5%] Building C object src/CMakeFiles/PX.dir/PXUnsteady.c.o [ 5%] Linking C static library ../lib/libPX.a [ 5%] Built target PX Scanning dependencies of target PXEquationSet [ 5%] Building C object src/CMakeFiles/PXEquationSet.dir/PXEquationSet.c.o [ 5%] Linking C static library ../lib/libPXEquationSet.a [ 5%] Built target PXEquationSet Scanning dependencies of target PXFundamentals [ 5%] Building C object src/Fundamentals/CMakeFiles/PXFundamentals.dir/PX.c.o [ 5%] Building C object src/Fundamentals/CMakeFiles/PXFundamentals.dir/PXBasicStructures.c.o [ 5%] Building C object src/Fundamentals/CMakeFiles/PXFundamentals.dir/PXError.c.o [ 5%] Building C object src/Fundamentals/CMakeFiles/PXFundamentals.dir/PXHeap.c.o [ 5%] Building C object src/Fundamentals/CMakeFiles/PXFundamentals.dir/PXKDTree.c.o [ 5%] Building C object src/Fundamentals/CMakeFiles/PXFundamentals.dir/PXLapack.c.o [ 5%] Building C object src/Fundamentals/CMakeFiles/PXFundamentals.dir/PXMath.c.o [ 5%] Building C object src/Fundamentals/CMakeFiles/PXFundamentals.dir/PXMath_old.c.o [ 5%] Building C object src/Fundamentals/CMakeFiles/PXFundamentals.dir/PXMemory.c.o [ 7%] Building C object src/Fundamentals/CMakeFiles/PXFundamentals.dir/PXParameter.c.o [ 7%] Building C object src/Fundamentals/CMakeFiles/PXFundamentals.dir/PXString.c.o [ 7%] Building C object src/Fundamentals/CMakeFiles/PXFundamentals.dir/PXGeometry.c.o [ 7%] Building C object src/Fundamentals/CMakeFiles/PXFundamentals.dir/PXParallel.c.o [ 7%] Linking C static library ../../lib/libPXFundamentals.a [ 7%] Built target PXFundamentals Scanning dependencies of target PXAdaptMechanics [ 7%] Building C object src/Adaptation/CMakeFiles/PXAdaptMechanics.dir/PXMetricAdapt1d.c.o [ 7%] Building C object src/Adaptation/CMakeFiles/PXAdaptMechanics.dir/PXMetricAdapt2d.c.o [ 9%] Building C object src/Adaptation/CMakeFiles/PXAdaptMechanics.dir/PXMetricAdapt3d.c.o [ 9%] Building C object src/Adaptation/CMakeFiles/PXAdaptMechanics.dir/PXWriteMesherFiles.c.o [ 9%] Building C object src/Adaptation/CMakeFiles/PXAdaptMechanics.dir/PXGridAnisoRefine.c.o [ 9%] Building C object src/Adaptation/CMakeFiles/PXAdaptMechanics.dir/PXElasticMesher.c.o [ 9%] Linking C static library ../../lib/libPXAdaptMechanics.a [ 9%] Built target PXAdaptMechanics Scanning dependencies of target PXGrid [ 9%] Building C object src/Grid/CMakeFiles/PXGrid.dir/PXAttachmentMath.c.o [ 9%] Building C object src/Grid/CMakeFiles/PXGrid.dir/PXBasis.c.o [ 11%] Building C object src/Grid/CMakeFiles/PXGrid.dir/PXCoordinates.c.o Build was aborted clang: error: unable to execute command: Terminated: 15 [WARNINGS] Skipping publisher since build result is ABORTED clang: error: clang frontend command failed due to signal (use -v to see invocation) Apple LLVM version 6.0 (clang-600.0.57) (based on LLVM 3.5svn) Target: x86_64-apple-darwin13.4.0 Thread model: posix clang: note: diagnostic msg: PLEASE submit a bug report to http://developer.apple.com/bugreporter/ and include the crash backtrace, preprocessed source, and associated run script. clang: note: diagnostic msg: ******************** PLEASE ATTACH THE FOLLOWING FILES TO THE BUG REPORT: Preprocessed source(s) and associated run script(s) are located at: clang: note: diagnostic msg: /var/folders/wp/20zl4b2n0qxcrp90f31275f80000gp/T/PXCoordinates-26b5dc.c clang: note: diagnostic msg: /var/folders/wp/20zl4b2n0qxcrp90f31275f80000gp/T/PXCoordinates-26b5dc.sh clang: note: diagnostic msg: ******************** Skipping Cobertura coverage report as build was not UNSTABLE or better ... [xUnit] [INFO] - Starting to record. [xUnit] [INFO] - Processing CTest-Version N/A (default) make[3]: *** [src/Grid/CMakeFiles/PXGrid.dir/PXCoordinates.c.o] Error 254 make[2]: *** [src/Grid/CMakeFiles/PXGrid.dir/all] Error 2 make[1]: *** [all] Error 2 make: *** [default] Error 2 [xUnit] [INFO] - [CTest-Version N/A (default)] - No test report file(s) were found with the pattern 'platforms/release_clang/Testing/**/Test.xml' relative to '/Users/jenkins/workspace/ProjectX_Commit/PX_ARC/release_clang/buildnode/macys' for the testing framework 'CTest-Version N/A (default)'. Did you enter a pattern relative to the correct directory? Did you generate the result report(s) for 'CTest-Version N/A (default)'? [xUnit] [WARNING] - No test reports found for the metric 'CTest' with the resolved pattern 'platforms/release_clang/Testing/**/Test.xml'. [xUnit] [INFO] - Skipping the metric tool processing. [xUnit] [INFO] - There are errors when processing test results. [xUnit] [INFO] - Skipping tests recording. Warning: this build has no associated authentication, so build permissions may be lacking, and downstream projects which cannot even be seen by an anonymous user will be silently skipped Finished: ABORTED