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#269 (Oct 10, 2020, 1:52:09 AM)

  1. First pass at structuring TCNE pde, a little messy — blsc / detail
  2. TCNE stuff — ksabo / detail
  3. relocate QauxvInterpret forward declaration in prep for 3D stuff — shunz / detail
  4. Added basic stuff for 3D IBL — shunz / detail
  5. Minor cleanup — shunz / detail
  6. Initial pass on PDEIBL3D — shunz / detail
  7. Filled in 3D IBL closure with fully 3D components set to zero — shunz / detail
  8. Added BCNone for IBL3D — shunz / detail
  9. added a working version of sandbox case for IBL3D — shunz / detail
  10. Added a sheet grid of triangles in 3D for IBL3D — shunz / detail
  11. Added instantiation — shunz / detail
  12. Intermediate commit — shunz / detail
  13. Working on integrands for first 3D IBL case — shunz / detail
  14. More fixes to integrand classes for IBL3D — shunz / detail
  15. Fixed instantiations for IBL3D — shunz / detail
  16. Add explicit instantiations and fix typos in closure class — shunz / detail
  17. Initial version of local Cartesian basis construction for 3D IBL — shunz / detail
  18. Minor cleanup — shunz / detail
  19. Fix constuction of q1 and q2 vectors in case of stagnation flows — shunz / detail
  20. Add velocity gradient calculation in cell integrand of 3D IBL — shunz / detail
  21. Refactor and add a 2D stagnation flow test case — shunz / detail
  22. Add a 3D quad grid — shunz / detail
  23. Update cmake list for unit grid test — shunz / detail
  24. Fix typo in 3D quad sheet grid — shunz / detail
  25. fix bug in qauxv gradient calculation in 3D IBL cell integrand — shunz / detail
  26. Fix the scale and dimension of dissipation integral in 3D integral — shunz / detail
  27. fix a typo in thickness identity — shunz / detail
  28. Add more options to 3D IBL stagnation flow case, including quad grid, solution initialization, — shunz / detail
  29. one more bug fix in cell integrand for 3D IBL — shunz / detail
  30. Bugfix in calculation of trace unit normal vector for area cells in 3D — shunz / detail
  31. Add Nishida's crossflow closure.  Add pyrite check of stagnation flow case for 3D IBL.  Minor addition for debugging in PDEIBL3D — shunz / detail
  32. fix dependents of refactoring of GetSolnDofCell_IBL — shunz / detail
  33. Add a 3D flat plate source panel method but haven't tested yet — shunz / detail
  34. intermediate commit: minor clenaup and add guards. — shunz / detail
  35. intermediate commit: working on 3D coupled IBL for torpedo cass — shunz / detail
  36. add 3x3 equation system — shunz / detail
  37. typo fix. add partial instantiations for system 3x3 vector and matrix types — shunz / detail
  38. add linesearch data type for 3x3 equation system — shunz / detail
  39. add missing include — shunz / detail
  40. intermediate commit: fix many compiling errors in the way of running torpedo case for IBL3D. switching computer to continue the work... — shunz / detail
  41. refactor projection to Qauxi — shunz / detail
  42. add interior trace integrand for projection onto Qauxi — shunz / detail
  43. minor fix — shunz / detail
  44. add instantiations for IBL3D torpedo case — shunz / detail
  45. add instantiations for coupled IBL3D — shunz / detail
  46. remove unnecessary assert — shunz / detail
  47. fix for coupled IBL case to compile and run — shunz / detail
  48. fix uninitialized dummy DOFs — shunz / detail
  49. fix setDOFFrom in Qauxv 3D (missing q_y previously) — shunz / detail
  50. Coupled 3D IBL case converged on some simple variants of the torpedo case: linear and mildly nonlinear radial velocity distribution with attached laminar BLs — shunz / detail
  51. Tried triangle grid as well: fine on radially linear velocity distribution but couldn't converge on a more nonlinear case — shunz / detail
  52. cleaned up unused stuff — shunz / detail
  53. refactor SetIBLoutputCellGroup to accommodate both 3D and 2D IBL — shunz / detail
  54. remove outdated include — shunz / detail
  55. more refactoring of SetIBLoutputCellGroup for 3D IBL.  working progress.  switching computer — shunz / detail
  56. intermediate commit. switching computer. — shunz / detail
  57. enable tecplot output for 3D IBL — shunz / detail
  58. added PyDict options for Verbose and writeMarketMatrix for UMFPACK — allmaras / detail
  59. add full-state BC for IBL3D with corresponding boundary trace integrand.  verified on an uncoupled Blasius case — shunz / detail
  60. add a coupled IBL3D Blasius case — shunz / detail
  61. implement PTC for coupled IBL 3x3 system — shunz / detail
  62. add commented-out stuff for turning off laminar amplification and lag equations in IBL3D — shunz / detail
  63. fix typo in commented-out stuff — shunz / detail
  64. enable rotated mesh for IBL3D torpedo case — shunz / detail
  65. set up a torpedo with grid aligned with xy axes.  turned off laminar amplification and lag equations [need to be brought back after testing purely laminar BLs] — shunz / detail
  66. minor change to test case — shunz / detail
  67. minor refactoring on Blasius inflow BC params — shunz / detail
  68. rename test cases — shunz / detail
  69. speed up panel-related jacobian calculation using cached influence matrix in place of surrealized qauxifld — shunz / detail
  70. add jacobian timing for refactoring purpose — shunz / detail
  71. add similar (to DBL3) Falkner-Skan inflow bc for IBL3D with non-constant inflow state. set up a tornado case with rotated xy grid to compare with DBL3 — shunz / detail
  72. minor refactoring of test cases — shunz / detail
  73. remove trivial zero z velocity component to speed up panel method — shunz / detail
  74. minor refactoring — shunz / detail
  75. typo fix — shunz / detail
  76. precompute inviscid velocity for panel, which resulted in O(10) speedup in related residual calculation. fix DOF indexing in residual/jacobian precomputation — shunz / detail
  77. define macro to comment off some lines for timing/refactoring — shunz / detail
  78. minor comments — shunz / detail
  79. add ping test for coupled IBL in 3x3 block system — shunz / detail
  80. attempt to mirror tets in XField3D_Box_Tet_X1_WakeCut — allmaras / detail
  81. reverted to original prism-split coding; remainder of code is hard-coded for the — allmaras / detail
  82. fix typo in Cf2 closure, although it didn't change the torpedo case results much — shunz / detail
  83. Fix dot for VectorBlock — galbramc / detail
  84. added PyDict control of wake & Kutta Nitsche parameters — allmaras / detail
  85. Added test of sourceCoarse and sourceFine for RANSSA with artificial viscosity. — blsc / detail
  86. Added missing sourceCoarse and sourceFine functions from pressure gradient sensor and added unit test — blsc / detail
  87. added PyDict solve check option to UMFPACK; currently commented out actual check — allmaras / detail
  88. Fixes for checking the UMFPACK solve — galbramc / detail
  89. Missed adding PDEEulermitAVDiffusion2D.h to the commit. This file has specialized versions of sourceCoarse and sourceFine for a param that is a H-tensor and distance function. — blsc / detail
  90. add a wall term to dissipation relation of Nishida's closure, although it didn't affect things much — shunz / detail
  91. add a test case of fx67-k-170 airfoil — shunz / detail
  92. minor edit to output filenames at convergence failures — shunz / detail
  93. resolve merge conflict — shunz / detail
  94. changed default flux of IBL to LF flux — shunz / detail
  95. add a test case for drag polar — shunz / detail
  96. ran drag polar cases — shunz / detail
  97. refactored reference speed in transition model — shunz / detail
  98. typo fix — shunz / detail
  99. rename working directory — shunz / detail
  100. refator characteristic speed for PTC — shunz / detail
  101. refator characteristic speed for PTC — shunz / detail
  102. Add unit tests demonstrating that the step matrix calculation is stable to scaling — hcarson / detail
  103. update pyrite files — shunz / detail
  104. refactor 3D IBL closure API to allow for alternative closure models — shunz / detail
  105. save 3D closure relations in a separate header — shunz / detail
  106. add neural net closure for 3D IBL — shunz / detail
  107. run drag polar on finer grids — shunz / detail
  108. switch to run on acdl desktop — shunz / detail
  109. fix memory leak warning caused by accessing index -1 — shunz / detail
  110. minor update — shunz / detail
  111. mucking with PETSc for IBL3 — shunz / detail
  112. instantiate MKL_PARDISO solver for matrix block 3x3 — shunz / detail
  113. tried MKL_PARDISO solver for IBL3 — shunz / detail
  114. Adding test that Explicitly calculating the step from the metric directly is not unstable. Cases in 2D and 3D, showing stability to an AR of 2^10 in 3D, and 2^64 in 2D. — hcarson / detail
  115. minor typo fix — shunz / detail
  116. fix formatting — shunz / detail
  117. add mitLG BC for IBL3 — shunz / detail
  118. minor refactoring — shunz / detail
  119. switch to the same input parameters as DBL3 — shunz / detail
  120. add LF flux to IBL3 — shunz / detail
  121. Changes to ErrorModel to allow for the new exact nodal metric calculation — hcarson / detail
  122. Changes to ErrorModel to allow for the new exact nodal metric calculation — hcarson / detail
  123. pre merge add.... wth? — hcarson / detail
  124. add Dirichlet mitLG inflow BC to a Blasius flow test case — shunz / detail
  125. Jenkins fix — hcarson / detail
  126. reverting to the develop branch of ErrorModel — hcarson / detail
  127. fixes to case — hcarson / detail
  128. fixes to case — hcarson / detail
  129. intermediate commit: added 4-equation neural net closure model.  working on 4-equation IBL3D pde class — shunz / detail
  130. remove extraneous tamplate keyword — shunz / detail
  131. Various changes for arthur: Commented the adjoint_wo_p things from SolverInterface_VMSD_BR2, reducing the memory reqs. Made the Deltawing adapts more uniform and fit with the plan. Added the Solve case for the VMSD delta wing. — hcarson / detail
  132. added soruce terms for the lateral curvature equation of IBL3 — shunz / detail
  133. removed re-definition — shunz / detail
  134. refactored and added PDE and BC for four-equation 3D IBL class.  added a starting point for torpedo case — shunz / detail
  135. separated classes of 3D IBL and IBLFourEqn — shunz / detail
  136. generalized templates in IBL3-related integrands — shunz / detail
  137. added instantiations for four-equation 3D IBL — shunz / detail
  138. fixed instantiation typo — shunz / detail
  139. turned on verbose linesearch printout — shunz / detail
  140. added a visous-only Blasius case for 4-equation 3D IBL.  added a missing include — shunz / detail
  141. refactored reference coordinate gradient for speedup.  add/edit comments for clarity — shunz / detail
  142. typo fix: gradqe*E_qesq.  minor edits — shunz / detail
  143. turned off printout in unit testing — shunz / detail
  144. cosmetic changes — shunz / detail
  145. refactored neural net closure models: H22, Hd1, Hc2 — shunz / detail
  146. added output for four-equation 3D IBL — shunz / detail
  147. unit tests and associated modifications — ksabo / detail
  148. fixed auxi equation (wall transpiration): previous mass flux missed crossflow component — shunz / detail
  149. previous fix to wall transpiration (auxi equation) didn't fix.  it is now fixed.  added unit test — shunz / detail
  150. minor tweak — shunz / detail
  151. minor cleanup — shunz / detail
  152. add velocity gradient output to IBL — shunz / detail
  153. add instantiation — shunz / detail
  154. added IBL3 closure relations in the form of analytic formulae — shunz / detail
  155. tested something with git (still learning this thing) — ksabo / detail
  156. salt deposit #1 (updated files I accidentally erased...) — ksabo / detail
  157. refactored neural net closure implementation — shunz / detail
  158. recoded jacobianMasterState method, still need to test it — ksabo / detail
  159. added a set of IBL3 closure models based on analytic formulae — shunz / detail
  160. restored four-equation neural net closure to its original working state — shunz / detail
  161. switch to using 4-equation IBL3 closure based on analytic formulae.  results are similar or slightly better than neural net closure — shunz / detail
  162. fixed a typo (which fortunately wasn't used yet).  added exception throws — shunz / detail
  163. fixed include filename — shunz / detail
  164. removed redundant exceptions — shunz / detail
  165. Q1DConservative for TCNE is functionally completed (only needs aesthetic changes at this point) — ksabo / detail
  166. refactored four-eqn IBL3 curve-fit closure — shunz / detail
  167. conformed to vera check: should not use "using namespace" in header files — shunz / detail
  168. fixed unit tests for after API refactoring — shunz / detail
  169. fixed unit tests for the  previous API refactoring — shunz / detail
  170. fixed ping tests: finite difference step size — shunz / detail
  171. added ping test for four-eqn IBL3 — shunz / detail
  172. added Blasius flow test case for four-eqn IBL3D. some cleanup — shunz / detail
  173. added include — shunz / detail
  174. added includes — shunz / detail
  175. checked four-eqn IBL3D on Blasius case and stagnation radial flow — shunz / detail
  176. added a stagnation flow toy case.  mucked with IBL3 for torpedo case — shunz / detail
  177. fixed toy case to keep up with API refactoring — shunz / detail
  178. added missing include related to MPI — shunz / detail
  179. suppresed file dump in system test — shunz / detail
  180. added assertions — shunz / detail
  181. add some derivates to the IBL3 output — shunz / detail
  182. relaxed pyrite tolerance — shunz / detail
  183. relaxed pyrite tolerance for intel compiler.  speed up ping test to avoid time-out — shunz / detail
  184. renamed output — shunz / detail
  185. added and refactored IBL3 output — shunz / detail
  186. make verbose_ if-tests consistent throughout — allmaras / detail
  187. fixed screen dump for checkSolve_ when residuals above tolerance — allmaras / detail
  188. added option to dump solution at each Newton iteration — allmaras / detail
  189. added pressure gradient for space-time — allmaras / detail
  190. added instantiations, etc, needed for log(p) variables with look-up porosity/permeability tables — allmaras / detail
  191. added grid-Laplacian artificial viscosity for pressure; currently hard-coded diffusion coefficient — allmaras / detail
  192. trying to fix gnu9 compiler warning — shunz / detail
  193. added "#include <utilities>" for std::move; added unit test for VectorBlock_3 — allmaras / detail
  194. fixed vera line-length squawk — allmaras / detail
  195. fixed vera line-length squawk — allmaras / detail
  196. fixed vera line-length squawk — allmaras / detail
  197. add a new curve fit model based on low-dissipative DBL3 data — shunz / detail
  198. allow for uncoupled/viscou-only IBL3 solution by tweaking the panel method — shunz / detail
  199. fixed VectorBlock_3 unit test; made ::m() and ::n() static, so 2, 3, and 4 are all consistent — allmaras / detail
  200. forgot to save changes in the last commit... — shunz / detail
  201. relaxed Jenkins timeout threshold for some large ping tests — shunz / detail
  202. minor tweak — shunz / detail
  203. speed up ping test by turning off some redundant sub-block checks — shunz / detail
  204. fix cppcheck error — shunz / detail
  205. speed up ping test by turning off tests on some sub-blocks of the jacobian — shunz / detail
  206. added directory creation for output files — allmaras / detail
  207. Don't use python2 with jenkins — galbramc / detail
  208. removed old version of adjoint-compatible potential solver for Hershey wing — allmaras / detail
  209. temporarily disabled tests involving artificial viscosity fluxes if USE_PRESSURE_AV defined — allmaras / detail
  210. make VectorBlock test-suite names unique (so make unit_build works) — allmaras / detail
  211. added unit tests for circulation integrations — allmaras / detail
  212. added circulation integrations for lift & roll as functional outputs — allmaras / detail
  213. Add Q3 and Q4 elements to Gmsh IO — galbramc / detail
  214. clean-up of circulation-base functional code/test; added drag but #ifdef'ed out, as it's not complete — allmaras / detail
  215. intermediate commit: working on hooking up PETSc for block algebraic equation system — shunz / detail
  216. Fix finding macOS Accelerate BLAS — galbramc / detail
  217. cppcheck fixes for nightly — allmaras / detail
  218. moving back to develop — hcarson / detail
  219. add empty definition to fix undefined reference in weekly test — shunz / detail
  220. add empty definition to fix undefined reference in weekly test — shunz / detail
  221. add empty definition to fix undefined reference in weekly test — shunz / detail
  222. vera fix — hcarson / detail
  223. added a new set of closure relations based on low-dissipation DBL3 data — shunz / detail
  224. updated RthCf1 correlation coefficient — shunz / detail
  225. fixed call to undefined function — shunz / detail
  226. removing unneeded test — hcarson / detail
  227. minor updates to TCNE stuff (getting back into it) — ksabo / detail
  228. added mitLG BC for four equation IBL3D — shunz / detail
  229. fixing unused var — hcarson / detail
  230. Update for latest version of refine — galbramc / detail
  231. missing space — hcarson / detail
  232. Added vpr11@mit.edu to DeveloperEmailAddresses — vpr11 / detail
  233. End of week dump. — ksabo / detail
  234. added pressure jump into source for AV sensor in two-phase porous media — allmaras / detail
  235. minor changes to SPE10 test case: added #ifdef's for log(pn), table lookup; changed — allmaras / detail
  236. added #define label for pressure jump in AV sensor source; updated unit test — allmaras / detail
  237. added new closure option (but commented off for now). updated system test case for four-eqn IBL3D on stagnation flow BL — shunz / detail
  238. zero guard for smoothabs0 — allmaras / detail
  239. updated unit tests to incorporate pressure jumps in sensor source for two-phase AV — allmaras / detail
  240. Use 2 MPI processors on macOS with Jenkins. Make TetGen optional again. — galbramc / detail
  241. Fix for finding boost — galbramc / detail
  242. Some chemsitry model unit tests - need before source term testing. — ksabo / detail
  243. Fix for 2 MPI procs on macOS — galbramc / detail
  244. Various CMake fixes — galbramc / detail
  245. Fix BuildBoost — galbramc / detail
  246. vibrational relaxation time unit tests — ksabo / detail
  247. LIP solver can consume CAPS mesh — galbramc / detail
  248. Update minimum ESP version to 1.18 — galbramc / detail
  249. Relax EGADS version requirement — galbramc / detail
  250. Fix link error — galbramc / detail
  251. Missed a file — galbramc / detail
  252. More link error fixes — galbramc / detail
  253. More link fixes — galbramc / detail
  254. Exlicit Exception instantiations. Bias for Python 3 with CMake — galbramc / detail
  255. added continuousGlobalMap() for block 2x2 AES — shunz / detail
  256. PETSc now works for coupled IBL3 block AES 3x3 — shunz / detail
  257. minor refactoring — shunz / detail
  258. cleaned up and merged sandbox cases — shunz / detail
  259. use reference velocity scale consistently — shunz / detail
  260. turned on quasi-2D closure relations for 3-eq 3D IBL — shunz / detail
  261. Missed one instantiation. More optional TetGen fixes — galbramc / detail
  262. Various small fixes — galbramc / detail
  263. added exceptions for petsc MPI implementations for block AES 3x3 — shunz / detail
  264. turned off 3D IBL transition and lag equations for system test (for now) — shunz / detail
  265. turned off some TBD MPI stuff in petsc block AES 3x3 to avoid compiling errors — shunz / detail
  266. fixed unused variable warnings — shunz / detail
  267. fix compiling error in sandbox case — shunz / detail
  268. Added quasi-2D turbulent closure to four-eqn IBL3 formulation — shunz / detail
  269. fixed deprecated macro — shunz / detail
  270. First set of updates from cleaning up develop branch. Contains code and tests related to adding a spatially varying a-field (i.e. from previous adapt soln) in Homotopy — blsc / detail
  271. Removed sourceCoarse and sourceFine in lieu of sourceTraceJump — galbramc / detail
  272. Move Surreal into SANS namespace — galbramc / detail
  273. Forgot a file — galbramc / detail
  274. Missed MPI SurrealS — galbramc / detail
  275. Add missing include — galbramc / detail
  276. Remove SurrealS(Real,Real) constructor — galbramc / detail
  277. More fixes for modified Surreal — galbramc / detail
  278. Fix warnings — galbramc / detail
  279. Setup to run VMSDBR2 on fixed Joukowski meshes — galbramc / detail
  280. Fix uninitialized variable warnings — galbramc / detail
  281. Fix vera warning — galbramc / detail
  282. src/LinearAlgebra/ — blsc / detail
  283. First pass at prototyping a globally constrained algebraic equation set — blsc / detail
  284. Updates to globally constrained equations to include condensation of matrix in PETSc — blsc / detail
  285. Updates for first round of parallelizing the homotopy — blsc / detail
  286. Parallel homotopy appears to be working — blsc / detail
  287. EGADS interface refactoring. Added meanline blade. — galbramc / detail
  288. Fixes for EGTess — galbramc / detail
  289. More fixes to the EGADS cleanup — galbramc / detail
  290. More EGADS fixes — galbramc / detail
  291. Fix compile error — galbramc / detail
  292. Fix warning — galbramc / detail
  293. Fix more warnings — galbramc / detail
  294. A few tweeks on the homotopy and 3D set up — blsc / detail
  295. Updated interface for globally constrained equations so the jacobian for the pde and the constraints are in seperate functions — blsc / detail
  296. The small problem for static condensation is calculated on one processor then broadcast, that way there are on finite precision inconsistencies — blsc / detail
  297. Added template parameter to determine if (PETSc) should do a shur complement from block 2x2. Note, if we're not using PETSc, then the block matrix is solved as is. This is because the shur complement is only a work around for parallel communication issues. — blsc / detail
  298. ... because if you hard code tecplot for 4 levels of grid refinement on output you get a 300Gb tecplot file in 3D ... — blsc / detail
  299. Refactor CubicCamber. Add Normal vector field. — galbramc / detail
  300. Forgot files — galbramc / detail
  301. Add missing includes — galbramc / detail
  302. Number of global constraints is now a runtime option. The global coupling uses a CRS matrix structure, as opposed to MatrixD, since the CRS structure is already there. — blsc / detail
  303. Fixed bug with small system decomposition. The matrix was incorrectly sized for runtime constraints — blsc / detail
  304. Fix field normal vector check for parallel — galbramc / detail
  305. Resolved issues that came up due to merging — blsc / detail
  306. First pass at prototyping a globally constrained algebraic equation set — blsc / detail
  307. Updates to globally constrained equations to include condensation of matrix in PETSc — blsc / detail
  308. Updates for first round of parallelizing the homotopy — blsc / detail
  309. Parallel homotopy appears to be working — blsc / detail
  310. A few tweeks on the homotopy and 3D set up — blsc / detail
  311. Updated interface for globally constrained equations so the jacobian for the pde and the constraints are in seperate functions — blsc / detail
  312. The small problem for static condensation is calculated on one processor then broadcast, that way there are on finite precision inconsistencies — blsc / detail
  313. Added template parameter to determine if (PETSc) should do a shur complement from block 2x2. Note, if we're not using PETSc, then the block matrix is solved as is. This is because the shur complement is only a work around for parallel communication issues. — blsc / detail
  314. ... because if you hard code tecplot for 4 levels of grid refinement on output you get a 300Gb tecplot file in 3D ... — blsc / detail
  315. Number of global constraints is now a runtime option. The global coupling uses a CRS matrix structure, as opposed to MatrixD, since the CRS structure is already there. — blsc / detail
  316. Fixed bug with small system decomposition. The matrix was incorrectly sized for runtime constraints — blsc / detail
  317. Clean up after merging from develop — blsc / detail
  318. More merging issues — blsc / detail
  319. Added RotorSource for Euler equations — galbramc / detail
  320. Various small fixes — galbramc / detail
  321. Fix compile error — galbramc / detail
  322. A few more fixes — galbramc / detail
  323. Fix unit test error — galbramc / detail
  324. Bulk of unit tests done. — ksabo / detail
  325. Update refine libraries — galbramc / detail
  326. src/ — blsc / detail
  327. Missing unit tests and ability to daisy chain globally constrained algebraic equation sets — blsc / detail
  328. Missed an update for the serial version of PETSc — blsc / detail
  329. Further speed improvements — galbramc / detail
  330. Fix VMSDBR2 adjoint bug. Update refine build. — galbramc / detail
  331. Some fixes for the Rotor source — galbramc / detail
  332. Trying DG Normal vector field — galbramc / detail
  333. Correction to Rotor source — galbramc / detail
  334. One more fix to Rotor source — galbramc / detail
  335. One more fix — galbramc / detail
  336. updated file names — ksabo / detail
  337. updated file names (round 2) — ksabo / detail
  338. Fixed warnings and other minor things — ksabo / detail
  339. 150 char line error fix — ksabo / detail
  340. used brackets for matrix call, fixed now — ksabo / detail
  341. Some cleanup of PETSc Shur solve — galbramc / detail
  342. Fixes for MKL with Block 2x2 — galbramc / detail
  343. Bug fixes for homotopy and some 3D bugs — blsc / detail
  344. Fixed a few bug (undefined param and timeout) — blsc / detail
  345. fixed stack-buffer-overflow error in temperature data structures — ksabo / detail
  346. Missing instantiations, BC that only existed for local testing purposes removed. — blsc / detail
  347. fixed read access error from electron indexing bug — ksabo / detail
  348. fixed compiler warnings — ksabo / detail
  349. dropped tol to 1e-11 from 1e-12, removed extra {} that may have been causing an issue — ksabo / detail
  350. renamed test suite (explicitly added TCNE to name) - was causing conflict error — ksabo / detail
  351. SANS_Nightly fix, efma line compiler warning deleted — ksabo / detail
  352. updated reverse reaction rate temperature calculations — ksabo / detail
  353. Add trace quadrature checking to isValidCell_VMSD. — hcarson / detail
  354. Refactored global constraintes — galbramc / detail
  355. Forgot files — galbramc / detail
  356. Compile fixes — galbramc / detail
  357. Fix unit test — galbramc / detail
  358. Added a new ParamFieldBuilder specialization for (log-permeability, porosity, gen-H) param fields. Added a unit test. — savithru / detail
  359. added pde/IncompressibleNS — allmaras / detail
  360. added 1D incompressible NS for fully developed channel flow with sansLG Robin BCs — allmaras / detail
  361. added 2nd weighting parameter to weightBC; 1st parameter is for Dirichlet / adjoint state, — allmaras / detail
  362. added 2nd weighting parameter to weightBC; missed one file — allmaras / detail
  363. added Robin_sansLG BC catagory — allmaras / detail
  364. IO file check flag -> true — allmaras / detail
  365. 1D incompressible NS solver for fully developed channel flow — allmaras / detail
  366. bug fixes — allmaras / detail
  367. Major refactor of the two-phase PDE classes to support a (log-permeability, porosity) param-field. The artificial viscosity classes use a (log-permeability, porosity, log-H) param-field. — savithru / detail
  368. Updated ErrorEstimate_DGBR2 instantiations — savithru / detail
  369. Updated tests. All unit and system tests compile now. — savithru / detail
  370. added test for -Identity() initializer — allmaras / detail
  371. Fix so -DLA::Identity() works properly — galbramc / detail
  372. added BCs for 1D RANS-SA for channel flow — allmaras / detail
  373. unit tests for 1D RANS-SA for channel flow — allmaras / detail
  374. unit tests: missed one — allmaras / detail
  375. unit test output pattern test files — allmaras / detail
  376. 1D RANS-SA test case for fully developed channel flow -- preliminary — allmaras / detail
  377. updated test case — allmaras / detail
  378. More refactoring to get sandbox cases to compile. — savithru / detail
  379. Fixed a unit test. — savithru / detail
  380. Missed a sandbox case. — savithru / detail
  381. Reverting include path for boost output_test_stream — savithru / detail
  382. made algebraic eqn-set files more consistent between Galerkin and Galerkin_Stabilized — allmaras / detail
  383. instantiated VectorS<2> output — allmaras / detail
  384. Updated discretizations and PDE interfaces to use both paramL and paramR when evaluating fluxAdvectiveUpwind or fluxAdvectiveUpwindSpaceTime. This is important for the two-phase flow PDE, where the temporal flux depends on the porosity param-field value (which can be heterogeneous). — savithru / detail
  385. Update 2D ugrid reader for UNFORATTED (.r8.ugrid) files. — galbramc / detail
  386. Fix warning — galbramc / detail
  387. Fix warning — galbramc / detail
  388. added Robin BC dot product tests; currently commented out, since they fail to compile — allmaras / detail
  389. added Tensor-Vector dot-products: e.g. dot( VectorX, TensorMatrixQ ) — allmaras / detail
  390. clean up: MatrixS<D,D,MatrixQ> -> TensorMatrixQ — allmaras / detail
  391. needed additional #include's — allmaras / detail
  392. added ND ctor for BCs: BC( PDE, BCArgs ) — allmaras / detail
  393. added dist parameters to certain functions; added jacobianMasterState; code clean-up — allmaras / detail
  394. added skin friction / drag output for 1D incompressible NS channel flow — allmaras / detail
  395. added #if's to try different combinations of '(gradphi . K . nHat) betaBC^t rsdBC'; — allmaras / detail
  396. Updated FV-TPFA discretization to work for heterogeneous properties + some cleanup. — savithru / detail
  397. Added missing includes — savithru / detail
  398. removed dot-products supporting (K . nHat) operator in Robin_sansLG BCs, and reverted — allmaras / detail
  399. added IncompressibleNSLib to unit test builders — allmaras / detail
  400. latest sandbox tests for 1D fully developed channel flow — allmaras / detail
  401. Updated global contraints. Solve rotor speed at specified power. — galbramc / detail
  402. Compile fixes — galbramc / detail
  403. Add missing files — galbramc / detail
  404. added optional parameter to output_gnuplot for number of points per element (default remains 11) — allmaras / detail
  405. code cleanup for 1D NS/RANS — allmaras / detail
  406. solution function for 1D RANS: analytic law-of-the-wall for SA — allmaras / detail
  407. missed a pattern file — allmaras / detail
  408. missed a unit test file — allmaras / detail
  409. updated 1D RANS fully developed channel flow case to (a) work, (b) output useful data, — allmaras / detail
  410. Fix all output functionals to properly work in parallel — galbramc / detail
  411. name change for test suite to avoid link conflict for 'make unit' — allmaras / detail
  412. Fix compile error — galbramc / detail
  413. Compile fix — galbramc / detail
  414. Missing include — galbramc / detail
  415. More missing includes — galbramc / detail
  416. More missing includes — galbramc / detail
  417. reverted to depricated include directory for <boost/test/unit_test.hpp> — allmaras / detail
  418. More missing include fixes — galbramc / detail
  419. Upgrade to AFLR 10.8.7 — galbramc / detail
  420. Update AFLR libraries — galbramc / detail
  421. src/ — blsc / detail
  422. Updated BC::isValidState interface so mitState BCs can check if the boundary state generated is also valid — blsc / detail
  423. Removed file that didn't work out and shouldn't have been commited — blsc / detail
  424. Fix AFLR library order — galbramc / detail
  425. Formatting fixes — blsc / detail
  426. Missing instantiation and arguments flipped causing a unit test to fail — blsc / detail
  427. Fixes for AFLR4 and EGADS updates — galbramc / detail
  428. Fix for wake sheets — galbramc / detail
  429. Various small fixes — galbramc / detail
  430. Allow specified interior traces — galbramc / detail
  431. Compile fixes. Allow UnionJack to work in parallel — galbramc / detail
  432. Fix compile error — galbramc / detail
  433. removed 1D incompressible NS channel flow test case -- won't compile due to double — allmaras / detail
  434. Fixes for parallel specified interior traces. Added ParkMMS and EntropyProduction output. — galbramc / detail
  435. Forgot files — galbramc / detail
  436. Fixes for parallel interior traces — galbramc / detail
  437. Fix uninitialized data — galbramc / detail
  438. Fix intel warning — galbramc / detail
  439. Added new SPE10 cases for time-marching FV and DGBR2+AV. — savithru / detail
  440. Fix parallel DG DOF indexing for multiple cell groups — galbramc / detail
  441. fixes for jenkins squawks — allmaras / detail
  442. Fix EG zombies — galbramc / detail
  443. missing #include <vector> — allmaras / detail
  444. fixed warning for un-used typedef — allmaras / detail
  445. added isValidState with (x,time,nx,q) params for Dirichlet — allmaras / detail
  446. Hardening ReadSolution_PX to throw uniformly across MPI if rank 0 fails to load the file. Can now use try catch around restart blocks! — hcarson / detail
  447. fixed uninitialized variables in test — allmaras / detail
  448. removed redundant instantiation — allmaras / detail
  449. removed unneeded print statements and a typo — hcarson / detail
  450. Nightly fixes — galbramc / detail
  451. Various small fixes — galbramc / detail
  452. Fix to erroneous logic — hcarson / detail
  453. Make safe_at work for any container type, and reduce code duplication — hcarson / detail
  454. Nightly fixes — galbramc / detail
  455. More nightly fixes — galbramc / detail
  456. fixed nightly warning on unused variable — allmaras / detail
  457. Relax execution time — galbramc / detail
  458. Changed isValid to check: qbar + qp at cell quads, and qbar, qbar + qpL and qbar + qpR for interior traces. These are the only values used in flux evaluation — hcarson / detail
  459. Fix accross spelling. Fix AFLR3 to distribute in parallel. Update interior trace parallel construction. — galbramc / detail
  460. Reduce maximum grid size for PDESourceOnly_Projection_btest — galbramc / detail
  461. Add latest PETSc version — galbramc / detail
  462. Nightly fix — galbramc / detail
  463. Various CMake fixes — galbramc / detail
  464. Fix for building Tetgen — galbramc / detail
  465. Don't ues intel compiler to compile TetGen — galbramc / detail
  466. Nightly fix — galbramc / detail
  467. Relax tolerance for nightly test — galbramc / detail
  468. Update refine, TetGen, and AFLR. Added ParameterDictList for a list of dictionaries. Rename MeanlineBlade to CamberBlade. — galbramc / detail
  469. Correct AFLR version — galbramc / detail
  470. Forgot tetgen patch — galbramc / detail
  471. Various fixes — galbramc / detail
  472. Fix library order — galbramc / detail
  473. Relax ping tolerance — galbramc / detail
  474. Comment out file dump — galbramc / detail
  475. Nightly fixes — galbramc / detail
  476. Add python UI for body force calculations. — galbramc / detail
  477. Fix compile errors — galbramc / detail
  478. Fix warning — galbramc / detail
  479. Various compile fixes — galbramc / detail
  480. Some small fixes — galbramc / detail
  481. Fix interior trace partitioning — galbramc / detail
  482. Some small fixes — galbramc / detail
  483. Added the option to specify a reference permeability for the well model. Updated SPE10 test cases to use the permeabilities at the well locations. — savithru / detail
  484. Weekly fix — galbramc / detail

#268 (Oct 5, 2020, 8:00:27 AM)

  1. First pass at structuring TCNE pde, a little messy — blsc / detail
  2. TCNE stuff — ksabo / detail
  3. relocate QauxvInterpret forward declaration in prep for 3D stuff — shunz / detail
  4. Added basic stuff for 3D IBL — shunz / detail
  5. Minor cleanup — shunz / detail
  6. Initial pass on PDEIBL3D — shunz / detail
  7. Filled in 3D IBL closure with fully 3D components set to zero — shunz / detail
  8. Added BCNone for IBL3D — shunz / detail
  9. added a working version of sandbox case for IBL3D — shunz / detail
  10. Added a sheet grid of triangles in 3D for IBL3D — shunz / detail
  11. Added instantiation — shunz / detail
  12. Intermediate commit — shunz / detail
  13. Working on integrands for first 3D IBL case — shunz / detail
  14. More fixes to integrand classes for IBL3D — shunz / detail
  15. Fixed instantiations for IBL3D — shunz / detail
  16. Add explicit instantiations and fix typos in closure class — shunz / detail
  17. Initial version of local Cartesian basis construction for 3D IBL — shunz / detail
  18. Minor cleanup — shunz / detail
  19. Fix constuction of q1 and q2 vectors in case of stagnation flows — shunz / detail
  20. Add velocity gradient calculation in cell integrand of 3D IBL — shunz / detail
  21. Refactor and add a 2D stagnation flow test case — shunz / detail
  22. Add a 3D quad grid — shunz / detail
  23. Update cmake list for unit grid test — shunz / detail
  24. Fix typo in 3D quad sheet grid — shunz / detail
  25. fix bug in qauxv gradient calculation in 3D IBL cell integrand — shunz / detail
  26. Fix the scale and dimension of dissipation integral in 3D integral — shunz / detail
  27. fix a typo in thickness identity — shunz / detail
  28. Add more options to 3D IBL stagnation flow case, including quad grid, solution initialization, — shunz / detail
  29. one more bug fix in cell integrand for 3D IBL — shunz / detail
  30. Bugfix in calculation of trace unit normal vector for area cells in 3D — shunz / detail
  31. Add Nishida's crossflow closure.  Add pyrite check of stagnation flow case for 3D IBL.  Minor addition for debugging in PDEIBL3D — shunz / detail
  32. fix dependents of refactoring of GetSolnDofCell_IBL — shunz / detail
  33. Add a 3D flat plate source panel method but haven't tested yet — shunz / detail
  34. intermediate commit: minor clenaup and add guards. — shunz / detail
  35. intermediate commit: working on 3D coupled IBL for torpedo cass — shunz / detail
  36. add 3x3 equation system — shunz / detail
  37. typo fix. add partial instantiations for system 3x3 vector and matrix types — shunz / detail
  38. add linesearch data type for 3x3 equation system — shunz / detail
  39. add missing include — shunz / detail
  40. intermediate commit: fix many compiling errors in the way of running torpedo case for IBL3D. switching computer to continue the work... — shunz / detail
  41. refactor projection to Qauxi — shunz / detail
  42. add interior trace integrand for projection onto Qauxi — shunz / detail
  43. minor fix — shunz / detail
  44. add instantiations for IBL3D torpedo case — shunz / detail
  45. add instantiations for coupled IBL3D — shunz / detail
  46. remove unnecessary assert — shunz / detail
  47. fix for coupled IBL case to compile and run — shunz / detail
  48. fix uninitialized dummy DOFs — shunz / detail
  49. fix setDOFFrom in Qauxv 3D (missing q_y previously) — shunz / detail
  50. Coupled 3D IBL case converged on some simple variants of the torpedo case: linear and mildly nonlinear radial velocity distribution with attached laminar BLs — shunz / detail
  51. Tried triangle grid as well: fine on radially linear velocity distribution but couldn't converge on a more nonlinear case — shunz / detail
  52. cleaned up unused stuff — shunz / detail
  53. refactor SetIBLoutputCellGroup to accommodate both 3D and 2D IBL — shunz / detail
  54. remove outdated include — shunz / detail
  55. more refactoring of SetIBLoutputCellGroup for 3D IBL.  working progress.  switching computer — shunz / detail
  56. intermediate commit. switching computer. — shunz / detail
  57. enable tecplot output for 3D IBL — shunz / detail
  58. added PyDict options for Verbose and writeMarketMatrix for UMFPACK — allmaras / detail
  59. add full-state BC for IBL3D with corresponding boundary trace integrand.  verified on an uncoupled Blasius case — shunz / detail
  60. add a coupled IBL3D Blasius case — shunz / detail
  61. implement PTC for coupled IBL 3x3 system — shunz / detail
  62. add commented-out stuff for turning off laminar amplification and lag equations in IBL3D — shunz / detail
  63. fix typo in commented-out stuff — shunz / detail
  64. enable rotated mesh for IBL3D torpedo case — shunz / detail
  65. set up a torpedo with grid aligned with xy axes.  turned off laminar amplification and lag equations [need to be brought back after testing purely laminar BLs] — shunz / detail
  66. minor change to test case — shunz / detail
  67. minor refactoring on Blasius inflow BC params — shunz / detail
  68. rename test cases — shunz / detail
  69. speed up panel-related jacobian calculation using cached influence matrix in place of surrealized qauxifld — shunz / detail
  70. add jacobian timing for refactoring purpose — shunz / detail
  71. add similar (to DBL3) Falkner-Skan inflow bc for IBL3D with non-constant inflow state. set up a tornado case with rotated xy grid to compare with DBL3 — shunz / detail
  72. minor refactoring of test cases — shunz / detail
  73. remove trivial zero z velocity component to speed up panel method — shunz / detail
  74. minor refactoring — shunz / detail
  75. typo fix — shunz / detail
  76. precompute inviscid velocity for panel, which resulted in O(10) speedup in related residual calculation. fix DOF indexing in residual/jacobian precomputation — shunz / detail
  77. define macro to comment off some lines for timing/refactoring — shunz / detail
  78. minor comments — shunz / detail
  79. add ping test for coupled IBL in 3x3 block system — shunz / detail
  80. attempt to mirror tets in XField3D_Box_Tet_X1_WakeCut — allmaras / detail
  81. reverted to original prism-split coding; remainder of code is hard-coded for the — allmaras / detail
  82. fix typo in Cf2 closure, although it didn't change the torpedo case results much — shunz / detail
  83. Fix dot for VectorBlock — galbramc / detail
  84. added PyDict control of wake & Kutta Nitsche parameters — allmaras / detail
  85. Added test of sourceCoarse and sourceFine for RANSSA with artificial viscosity. — blsc / detail
  86. Added missing sourceCoarse and sourceFine functions from pressure gradient sensor and added unit test — blsc / detail
  87. added PyDict solve check option to UMFPACK; currently commented out actual check — allmaras / detail
  88. Fixes for checking the UMFPACK solve — galbramc / detail
  89. Missed adding PDEEulermitAVDiffusion2D.h to the commit. This file has specialized versions of sourceCoarse and sourceFine for a param that is a H-tensor and distance function. — blsc / detail
  90. add a wall term to dissipation relation of Nishida's closure, although it didn't affect things much — shunz / detail
  91. add a test case of fx67-k-170 airfoil — shunz / detail
  92. minor edit to output filenames at convergence failures — shunz / detail
  93. resolve merge conflict — shunz / detail
  94. changed default flux of IBL to LF flux — shunz / detail
  95. add a test case for drag polar — shunz / detail
  96. ran drag polar cases — shunz / detail
  97. refactored reference speed in transition model — shunz / detail
  98. typo fix — shunz / detail
  99. rename working directory — shunz / detail
  100. refator characteristic speed for PTC — shunz / detail
  101. refator characteristic speed for PTC — shunz / detail
  102. Add unit tests demonstrating that the step matrix calculation is stable to scaling — hcarson / detail
  103. update pyrite files — shunz / detail
  104. refactor 3D IBL closure API to allow for alternative closure models — shunz / detail
  105. save 3D closure relations in a separate header — shunz / detail
  106. add neural net closure for 3D IBL — shunz / detail
  107. run drag polar on finer grids — shunz / detail
  108. switch to run on acdl desktop — shunz / detail
  109. fix memory leak warning caused by accessing index -1 — shunz / detail
  110. minor update — shunz / detail
  111. mucking with PETSc for IBL3 — shunz / detail
  112. instantiate MKL_PARDISO solver for matrix block 3x3 — shunz / detail
  113. tried MKL_PARDISO solver for IBL3 — shunz / detail
  114. Adding test that Explicitly calculating the step from the metric directly is not unstable. Cases in 2D and 3D, showing stability to an AR of 2^10 in 3D, and 2^64 in 2D. — hcarson / detail
  115. minor typo fix — shunz / detail
  116. fix formatting — shunz / detail
  117. add mitLG BC for IBL3 — shunz / detail
  118. minor refactoring — shunz / detail
  119. switch to the same input parameters as DBL3 — shunz / detail
  120. add LF flux to IBL3 — shunz / detail
  121. Changes to ErrorModel to allow for the new exact nodal metric calculation — hcarson / detail
  122. Changes to ErrorModel to allow for the new exact nodal metric calculation — hcarson / detail
  123. pre merge add.... wth? — hcarson / detail
  124. add Dirichlet mitLG inflow BC to a Blasius flow test case — shunz / detail
  125. Jenkins fix — hcarson / detail
  126. reverting to the develop branch of ErrorModel — hcarson / detail
  127. fixes to case — hcarson / detail
  128. fixes to case — hcarson / detail
  129. intermediate commit: added 4-equation neural net closure model.  working on 4-equation IBL3D pde class — shunz / detail
  130. remove extraneous tamplate keyword — shunz / detail
  131. Various changes for arthur: Commented the adjoint_wo_p things from SolverInterface_VMSD_BR2, reducing the memory reqs. Made the Deltawing adapts more uniform and fit with the plan. Added the Solve case for the VMSD delta wing. — hcarson / detail
  132. added soruce terms for the lateral curvature equation of IBL3 — shunz / detail
  133. removed re-definition — shunz / detail
  134. refactored and added PDE and BC for four-equation 3D IBL class.  added a starting point for torpedo case — shunz / detail
  135. separated classes of 3D IBL and IBLFourEqn — shunz / detail
  136. generalized templates in IBL3-related integrands — shunz / detail
  137. added instantiations for four-equation 3D IBL — shunz / detail
  138. fixed instantiation typo — shunz / detail
  139. turned on verbose linesearch printout — shunz / detail
  140. added a visous-only Blasius case for 4-equation 3D IBL.  added a missing include — shunz / detail
  141. refactored reference coordinate gradient for speedup.  add/edit comments for clarity — shunz / detail
  142. typo fix: gradqe*E_qesq.  minor edits — shunz / detail
  143. turned off printout in unit testing — shunz / detail
  144. cosmetic changes — shunz / detail
  145. refactored neural net closure models: H22, Hd1, Hc2 — shunz / detail
  146. added output for four-equation 3D IBL — shunz / detail
  147. unit tests and associated modifications — ksabo / detail
  148. fixed auxi equation (wall transpiration): previous mass flux missed crossflow component — shunz / detail
  149. previous fix to wall transpiration (auxi equation) didn't fix.  it is now fixed.  added unit test — shunz / detail
  150. minor tweak — shunz / detail
  151. minor cleanup — shunz / detail
  152. add velocity gradient output to IBL — shunz / detail
  153. add instantiation — shunz / detail
  154. added IBL3 closure relations in the form of analytic formulae — shunz / detail
  155. tested something with git (still learning this thing) — ksabo / detail
  156. salt deposit #1 (updated files I accidentally erased...) — ksabo / detail
  157. refactored neural net closure implementation — shunz / detail
  158. recoded jacobianMasterState method, still need to test it — ksabo / detail
  159. added a set of IBL3 closure models based on analytic formulae — shunz / detail
  160. restored four-equation neural net closure to its original working state — shunz / detail
  161. switch to using 4-equation IBL3 closure based on analytic formulae.  results are similar or slightly better than neural net closure — shunz / detail
  162. fixed a typo (which fortunately wasn't used yet).  added exception throws — shunz / detail
  163. fixed include filename — shunz / detail
  164. removed redundant exceptions — shunz / detail
  165. Q1DConservative for TCNE is functionally completed (only needs aesthetic changes at this point) — ksabo / detail
  166. refactored four-eqn IBL3 curve-fit closure — shunz / detail
  167. conformed to vera check: should not use "using namespace" in header files — shunz / detail
  168. fixed unit tests for after API refactoring — shunz / detail
  169. fixed unit tests for the  previous API refactoring — shunz / detail
  170. fixed ping tests: finite difference step size — shunz / detail
  171. added ping test for four-eqn IBL3 — shunz / detail
  172. added Blasius flow test case for four-eqn IBL3D. some cleanup — shunz / detail
  173. added include — shunz / detail
  174. added includes — shunz / detail
  175. checked four-eqn IBL3D on Blasius case and stagnation radial flow — shunz / detail
  176. added a stagnation flow toy case.  mucked with IBL3 for torpedo case — shunz / detail
  177. fixed toy case to keep up with API refactoring — shunz / detail
  178. added missing include related to MPI — shunz / detail
  179. suppresed file dump in system test — shunz / detail
  180. added assertions — shunz / detail
  181. add some derivates to the IBL3 output — shunz / detail
  182. relaxed pyrite tolerance — shunz / detail
  183. relaxed pyrite tolerance for intel compiler.  speed up ping test to avoid time-out — shunz / detail
  184. renamed output — shunz / detail
  185. added and refactored IBL3 output — shunz / detail
  186. make verbose_ if-tests consistent throughout — allmaras / detail
  187. fixed screen dump for checkSolve_ when residuals above tolerance — allmaras / detail
  188. added option to dump solution at each Newton iteration — allmaras / detail
  189. added pressure gradient for space-time — allmaras / detail
  190. added instantiations, etc, needed for log(p) variables with look-up porosity/permeability tables — allmaras / detail
  191. added grid-Laplacian artificial viscosity for pressure; currently hard-coded diffusion coefficient — allmaras / detail
  192. trying to fix gnu9 compiler warning — shunz / detail
  193. added "#include <utilities>" for std::move; added unit test for VectorBlock_3 — allmaras / detail
  194. fixed vera line-length squawk — allmaras / detail
  195. fixed vera line-length squawk — allmaras / detail
  196. fixed vera line-length squawk — allmaras / detail
  197. add a new curve fit model based on low-dissipative DBL3 data — shunz / detail
  198. allow for uncoupled/viscou-only IBL3 solution by tweaking the panel method — shunz / detail
  199. fixed VectorBlock_3 unit test; made ::m() and ::n() static, so 2, 3, and 4 are all consistent — allmaras / detail
  200. forgot to save changes in the last commit... — shunz / detail
  201. relaxed Jenkins timeout threshold for some large ping tests — shunz / detail
  202. minor tweak — shunz / detail
  203. speed up ping test by turning off some redundant sub-block checks — shunz / detail
  204. fix cppcheck error — shunz / detail
  205. speed up ping test by turning off tests on some sub-blocks of the jacobian — shunz / detail
  206. added directory creation for output files — allmaras / detail
  207. Don't use python2 with jenkins — galbramc / detail
  208. removed old version of adjoint-compatible potential solver for Hershey wing — allmaras / detail
  209. temporarily disabled tests involving artificial viscosity fluxes if USE_PRESSURE_AV defined — allmaras / detail
  210. make VectorBlock test-suite names unique (so make unit_build works) — allmaras / detail
  211. added unit tests for circulation integrations — allmaras / detail
  212. added circulation integrations for lift & roll as functional outputs — allmaras / detail
  213. Add Q3 and Q4 elements to Gmsh IO — galbramc / detail
  214. clean-up of circulation-base functional code/test; added drag but #ifdef'ed out, as it's not complete — allmaras / detail
  215. intermediate commit: working on hooking up PETSc for block algebraic equation system — shunz / detail
  216. Fix finding macOS Accelerate BLAS — galbramc / detail
  217. cppcheck fixes for nightly — allmaras / detail
  218. moving back to develop — hcarson / detail
  219. add empty definition to fix undefined reference in weekly test — shunz / detail
  220. add empty definition to fix undefined reference in weekly test — shunz / detail
  221. add empty definition to fix undefined reference in weekly test — shunz / detail
  222. vera fix — hcarson / detail
  223. added a new set of closure relations based on low-dissipation DBL3 data — shunz / detail
  224. updated RthCf1 correlation coefficient — shunz / detail
  225. fixed call to undefined function — shunz / detail
  226. removing unneeded test — hcarson / detail
  227. minor updates to TCNE stuff (getting back into it) — ksabo / detail
  228. added mitLG BC for four equation IBL3D — shunz / detail
  229. fixing unused var — hcarson / detail
  230. Update for latest version of refine — galbramc / detail
  231. missing space — hcarson / detail
  232. Added vpr11@mit.edu to DeveloperEmailAddresses — vpr11 / detail
  233. End of week dump. — ksabo / detail
  234. added pressure jump into source for AV sensor in two-phase porous media — allmaras / detail
  235. minor changes to SPE10 test case: added #ifdef's for log(pn), table lookup; changed — allmaras / detail
  236. added #define label for pressure jump in AV sensor source; updated unit test — allmaras / detail
  237. added new closure option (but commented off for now). updated system test case for four-eqn IBL3D on stagnation flow BL — shunz / detail
  238. zero guard for smoothabs0 — allmaras / detail
  239. updated unit tests to incorporate pressure jumps in sensor source for two-phase AV — allmaras / detail
  240. Use 2 MPI processors on macOS with Jenkins. Make TetGen optional again. — galbramc / detail
  241. Fix for finding boost — galbramc / detail
  242. Some chemsitry model unit tests - need before source term testing. — ksabo / detail
  243. Fix for 2 MPI procs on macOS — galbramc / detail
  244. Various CMake fixes — galbramc / detail
  245. Fix BuildBoost — galbramc / detail
  246. vibrational relaxation time unit tests — ksabo / detail
  247. LIP solver can consume CAPS mesh — galbramc / detail
  248. Update minimum ESP version to 1.18 — galbramc / detail
  249. Relax EGADS version requirement — galbramc / detail
  250. Fix link error — galbramc / detail
  251. Missed a file — galbramc / detail
  252. More link error fixes — galbramc / detail
  253. More link fixes — galbramc / detail
  254. Exlicit Exception instantiations. Bias for Python 3 with CMake — galbramc / detail
  255. added continuousGlobalMap() for block 2x2 AES — shunz / detail
  256. PETSc now works for coupled IBL3 block AES 3x3 — shunz / detail
  257. minor refactoring — shunz / detail
  258. cleaned up and merged sandbox cases — shunz / detail
  259. use reference velocity scale consistently — shunz / detail
  260. turned on quasi-2D closure relations for 3-eq 3D IBL — shunz / detail
  261. Missed one instantiation. More optional TetGen fixes — galbramc / detail
  262. Various small fixes — galbramc / detail
  263. added exceptions for petsc MPI implementations for block AES 3x3 — shunz / detail
  264. turned off 3D IBL transition and lag equations for system test (for now) — shunz / detail
  265. turned off some TBD MPI stuff in petsc block AES 3x3 to avoid compiling errors — shunz / detail
  266. fixed unused variable warnings — shunz / detail
  267. fix compiling error in sandbox case — shunz / detail
  268. Added quasi-2D turbulent closure to four-eqn IBL3 formulation — shunz / detail
  269. fixed deprecated macro — shunz / detail
  270. First set of updates from cleaning up develop branch. Contains code and tests related to adding a spatially varying a-field (i.e. from previous adapt soln) in Homotopy — blsc / detail
  271. Removed sourceCoarse and sourceFine in lieu of sourceTraceJump — galbramc / detail
  272. Move Surreal into SANS namespace — galbramc / detail
  273. Forgot a file — galbramc / detail
  274. Missed MPI SurrealS — galbramc / detail
  275. Add missing include — galbramc / detail
  276. Remove SurrealS(Real,Real) constructor — galbramc / detail
  277. More fixes for modified Surreal — galbramc / detail
  278. Fix warnings — galbramc / detail
  279. Setup to run VMSDBR2 on fixed Joukowski meshes — galbramc / detail
  280. Fix uninitialized variable warnings — galbramc / detail
  281. Fix vera warning — galbramc / detail
  282. src/LinearAlgebra/ — blsc / detail
  283. First pass at prototyping a globally constrained algebraic equation set — blsc / detail
  284. Updates to globally constrained equations to include condensation of matrix in PETSc — blsc / detail
  285. Updates for first round of parallelizing the homotopy — blsc / detail
  286. Parallel homotopy appears to be working — blsc / detail
  287. EGADS interface refactoring. Added meanline blade. — galbramc / detail
  288. Fixes for EGTess — galbramc / detail
  289. More fixes to the EGADS cleanup — galbramc / detail
  290. More EGADS fixes — galbramc / detail
  291. Fix compile error — galbramc / detail
  292. Fix warning — galbramc / detail
  293. Fix more warnings — galbramc / detail
  294. A few tweeks on the homotopy and 3D set up — blsc / detail
  295. Updated interface for globally constrained equations so the jacobian for the pde and the constraints are in seperate functions — blsc / detail
  296. The small problem for static condensation is calculated on one processor then broadcast, that way there are on finite precision inconsistencies — blsc / detail
  297. Added template parameter to determine if (PETSc) should do a shur complement from block 2x2. Note, if we're not using PETSc, then the block matrix is solved as is. This is because the shur complement is only a work around for parallel communication issues. — blsc / detail
  298. ... because if you hard code tecplot for 4 levels of grid refinement on output you get a 300Gb tecplot file in 3D ... — blsc / detail
  299. Refactor CubicCamber. Add Normal vector field. — galbramc / detail
  300. Forgot files — galbramc / detail
  301. Add missing includes — galbramc / detail
  302. Number of global constraints is now a runtime option. The global coupling uses a CRS matrix structure, as opposed to MatrixD, since the CRS structure is already there. — blsc / detail
  303. Fixed bug with small system decomposition. The matrix was incorrectly sized for runtime constraints — blsc / detail
  304. Fix field normal vector check for parallel — galbramc / detail
  305. Resolved issues that came up due to merging — blsc / detail
  306. First pass at prototyping a globally constrained algebraic equation set — blsc / detail
  307. Updates to globally constrained equations to include condensation of matrix in PETSc — blsc / detail
  308. Updates for first round of parallelizing the homotopy — blsc / detail
  309. Parallel homotopy appears to be working — blsc / detail
  310. A few tweeks on the homotopy and 3D set up — blsc / detail
  311. Updated interface for globally constrained equations so the jacobian for the pde and the constraints are in seperate functions — blsc / detail
  312. The small problem for static condensation is calculated on one processor then broadcast, that way there are on finite precision inconsistencies — blsc / detail
  313. Added template parameter to determine if (PETSc) should do a shur complement from block 2x2. Note, if we're not using PETSc, then the block matrix is solved as is. This is because the shur complement is only a work around for parallel communication issues. — blsc / detail
  314. ... because if you hard code tecplot for 4 levels of grid refinement on output you get a 300Gb tecplot file in 3D ... — blsc / detail
  315. Number of global constraints is now a runtime option. The global coupling uses a CRS matrix structure, as opposed to MatrixD, since the CRS structure is already there. — blsc / detail
  316. Fixed bug with small system decomposition. The matrix was incorrectly sized for runtime constraints — blsc / detail
  317. Clean up after merging from develop — blsc / detail
  318. More merging issues — blsc / detail
  319. Added RotorSource for Euler equations — galbramc / detail
  320. Various small fixes — galbramc / detail
  321. Fix compile error — galbramc / detail
  322. A few more fixes — galbramc / detail
  323. Fix unit test error — galbramc / detail
  324. Bulk of unit tests done. — ksabo / detail
  325. Update refine libraries — galbramc / detail
  326. src/ — blsc / detail
  327. Missing unit tests and ability to daisy chain globally constrained algebraic equation sets — blsc / detail
  328. Missed an update for the serial version of PETSc — blsc / detail
  329. Further speed improvements — galbramc / detail
  330. Fix VMSDBR2 adjoint bug. Update refine build. — galbramc / detail
  331. Some fixes for the Rotor source — galbramc / detail
  332. Trying DG Normal vector field — galbramc / detail
  333. Correction to Rotor source — galbramc / detail
  334. One more fix to Rotor source — galbramc / detail
  335. One more fix — galbramc / detail
  336. updated file names — ksabo / detail
  337. updated file names (round 2) — ksabo / detail
  338. Fixed warnings and other minor things — ksabo / detail
  339. 150 char line error fix — ksabo / detail
  340. used brackets for matrix call, fixed now — ksabo / detail
  341. Some cleanup of PETSc Shur solve — galbramc / detail
  342. Fixes for MKL with Block 2x2 — galbramc / detail
  343. Bug fixes for homotopy and some 3D bugs — blsc / detail
  344. Fixed a few bug (undefined param and timeout) — blsc / detail
  345. fixed stack-buffer-overflow error in temperature data structures — ksabo / detail
  346. Missing instantiations, BC that only existed for local testing purposes removed. — blsc / detail
  347. fixed read access error from electron indexing bug — ksabo / detail
  348. fixed compiler warnings — ksabo / detail
  349. dropped tol to 1e-11 from 1e-12, removed extra {} that may have been causing an issue — ksabo / detail
  350. renamed test suite (explicitly added TCNE to name) - was causing conflict error — ksabo / detail
  351. SANS_Nightly fix, efma line compiler warning deleted — ksabo / detail
  352. updated reverse reaction rate temperature calculations — ksabo / detail
  353. Add trace quadrature checking to isValidCell_VMSD. — hcarson / detail
  354. Refactored global constraintes — galbramc / detail
  355. Forgot files — galbramc / detail
  356. Compile fixes — galbramc / detail
  357. Fix unit test — galbramc / detail
  358. Added a new ParamFieldBuilder specialization for (log-permeability, porosity, gen-H) param fields. Added a unit test. — savithru / detail
  359. added pde/IncompressibleNS — allmaras / detail
  360. added 1D incompressible NS for fully developed channel flow with sansLG Robin BCs — allmaras / detail
  361. added 2nd weighting parameter to weightBC; 1st parameter is for Dirichlet / adjoint state, — allmaras / detail
  362. added 2nd weighting parameter to weightBC; missed one file — allmaras / detail
  363. added Robin_sansLG BC catagory — allmaras / detail
  364. IO file check flag -> true — allmaras / detail
  365. 1D incompressible NS solver for fully developed channel flow — allmaras / detail
  366. bug fixes — allmaras / detail
  367. Major refactor of the two-phase PDE classes to support a (log-permeability, porosity) param-field. The artificial viscosity classes use a (log-permeability, porosity, log-H) param-field. — savithru / detail
  368. Updated ErrorEstimate_DGBR2 instantiations — savithru / detail
  369. Updated tests. All unit and system tests compile now. — savithru / detail
  370. added test for -Identity() initializer — allmaras / detail
  371. Fix so -DLA::Identity() works properly — galbramc / detail
  372. added BCs for 1D RANS-SA for channel flow — allmaras / detail
  373. unit tests for 1D RANS-SA for channel flow — allmaras / detail
  374. unit tests: missed one — allmaras / detail
  375. unit test output pattern test files — allmaras / detail
  376. 1D RANS-SA test case for fully developed channel flow -- preliminary — allmaras / detail
  377. updated test case — allmaras / detail
  378. More refactoring to get sandbox cases to compile. — savithru / detail
  379. Fixed a unit test. — savithru / detail
  380. Missed a sandbox case. — savithru / detail
  381. Reverting include path for boost output_test_stream — savithru / detail
  382. made algebraic eqn-set files more consistent between Galerkin and Galerkin_Stabilized — allmaras / detail
  383. instantiated VectorS<2> output — allmaras / detail
  384. Updated discretizations and PDE interfaces to use both paramL and paramR when evaluating fluxAdvectiveUpwind or fluxAdvectiveUpwindSpaceTime. This is important for the two-phase flow PDE, where the temporal flux depends on the porosity param-field value (which can be heterogeneous). — savithru / detail
  385. Update 2D ugrid reader for UNFORATTED (.r8.ugrid) files. — galbramc / detail
  386. Fix warning — galbramc / detail
  387. Fix warning — galbramc / detail
  388. added Robin BC dot product tests; currently commented out, since they fail to compile — allmaras / detail
  389. added Tensor-Vector dot-products: e.g. dot( VectorX, TensorMatrixQ ) — allmaras / detail
  390. clean up: MatrixS<D,D,MatrixQ> -> TensorMatrixQ — allmaras / detail
  391. needed additional #include's — allmaras / detail
  392. added ND ctor for BCs: BC( PDE, BCArgs ) — allmaras / detail
  393. added dist parameters to certain functions; added jacobianMasterState; code clean-up — allmaras / detail
  394. added skin friction / drag output for 1D incompressible NS channel flow — allmaras / detail
  395. added #if's to try different combinations of '(gradphi . K . nHat) betaBC^t rsdBC'; — allmaras / detail
  396. Updated FV-TPFA discretization to work for heterogeneous properties + some cleanup. — savithru / detail
  397. Added missing includes — savithru / detail
  398. removed dot-products supporting (K . nHat) operator in Robin_sansLG BCs, and reverted — allmaras / detail
  399. added IncompressibleNSLib to unit test builders — allmaras / detail
  400. latest sandbox tests for 1D fully developed channel flow — allmaras / detail
  401. Updated global contraints. Solve rotor speed at specified power. — galbramc / detail
  402. Compile fixes — galbramc / detail
  403. Add missing files — galbramc / detail
  404. added optional parameter to output_gnuplot for number of points per element (default remains 11) — allmaras / detail
  405. code cleanup for 1D NS/RANS — allmaras / detail
  406. solution function for 1D RANS: analytic law-of-the-wall for SA — allmaras / detail
  407. missed a pattern file — allmaras / detail
  408. missed a unit test file — allmaras / detail
  409. updated 1D RANS fully developed channel flow case to (a) work, (b) output useful data, — allmaras / detail
  410. Fix all output functionals to properly work in parallel — galbramc / detail
  411. name change for test suite to avoid link conflict for 'make unit' — allmaras / detail
  412. Fix compile error — galbramc / detail
  413. Compile fix — galbramc / detail
  414. Missing include — galbramc / detail
  415. More missing includes — galbramc / detail
  416. More missing includes — galbramc / detail
  417. reverted to depricated include directory for <boost/test/unit_test.hpp> — allmaras / detail
  418. More missing include fixes — galbramc / detail
  419. Upgrade to AFLR 10.8.7 — galbramc / detail
  420. Update AFLR libraries — galbramc / detail
  421. src/ — blsc / detail
  422. Updated BC::isValidState interface so mitState BCs can check if the boundary state generated is also valid — blsc / detail
  423. Removed file that didn't work out and shouldn't have been commited — blsc / detail
  424. Fix AFLR library order — galbramc / detail
  425. Formatting fixes — blsc / detail
  426. Missing instantiation and arguments flipped causing a unit test to fail — blsc / detail
  427. Fixes for AFLR4 and EGADS updates — galbramc / detail
  428. Fix for wake sheets — galbramc / detail
  429. Various small fixes — galbramc / detail
  430. Allow specified interior traces — galbramc / detail
  431. Compile fixes. Allow UnionJack to work in parallel — galbramc / detail
  432. Fix compile error — galbramc / detail
  433. removed 1D incompressible NS channel flow test case -- won't compile due to double — allmaras / detail
  434. Fixes for parallel specified interior traces. Added ParkMMS and EntropyProduction output. — galbramc / detail
  435. Forgot files — galbramc / detail
  436. Fixes for parallel interior traces — galbramc / detail
  437. Fix uninitialized data — galbramc / detail
  438. Fix intel warning — galbramc / detail
  439. Added new SPE10 cases for time-marching FV and DGBR2+AV. — savithru / detail
  440. Fix parallel DG DOF indexing for multiple cell groups — galbramc / detail
  441. fixes for jenkins squawks — allmaras / detail
  442. Fix EG zombies — galbramc / detail
  443. missing #include <vector> — allmaras / detail
  444. fixed warning for un-used typedef — allmaras / detail
  445. added isValidState with (x,time,nx,q) params for Dirichlet — allmaras / detail
  446. Hardening ReadSolution_PX to throw uniformly across MPI if rank 0 fails to load the file. Can now use try catch around restart blocks! — hcarson / detail
  447. fixed uninitialized variables in test — allmaras / detail
  448. removed redundant instantiation — allmaras / detail
  449. removed unneeded print statements and a typo — hcarson / detail
  450. Nightly fixes — galbramc / detail
  451. Various small fixes — galbramc / detail
  452. Fix to erroneous logic — hcarson / detail
  453. Make safe_at work for any container type, and reduce code duplication — hcarson / detail
  454. Nightly fixes — galbramc / detail
  455. More nightly fixes — galbramc / detail
  456. fixed nightly warning on unused variable — allmaras / detail
  457. Relax execution time — galbramc / detail
  458. Changed isValid to check: qbar + qp at cell quads, and qbar, qbar + qpL and qbar + qpR for interior traces. These are the only values used in flux evaluation — hcarson / detail
  459. Fix accross spelling. Fix AFLR3 to distribute in parallel. Update interior trace parallel construction. — galbramc / detail
  460. Reduce maximum grid size for PDESourceOnly_Projection_btest — galbramc / detail
  461. Add latest PETSc version — galbramc / detail
  462. Nightly fix — galbramc / detail
  463. Various CMake fixes — galbramc / detail
  464. Fix for building Tetgen — galbramc / detail
  465. Don't ues intel compiler to compile TetGen — galbramc / detail
  466. Nightly fix — galbramc / detail
  467. Relax tolerance for nightly test — galbramc / detail
  468. Update refine, TetGen, and AFLR. Added ParameterDictList for a list of dictionaries. Rename MeanlineBlade to CamberBlade. — galbramc / detail
  469. Correct AFLR version — galbramc / detail
  470. Forgot tetgen patch — galbramc / detail
  471. Various fixes — galbramc / detail
  472. Fix library order — galbramc / detail
  473. Relax ping tolerance — galbramc / detail
  474. Comment out file dump — galbramc / detail
  475. Nightly fixes — galbramc / detail
  476. Add python UI for body force calculations. — galbramc / detail
  477. Fix compile errors — galbramc / detail
  478. Fix warning — galbramc / detail
  479. Various compile fixes — galbramc / detail
  480. Some small fixes — galbramc / detail
  481. Fix interior trace partitioning — galbramc / detail

#267 (Oct 3, 2020, 9:17:42 AM)

  1. First pass at structuring TCNE pde, a little messy — blsc / detail
  2. TCNE stuff — ksabo / detail
  3. relocate QauxvInterpret forward declaration in prep for 3D stuff — shunz / detail
  4. Added basic stuff for 3D IBL — shunz / detail
  5. Minor cleanup — shunz / detail
  6. Initial pass on PDEIBL3D — shunz / detail
  7. Filled in 3D IBL closure with fully 3D components set to zero — shunz / detail
  8. Added BCNone for IBL3D — shunz / detail
  9. added a working version of sandbox case for IBL3D — shunz / detail
  10. Added a sheet grid of triangles in 3D for IBL3D — shunz / detail
  11. Added instantiation — shunz / detail
  12. Intermediate commit — shunz / detail
  13. Working on integrands for first 3D IBL case — shunz / detail
  14. More fixes to integrand classes for IBL3D — shunz / detail
  15. Fixed instantiations for IBL3D — shunz / detail
  16. Add explicit instantiations and fix typos in closure class — shunz / detail
  17. Initial version of local Cartesian basis construction for 3D IBL — shunz / detail
  18. Minor cleanup — shunz / detail
  19. Fix constuction of q1 and q2 vectors in case of stagnation flows — shunz / detail
  20. Add velocity gradient calculation in cell integrand of 3D IBL — shunz / detail
  21. Refactor and add a 2D stagnation flow test case — shunz / detail
  22. Add a 3D quad grid — shunz / detail
  23. Update cmake list for unit grid test — shunz / detail
  24. Fix typo in 3D quad sheet grid — shunz / detail
  25. fix bug in qauxv gradient calculation in 3D IBL cell integrand — shunz / detail
  26. Fix the scale and dimension of dissipation integral in 3D integral — shunz / detail
  27. fix a typo in thickness identity — shunz / detail
  28. Add more options to 3D IBL stagnation flow case, including quad grid, solution initialization, — shunz / detail
  29. one more bug fix in cell integrand for 3D IBL — shunz / detail
  30. Bugfix in calculation of trace unit normal vector for area cells in 3D — shunz / detail
  31. Add Nishida's crossflow closure.  Add pyrite check of stagnation flow case for 3D IBL.  Minor addition for debugging in PDEIBL3D — shunz / detail
  32. fix dependents of refactoring of GetSolnDofCell_IBL — shunz / detail
  33. Add a 3D flat plate source panel method but haven't tested yet — shunz / detail
  34. intermediate commit: minor clenaup and add guards. — shunz / detail
  35. intermediate commit: working on 3D coupled IBL for torpedo cass — shunz / detail
  36. add 3x3 equation system — shunz / detail
  37. typo fix. add partial instantiations for system 3x3 vector and matrix types — shunz / detail
  38. add linesearch data type for 3x3 equation system — shunz / detail
  39. add missing include — shunz / detail
  40. intermediate commit: fix many compiling errors in the way of running torpedo case for IBL3D. switching computer to continue the work... — shunz / detail
  41. refactor projection to Qauxi — shunz / detail
  42. add interior trace integrand for projection onto Qauxi — shunz / detail
  43. minor fix — shunz / detail
  44. add instantiations for IBL3D torpedo case — shunz / detail
  45. add instantiations for coupled IBL3D — shunz / detail
  46. remove unnecessary assert — shunz / detail
  47. fix for coupled IBL case to compile and run — shunz / detail
  48. fix uninitialized dummy DOFs — shunz / detail
  49. fix setDOFFrom in Qauxv 3D (missing q_y previously) — shunz / detail
  50. Coupled 3D IBL case converged on some simple variants of the torpedo case: linear and mildly nonlinear radial velocity distribution with attached laminar BLs — shunz / detail
  51. Tried triangle grid as well: fine on radially linear velocity distribution but couldn't converge on a more nonlinear case — shunz / detail
  52. cleaned up unused stuff — shunz / detail
  53. refactor SetIBLoutputCellGroup to accommodate both 3D and 2D IBL — shunz / detail
  54. remove outdated include — shunz / detail
  55. more refactoring of SetIBLoutputCellGroup for 3D IBL.  working progress.  switching computer — shunz / detail
  56. intermediate commit. switching computer. — shunz / detail
  57. enable tecplot output for 3D IBL — shunz / detail
  58. added PyDict options for Verbose and writeMarketMatrix for UMFPACK — allmaras / detail
  59. add full-state BC for IBL3D with corresponding boundary trace integrand.  verified on an uncoupled Blasius case — shunz / detail
  60. add a coupled IBL3D Blasius case — shunz / detail
  61. implement PTC for coupled IBL 3x3 system — shunz / detail
  62. add commented-out stuff for turning off laminar amplification and lag equations in IBL3D — shunz / detail
  63. fix typo in commented-out stuff — shunz / detail
  64. enable rotated mesh for IBL3D torpedo case — shunz / detail
  65. set up a torpedo with grid aligned with xy axes.  turned off laminar amplification and lag equations [need to be brought back after testing purely laminar BLs] — shunz / detail
  66. minor change to test case — shunz / detail
  67. minor refactoring on Blasius inflow BC params — shunz / detail
  68. rename test cases — shunz / detail
  69. speed up panel-related jacobian calculation using cached influence matrix in place of surrealized qauxifld — shunz / detail
  70. add jacobian timing for refactoring purpose — shunz / detail
  71. add similar (to DBL3) Falkner-Skan inflow bc for IBL3D with non-constant inflow state. set up a tornado case with rotated xy grid to compare with DBL3 — shunz / detail
  72. minor refactoring of test cases — shunz / detail
  73. remove trivial zero z velocity component to speed up panel method — shunz / detail
  74. minor refactoring — shunz / detail
  75. typo fix — shunz / detail
  76. precompute inviscid velocity for panel, which resulted in O(10) speedup in related residual calculation. fix DOF indexing in residual/jacobian precomputation — shunz / detail
  77. define macro to comment off some lines for timing/refactoring — shunz / detail
  78. minor comments — shunz / detail
  79. add ping test for coupled IBL in 3x3 block system — shunz / detail
  80. attempt to mirror tets in XField3D_Box_Tet_X1_WakeCut — allmaras / detail
  81. reverted to original prism-split coding; remainder of code is hard-coded for the — allmaras / detail
  82. fix typo in Cf2 closure, although it didn't change the torpedo case results much — shunz / detail
  83. Fix dot for VectorBlock — galbramc / detail
  84. added PyDict control of wake & Kutta Nitsche parameters — allmaras / detail
  85. Added test of sourceCoarse and sourceFine for RANSSA with artificial viscosity. — blsc / detail
  86. Added missing sourceCoarse and sourceFine functions from pressure gradient sensor and added unit test — blsc / detail
  87. added PyDict solve check option to UMFPACK; currently commented out actual check — allmaras / detail
  88. Fixes for checking the UMFPACK solve — galbramc / detail
  89. Missed adding PDEEulermitAVDiffusion2D.h to the commit. This file has specialized versions of sourceCoarse and sourceFine for a param that is a H-tensor and distance function. — blsc / detail
  90. add a wall term to dissipation relation of Nishida's closure, although it didn't affect things much — shunz / detail
  91. add a test case of fx67-k-170 airfoil — shunz / detail
  92. minor edit to output filenames at convergence failures — shunz / detail
  93. resolve merge conflict — shunz / detail
  94. changed default flux of IBL to LF flux — shunz / detail
  95. add a test case for drag polar — shunz / detail
  96. ran drag polar cases — shunz / detail
  97. refactored reference speed in transition model — shunz / detail
  98. typo fix — shunz / detail
  99. rename working directory — shunz / detail
  100. refator characteristic speed for PTC — shunz / detail
  101. refator characteristic speed for PTC — shunz / detail
  102. Add unit tests demonstrating that the step matrix calculation is stable to scaling — hcarson / detail
  103. update pyrite files — shunz / detail
  104. refactor 3D IBL closure API to allow for alternative closure models — shunz / detail
  105. save 3D closure relations in a separate header — shunz / detail
  106. add neural net closure for 3D IBL — shunz / detail
  107. run drag polar on finer grids — shunz / detail
  108. switch to run on acdl desktop — shunz / detail
  109. fix memory leak warning caused by accessing index -1 — shunz / detail
  110. minor update — shunz / detail
  111. mucking with PETSc for IBL3 — shunz / detail
  112. instantiate MKL_PARDISO solver for matrix block 3x3 — shunz / detail
  113. tried MKL_PARDISO solver for IBL3 — shunz / detail
  114. Adding test that Explicitly calculating the step from the metric directly is not unstable. Cases in 2D and 3D, showing stability to an AR of 2^10 in 3D, and 2^64 in 2D. — hcarson / detail
  115. minor typo fix — shunz / detail
  116. fix formatting — shunz / detail
  117. add mitLG BC for IBL3 — shunz / detail
  118. minor refactoring — shunz / detail
  119. switch to the same input parameters as DBL3 — shunz / detail
  120. add LF flux to IBL3 — shunz / detail
  121. Changes to ErrorModel to allow for the new exact nodal metric calculation — hcarson / detail
  122. Changes to ErrorModel to allow for the new exact nodal metric calculation — hcarson / detail
  123. pre merge add.... wth? — hcarson / detail
  124. add Dirichlet mitLG inflow BC to a Blasius flow test case — shunz / detail
  125. Jenkins fix — hcarson / detail
  126. reverting to the develop branch of ErrorModel — hcarson / detail
  127. fixes to case — hcarson / detail
  128. fixes to case — hcarson / detail
  129. intermediate commit: added 4-equation neural net closure model.  working on 4-equation IBL3D pde class — shunz / detail
  130. remove extraneous tamplate keyword — shunz / detail
  131. Various changes for arthur: Commented the adjoint_wo_p things from SolverInterface_VMSD_BR2, reducing the memory reqs. Made the Deltawing adapts more uniform and fit with the plan. Added the Solve case for the VMSD delta wing. — hcarson / detail
  132. added soruce terms for the lateral curvature equation of IBL3 — shunz / detail
  133. removed re-definition — shunz / detail
  134. refactored and added PDE and BC for four-equation 3D IBL class.  added a starting point for torpedo case — shunz / detail
  135. separated classes of 3D IBL and IBLFourEqn — shunz / detail
  136. generalized templates in IBL3-related integrands — shunz / detail
  137. added instantiations for four-equation 3D IBL — shunz / detail
  138. fixed instantiation typo — shunz / detail
  139. turned on verbose linesearch printout — shunz / detail
  140. added a visous-only Blasius case for 4-equation 3D IBL.  added a missing include — shunz / detail
  141. refactored reference coordinate gradient for speedup.  add/edit comments for clarity — shunz / detail
  142. typo fix: gradqe*E_qesq.  minor edits — shunz / detail
  143. turned off printout in unit testing — shunz / detail
  144. cosmetic changes — shunz / detail
  145. refactored neural net closure models: H22, Hd1, Hc2 — shunz / detail
  146. added output for four-equation 3D IBL — shunz / detail
  147. unit tests and associated modifications — ksabo / detail
  148. fixed auxi equation (wall transpiration): previous mass flux missed crossflow component — shunz / detail
  149. previous fix to wall transpiration (auxi equation) didn't fix.  it is now fixed.  added unit test — shunz / detail
  150. minor tweak — shunz / detail
  151. minor cleanup — shunz / detail
  152. add velocity gradient output to IBL — shunz / detail
  153. add instantiation — shunz / detail
  154. added IBL3 closure relations in the form of analytic formulae — shunz / detail
  155. tested something with git (still learning this thing) — ksabo / detail
  156. salt deposit #1 (updated files I accidentally erased...) — ksabo / detail
  157. refactored neural net closure implementation — shunz / detail
  158. recoded jacobianMasterState method, still need to test it — ksabo / detail
  159. added a set of IBL3 closure models based on analytic formulae — shunz / detail
  160. restored four-equation neural net closure to its original working state — shunz / detail
  161. switch to using 4-equation IBL3 closure based on analytic formulae.  results are similar or slightly better than neural net closure — shunz / detail
  162. fixed a typo (which fortunately wasn't used yet).  added exception throws — shunz / detail
  163. fixed include filename — shunz / detail
  164. removed redundant exceptions — shunz / detail
  165. Q1DConservative for TCNE is functionally completed (only needs aesthetic changes at this point) — ksabo / detail
  166. refactored four-eqn IBL3 curve-fit closure — shunz / detail
  167. conformed to vera check: should not use "using namespace" in header files — shunz / detail
  168. fixed unit tests for after API refactoring — shunz / detail
  169. fixed unit tests for the  previous API refactoring — shunz / detail
  170. fixed ping tests: finite difference step size — shunz / detail
  171. added ping test for four-eqn IBL3 — shunz / detail
  172. added Blasius flow test case for four-eqn IBL3D. some cleanup — shunz / detail
  173. added include — shunz / detail
  174. added includes — shunz / detail
  175. checked four-eqn IBL3D on Blasius case and stagnation radial flow — shunz / detail
  176. added a stagnation flow toy case.  mucked with IBL3 for torpedo case — shunz / detail
  177. fixed toy case to keep up with API refactoring — shunz / detail
  178. added missing include related to MPI — shunz / detail
  179. suppresed file dump in system test — shunz / detail
  180. added assertions — shunz / detail
  181. add some derivates to the IBL3 output — shunz / detail
  182. relaxed pyrite tolerance — shunz / detail
  183. relaxed pyrite tolerance for intel compiler.  speed up ping test to avoid time-out — shunz / detail
  184. renamed output — shunz / detail
  185. added and refactored IBL3 output — shunz / detail
  186. make verbose_ if-tests consistent throughout — allmaras / detail
  187. fixed screen dump for checkSolve_ when residuals above tolerance — allmaras / detail
  188. added option to dump solution at each Newton iteration — allmaras / detail
  189. added pressure gradient for space-time — allmaras / detail
  190. added instantiations, etc, needed for log(p) variables with look-up porosity/permeability tables — allmaras / detail
  191. added grid-Laplacian artificial viscosity for pressure; currently hard-coded diffusion coefficient — allmaras / detail
  192. trying to fix gnu9 compiler warning — shunz / detail
  193. added "#include <utilities>" for std::move; added unit test for VectorBlock_3 — allmaras / detail
  194. fixed vera line-length squawk — allmaras / detail
  195. fixed vera line-length squawk — allmaras / detail
  196. fixed vera line-length squawk — allmaras / detail
  197. add a new curve fit model based on low-dissipative DBL3 data — shunz / detail
  198. allow for uncoupled/viscou-only IBL3 solution by tweaking the panel method — shunz / detail
  199. fixed VectorBlock_3 unit test; made ::m() and ::n() static, so 2, 3, and 4 are all consistent — allmaras / detail
  200. forgot to save changes in the last commit... — shunz / detail
  201. relaxed Jenkins timeout threshold for some large ping tests — shunz / detail
  202. minor tweak — shunz / detail
  203. speed up ping test by turning off some redundant sub-block checks — shunz / detail
  204. fix cppcheck error — shunz / detail
  205. speed up ping test by turning off tests on some sub-blocks of the jacobian — shunz / detail
  206. added directory creation for output files — allmaras / detail
  207. Don't use python2 with jenkins — galbramc / detail
  208. removed old version of adjoint-compatible potential solver for Hershey wing — allmaras / detail
  209. temporarily disabled tests involving artificial viscosity fluxes if USE_PRESSURE_AV defined — allmaras / detail
  210. make VectorBlock test-suite names unique (so make unit_build works) — allmaras / detail
  211. added unit tests for circulation integrations — allmaras / detail
  212. added circulation integrations for lift & roll as functional outputs — allmaras / detail
  213. Add Q3 and Q4 elements to Gmsh IO — galbramc / detail
  214. clean-up of circulation-base functional code/test; added drag but #ifdef'ed out, as it's not complete — allmaras / detail
  215. intermediate commit: working on hooking up PETSc for block algebraic equation system — shunz / detail
  216. Fix finding macOS Accelerate BLAS — galbramc / detail
  217. cppcheck fixes for nightly — allmaras / detail
  218. moving back to develop — hcarson / detail
  219. add empty definition to fix undefined reference in weekly test — shunz / detail
  220. add empty definition to fix undefined reference in weekly test — shunz / detail
  221. add empty definition to fix undefined reference in weekly test — shunz / detail
  222. vera fix — hcarson / detail
  223. added a new set of closure relations based on low-dissipation DBL3 data — shunz / detail
  224. updated RthCf1 correlation coefficient — shunz / detail
  225. fixed call to undefined function — shunz / detail
  226. removing unneeded test — hcarson / detail
  227. minor updates to TCNE stuff (getting back into it) — ksabo / detail
  228. added mitLG BC for four equation IBL3D — shunz / detail
  229. fixing unused var — hcarson / detail
  230. Update for latest version of refine — galbramc / detail
  231. missing space — hcarson / detail
  232. Added vpr11@mit.edu to DeveloperEmailAddresses — vpr11 / detail
  233. End of week dump. — ksabo / detail
  234. added pressure jump into source for AV sensor in two-phase porous media — allmaras / detail
  235. minor changes to SPE10 test case: added #ifdef's for log(pn), table lookup; changed — allmaras / detail
  236. added #define label for pressure jump in AV sensor source; updated unit test — allmaras / detail
  237. added new closure option (but commented off for now). updated system test case for four-eqn IBL3D on stagnation flow BL — shunz / detail
  238. zero guard for smoothabs0 — allmaras / detail
  239. updated unit tests to incorporate pressure jumps in sensor source for two-phase AV — allmaras / detail
  240. Use 2 MPI processors on macOS with Jenkins. Make TetGen optional again. — galbramc / detail
  241. Fix for finding boost — galbramc / detail
  242. Some chemsitry model unit tests - need before source term testing. — ksabo / detail
  243. Fix for 2 MPI procs on macOS — galbramc / detail
  244. Various CMake fixes — galbramc / detail
  245. Fix BuildBoost — galbramc / detail
  246. vibrational relaxation time unit tests — ksabo / detail
  247. LIP solver can consume CAPS mesh — galbramc / detail
  248. Update minimum ESP version to 1.18 — galbramc / detail
  249. Relax EGADS version requirement — galbramc / detail
  250. Fix link error — galbramc / detail
  251. Missed a file — galbramc / detail
  252. More link error fixes — galbramc / detail
  253. More link fixes — galbramc / detail
  254. Exlicit Exception instantiations. Bias for Python 3 with CMake — galbramc / detail
  255. added continuousGlobalMap() for block 2x2 AES — shunz / detail
  256. PETSc now works for coupled IBL3 block AES 3x3 — shunz / detail
  257. minor refactoring — shunz / detail
  258. cleaned up and merged sandbox cases — shunz / detail
  259. use reference velocity scale consistently — shunz / detail
  260. turned on quasi-2D closure relations for 3-eq 3D IBL — shunz / detail
  261. Missed one instantiation. More optional TetGen fixes — galbramc / detail
  262. Various small fixes — galbramc / detail
  263. added exceptions for petsc MPI implementations for block AES 3x3 — shunz / detail
  264. turned off 3D IBL transition and lag equations for system test (for now) — shunz / detail
  265. turned off some TBD MPI stuff in petsc block AES 3x3 to avoid compiling errors — shunz / detail
  266. fixed unused variable warnings — shunz / detail
  267. fix compiling error in sandbox case — shunz / detail
  268. Added quasi-2D turbulent closure to four-eqn IBL3 formulation — shunz / detail
  269. fixed deprecated macro — shunz / detail
  270. First set of updates from cleaning up develop branch. Contains code and tests related to adding a spatially varying a-field (i.e. from previous adapt soln) in Homotopy — blsc / detail
  271. Removed sourceCoarse and sourceFine in lieu of sourceTraceJump — galbramc / detail
  272. Move Surreal into SANS namespace — galbramc / detail
  273. Forgot a file — galbramc / detail
  274. Missed MPI SurrealS — galbramc / detail
  275. Add missing include — galbramc / detail
  276. Remove SurrealS(Real,Real) constructor — galbramc / detail
  277. More fixes for modified Surreal — galbramc / detail
  278. Fix warnings — galbramc / detail
  279. Setup to run VMSDBR2 on fixed Joukowski meshes — galbramc / detail
  280. Fix uninitialized variable warnings — galbramc / detail
  281. Fix vera warning — galbramc / detail
  282. src/LinearAlgebra/ — blsc / detail
  283. First pass at prototyping a globally constrained algebraic equation set — blsc / detail
  284. Updates to globally constrained equations to include condensation of matrix in PETSc — blsc / detail
  285. Updates for first round of parallelizing the homotopy — blsc / detail
  286. Parallel homotopy appears to be working — blsc / detail
  287. EGADS interface refactoring. Added meanline blade. — galbramc / detail
  288. Fixes for EGTess — galbramc / detail
  289. More fixes to the EGADS cleanup — galbramc / detail
  290. More EGADS fixes — galbramc / detail
  291. Fix compile error — galbramc / detail
  292. Fix warning — galbramc / detail
  293. Fix more warnings — galbramc / detail
  294. A few tweeks on the homotopy and 3D set up — blsc / detail
  295. Updated interface for globally constrained equations so the jacobian for the pde and the constraints are in seperate functions — blsc / detail
  296. The small problem for static condensation is calculated on one processor then broadcast, that way there are on finite precision inconsistencies — blsc / detail
  297. Added template parameter to determine if (PETSc) should do a shur complement from block 2x2. Note, if we're not using PETSc, then the block matrix is solved as is. This is because the shur complement is only a work around for parallel communication issues. — blsc / detail
  298. ... because if you hard code tecplot for 4 levels of grid refinement on output you get a 300Gb tecplot file in 3D ... — blsc / detail
  299. Refactor CubicCamber. Add Normal vector field. — galbramc / detail
  300. Forgot files — galbramc / detail
  301. Add missing includes — galbramc / detail
  302. Number of global constraints is now a runtime option. The global coupling uses a CRS matrix structure, as opposed to MatrixD, since the CRS structure is already there. — blsc / detail
  303. Fixed bug with small system decomposition. The matrix was incorrectly sized for runtime constraints — blsc / detail
  304. Fix field normal vector check for parallel — galbramc / detail
  305. Resolved issues that came up due to merging — blsc / detail
  306. First pass at prototyping a globally constrained algebraic equation set — blsc / detail
  307. Updates to globally constrained equations to include condensation of matrix in PETSc — blsc / detail
  308. Updates for first round of parallelizing the homotopy — blsc / detail
  309. Parallel homotopy appears to be working — blsc / detail
  310. A few tweeks on the homotopy and 3D set up — blsc / detail
  311. Updated interface for globally constrained equations so the jacobian for the pde and the constraints are in seperate functions — blsc / detail
  312. The small problem for static condensation is calculated on one processor then broadcast, that way there are on finite precision inconsistencies — blsc / detail
  313. Added template parameter to determine if (PETSc) should do a shur complement from block 2x2. Note, if we're not using PETSc, then the block matrix is solved as is. This is because the shur complement is only a work around for parallel communication issues. — blsc / detail
  314. ... because if you hard code tecplot for 4 levels of grid refinement on output you get a 300Gb tecplot file in 3D ... — blsc / detail
  315. Number of global constraints is now a runtime option. The global coupling uses a CRS matrix structure, as opposed to MatrixD, since the CRS structure is already there. — blsc / detail
  316. Fixed bug with small system decomposition. The matrix was incorrectly sized for runtime constraints — blsc / detail
  317. Clean up after merging from develop — blsc / detail
  318. More merging issues — blsc / detail
  319. Added RotorSource for Euler equations — galbramc / detail
  320. Various small fixes — galbramc / detail
  321. Fix compile error — galbramc / detail
  322. A few more fixes — galbramc / detail
  323. Fix unit test error — galbramc / detail
  324. Bulk of unit tests done. — ksabo / detail
  325. Update refine libraries — galbramc / detail
  326. src/ — blsc / detail
  327. Missing unit tests and ability to daisy chain globally constrained algebraic equation sets — blsc / detail
  328. Missed an update for the serial version of PETSc — blsc / detail
  329. Further speed improvements — galbramc / detail
  330. Fix VMSDBR2 adjoint bug. Update refine build. — galbramc / detail
  331. Some fixes for the Rotor source — galbramc / detail
  332. Trying DG Normal vector field — galbramc / detail
  333. Correction to Rotor source — galbramc / detail
  334. One more fix to Rotor source — galbramc / detail
  335. One more fix — galbramc / detail
  336. updated file names — ksabo / detail
  337. updated file names (round 2) — ksabo / detail
  338. Fixed warnings and other minor things — ksabo / detail
  339. 150 char line error fix — ksabo / detail
  340. used brackets for matrix call, fixed now — ksabo / detail
  341. Some cleanup of PETSc Shur solve — galbramc / detail
  342. Fixes for MKL with Block 2x2 — galbramc / detail
  343. Bug fixes for homotopy and some 3D bugs — blsc / detail
  344. Fixed a few bug (undefined param and timeout) — blsc / detail
  345. fixed stack-buffer-overflow error in temperature data structures — ksabo / detail
  346. Missing instantiations, BC that only existed for local testing purposes removed. — blsc / detail
  347. fixed read access error from electron indexing bug — ksabo / detail
  348. fixed compiler warnings — ksabo / detail
  349. dropped tol to 1e-11 from 1e-12, removed extra {} that may have been causing an issue — ksabo / detail
  350. renamed test suite (explicitly added TCNE to name) - was causing conflict error — ksabo / detail
  351. SANS_Nightly fix, efma line compiler warning deleted — ksabo / detail
  352. updated reverse reaction rate temperature calculations — ksabo / detail
  353. Add trace quadrature checking to isValidCell_VMSD. — hcarson / detail
  354. Refactored global constraintes — galbramc / detail
  355. Forgot files — galbramc / detail
  356. Compile fixes — galbramc / detail
  357. Fix unit test — galbramc / detail
  358. Added a new ParamFieldBuilder specialization for (log-permeability, porosity, gen-H) param fields. Added a unit test. — savithru / detail
  359. added pde/IncompressibleNS — allmaras / detail
  360. added 1D incompressible NS for fully developed channel flow with sansLG Robin BCs — allmaras / detail
  361. added 2nd weighting parameter to weightBC; 1st parameter is for Dirichlet / adjoint state, — allmaras / detail
  362. added 2nd weighting parameter to weightBC; missed one file — allmaras / detail
  363. added Robin_sansLG BC catagory — allmaras / detail
  364. IO file check flag -> true — allmaras / detail
  365. 1D incompressible NS solver for fully developed channel flow — allmaras / detail
  366. bug fixes — allmaras / detail
  367. Major refactor of the two-phase PDE classes to support a (log-permeability, porosity) param-field. The artificial viscosity classes use a (log-permeability, porosity, log-H) param-field. — savithru / detail
  368. Updated ErrorEstimate_DGBR2 instantiations — savithru / detail
  369. Updated tests. All unit and system tests compile now. — savithru / detail
  370. added test for -Identity() initializer — allmaras / detail
  371. Fix so -DLA::Identity() works properly — galbramc / detail
  372. added BCs for 1D RANS-SA for channel flow — allmaras / detail
  373. unit tests for 1D RANS-SA for channel flow — allmaras / detail
  374. unit tests: missed one — allmaras / detail
  375. unit test output pattern test files — allmaras / detail
  376. 1D RANS-SA test case for fully developed channel flow -- preliminary — allmaras / detail
  377. updated test case — allmaras / detail
  378. More refactoring to get sandbox cases to compile. — savithru / detail
  379. Fixed a unit test. — savithru / detail
  380. Missed a sandbox case. — savithru / detail
  381. Reverting include path for boost output_test_stream — savithru / detail
  382. made algebraic eqn-set files more consistent between Galerkin and Galerkin_Stabilized — allmaras / detail
  383. instantiated VectorS<2> output — allmaras / detail
  384. Updated discretizations and PDE interfaces to use both paramL and paramR when evaluating fluxAdvectiveUpwind or fluxAdvectiveUpwindSpaceTime. This is important for the two-phase flow PDE, where the temporal flux depends on the porosity param-field value (which can be heterogeneous). — savithru / detail
  385. Update 2D ugrid reader for UNFORATTED (.r8.ugrid) files. — galbramc / detail
  386. Fix warning — galbramc / detail
  387. Fix warning — galbramc / detail
  388. added Robin BC dot product tests; currently commented out, since they fail to compile — allmaras / detail
  389. added Tensor-Vector dot-products: e.g. dot( VectorX, TensorMatrixQ ) — allmaras / detail
  390. clean up: MatrixS<D,D,MatrixQ> -> TensorMatrixQ — allmaras / detail
  391. needed additional #include's — allmaras / detail
  392. added ND ctor for BCs: BC( PDE, BCArgs ) — allmaras / detail
  393. added dist parameters to certain functions; added jacobianMasterState; code clean-up — allmaras / detail
  394. added skin friction / drag output for 1D incompressible NS channel flow — allmaras / detail
  395. added #if's to try different combinations of '(gradphi . K . nHat) betaBC^t rsdBC'; — allmaras / detail
  396. Updated FV-TPFA discretization to work for heterogeneous properties + some cleanup. — savithru / detail
  397. Added missing includes — savithru / detail
  398. removed dot-products supporting (K . nHat) operator in Robin_sansLG BCs, and reverted — allmaras / detail
  399. added IncompressibleNSLib to unit test builders — allmaras / detail
  400. latest sandbox tests for 1D fully developed channel flow — allmaras / detail
  401. Updated global contraints. Solve rotor speed at specified power. — galbramc / detail
  402. Compile fixes — galbramc / detail
  403. Add missing files — galbramc / detail
  404. added optional parameter to output_gnuplot for number of points per element (default remains 11) — allmaras / detail
  405. code cleanup for 1D NS/RANS — allmaras / detail
  406. solution function for 1D RANS: analytic law-of-the-wall for SA — allmaras / detail
  407. missed a pattern file — allmaras / detail
  408. missed a unit test file — allmaras / detail
  409. updated 1D RANS fully developed channel flow case to (a) work, (b) output useful data, — allmaras / detail
  410. Fix all output functionals to properly work in parallel — galbramc / detail
  411. name change for test suite to avoid link conflict for 'make unit' — allmaras / detail
  412. Fix compile error — galbramc / detail
  413. Compile fix — galbramc / detail
  414. Missing include — galbramc / detail
  415. More missing includes — galbramc / detail
  416. More missing includes — galbramc / detail
  417. reverted to depricated include directory for <boost/test/unit_test.hpp> — allmaras / detail
  418. More missing include fixes — galbramc / detail
  419. Upgrade to AFLR 10.8.7 — galbramc / detail
  420. Update AFLR libraries — galbramc / detail
  421. src/ — blsc / detail
  422. Updated BC::isValidState interface so mitState BCs can check if the boundary state generated is also valid — blsc / detail
  423. Removed file that didn't work out and shouldn't have been commited — blsc / detail
  424. Fix AFLR library order — galbramc / detail
  425. Formatting fixes — blsc / detail
  426. Missing instantiation and arguments flipped causing a unit test to fail — blsc / detail
  427. Fixes for AFLR4 and EGADS updates — galbramc / detail
  428. Fix for wake sheets — galbramc / detail
  429. Various small fixes — galbramc / detail
  430. Allow specified interior traces — galbramc / detail
  431. Compile fixes. Allow UnionJack to work in parallel — galbramc / detail
  432. Fix compile error — galbramc / detail
  433. removed 1D incompressible NS channel flow test case -- won't compile due to double — allmaras / detail
  434. Fixes for parallel specified interior traces. Added ParkMMS and EntropyProduction output. — galbramc / detail
  435. Forgot files — galbramc / detail
  436. Fixes for parallel interior traces — galbramc / detail
  437. Fix uninitialized data — galbramc / detail
  438. Fix intel warning — galbramc / detail
  439. Added new SPE10 cases for time-marching FV and DGBR2+AV. — savithru / detail
  440. Fix parallel DG DOF indexing for multiple cell groups — galbramc / detail
  441. fixes for jenkins squawks — allmaras / detail
  442. Fix EG zombies — galbramc / detail
  443. missing #include <vector> — allmaras / detail
  444. fixed warning for un-used typedef — allmaras / detail
  445. added isValidState with (x,time,nx,q) params for Dirichlet — allmaras / detail
  446. Hardening ReadSolution_PX to throw uniformly across MPI if rank 0 fails to load the file. Can now use try catch around restart blocks! — hcarson / detail
  447. fixed uninitialized variables in test — allmaras / detail
  448. removed redundant instantiation — allmaras / detail
  449. removed unneeded print statements and a typo — hcarson / detail
  450. Nightly fixes — galbramc / detail
  451. Various small fixes — galbramc / detail
  452. Fix to erroneous logic — hcarson / detail
  453. Make safe_at work for any container type, and reduce code duplication — hcarson / detail
  454. Nightly fixes — galbramc / detail
  455. More nightly fixes — galbramc / detail
  456. fixed nightly warning on unused variable — allmaras / detail
  457. Relax execution time — galbramc / detail
  458. Changed isValid to check: qbar + qp at cell quads, and qbar, qbar + qpL and qbar + qpR for interior traces. These are the only values used in flux evaluation — hcarson / detail
  459. Fix accross spelling. Fix AFLR3 to distribute in parallel. Update interior trace parallel construction. — galbramc / detail
  460. Reduce maximum grid size for PDESourceOnly_Projection_btest — galbramc / detail
  461. Add latest PETSc version — galbramc / detail
  462. Nightly fix — galbramc / detail
  463. Various CMake fixes — galbramc / detail
  464. Fix for building Tetgen — galbramc / detail
  465. Don't ues intel compiler to compile TetGen — galbramc / detail
  466. Nightly fix — galbramc / detail
  467. Relax tolerance for nightly test — galbramc / detail
  468. Update refine, TetGen, and AFLR. Added ParameterDictList for a list of dictionaries. Rename MeanlineBlade to CamberBlade. — galbramc / detail
  469. Correct AFLR version — galbramc / detail
  470. Forgot tetgen patch — galbramc / detail
  471. Various fixes — galbramc / detail
  472. Fix library order — galbramc / detail
  473. Relax ping tolerance — galbramc / detail
  474. Comment out file dump — galbramc / detail
  475. Nightly fixes — galbramc / detail

#266 (Sep 26, 2020, 1:52:07 AM)

  1. First pass at structuring TCNE pde, a little messy — blsc / detail
  2. TCNE stuff — ksabo / detail
  3. relocate QauxvInterpret forward declaration in prep for 3D stuff — shunz / detail
  4. Added basic stuff for 3D IBL — shunz / detail
  5. Minor cleanup — shunz / detail
  6. Initial pass on PDEIBL3D — shunz / detail
  7. Filled in 3D IBL closure with fully 3D components set to zero — shunz / detail
  8. Added BCNone for IBL3D — shunz / detail
  9. added a working version of sandbox case for IBL3D — shunz / detail
  10. Added a sheet grid of triangles in 3D for IBL3D — shunz / detail
  11. Added instantiation — shunz / detail
  12. Intermediate commit — shunz / detail
  13. Working on integrands for first 3D IBL case — shunz / detail
  14. More fixes to integrand classes for IBL3D — shunz / detail
  15. Fixed instantiations for IBL3D — shunz / detail
  16. Add explicit instantiations and fix typos in closure class — shunz / detail
  17. Initial version of local Cartesian basis construction for 3D IBL — shunz / detail
  18. Minor cleanup — shunz / detail
  19. Fix constuction of q1 and q2 vectors in case of stagnation flows — shunz / detail
  20. Add velocity gradient calculation in cell integrand of 3D IBL — shunz / detail
  21. Refactor and add a 2D stagnation flow test case — shunz / detail
  22. Add a 3D quad grid — shunz / detail
  23. Update cmake list for unit grid test — shunz / detail
  24. Fix typo in 3D quad sheet grid — shunz / detail
  25. fix bug in qauxv gradient calculation in 3D IBL cell integrand — shunz / detail
  26. Fix the scale and dimension of dissipation integral in 3D integral — shunz / detail
  27. fix a typo in thickness identity — shunz / detail
  28. Add more options to 3D IBL stagnation flow case, including quad grid, solution initialization, — shunz / detail
  29. one more bug fix in cell integrand for 3D IBL — shunz / detail
  30. Bugfix in calculation of trace unit normal vector for area cells in 3D — shunz / detail
  31. Add Nishida's crossflow closure.  Add pyrite check of stagnation flow case for 3D IBL.  Minor addition for debugging in PDEIBL3D — shunz / detail
  32. fix dependents of refactoring of GetSolnDofCell_IBL — shunz / detail
  33. Add a 3D flat plate source panel method but haven't tested yet — shunz / detail
  34. intermediate commit: minor clenaup and add guards. — shunz / detail
  35. intermediate commit: working on 3D coupled IBL for torpedo cass — shunz / detail
  36. add 3x3 equation system — shunz / detail
  37. typo fix. add partial instantiations for system 3x3 vector and matrix types — shunz / detail
  38. add linesearch data type for 3x3 equation system — shunz / detail
  39. add missing include — shunz / detail
  40. intermediate commit: fix many compiling errors in the way of running torpedo case for IBL3D. switching computer to continue the work... — shunz / detail
  41. refactor projection to Qauxi — shunz / detail
  42. add interior trace integrand for projection onto Qauxi — shunz / detail
  43. minor fix — shunz / detail
  44. add instantiations for IBL3D torpedo case — shunz / detail
  45. add instantiations for coupled IBL3D — shunz / detail
  46. remove unnecessary assert — shunz / detail
  47. fix for coupled IBL case to compile and run — shunz / detail
  48. fix uninitialized dummy DOFs — shunz / detail
  49. fix setDOFFrom in Qauxv 3D (missing q_y previously) — shunz / detail
  50. Coupled 3D IBL case converged on some simple variants of the torpedo case: linear and mildly nonlinear radial velocity distribution with attached laminar BLs — shunz / detail
  51. Tried triangle grid as well: fine on radially linear velocity distribution but couldn't converge on a more nonlinear case — shunz / detail
  52. cleaned up unused stuff — shunz / detail
  53. refactor SetIBLoutputCellGroup to accommodate both 3D and 2D IBL — shunz / detail
  54. remove outdated include — shunz / detail
  55. more refactoring of SetIBLoutputCellGroup for 3D IBL.  working progress.  switching computer — shunz / detail
  56. intermediate commit. switching computer. — shunz / detail
  57. enable tecplot output for 3D IBL — shunz / detail
  58. added PyDict options for Verbose and writeMarketMatrix for UMFPACK — allmaras / detail
  59. add full-state BC for IBL3D with corresponding boundary trace integrand.  verified on an uncoupled Blasius case — shunz / detail
  60. add a coupled IBL3D Blasius case — shunz / detail
  61. implement PTC for coupled IBL 3x3 system — shunz / detail
  62. add commented-out stuff for turning off laminar amplification and lag equations in IBL3D — shunz / detail
  63. fix typo in commented-out stuff — shunz / detail
  64. enable rotated mesh for IBL3D torpedo case — shunz / detail
  65. set up a torpedo with grid aligned with xy axes.  turned off laminar amplification and lag equations [need to be brought back after testing purely laminar BLs] — shunz / detail
  66. minor change to test case — shunz / detail
  67. minor refactoring on Blasius inflow BC params — shunz / detail
  68. rename test cases — shunz / detail
  69. speed up panel-related jacobian calculation using cached influence matrix in place of surrealized qauxifld — shunz / detail
  70. add jacobian timing for refactoring purpose — shunz / detail
  71. add similar (to DBL3) Falkner-Skan inflow bc for IBL3D with non-constant inflow state. set up a tornado case with rotated xy grid to compare with DBL3 — shunz / detail
  72. minor refactoring of test cases — shunz / detail
  73. remove trivial zero z velocity component to speed up panel method — shunz / detail
  74. minor refactoring — shunz / detail
  75. typo fix — shunz / detail
  76. precompute inviscid velocity for panel, which resulted in O(10) speedup in related residual calculation. fix DOF indexing in residual/jacobian precomputation — shunz / detail
  77. define macro to comment off some lines for timing/refactoring — shunz / detail
  78. minor comments — shunz / detail
  79. add ping test for coupled IBL in 3x3 block system — shunz / detail
  80. attempt to mirror tets in XField3D_Box_Tet_X1_WakeCut — allmaras / detail
  81. reverted to original prism-split coding; remainder of code is hard-coded for the — allmaras / detail
  82. fix typo in Cf2 closure, although it didn't change the torpedo case results much — shunz / detail
  83. Fix dot for VectorBlock — galbramc / detail
  84. added PyDict control of wake & Kutta Nitsche parameters — allmaras / detail
  85. Added test of sourceCoarse and sourceFine for RANSSA with artificial viscosity. — blsc / detail
  86. Added missing sourceCoarse and sourceFine functions from pressure gradient sensor and added unit test — blsc / detail
  87. added PyDict solve check option to UMFPACK; currently commented out actual check — allmaras / detail
  88. Fixes for checking the UMFPACK solve — galbramc / detail
  89. Missed adding PDEEulermitAVDiffusion2D.h to the commit. This file has specialized versions of sourceCoarse and sourceFine for a param that is a H-tensor and distance function. — blsc / detail
  90. add a wall term to dissipation relation of Nishida's closure, although it didn't affect things much — shunz / detail
  91. add a test case of fx67-k-170 airfoil — shunz / detail
  92. minor edit to output filenames at convergence failures — shunz / detail
  93. resolve merge conflict — shunz / detail
  94. changed default flux of IBL to LF flux — shunz / detail
  95. add a test case for drag polar — shunz / detail
  96. ran drag polar cases — shunz / detail
  97. refactored reference speed in transition model — shunz / detail
  98. typo fix — shunz / detail
  99. rename working directory — shunz / detail
  100. refator characteristic speed for PTC — shunz / detail
  101. refator characteristic speed for PTC — shunz / detail
  102. Add unit tests demonstrating that the step matrix calculation is stable to scaling — hcarson / detail
  103. update pyrite files — shunz / detail
  104. refactor 3D IBL closure API to allow for alternative closure models — shunz / detail
  105. save 3D closure relations in a separate header — shunz / detail
  106. add neural net closure for 3D IBL — shunz / detail
  107. run drag polar on finer grids — shunz / detail
  108. switch to run on acdl desktop — shunz / detail
  109. fix memory leak warning caused by accessing index -1 — shunz / detail
  110. minor update — shunz / detail
  111. mucking with PETSc for IBL3 — shunz / detail
  112. instantiate MKL_PARDISO solver for matrix block 3x3 — shunz / detail
  113. tried MKL_PARDISO solver for IBL3 — shunz / detail
  114. Adding test that Explicitly calculating the step from the metric directly is not unstable. Cases in 2D and 3D, showing stability to an AR of 2^10 in 3D, and 2^64 in 2D. — hcarson / detail
  115. minor typo fix — shunz / detail
  116. fix formatting — shunz / detail
  117. add mitLG BC for IBL3 — shunz / detail
  118. minor refactoring — shunz / detail
  119. switch to the same input parameters as DBL3 — shunz / detail
  120. add LF flux to IBL3 — shunz / detail
  121. Changes to ErrorModel to allow for the new exact nodal metric calculation — hcarson / detail
  122. Changes to ErrorModel to allow for the new exact nodal metric calculation — hcarson / detail
  123. pre merge add.... wth? — hcarson / detail
  124. add Dirichlet mitLG inflow BC to a Blasius flow test case — shunz / detail
  125. Jenkins fix — hcarson / detail
  126. reverting to the develop branch of ErrorModel — hcarson / detail
  127. fixes to case — hcarson / detail
  128. fixes to case — hcarson / detail
  129. intermediate commit: added 4-equation neural net closure model.  working on 4-equation IBL3D pde class — shunz / detail
  130. remove extraneous tamplate keyword — shunz / detail
  131. Various changes for arthur: Commented the adjoint_wo_p things from SolverInterface_VMSD_BR2, reducing the memory reqs. Made the Deltawing adapts more uniform and fit with the plan. Added the Solve case for the VMSD delta wing. — hcarson / detail
  132. added soruce terms for the lateral curvature equation of IBL3 — shunz / detail
  133. removed re-definition — shunz / detail
  134. refactored and added PDE and BC for four-equation 3D IBL class.  added a starting point for torpedo case — shunz / detail
  135. separated classes of 3D IBL and IBLFourEqn — shunz / detail
  136. generalized templates in IBL3-related integrands — shunz / detail
  137. added instantiations for four-equation 3D IBL — shunz / detail
  138. fixed instantiation typo — shunz / detail
  139. turned on verbose linesearch printout — shunz / detail
  140. added a visous-only Blasius case for 4-equation 3D IBL.  added a missing include — shunz / detail
  141. refactored reference coordinate gradient for speedup.  add/edit comments for clarity — shunz / detail
  142. typo fix: gradqe*E_qesq.  minor edits — shunz / detail
  143. turned off printout in unit testing — shunz / detail
  144. cosmetic changes — shunz / detail
  145. refactored neural net closure models: H22, Hd1, Hc2 — shunz / detail
  146. added output for four-equation 3D IBL — shunz / detail
  147. unit tests and associated modifications — ksabo / detail
  148. fixed auxi equation (wall transpiration): previous mass flux missed crossflow component — shunz / detail
  149. previous fix to wall transpiration (auxi equation) didn't fix.  it is now fixed.  added unit test — shunz / detail
  150. minor tweak — shunz / detail
  151. minor cleanup — shunz / detail
  152. add velocity gradient output to IBL — shunz / detail
  153. add instantiation — shunz / detail
  154. added IBL3 closure relations in the form of analytic formulae — shunz / detail
  155. tested something with git (still learning this thing) — ksabo / detail
  156. salt deposit #1 (updated files I accidentally erased...) — ksabo / detail
  157. refactored neural net closure implementation — shunz / detail
  158. recoded jacobianMasterState method, still need to test it — ksabo / detail
  159. added a set of IBL3 closure models based on analytic formulae — shunz / detail
  160. restored four-equation neural net closure to its original working state — shunz / detail
  161. switch to using 4-equation IBL3 closure based on analytic formulae.  results are similar or slightly better than neural net closure — shunz / detail
  162. fixed a typo (which fortunately wasn't used yet).  added exception throws — shunz / detail
  163. fixed include filename — shunz / detail
  164. removed redundant exceptions — shunz / detail
  165. Q1DConservative for TCNE is functionally completed (only needs aesthetic changes at this point) — ksabo / detail
  166. refactored four-eqn IBL3 curve-fit closure — shunz / detail
  167. conformed to vera check: should not use "using namespace" in header files — shunz / detail
  168. fixed unit tests for after API refactoring — shunz / detail
  169. fixed unit tests for the  previous API refactoring — shunz / detail
  170. fixed ping tests: finite difference step size — shunz / detail
  171. added ping test for four-eqn IBL3 — shunz / detail
  172. added Blasius flow test case for four-eqn IBL3D. some cleanup — shunz / detail
  173. added include — shunz / detail
  174. added includes — shunz / detail
  175. checked four-eqn IBL3D on Blasius case and stagnation radial flow — shunz / detail
  176. added a stagnation flow toy case.  mucked with IBL3 for torpedo case — shunz / detail
  177. fixed toy case to keep up with API refactoring — shunz / detail
  178. added missing include related to MPI — shunz / detail
  179. suppresed file dump in system test — shunz / detail
  180. added assertions — shunz / detail
  181. add some derivates to the IBL3 output — shunz / detail
  182. relaxed pyrite tolerance — shunz / detail
  183. relaxed pyrite tolerance for intel compiler.  speed up ping test to avoid time-out — shunz / detail
  184. renamed output — shunz / detail
  185. added and refactored IBL3 output — shunz / detail
  186. make verbose_ if-tests consistent throughout — allmaras / detail
  187. fixed screen dump for checkSolve_ when residuals above tolerance — allmaras / detail
  188. added option to dump solution at each Newton iteration — allmaras / detail
  189. added pressure gradient for space-time — allmaras / detail
  190. added instantiations, etc, needed for log(p) variables with look-up porosity/permeability tables — allmaras / detail
  191. added grid-Laplacian artificial viscosity for pressure; currently hard-coded diffusion coefficient — allmaras / detail
  192. trying to fix gnu9 compiler warning — shunz / detail
  193. added "#include <utilities>" for std::move; added unit test for VectorBlock_3 — allmaras / detail
  194. fixed vera line-length squawk — allmaras / detail
  195. fixed vera line-length squawk — allmaras / detail
  196. fixed vera line-length squawk — allmaras / detail
  197. add a new curve fit model based on low-dissipative DBL3 data — shunz / detail
  198. allow for uncoupled/viscou-only IBL3 solution by tweaking the panel method — shunz / detail
  199. fixed VectorBlock_3 unit test; made ::m() and ::n() static, so 2, 3, and 4 are all consistent — allmaras / detail
  200. forgot to save changes in the last commit... — shunz / detail
  201. relaxed Jenkins timeout threshold for some large ping tests — shunz / detail
  202. minor tweak — shunz / detail
  203. speed up ping test by turning off some redundant sub-block checks — shunz / detail
  204. fix cppcheck error — shunz / detail
  205. speed up ping test by turning off tests on some sub-blocks of the jacobian — shunz / detail
  206. added directory creation for output files — allmaras / detail
  207. Don't use python2 with jenkins — galbramc / detail
  208. removed old version of adjoint-compatible potential solver for Hershey wing — allmaras / detail
  209. temporarily disabled tests involving artificial viscosity fluxes if USE_PRESSURE_AV defined — allmaras / detail
  210. make VectorBlock test-suite names unique (so make unit_build works) — allmaras / detail
  211. added unit tests for circulation integrations — allmaras / detail
  212. added circulation integrations for lift & roll as functional outputs — allmaras / detail
  213. Add Q3 and Q4 elements to Gmsh IO — galbramc / detail
  214. clean-up of circulation-base functional code/test; added drag but #ifdef'ed out, as it's not complete — allmaras / detail
  215. intermediate commit: working on hooking up PETSc for block algebraic equation system — shunz / detail
  216. Fix finding macOS Accelerate BLAS — galbramc / detail
  217. cppcheck fixes for nightly — allmaras / detail
  218. moving back to develop — hcarson / detail
  219. add empty definition to fix undefined reference in weekly test — shunz / detail
  220. add empty definition to fix undefined reference in weekly test — shunz / detail
  221. add empty definition to fix undefined reference in weekly test — shunz / detail
  222. vera fix — hcarson / detail
  223. added a new set of closure relations based on low-dissipation DBL3 data — shunz / detail
  224. updated RthCf1 correlation coefficient — shunz / detail
  225. fixed call to undefined function — shunz / detail
  226. removing unneeded test — hcarson / detail
  227. minor updates to TCNE stuff (getting back into it) — ksabo / detail
  228. added mitLG BC for four equation IBL3D — shunz / detail
  229. fixing unused var — hcarson / detail
  230. Update for latest version of refine — galbramc / detail
  231. missing space — hcarson / detail
  232. Added vpr11@mit.edu to DeveloperEmailAddresses — vpr11 / detail
  233. End of week dump. — ksabo / detail
  234. added pressure jump into source for AV sensor in two-phase porous media — allmaras / detail
  235. minor changes to SPE10 test case: added #ifdef's for log(pn), table lookup; changed — allmaras / detail
  236. added #define label for pressure jump in AV sensor source; updated unit test — allmaras / detail
  237. added new closure option (but commented off for now). updated system test case for four-eqn IBL3D on stagnation flow BL — shunz / detail
  238. zero guard for smoothabs0 — allmaras / detail
  239. updated unit tests to incorporate pressure jumps in sensor source for two-phase AV — allmaras / detail
  240. Use 2 MPI processors on macOS with Jenkins. Make TetGen optional again. — galbramc / detail
  241. Fix for finding boost — galbramc / detail
  242. Some chemsitry model unit tests - need before source term testing. — ksabo / detail
  243. Fix for 2 MPI procs on macOS — galbramc / detail
  244. Various CMake fixes — galbramc / detail
  245. Fix BuildBoost — galbramc / detail
  246. vibrational relaxation time unit tests — ksabo / detail
  247. LIP solver can consume CAPS mesh — galbramc / detail
  248. Update minimum ESP version to 1.18 — galbramc / detail
  249. Relax EGADS version requirement — galbramc / detail
  250. Fix link error — galbramc / detail
  251. Missed a file — galbramc / detail
  252. More link error fixes — galbramc / detail
  253. More link fixes — galbramc / detail
  254. Exlicit Exception instantiations. Bias for Python 3 with CMake — galbramc / detail
  255. added continuousGlobalMap() for block 2x2 AES — shunz / detail
  256. PETSc now works for coupled IBL3 block AES 3x3 — shunz / detail
  257. minor refactoring — shunz / detail
  258. cleaned up and merged sandbox cases — shunz / detail
  259. use reference velocity scale consistently — shunz / detail
  260. turned on quasi-2D closure relations for 3-eq 3D IBL — shunz / detail
  261. Missed one instantiation. More optional TetGen fixes — galbramc / detail
  262. Various small fixes — galbramc / detail
  263. added exceptions for petsc MPI implementations for block AES 3x3 — shunz / detail
  264. turned off 3D IBL transition and lag equations for system test (for now) — shunz / detail
  265. turned off some TBD MPI stuff in petsc block AES 3x3 to avoid compiling errors — shunz / detail
  266. fixed unused variable warnings — shunz / detail
  267. fix compiling error in sandbox case — shunz / detail
  268. Added quasi-2D turbulent closure to four-eqn IBL3 formulation — shunz / detail
  269. fixed deprecated macro — shunz / detail
  270. First set of updates from cleaning up develop branch. Contains code and tests related to adding a spatially varying a-field (i.e. from previous adapt soln) in Homotopy — blsc / detail
  271. Removed sourceCoarse and sourceFine in lieu of sourceTraceJump — galbramc / detail
  272. Move Surreal into SANS namespace — galbramc / detail
  273. Forgot a file — galbramc / detail
  274. Missed MPI SurrealS — galbramc / detail
  275. Add missing include — galbramc / detail
  276. Remove SurrealS(Real,Real) constructor — galbramc / detail
  277. More fixes for modified Surreal — galbramc / detail
  278. Fix warnings — galbramc / detail
  279. Setup to run VMSDBR2 on fixed Joukowski meshes — galbramc / detail
  280. Fix uninitialized variable warnings — galbramc / detail
  281. Fix vera warning — galbramc / detail
  282. src/LinearAlgebra/ — blsc / detail
  283. First pass at prototyping a globally constrained algebraic equation set — blsc / detail
  284. Updates to globally constrained equations to include condensation of matrix in PETSc — blsc / detail
  285. Updates for first round of parallelizing the homotopy — blsc / detail
  286. Parallel homotopy appears to be working — blsc / detail
  287. EGADS interface refactoring. Added meanline blade. — galbramc / detail
  288. Fixes for EGTess — galbramc / detail
  289. More fixes to the EGADS cleanup — galbramc / detail
  290. More EGADS fixes — galbramc / detail
  291. Fix compile error — galbramc / detail
  292. Fix warning — galbramc / detail
  293. Fix more warnings — galbramc / detail
  294. A few tweeks on the homotopy and 3D set up — blsc / detail
  295. Updated interface for globally constrained equations so the jacobian for the pde and the constraints are in seperate functions — blsc / detail
  296. The small problem for static condensation is calculated on one processor then broadcast, that way there are on finite precision inconsistencies — blsc / detail
  297. Added template parameter to determine if (PETSc) should do a shur complement from block 2x2. Note, if we're not using PETSc, then the block matrix is solved as is. This is because the shur complement is only a work around for parallel communication issues. — blsc / detail
  298. ... because if you hard code tecplot for 4 levels of grid refinement on output you get a 300Gb tecplot file in 3D ... — blsc / detail
  299. Refactor CubicCamber. Add Normal vector field. — galbramc / detail
  300. Forgot files — galbramc / detail
  301. Add missing includes — galbramc / detail
  302. Number of global constraints is now a runtime option. The global coupling uses a CRS matrix structure, as opposed to MatrixD, since the CRS structure is already there. — blsc / detail
  303. Fixed bug with small system decomposition. The matrix was incorrectly sized for runtime constraints — blsc / detail
  304. Fix field normal vector check for parallel — galbramc / detail
  305. Resolved issues that came up due to merging — blsc / detail
  306. First pass at prototyping a globally constrained algebraic equation set — blsc / detail
  307. Updates to globally constrained equations to include condensation of matrix in PETSc — blsc / detail
  308. Updates for first round of parallelizing the homotopy — blsc / detail
  309. Parallel homotopy appears to be working — blsc / detail
  310. A few tweeks on the homotopy and 3D set up — blsc / detail
  311. Updated interface for globally constrained equations so the jacobian for the pde and the constraints are in seperate functions — blsc / detail
  312. The small problem for static condensation is calculated on one processor then broadcast, that way there are on finite precision inconsistencies — blsc / detail
  313. Added template parameter to determine if (PETSc) should do a shur complement from block 2x2. Note, if we're not using PETSc, then the block matrix is solved as is. This is because the shur complement is only a work around for parallel communication issues. — blsc / detail
  314. ... because if you hard code tecplot for 4 levels of grid refinement on output you get a 300Gb tecplot file in 3D ... — blsc / detail
  315. Number of global constraints is now a runtime option. The global coupling uses a CRS matrix structure, as opposed to MatrixD, since the CRS structure is already there. — blsc / detail
  316. Fixed bug with small system decomposition. The matrix was incorrectly sized for runtime constraints — blsc / detail
  317. Clean up after merging from develop — blsc / detail
  318. More merging issues — blsc / detail
  319. Added RotorSource for Euler equations — galbramc / detail
  320. Various small fixes — galbramc / detail
  321. Fix compile error — galbramc / detail
  322. A few more fixes — galbramc / detail
  323. Fix unit test error — galbramc / detail
  324. Bulk of unit tests done. — ksabo / detail
  325. Update refine libraries — galbramc / detail
  326. src/ — blsc / detail
  327. Missing unit tests and ability to daisy chain globally constrained algebraic equation sets — blsc / detail
  328. Missed an update for the serial version of PETSc — blsc / detail
  329. Further speed improvements — galbramc / detail
  330. Fix VMSDBR2 adjoint bug. Update refine build. — galbramc / detail
  331. Some fixes for the Rotor source — galbramc / detail
  332. Trying DG Normal vector field — galbramc / detail
  333. Correction to Rotor source — galbramc / detail
  334. One more fix to Rotor source — galbramc / detail
  335. One more fix — galbramc / detail
  336. updated file names — ksabo / detail
  337. updated file names (round 2) — ksabo / detail
  338. Fixed warnings and other minor things — ksabo / detail
  339. 150 char line error fix — ksabo / detail
  340. used brackets for matrix call, fixed now — ksabo / detail
  341. Some cleanup of PETSc Shur solve — galbramc / detail
  342. Fixes for MKL with Block 2x2 — galbramc / detail
  343. Bug fixes for homotopy and some 3D bugs — blsc / detail
  344. Fixed a few bug (undefined param and timeout) — blsc / detail
  345. fixed stack-buffer-overflow error in temperature data structures — ksabo / detail
  346. Missing instantiations, BC that only existed for local testing purposes removed. — blsc / detail
  347. fixed read access error from electron indexing bug — ksabo / detail
  348. fixed compiler warnings — ksabo / detail
  349. dropped tol to 1e-11 from 1e-12, removed extra {} that may have been causing an issue — ksabo / detail
  350. renamed test suite (explicitly added TCNE to name) - was causing conflict error — ksabo / detail
  351. SANS_Nightly fix, efma line compiler warning deleted — ksabo / detail
  352. updated reverse reaction rate temperature calculations — ksabo / detail
  353. Add trace quadrature checking to isValidCell_VMSD. — hcarson / detail
  354. Refactored global constraintes — galbramc / detail
  355. Forgot files — galbramc / detail
  356. Compile fixes — galbramc / detail
  357. Fix unit test — galbramc / detail
  358. Added a new ParamFieldBuilder specialization for (log-permeability, porosity, gen-H) param fields. Added a unit test. — savithru / detail
  359. added pde/IncompressibleNS — allmaras / detail
  360. added 1D incompressible NS for fully developed channel flow with sansLG Robin BCs — allmaras / detail
  361. added 2nd weighting parameter to weightBC; 1st parameter is for Dirichlet / adjoint state, — allmaras / detail
  362. added 2nd weighting parameter to weightBC; missed one file — allmaras / detail
  363. added Robin_sansLG BC catagory — allmaras / detail
  364. IO file check flag -> true — allmaras / detail
  365. 1D incompressible NS solver for fully developed channel flow — allmaras / detail
  366. bug fixes — allmaras / detail
  367. Major refactor of the two-phase PDE classes to support a (log-permeability, porosity) param-field. The artificial viscosity classes use a (log-permeability, porosity, log-H) param-field. — savithru / detail
  368. Updated ErrorEstimate_DGBR2 instantiations — savithru / detail
  369. Updated tests. All unit and system tests compile now. — savithru / detail
  370. added test for -Identity() initializer — allmaras / detail
  371. Fix so -DLA::Identity() works properly — galbramc / detail
  372. added BCs for 1D RANS-SA for channel flow — allmaras / detail
  373. unit tests for 1D RANS-SA for channel flow — allmaras / detail
  374. unit tests: missed one — allmaras / detail
  375. unit test output pattern test files — allmaras / detail
  376. 1D RANS-SA test case for fully developed channel flow -- preliminary — allmaras / detail
  377. updated test case — allmaras / detail
  378. More refactoring to get sandbox cases to compile. — savithru / detail
  379. Fixed a unit test. — savithru / detail
  380. Missed a sandbox case. — savithru / detail
  381. Reverting include path for boost output_test_stream — savithru / detail
  382. made algebraic eqn-set files more consistent between Galerkin and Galerkin_Stabilized — allmaras / detail
  383. instantiated VectorS<2> output — allmaras / detail
  384. Updated discretizations and PDE interfaces to use both paramL and paramR when evaluating fluxAdvectiveUpwind or fluxAdvectiveUpwindSpaceTime. This is important for the two-phase flow PDE, where the temporal flux depends on the porosity param-field value (which can be heterogeneous). — savithru / detail
  385. Update 2D ugrid reader for UNFORATTED (.r8.ugrid) files. — galbramc / detail
  386. Fix warning — galbramc / detail
  387. Fix warning — galbramc / detail
  388. added Robin BC dot product tests; currently commented out, since they fail to compile — allmaras / detail
  389. added Tensor-Vector dot-products: e.g. dot( VectorX, TensorMatrixQ ) — allmaras / detail
  390. clean up: MatrixS<D,D,MatrixQ> -> TensorMatrixQ — allmaras / detail
  391. needed additional #include's — allmaras / detail
  392. added ND ctor for BCs: BC( PDE, BCArgs ) — allmaras / detail
  393. added dist parameters to certain functions; added jacobianMasterState; code clean-up — allmaras / detail
  394. added skin friction / drag output for 1D incompressible NS channel flow — allmaras / detail
  395. added #if's to try different combinations of '(gradphi . K . nHat) betaBC^t rsdBC'; — allmaras / detail
  396. Updated FV-TPFA discretization to work for heterogeneous properties + some cleanup. — savithru / detail
  397. Added missing includes — savithru / detail
  398. removed dot-products supporting (K . nHat) operator in Robin_sansLG BCs, and reverted — allmaras / detail
  399. added IncompressibleNSLib to unit test builders — allmaras / detail
  400. latest sandbox tests for 1D fully developed channel flow — allmaras / detail
  401. Updated global contraints. Solve rotor speed at specified power. — galbramc / detail
  402. Compile fixes — galbramc / detail
  403. Add missing files — galbramc / detail
  404. added optional parameter to output_gnuplot for number of points per element (default remains 11) — allmaras / detail
  405. code cleanup for 1D NS/RANS — allmaras / detail
  406. solution function for 1D RANS: analytic law-of-the-wall for SA — allmaras / detail
  407. missed a pattern file — allmaras / detail
  408. missed a unit test file — allmaras / detail
  409. updated 1D RANS fully developed channel flow case to (a) work, (b) output useful data, — allmaras / detail
  410. Fix all output functionals to properly work in parallel — galbramc / detail
  411. name change for test suite to avoid link conflict for 'make unit' — allmaras / detail
  412. Fix compile error — galbramc / detail
  413. Compile fix — galbramc / detail
  414. Missing include — galbramc / detail
  415. More missing includes — galbramc / detail
  416. More missing includes — galbramc / detail
  417. reverted to depricated include directory for <boost/test/unit_test.hpp> — allmaras / detail
  418. More missing include fixes — galbramc / detail
  419. Upgrade to AFLR 10.8.7 — galbramc / detail
  420. Update AFLR libraries — galbramc / detail
  421. src/ — blsc / detail
  422. Updated BC::isValidState interface so mitState BCs can check if the boundary state generated is also valid — blsc / detail
  423. Removed file that didn't work out and shouldn't have been commited — blsc / detail
  424. Fix AFLR library order — galbramc / detail
  425. Formatting fixes — blsc / detail
  426. Missing instantiation and arguments flipped causing a unit test to fail — blsc / detail
  427. Fixes for AFLR4 and EGADS updates — galbramc / detail
  428. Fix for wake sheets — galbramc / detail
  429. Various small fixes — galbramc / detail
  430. Allow specified interior traces — galbramc / detail
  431. Compile fixes. Allow UnionJack to work in parallel — galbramc / detail
  432. Fix compile error — galbramc / detail
  433. removed 1D incompressible NS channel flow test case -- won't compile due to double — allmaras / detail
  434. Fixes for parallel specified interior traces. Added ParkMMS and EntropyProduction output. — galbramc / detail
  435. Forgot files — galbramc / detail
  436. Fixes for parallel interior traces — galbramc / detail
  437. Fix uninitialized data — galbramc / detail
  438. Fix intel warning — galbramc / detail
  439. Added new SPE10 cases for time-marching FV and DGBR2+AV. — savithru / detail
  440. Fix parallel DG DOF indexing for multiple cell groups — galbramc / detail
  441. fixes for jenkins squawks — allmaras / detail
  442. Fix EG zombies — galbramc / detail
  443. missing #include <vector> — allmaras / detail
  444. fixed warning for un-used typedef — allmaras / detail
  445. added isValidState with (x,time,nx,q) params for Dirichlet — allmaras / detail
  446. Hardening ReadSolution_PX to throw uniformly across MPI if rank 0 fails to load the file. Can now use try catch around restart blocks! — hcarson / detail
  447. fixed uninitialized variables in test — allmaras / detail
  448. removed redundant instantiation — allmaras / detail
  449. removed unneeded print statements and a typo — hcarson / detail
  450. Nightly fixes — galbramc / detail
  451. Various small fixes — galbramc / detail
  452. Fix to erroneous logic — hcarson / detail
  453. Make safe_at work for any container type, and reduce code duplication — hcarson / detail
  454. Nightly fixes — galbramc / detail
  455. More nightly fixes — galbramc / detail
  456. fixed nightly warning on unused variable — allmaras / detail
  457. Relax execution time — galbramc / detail
  458. Changed isValid to check: qbar + qp at cell quads, and qbar, qbar + qpL and qbar + qpR for interior traces. These are the only values used in flux evaluation — hcarson / detail

#265 (Jun 20, 2020, 2:49:59 AM)

  1. relocate QauxvInterpret forward declaration in prep for 3D stuff — shunz / detail
  2. Added basic stuff for 3D IBL — shunz / detail
  3. Minor cleanup — shunz / detail
  4. Initial pass on PDEIBL3D — shunz / detail
  5. Filled in 3D IBL closure with fully 3D components set to zero — shunz / detail
  6. Added BCNone for IBL3D — shunz / detail
  7. added a working version of sandbox case for IBL3D — shunz / detail
  8. Added a sheet grid of triangles in 3D for IBL3D — shunz / detail
  9. Added instantiation — shunz / detail
  10. Intermediate commit — shunz / detail
  11. Working on integrands for first 3D IBL case — shunz / detail
  12. More fixes to integrand classes for IBL3D — shunz / detail
  13. Fixed instantiations for IBL3D — shunz / detail
  14. Add explicit instantiations and fix typos in closure class — shunz / detail
  15. Initial version of local Cartesian basis construction for 3D IBL — shunz / detail
  16. Minor cleanup — shunz / detail
  17. Fix constuction of q1 and q2 vectors in case of stagnation flows — shunz / detail
  18. Add velocity gradient calculation in cell integrand of 3D IBL — shunz / detail
  19. Refactor and add a 2D stagnation flow test case — shunz / detail
  20. Add a 3D quad grid — shunz / detail
  21. Update cmake list for unit grid test — shunz / detail
  22. Fix typo in 3D quad sheet grid — shunz / detail
  23. fix bug in qauxv gradient calculation in 3D IBL cell integrand — shunz / detail
  24. Fix the scale and dimension of dissipation integral in 3D integral — shunz / detail
  25. fix a typo in thickness identity — shunz / detail
  26. Add more options to 3D IBL stagnation flow case, including quad grid, solution initialization, — shunz / detail
  27. one more bug fix in cell integrand for 3D IBL — shunz / detail
  28. Bugfix in calculation of trace unit normal vector for area cells in 3D — shunz / detail
  29. Add Nishida's crossflow closure.  Add pyrite check of stagnation flow case for 3D IBL.  Minor addition for debugging in PDEIBL3D — shunz / detail
  30. fix dependents of refactoring of GetSolnDofCell_IBL — shunz / detail
  31. Add a 3D flat plate source panel method but haven't tested yet — shunz / detail
  32. intermediate commit: minor clenaup and add guards. — shunz / detail
  33. intermediate commit: working on 3D coupled IBL for torpedo cass — shunz / detail
  34. add 3x3 equation system — shunz / detail
  35. typo fix. add partial instantiations for system 3x3 vector and matrix types — shunz / detail
  36. add linesearch data type for 3x3 equation system — shunz / detail
  37. add missing include — shunz / detail
  38. intermediate commit: fix many compiling errors in the way of running torpedo case for IBL3D. switching computer to continue the work... — shunz / detail
  39. refactor projection to Qauxi — shunz / detail
  40. add interior trace integrand for projection onto Qauxi — shunz / detail
  41. minor fix — shunz / detail
  42. add instantiations for IBL3D torpedo case — shunz / detail
  43. add instantiations for coupled IBL3D — shunz / detail
  44. remove unnecessary assert — shunz / detail
  45. fix for coupled IBL case to compile and run — shunz / detail
  46. fix uninitialized dummy DOFs — shunz / detail
  47. fix setDOFFrom in Qauxv 3D (missing q_y previously) — shunz / detail
  48. Coupled 3D IBL case converged on some simple variants of the torpedo case: linear and mildly nonlinear radial velocity distribution with attached laminar BLs — shunz / detail
  49. Tried triangle grid as well: fine on radially linear velocity distribution but couldn't converge on a more nonlinear case — shunz / detail
  50. cleaned up unused stuff — shunz / detail
  51. refactor SetIBLoutputCellGroup to accommodate both 3D and 2D IBL — shunz / detail
  52. remove outdated include — shunz / detail
  53. more refactoring of SetIBLoutputCellGroup for 3D IBL.  working progress.  switching computer — shunz / detail
  54. intermediate commit. switching computer. — shunz / detail
  55. enable tecplot output for 3D IBL — shunz / detail
  56. added PyDict options for Verbose and writeMarketMatrix for UMFPACK — allmaras / detail
  57. add full-state BC for IBL3D with corresponding boundary trace integrand.  verified on an uncoupled Blasius case — shunz / detail
  58. add a coupled IBL3D Blasius case — shunz / detail
  59. implement PTC for coupled IBL 3x3 system — shunz / detail
  60. add commented-out stuff for turning off laminar amplification and lag equations in IBL3D — shunz / detail
  61. fix typo in commented-out stuff — shunz / detail
  62. enable rotated mesh for IBL3D torpedo case — shunz / detail
  63. set up a torpedo with grid aligned with xy axes.  turned off laminar amplification and lag equations [need to be brought back after testing purely laminar BLs] — shunz / detail
  64. minor change to test case — shunz / detail
  65. minor refactoring on Blasius inflow BC params — shunz / detail
  66. rename test cases — shunz / detail
  67. speed up panel-related jacobian calculation using cached influence matrix in place of surrealized qauxifld — shunz / detail
  68. add jacobian timing for refactoring purpose — shunz / detail
  69. add similar (to DBL3) Falkner-Skan inflow bc for IBL3D with non-constant inflow state. set up a tornado case with rotated xy grid to compare with DBL3 — shunz / detail
  70. minor refactoring of test cases — shunz / detail
  71. remove trivial zero z velocity component to speed up panel method — shunz / detail
  72. minor refactoring — shunz / detail
  73. typo fix — shunz / detail
  74. precompute inviscid velocity for panel, which resulted in O(10) speedup in related residual calculation. fix DOF indexing in residual/jacobian precomputation — shunz / detail
  75. define macro to comment off some lines for timing/refactoring — shunz / detail
  76. minor comments — shunz / detail
  77. add ping test for coupled IBL in 3x3 block system — shunz / detail
  78. attempt to mirror tets in XField3D_Box_Tet_X1_WakeCut — allmaras / detail
  79. reverted to original prism-split coding; remainder of code is hard-coded for the — allmaras / detail
  80. fix typo in Cf2 closure, although it didn't change the torpedo case results much — shunz / detail
  81. Fix dot for VectorBlock — galbramc / detail
  82. added PyDict control of wake & Kutta Nitsche parameters — allmaras / detail
  83. added PyDict solve check option to UMFPACK; currently commented out actual check — allmaras / detail
  84. Fixes for checking the UMFPACK solve — galbramc / detail
  85. add a wall term to dissipation relation of Nishida's closure, although it didn't affect things much — shunz / detail
  86. add a test case of fx67-k-170 airfoil — shunz / detail
  87. minor edit to output filenames at convergence failures — shunz / detail
  88. resolve merge conflict — shunz / detail
  89. changed default flux of IBL to LF flux — shunz / detail
  90. add a test case for drag polar — shunz / detail
  91. ran drag polar cases — shunz / detail
  92. refactored reference speed in transition model — shunz / detail
  93. typo fix — shunz / detail
  94. rename working directory — shunz / detail
  95. refator characteristic speed for PTC — shunz / detail
  96. refator characteristic speed for PTC — shunz / detail
  97. Add unit tests demonstrating that the step matrix calculation is stable to scaling — hcarson / detail
  98. update pyrite files — shunz / detail
  99. refactor 3D IBL closure API to allow for alternative closure models — shunz / detail
  100. save 3D closure relations in a separate header — shunz / detail
  101. add neural net closure for 3D IBL — shunz / detail
  102. run drag polar on finer grids — shunz / detail
  103. switch to run on acdl desktop — shunz / detail
  104. fix memory leak warning caused by accessing index -1 — shunz / detail
  105. minor update — shunz / detail
  106. mucking with PETSc for IBL3 — shunz / detail
  107. instantiate MKL_PARDISO solver for matrix block 3x3 — shunz / detail
  108. tried MKL_PARDISO solver for IBL3 — shunz / detail
  109. Adding test that Explicitly calculating the step from the metric directly is not unstable. Cases in 2D and 3D, showing stability to an AR of 2^10 in 3D, and 2^64 in 2D. — hcarson / detail
  110. minor typo fix — shunz / detail
  111. fix formatting — shunz / detail
  112. add mitLG BC for IBL3 — shunz / detail
  113. minor refactoring — shunz / detail
  114. switch to the same input parameters as DBL3 — shunz / detail
  115. add LF flux to IBL3 — shunz / detail
  116. Changes to ErrorModel to allow for the new exact nodal metric calculation — hcarson / detail
  117. Changes to ErrorModel to allow for the new exact nodal metric calculation — hcarson / detail
  118. pre merge add.... wth? — hcarson / detail
  119. add Dirichlet mitLG inflow BC to a Blasius flow test case — shunz / detail
  120. Jenkins fix — hcarson / detail
  121. reverting to the develop branch of ErrorModel — hcarson / detail
  122. fixes to case — hcarson / detail
  123. fixes to case — hcarson / detail
  124. intermediate commit: added 4-equation neural net closure model.  working on 4-equation IBL3D pde class — shunz / detail
  125. remove extraneous tamplate keyword — shunz / detail
  126. Various changes for arthur: Commented the adjoint_wo_p things from SolverInterface_VMSD_BR2, reducing the memory reqs. Made the Deltawing adapts more uniform and fit with the plan. Added the Solve case for the VMSD delta wing. — hcarson / detail
  127. added soruce terms for the lateral curvature equation of IBL3 — shunz / detail
  128. removed re-definition — shunz / detail
  129. refactored and added PDE and BC for four-equation 3D IBL class.  added a starting point for torpedo case — shunz / detail
  130. separated classes of 3D IBL and IBLFourEqn — shunz / detail
  131. generalized templates in IBL3-related integrands — shunz / detail
  132. added instantiations for four-equation 3D IBL — shunz / detail
  133. fixed instantiation typo — shunz / detail
  134. turned on verbose linesearch printout — shunz / detail
  135. added a visous-only Blasius case for 4-equation 3D IBL.  added a missing include — shunz / detail
  136. refactored reference coordinate gradient for speedup.  add/edit comments for clarity — shunz / detail
  137. typo fix: gradqe*E_qesq.  minor edits — shunz / detail
  138. turned off printout in unit testing — shunz / detail
  139. cosmetic changes — shunz / detail
  140. refactored neural net closure models: H22, Hd1, Hc2 — shunz / detail
  141. added output for four-equation 3D IBL — shunz / detail
  142. fixed auxi equation (wall transpiration): previous mass flux missed crossflow component — shunz / detail
  143. previous fix to wall transpiration (auxi equation) didn't fix.  it is now fixed.  added unit test — shunz / detail
  144. minor tweak — shunz / detail
  145. minor cleanup — shunz / detail
  146. add velocity gradient output to IBL — shunz / detail
  147. add instantiation — shunz / detail
  148. added IBL3 closure relations in the form of analytic formulae — shunz / detail
  149. refactored neural net closure implementation — shunz / detail
  150. added a set of IBL3 closure models based on analytic formulae — shunz / detail
  151. restored four-equation neural net closure to its original working state — shunz / detail
  152. switch to using 4-equation IBL3 closure based on analytic formulae.  results are similar or slightly better than neural net closure — shunz / detail
  153. fixed a typo (which fortunately wasn't used yet).  added exception throws — shunz / detail
  154. fixed include filename — shunz / detail
  155. removed redundant exceptions — shunz / detail
  156. refactored four-eqn IBL3 curve-fit closure — shunz / detail
  157. conformed to vera check: should not use "using namespace" in header files — shunz / detail
  158. fixed unit tests for after API refactoring — shunz / detail
  159. fixed unit tests for the  previous API refactoring — shunz / detail
  160. fixed ping tests: finite difference step size — shunz / detail
  161. added ping test for four-eqn IBL3 — shunz / detail
  162. added Blasius flow test case for four-eqn IBL3D. some cleanup — shunz / detail
  163. added include — shunz / detail
  164. added includes — shunz / detail
  165. checked four-eqn IBL3D on Blasius case and stagnation radial flow — shunz / detail
  166. added a stagnation flow toy case.  mucked with IBL3 for torpedo case — shunz / detail
  167. fixed toy case to keep up with API refactoring — shunz / detail
  168. added missing include related to MPI — shunz / detail
  169. suppresed file dump in system test — shunz / detail
  170. added assertions — shunz / detail
  171. add some derivates to the IBL3 output — shunz / detail
  172. relaxed pyrite tolerance — shunz / detail
  173. relaxed pyrite tolerance for intel compiler.  speed up ping test to avoid time-out — shunz / detail
  174. renamed output — shunz / detail
  175. added and refactored IBL3 output — shunz / detail
  176. make verbose_ if-tests consistent throughout — allmaras / detail
  177. fixed screen dump for checkSolve_ when residuals above tolerance — allmaras / detail
  178. added option to dump solution at each Newton iteration — allmaras / detail
  179. added pressure gradient for space-time — allmaras / detail
  180. added instantiations, etc, needed for log(p) variables with look-up porosity/permeability tables — allmaras / detail
  181. added grid-Laplacian artificial viscosity for pressure; currently hard-coded diffusion coefficient — allmaras / detail
  182. trying to fix gnu9 compiler warning — shunz / detail
  183. added "#include <utilities>" for std::move; added unit test for VectorBlock_3 — allmaras / detail
  184. fixed vera line-length squawk — allmaras / detail
  185. fixed vera line-length squawk — allmaras / detail
  186. fixed vera line-length squawk — allmaras / detail
  187. add a new curve fit model based on low-dissipative DBL3 data — shunz / detail
  188. allow for uncoupled/viscou-only IBL3 solution by tweaking the panel method — shunz / detail
  189. fixed VectorBlock_3 unit test; made ::m() and ::n() static, so 2, 3, and 4 are all consistent — allmaras / detail
  190. forgot to save changes in the last commit... — shunz / detail
  191. relaxed Jenkins timeout threshold for some large ping tests — shunz / detail
  192. minor tweak — shunz / detail
  193. speed up ping test by turning off some redundant sub-block checks — shunz / detail
  194. fix cppcheck error — shunz / detail
  195. speed up ping test by turning off tests on some sub-blocks of the jacobian — shunz / detail
  196. added directory creation for output files — allmaras / detail
  197. Don't use python2 with jenkins — galbramc / detail
  198. removed old version of adjoint-compatible potential solver for Hershey wing — allmaras / detail
  199. temporarily disabled tests involving artificial viscosity fluxes if USE_PRESSURE_AV defined — allmaras / detail
  200. make VectorBlock test-suite names unique (so make unit_build works) — allmaras / detail
  201. added unit tests for circulation integrations — allmaras / detail
  202. added circulation integrations for lift & roll as functional outputs — allmaras / detail
  203. Add Q3 and Q4 elements to Gmsh IO — galbramc / detail
  204. clean-up of circulation-base functional code/test; added drag but #ifdef'ed out, as it's not complete — allmaras / detail
  205. Fix finding macOS Accelerate BLAS — galbramc / detail
  206. cppcheck fixes for nightly — allmaras / detail
  207. moving back to develop — hcarson / detail
  208. add empty definition to fix undefined reference in weekly test — shunz / detail
  209. add empty definition to fix undefined reference in weekly test — shunz / detail
  210. vera fix — hcarson / detail
  211. removing unneeded test — hcarson / detail
  212. fixing unused var — hcarson / detail
  213. Update for latest version of refine — galbramc / detail
  214. missing space — hcarson / detail
  215. Added vpr11@mit.edu to DeveloperEmailAddresses — vpr11 / detail

#264 (Jun 13, 2020, 1:52:07 AM)

  1. relocate QauxvInterpret forward declaration in prep for 3D stuff — shunz / detail
  2. Added basic stuff for 3D IBL — shunz / detail
  3. Minor cleanup — shunz / detail
  4. Initial pass on PDEIBL3D — shunz / detail
  5. Filled in 3D IBL closure with fully 3D components set to zero — shunz / detail
  6. Added BCNone for IBL3D — shunz / detail
  7. added a working version of sandbox case for IBL3D — shunz / detail
  8. Added a sheet grid of triangles in 3D for IBL3D — shunz / detail
  9. Added instantiation — shunz / detail
  10. Intermediate commit — shunz / detail
  11. Working on integrands for first 3D IBL case — shunz / detail
  12. More fixes to integrand classes for IBL3D — shunz / detail
  13. Fixed instantiations for IBL3D — shunz / detail
  14. Add explicit instantiations and fix typos in closure class — shunz / detail
  15. Initial version of local Cartesian basis construction for 3D IBL — shunz / detail
  16. Minor cleanup — shunz / detail
  17. Fix constuction of q1 and q2 vectors in case of stagnation flows — shunz / detail
  18. Add velocity gradient calculation in cell integrand of 3D IBL — shunz / detail
  19. Refactor and add a 2D stagnation flow test case — shunz / detail
  20. Add a 3D quad grid — shunz / detail
  21. Update cmake list for unit grid test — shunz / detail
  22. Fix typo in 3D quad sheet grid — shunz / detail
  23. fix bug in qauxv gradient calculation in 3D IBL cell integrand — shunz / detail
  24. Fix the scale and dimension of dissipation integral in 3D integral — shunz / detail
  25. fix a typo in thickness identity — shunz / detail
  26. Add more options to 3D IBL stagnation flow case, including quad grid, solution initialization, — shunz / detail
  27. one more bug fix in cell integrand for 3D IBL — shunz / detail
  28. Bugfix in calculation of trace unit normal vector for area cells in 3D — shunz / detail
  29. Add Nishida's crossflow closure.  Add pyrite check of stagnation flow case for 3D IBL.  Minor addition for debugging in PDEIBL3D — shunz / detail
  30. fix dependents of refactoring of GetSolnDofCell_IBL — shunz / detail
  31. Add a 3D flat plate source panel method but haven't tested yet — shunz / detail
  32. intermediate commit: minor clenaup and add guards. — shunz / detail
  33. intermediate commit: working on 3D coupled IBL for torpedo cass — shunz / detail
  34. add 3x3 equation system — shunz / detail
  35. typo fix. add partial instantiations for system 3x3 vector and matrix types — shunz / detail
  36. add linesearch data type for 3x3 equation system — shunz / detail
  37. add missing include — shunz / detail
  38. intermediate commit: fix many compiling errors in the way of running torpedo case for IBL3D. switching computer to continue the work... — shunz / detail
  39. refactor projection to Qauxi — shunz / detail
  40. add interior trace integrand for projection onto Qauxi — shunz / detail
  41. minor fix — shunz / detail
  42. add instantiations for IBL3D torpedo case — shunz / detail
  43. add instantiations for coupled IBL3D — shunz / detail
  44. remove unnecessary assert — shunz / detail
  45. fix for coupled IBL case to compile and run — shunz / detail
  46. fix uninitialized dummy DOFs — shunz / detail
  47. fix setDOFFrom in Qauxv 3D (missing q_y previously) — shunz / detail
  48. Coupled 3D IBL case converged on some simple variants of the torpedo case: linear and mildly nonlinear radial velocity distribution with attached laminar BLs — shunz / detail
  49. Tried triangle grid as well: fine on radially linear velocity distribution but couldn't converge on a more nonlinear case — shunz / detail
  50. cleaned up unused stuff — shunz / detail
  51. refactor SetIBLoutputCellGroup to accommodate both 3D and 2D IBL — shunz / detail
  52. remove outdated include — shunz / detail
  53. more refactoring of SetIBLoutputCellGroup for 3D IBL.  working progress.  switching computer — shunz / detail
  54. intermediate commit. switching computer. — shunz / detail
  55. enable tecplot output for 3D IBL — shunz / detail
  56. add full-state BC for IBL3D with corresponding boundary trace integrand.  verified on an uncoupled Blasius case — shunz / detail
  57. add a coupled IBL3D Blasius case — shunz / detail
  58. implement PTC for coupled IBL 3x3 system — shunz / detail
  59. add commented-out stuff for turning off laminar amplification and lag equations in IBL3D — shunz / detail
  60. fix typo in commented-out stuff — shunz / detail
  61. enable rotated mesh for IBL3D torpedo case — shunz / detail
  62. set up a torpedo with grid aligned with xy axes.  turned off laminar amplification and lag equations [need to be brought back after testing purely laminar BLs] — shunz / detail
  63. minor change to test case — shunz / detail
  64. minor refactoring on Blasius inflow BC params — shunz / detail
  65. rename test cases — shunz / detail
  66. speed up panel-related jacobian calculation using cached influence matrix in place of surrealized qauxifld — shunz / detail
  67. add jacobian timing for refactoring purpose — shunz / detail
  68. add similar (to DBL3) Falkner-Skan inflow bc for IBL3D with non-constant inflow state. set up a tornado case with rotated xy grid to compare with DBL3 — shunz / detail
  69. minor refactoring of test cases — shunz / detail
  70. remove trivial zero z velocity component to speed up panel method — shunz / detail
  71. minor refactoring — shunz / detail
  72. typo fix — shunz / detail
  73. precompute inviscid velocity for panel, which resulted in O(10) speedup in related residual calculation. fix DOF indexing in residual/jacobian precomputation — shunz / detail
  74. define macro to comment off some lines for timing/refactoring — shunz / detail
  75. minor comments — shunz / detail
  76. add ping test for coupled IBL in 3x3 block system — shunz / detail
  77. fix typo in Cf2 closure, although it didn't change the torpedo case results much — shunz / detail
  78. add a wall term to dissipation relation of Nishida's closure, although it didn't affect things much — shunz / detail
  79. add a test case of fx67-k-170 airfoil — shunz / detail
  80. minor edit to output filenames at convergence failures — shunz / detail
  81. resolve merge conflict — shunz / detail
  82. changed default flux of IBL to LF flux — shunz / detail
  83. add a test case for drag polar — shunz / detail
  84. ran drag polar cases — shunz / detail
  85. refactored reference speed in transition model — shunz / detail
  86. typo fix — shunz / detail
  87. rename working directory — shunz / detail
  88. refator characteristic speed for PTC — shunz / detail
  89. refator characteristic speed for PTC — shunz / detail
  90. update pyrite files — shunz / detail
  91. refactor 3D IBL closure API to allow for alternative closure models — shunz / detail
  92. save 3D closure relations in a separate header — shunz / detail
  93. add neural net closure for 3D IBL — shunz / detail
  94. run drag polar on finer grids — shunz / detail
  95. switch to run on acdl desktop — shunz / detail
  96. fix memory leak warning caused by accessing index -1 — shunz / detail
  97. minor update — shunz / detail
  98. mucking with PETSc for IBL3 — shunz / detail
  99. instantiate MKL_PARDISO solver for matrix block 3x3 — shunz / detail
  100. tried MKL_PARDISO solver for IBL3 — shunz / detail
  101. minor typo fix — shunz / detail
  102. fix formatting — shunz / detail
  103. add mitLG BC for IBL3 — shunz / detail
  104. minor refactoring — shunz / detail
  105. switch to the same input parameters as DBL3 — shunz / detail
  106. add LF flux to IBL3 — shunz / detail
  107. add Dirichlet mitLG inflow BC to a Blasius flow test case — shunz / detail
  108. intermediate commit: added 4-equation neural net closure model.  working on 4-equation IBL3D pde class — shunz / detail
  109. remove extraneous tamplate keyword — shunz / detail
  110. added soruce terms for the lateral curvature equation of IBL3 — shunz / detail
  111. removed re-definition — shunz / detail
  112. refactored and added PDE and BC for four-equation 3D IBL class.  added a starting point for torpedo case — shunz / detail
  113. separated classes of 3D IBL and IBLFourEqn — shunz / detail
  114. generalized templates in IBL3-related integrands — shunz / detail
  115. added instantiations for four-equation 3D IBL — shunz / detail
  116. fixed instantiation typo — shunz / detail
  117. turned on verbose linesearch printout — shunz / detail
  118. added a visous-only Blasius case for 4-equation 3D IBL.  added a missing include — shunz / detail
  119. refactored reference coordinate gradient for speedup.  add/edit comments for clarity — shunz / detail
  120. typo fix: gradqe*E_qesq.  minor edits — shunz / detail
  121. turned off printout in unit testing — shunz / detail
  122. cosmetic changes — shunz / detail
  123. refactored neural net closure models: H22, Hd1, Hc2 — shunz / detail
  124. added output for four-equation 3D IBL — shunz / detail
  125. fixed auxi equation (wall transpiration): previous mass flux missed crossflow component — shunz / detail
  126. previous fix to wall transpiration (auxi equation) didn't fix.  it is now fixed.  added unit test — shunz / detail
  127. minor tweak — shunz / detail
  128. minor cleanup — shunz / detail
  129. add velocity gradient output to IBL — shunz / detail
  130. add instantiation — shunz / detail
  131. added IBL3 closure relations in the form of analytic formulae — shunz / detail
  132. refactored neural net closure implementation — shunz / detail
  133. added a set of IBL3 closure models based on analytic formulae — shunz / detail
  134. restored four-equation neural net closure to its original working state — shunz / detail
  135. switch to using 4-equation IBL3 closure based on analytic formulae.  results are similar or slightly better than neural net closure — shunz / detail
  136. fixed a typo (which fortunately wasn't used yet).  added exception throws — shunz / detail
  137. fixed include filename — shunz / detail
  138. removed redundant exceptions — shunz / detail
  139. refactored four-eqn IBL3 curve-fit closure — shunz / detail
  140. conformed to vera check: should not use "using namespace" in header files — shunz / detail
  141. fixed unit tests for after API refactoring — shunz / detail
  142. fixed unit tests for the  previous API refactoring — shunz / detail
  143. fixed ping tests: finite difference step size — shunz / detail
  144. added ping test for four-eqn IBL3 — shunz / detail
  145. added Blasius flow test case for four-eqn IBL3D. some cleanup — shunz / detail
  146. added include — shunz / detail
  147. added includes — shunz / detail
  148. checked four-eqn IBL3D on Blasius case and stagnation radial flow — shunz / detail
  149. added a stagnation flow toy case.  mucked with IBL3 for torpedo case — shunz / detail
  150. fixed toy case to keep up with API refactoring — shunz / detail
  151. added missing include related to MPI — shunz / detail
  152. suppresed file dump in system test — shunz / detail
  153. added assertions — shunz / detail
  154. add some derivates to the IBL3 output — shunz / detail
  155. relaxed pyrite tolerance — shunz / detail
  156. relaxed pyrite tolerance for intel compiler.  speed up ping test to avoid time-out — shunz / detail
  157. renamed output — shunz / detail
  158. added and refactored IBL3 output — shunz / detail
  159. trying to fix gnu9 compiler warning — shunz / detail
  160. add a new curve fit model based on low-dissipative DBL3 data — shunz / detail
  161. allow for uncoupled/viscou-only IBL3 solution by tweaking the panel method — shunz / detail
  162. forgot to save changes in the last commit... — shunz / detail
  163. relaxed Jenkins timeout threshold for some large ping tests — shunz / detail
  164. minor tweak — shunz / detail
  165. speed up ping test by turning off some redundant sub-block checks — shunz / detail
  166. fix cppcheck error — shunz / detail
  167. speed up ping test by turning off tests on some sub-blocks of the jacobian — shunz / detail
  168. Don't use python2 with jenkins — galbramc / detail

#263 (May 30, 2020, 2:08:52 AM)

  1. instantiation of vectors for 1D Euler — ursachi / detail
  2. added williams sparse quadrature, and tests, and everything seems to be working! — cfrontin / detail
  3. added some stuff — cfrontin / detail
  4. quadrature update. — cfrontin / detail
  5. 1D+T AD adapt case added. — cfrontin / detail
  6. need to fix boundaryoutput for vmsd case im workin on. — cfrontin / detail
  7. updated quadrature and quad testing and also unit tests. — cfrontin / detail
  8. corrected merge error — cfrontin / detail
  9. jenkins fixes — cfrontin / detail
  10. jenkins fixes — cfrontin / detail
  11. Various small fixes for Windoze — galbramc / detail
  12. Fix last commit — galbramc / detail
  13. slight change to quad test, nightly fix. — cfrontin / detail
  14. update, turn off quadrature sandbox for jenkins — cfrontin / detail
  15. update, turn off quadrature sandbox for jenkins 2nd try — cfrontin / detail
  16. Added WriteMesh_ugrid. Add 2D ugrid read/write — galbramc / detail
  17. Fix compile error — galbramc / detail
  18. Properly cleanup ugrid testing files — galbramc / detail
  19. Fix warning — galbramc / detail
  20. Nightly fixes — galbramc / detail
  21. Upgrade AFLR version — galbramc / detail
  22. added 2D moment, pressure drag, and viscous drag outputs — ursachi / detail
  23. added ability to write qpfld restart file — ursachi / detail
  24. created Q1 version of multi-element test case — ursachi / detail
  25. fixes for refine test case — ursachi / detail
  26. slight change to test case — ursachi / detail
  27. 2D VMSDBR2 + RANSSA + AV instantiations — ursachi / detail
  28. missing instantiations and functions for RANSSA + AV — ursachi / detail
  29. Q1 AV test case — ursachi / detail
  30. initial mesh characteristics stuff — ursachi / detail
  31. element counter/finder, for 2D — ursachi / detail
  32. cleaned up file — ursachi / detail
  33. Revert "initial mesh characteristics stuff" — ursachi / detail
  34. added some derived surface quantities — ursachi / detail
  35. fixed formatting issues — ursachi / detail
  36. missed some trailing spaces — ursachi / detail
  37. removed duplicate instantiation — ursachi / detail
  38. fixed a warning — ursachi / detail
  39. Nightly fix — galbramc / detail
  40. Fix to work with Boost 1.73. Replace 'unsinted long' with 'uintptr_t' in triangle — galbramc / detail
  41. fixed another warning — ursachi / detail
  42. Fix formatting — galbramc / detail
  43. Fix linearization bug in VMSDBR2 — galbramc / detail

#262 (May 23, 2020, 1:52:07 AM)

  1. instantiation of vectors for 1D Euler — ursachi / detail
  2. added williams sparse quadrature, and tests, and everything seems to be working! — cfrontin / detail
  3. added some stuff — cfrontin / detail
  4. quadrature update. — cfrontin / detail
  5. 1D+T AD adapt case added. — cfrontin / detail
  6. need to fix boundaryoutput for vmsd case im workin on. — cfrontin / detail
  7. updated quadrature and quad testing and also unit tests. — cfrontin / detail
  8. corrected merge error — cfrontin / detail
  9. jenkins fixes — cfrontin / detail
  10. jenkins fixes — cfrontin / detail
  11. Various small fixes for Windoze — galbramc / detail
  12. Fix last commit — galbramc / detail
  13. slight change to quad test, nightly fix. — cfrontin / detail
  14. update, turn off quadrature sandbox for jenkins — cfrontin / detail
  15. update, turn off quadrature sandbox for jenkins 2nd try — cfrontin / detail
  16. Added WriteMesh_ugrid. Add 2D ugrid read/write — galbramc / detail
  17. Fix compile error — galbramc / detail
  18. Properly cleanup ugrid testing files — galbramc / detail
  19. Fix warning — galbramc / detail
  20. Nightly fixes — galbramc / detail
  21. Upgrade AFLR version — galbramc / detail
  22. added 2D moment, pressure drag, and viscous drag outputs — ursachi / detail
  23. added ability to write qpfld restart file — ursachi / detail
  24. created Q1 version of multi-element test case — ursachi / detail
  25. fixes for refine test case — ursachi / detail
  26. slight change to test case — ursachi / detail
  27. 2D VMSDBR2 + RANSSA + AV instantiations — ursachi / detail
  28. missing instantiations and functions for RANSSA + AV — ursachi / detail
  29. Q1 AV test case — ursachi / detail
  30. initial mesh characteristics stuff — ursachi / detail
  31. element counter/finder, for 2D — ursachi / detail
  32. cleaned up file — ursachi / detail
  33. Revert "initial mesh characteristics stuff" — ursachi / detail
  34. added some derived surface quantities — ursachi / detail
  35. fixed formatting issues — ursachi / detail
  36. missed some trailing spaces — ursachi / detail
  37. removed duplicate instantiation — ursachi / detail
  38. fixed a warning — ursachi / detail
  39. Nightly fix — galbramc / detail
  40. Fix to work with Boost 1.73. Replace 'unsinted long' with 'uintptr_t' in triangle — galbramc / detail
  41. fixed another warning — ursachi / detail
  42. Fix formatting — galbramc / detail

#261 (Apr 17, 2020, 10:14:29 AM)

  1. Added variable interpreter for primary unknowns = {delta*, theta, G} — shunz / detail
  2. Refactored IBL profile type identifier — shunz / detail
  3. Added unit tests to VarInterpret — shunz / detail
  4. Fixed unit test — shunz / detail
  5. Added a new class for calculating thicknesses and coeffcients, along with unit tests. — shunz / detail
  6. Typo fixes — shunz / detail
  7. Refactored PDEIBLUniField to use genealized thicknesses/coeffcients calculation routines.  Verified uncoupled IBL run with airfoil only — shunz / detail
  8. Refactoring to get coupled IBLUniField to work without transition.  Caveat: pyrite check is fine with delta & A variables, but mismatches G (maybe numerical precision issue? to be eamined) — shunz / detail
  9. Cleaned up obsolete stuff — shunz / detail
  10. Cleanup — shunz / detail
  11. Renaming/cleanup — shunz / detail
  12. Preliminary implementation of correlation closure — shunz / detail
  13. Minor refactoring — shunz / detail
  14. First run of correlation-closure IBL on an uncoupled airfoil-only case, compared reasonably well with profile-closure results — shunz / detail
  15. minor edit — shunz / detail
  16. Added turbulent closure from MSES paper.  Ran coupled IBL on airfoil+wake configuration, comparing reasonably well with IBL based on profile closures — shunz / detail
  17. Distinguished H from Hk (kinematic). — shunz / detail
  18. Reduced code repetition — shunz / detail
  19. Added some XFOIL closures — shunz / detail
  20. Added more XFOIL closures — shunz / detail
  21. Typo fixes — shunz / detail
  22. Refactored Uslip calculation — shunz / detail
  23. Fixed a typo in xfoil laminar BL closure — shunz / detail
  24. Added pyrite check for XFOIL laminar BL closure — shunz / detail
  25. Recovered the correct double dissipation for wake.  Added pyrite files — shunz / detail
  26. Added output dumping functions for correlation-closure IBL — shunz / detail
  27. Refactored output function and added a utility function — shunz / detail
  28. Added XFOIL amplification growth rate closure, which is almost identical to IBL — shunz / detail
  29. Modified lag equation and CDiss closure a bit. — shunz / detail
  30. With modified lag equation, laminarBL+turbulentWake results matches XFOIL very closely — shunz / detail
  31. Added captured transition test case with pyrite file for correlation-based IBL — shunz / detail
  32. Fixed an innocuous bug — shunz / detail
  33. Re-enabled LF flux — shunz / detail
  34. Added machinery for loading up IBL solution from input file — shunz / detail
  35. Make LF flux a default for IBL — shunz / detail
  36. Refactored blended intermittency calculation for correlation-based closure — shunz / detail
  37. Do no apply blending for wake — shunz / detail
  38. Switched to generalized thickness/coeffcient calculation for duplicate-field IBL as well.  Verified uncoupled airfoil case with full upwind — shunz / detail
  39. Bug fix — shunz / detail
  40. Verified coupled case with laminarBL+turbulentWake — shunz / detail
  41. Minor refactoring — shunz / detail
  42. minor cleanup — shunz / detail
  43. Added instantiation and fixed transition test cases — shunz / detail
  44. Added a missing method — shunz / detail
  45. Added a pyrite check for NACA0012 case (with flow separation) — shunz / detail
  46. Added a different set of initial solution.  Allowed for laminar BL to turn turbulent during transient state — shunz / detail
  47. Added new IBL variable type — shunz / detail
  48. Added unit tests and fixed bugs — shunz / detail
  49. Generalized dummy equations in duplicate-field IBL pde class — shunz / detail
  50. Follow-up fixes for test cases affected by earlier commits — shunz / detail
  51. Refactored solution initialization — shunz / detail
  52. Enabled correlation-based two-field IBL formulation.  Added test case of coupled IBL with lamiBL+turbWake and corresponding pyrite file. — shunz / detail
  53. Refactored updateFraction in PDEIBL and also fixed the sign in solution update — shunz / detail
  54. Generalized cut-cell machinery to handle two different sets of IBL primary unknowns — shunz / detail
  55. Added pyrite check — shunz / detail
  56. Added comments — shunz / detail
  57. Minor refactoring.  Added missing initial solution file — shunz / detail
  58. Intermediate commit — shunz / detail
  59. Cleaned up test cases — shunz / detail
  60. Refactored updateFraction — shunz / detail
  61. Added a pyrite check — shunz / detail
  62. Relaxed tolerance — shunz / detail
  63. Refactoring updateFraction.  Added an expedient guard against too small Hk — shunz / detail
  64. Added underrelaxation — shunz / detail
  65. Added underrelaxation-related stuff — shunz / detail
  66. Cosmetic edtis — shunz / detail
  67. Verified pyrite check for fitted-transition IBL on NACA0012 Re=1e5 massively separated laminar BL — shunz / detail
  68. Added Cf replacement for turbulent BL with too small Retheta — shunz / detail
  69. Added a pyrite file — shunz / detail
  70. Added a pyrite file — shunz / detail
  71. BC refactoring and unit test fix — shunz / detail
  72. Refactored BC and added unit tests — shunz / detail
  73. Improved coverage by removing redundant safety guards — shunz / detail
  74. Just renaming — shunz / detail
  75. Refactoring and unit testing — shunz / detail
  76. Fixed a bug in Cf correlation.  Added unit test — shunz / detail
  77. Type fix — shunz / detail
  78. Unit tested correlations from XFOIL. — shunz / detail
  79. Refactored amplification growth correlation calculation for speedup --> changed the floating-point arithmetic a bit  Added unit tests. — shunz / detail
  80. added comments — shunz / detail
  81. Cleanup — shunz / detail
  82. Cleanup — shunz / detail
  83. Dump additional output files for examination — shunz / detail
  84. Unit test fixes — shunz / detail
  85. More unit test fixes — shunz / detail
  86. Unit test fix — shunz / detail
  87. Refactored blended intermittency calculation and added unit tests — shunz / detail
  88. Refactored updateFraction and added unit tests — shunz / detail
  89. minor fixes — shunz / detail
  90. matching old system pyrite test: coupled IBLUniField profile-closure lamiBL+turbWake — shunz / detail
  91. Changed initial solution guess — shunz / detail
  92. Bug fix.  Equality operator is sensitive to type: std::string vs its reference. — shunz / detail
  93. Minor refactoring — shunz / detail
  94. Added comments — shunz / detail
  95. Refactored unit tests — shunz / detail
  96. Refactored source terms and added unit tests for PDEIBL2D — shunz / detail
  97. Refactored ctau_{turb,init}.  Unit tested turbulent sub-cell source term for amplification eqn in cut-cell transition formulation — shunz / detail
  98. Fix for vera formatting check.  Also a minor refactoring — shunz / detail
  99. Minor refactoring — shunz / detail
  100. Refactored ctau_{turb,init} fitting calculation — shunz / detail
  101. Forgot to save  this in the last commit... — shunz / detail
  102. Unit-tested upwind advective flux in two-fIeld IBL pde class — shunz / detail
  103. Minor commenting — shunz / detail
  104. Minor refactoring — shunz / detail
  105. minor refactoring — shunz / detail
  106. Refactored dummy matching equations for fitted transition — shunz / detail
  107. Forgot to commit this in the last pass — shunz / detail
  108. Modified artificial amplification source term in fully turbulent elements.  Pluse other minor refactoring — shunz / detail
  109. Make sure scales are non-negative — shunz / detail
  110. Enabled G=ln(ctau^0.5) as a primary unknown in place of ctau.  It helps with nonlinear solution. — shunz / detail
  111. Fixed unit tests — shunz / detail
  112. Dumping matching variables for transition — shunz / detail
  113. Refactored underrelaxation to guard against zero G.  Added forced-transition subiteration output dump — shunz / detail
  114. Turned off limiting on G variable.  Made H validity check tighter — shunz / detail
  115. Playing with a different form of lag equation in fitted transition approach.  Not much luck though.  So, as of now, using G as the primary unknown is already helpful — shunz / detail
  116. Playing with point source for setting ctau_{Turb,init} — shunz / detail
  117. Refactored forced transition point source for ctau jump — shunz / detail
  118. playing with point source for ctau jump in free transition — shunz / detail
  119. Tried implementing ctau jump condition via flux modification — shunz / detail
  120. Got a captured transition result with sharp ctau jump at free transition front — shunz / detail
  121. Added explicit instantiation — shunz / detail
  122. Genearalized HubTrace boundary trace integrand by ridding of any PDE/BC dependence — shunz / detail
  123. Generalized IBL solution DOF setter — shunz / detail
  124. Implemented a different formulation for captured transition by splitting the amplification and lag equations — shunz / detail
  125. Added instantiations — shunz / detail
  126. Fixed amplification and lag source terms in new IBL PDE class — shunz / detail
  127. Verified NACA0012 Re1e5 results against XFOIL (separated fully laminar BL) — shunz / detail
  128. Add a lower limit to the modeled turbulent initial ctau — shunz / detail
  129. Minor refactoring — shunz / detail
  130. Fixed a bug in solution initialization — shunz / detail
  131. Refactored masterState calculation from cumulation to assignment — shunz / detail
  132. minor tidying — shunz / detail
  133. Refactored smooth intermittency blending to allow for natural and forced transition as the same time — shunz / detail
  134. Allowed for initializing p0 IBL solution from input file — shunz / detail
  135. Added H upper limit in validity check — shunz / detail
  136. SplitAmpLag working on NACA0012 Re 2e5 separation bubble — shunz / detail
  137. Cosmetic edit — shunz / detail
  138. Decoupled nt variables of BL from nt of the wake — shunz / detail
  139. Converged p=0 solution on ne64 and n128 grids for Eppler 387 case — shunz / detail
  140. minor cleanup — shunz / detail
  141. renaming — shunz / detail
  142. Refactored state validity check — shunz / detail
  143. minor refactoring — shunz / detail
  144. Added IO files for testing Eppler 387 airfoil — shunz / detail
  145. Typo fix — shunz / detail
  146. Tried PTC for IBLSplitAmpLag captured transition case — shunz / detail
  147. Further simplified amplification equation at hubtrace — shunz / detail
  148. Added grid and initial solution files — shunz / detail
  149. minor cleanup — shunz / detail
  150. added hessian to Joukowski solution — allmaras / detail
  151. bug fix in Joukowski test — allmaras / detail
  152. Minor edit — shunz / detail
  153. Refactored a case — shunz / detail
  154. Fixed calls to jacobianTranspose of daisy-chained algebraic equation set — shunz / detail
  155. Cleanup — shunz / detail
  156. minor refactoring — shunz / detail
  157. minor edit to running case — shunz / detail
  158. Refactored printed normed reisudals when line-search fails. — shunz / detail
  159. Refactored running case — shunz / detail
  160. Minor cleanup — shunz / detail
  161. Minor fix — shunz / detail
  162. Refactored uncoupled IBL case and added pyrite file — shunz / detail
  163. Fixed HDG continuous implementation.  Reverted to Var(delta, A, G) to not hacking scaling delta and A.  Cleaned up some system tests — shunz / detail
  164. Refactored two test cases — shunz / detail
  165. Added Hk lower limit check when checking state validity for IBLUniField with correlation closures — shunz / detail
  166. Added pyrite check file.  Refactored test cases and enabled PTC on one of them. — shunz / detail
  167. Fix pyrite check — shunz / detail
  168. Fixed undefined variables — shunz / detail
  169. Updated a pyrite file to be consistent with the latest settings in IBLUniField — shunz / detail
  170. Deleted a redundant case — shunz / detail
  171. added some commented out hack for fully turbulent BL simulation with IBLUniField — shunz / detail
  172. Updated pyrite file — shunz / detail
  173. Added exceptions as safe guards — shunz / detail
  174. cosmetic refactoring — shunz / detail
  175. cosmetic refactoring — shunz / detail
  176. Added a pyrite file and changed test file name — shunz / detail
  177. turned on set IBL dofs for p=0 for DsThG — shunz / detail
  178. Dumped singular jacobian when UMFPACK finds it — shunz / detail
  179. Refactored system test cases — shunz / detail
  180. Using a less conservative initial CFL for PTC in a test case — shunz / detail
  181. Refactored system test case — shunz / detail
  182. Added some auxiliary functions for system test cases — shunz / detail
  183. Added some debugging options — shunz / detail
  184. Minor refactoring — shunz / detail
  185. Simplified upwind flux in IBL to improve code reuse — shunz / detail
  186. Commented out hacks.  Added minor guards.  Dumped matrix when UMFPACK linear solve fails. — shunz / detail
  187. Laminar-turbulent blending works for Eppler 387 now.  Turned on G limiting in updateFraction — shunz / detail
  188. Cleaned up and refactored projection to Qauxi — shunz / detail
  189. Removed redundant TopoDim templates following Hugh's recent updates — shunz / detail
  190. playing with numerical flux and nt growth rate in laminar-turbulent blending formulation — shunz / detail
  191. Playing with various grid-dependent laminar-turbulent blending strategies — shunz / detail
  192. minor cleanup — shunz / detail
  193. Use value instead of reference since equivalence is checked instead of identity — shunz / detail
  194. Added output — shunz / detail
  195. Tweaked LF flux dissipation coefficient a bit.  Modified lag source term to prevent ctau to drop with ctau_Tinit after reaching its peak.  Hacking grid dependent blending.  Left system test case unchecked for the moment — shunz / detail
  196. Added Hs derivatives with unit tests.  Fixed typos in closure unit tests — shunz / detail
  197. Abstracted Re_theta calculation — shunz / detail
  198. Added Roe flux based on arithmetic average state — shunz / detail
  199. Added class for setting qaux field from file — shunz / detail
  200. Typo fix — shunz / detail
  201. Minor refactoring — shunz / detail
  202. Output blended IBL quantities — shunz / detail
  203. Added an uncoupled IBL case — shunz / detail
  204. Added qinif initialization to a shared file for setting up IBL case — shunz / detail
  205. Using qinf initialization from a shared file — shunz / detail
  206. Refactored Roe flux for IBL — shunz / detail
  207. Added entropy fix — shunz / detail
  208. Just hacking around.  The hacky stuff are turned off — shunz / detail
  209. Reformulated DG-IBL interface flux and finally fixed solution oscillation in transition cases.  Saved other miscellaneous updates — shunz / detail
  210. cosmetic changes (with hacks being commented out) — shunz / detail
  211. Normalize KE equation by q^2 — shunz / detail
  212. editted comments — shunz / detail
  213. Use pde fluxAdvective function to calculate outflow flux at Hubtrace boundary — shunz / detail
  214. cleaned up some hacks — shunz / detail
  215. minor cleanup — shunz / detail
  216. Accidentally messed up blended source term.  Restore it now. — shunz / detail
  217. Stashed some intermediate edits — shunz / detail
  218. Fixed the numerical flux of IBL momentum equations to eliminate solution jumps and/or oscillations.  Also cleaned up temporary hacks. — shunz / detail
  219. Make intermittency length scale a parameter in the transition model.  Cleaned up old hacks in in PDEIBLSplitAmpLag2D — shunz / detail
  220. More cleanup — shunz / detail
  221. minor edits — shunz / detail
  222. Disable search for boost-cmake; otherwise, runs into conflicts with FindBoost.  Need to resolve this if using boost-cmake in the future — shunz / detail
  223. Minor cleanup following last merge commit — shunz / detail
  224. Minor fixes to keep up with changes in the main branch — shunz / detail
  225. Add pyrite check on E387 airfoil transition separation bubble case — shunz / detail
  226. Update Solve2D_Coupled4x4_IBLSplitAmpLag_CorrelationClosure_CapturedTransition_PTC_btest.cpp — shunz / detail
  227. Cleaned up the numerical flux options in Qauxi projection.  All three numerical fluxes produce similar well-behaved results.  Add a sandbox case — shunz / detail
  228. working on advective field case... — cfrontin / detail
  229. asdfasdf — cfrontin / detail
  230. working on the advective field and it's broken LOL — cfrontin / detail
  231. fix mpi dg — cfrontin / detail
  232. trying to figure out idiosyncracy — cfrontin / detail
  233. cont'd — cfrontin / detail
  234. cont'd pt. ii — cfrontin / detail
  235. name fix — cfrontin / detail
  236. oopsie — cfrontin / detail
  237. working on random field — cfrontin / detail
  238. updated random fields, should be working but untested. — cfrontin / detail
  239. unit tests for adjoint — arthuang / detail
  240. fixes to compute AR etc. — hcarson / detail
  241. Fix for EPIC 2D without geometry — galbramc / detail
  242. jenkins fix, holdover code. — cfrontin / detail
  243. adding block pivoting to ilu — arthuang / detail
  244. a VMSDBR2 version of the DeltaWing Chain toy — hcarson / detail
  245. Enable static condensation with MKL — galbramc / detail
  246. Missed a static condensation step — galbramc / detail
  247. Another MKL static condensation fix — galbramc / detail
  248. Relaxed tolerance — galbramc / detail
  249. a VMSDBR2 Double BL, also lining up the 3 so that they are the same. HOWEVER, Seems to be something very wrong with plain VMSD, the adapt looks crap and the error is enormous.... — hcarson / detail
  250. Updates for latest refine — galbramc / detail
  251. urop fix? — cfrontin / detail
  252. jenkins fix, odds and ends. — cfrontin / detail
  253. added 2D+T VMSD AD case. — cfrontin / detail
  254. minor edit — shunz / detail
  255. refactored the new PDE IBL class and added unit tests — shunz / detail
  256. fixed LF flux — shunz / detail
  257. Relocated blended intermittency to PDE class.  Added unit tests. — shunz / detail
  258. Added unit tests to VarInterpret — shunz / detail
  259. Fixed intermittency usage in auxi equation — shunz / detail
  260. refactored intermittency calculation calling signature across different variants of IBL formulations — shunz / detail
  261. Fixed type — shunz / detail
  262. Refactored unit tests to keep up with updates in the thickness class — shunz / detail
  263. Cleaned up manifold interface integrand implementation.  Minor type corrections for unit tests involving Surreal types. — shunz / detail
  264. Fixed ping tests by adjusting the reference solution and step size — shunz / detail
  265. Refactored  PDEIBLSplitAmgLag2D default flux and ctau_min.  Added pyrite check files — shunz / detail
  266. updated pyrite files — shunz / detail
  267. Refactored IBL solution file reader.  Cleaned up system tests for various IBL formulations — shunz / detail
  268. Removed IO file clutter — shunz / detail
  269. Added variable data constructors.  Fixed types.  File cleanup — shunz / detail
  270. Fixed IBL solution reader usage — shunz / detail
  271. Recovered a system test on IBLUniField — shunz / detail
  272. Cleaned up system tests — shunz / detail
  273. Fixed IBL solution reader usage — shunz / detail
  274. Fixed duplicate symbols by inline.  Added a missing pyrite check file — shunz / detail
  275. Relaxed pyrite tolerance.  Fixed unit tests for IBL soluton file reader — shunz / detail
  276. Suppressed file output for Jenkins — shunz / detail
  277. Suppressed one more file output for Jenkins. — shunz / detail
  278. Fixed unused variable — shunz / detail
  279. Relaxed pyrite tolerances for gnu — shunz / detail
  280. Subtle typo in pyrite filename — shunz / detail
  281. Relaxed tolerances for intel compilers — shunz / detail
  282. Relaxed pyrite tolerance.  Added explicit instantiation to fix linker error — shunz / detail
  283. Relaxed tolerance. Fixed timeout on Jenkins — shunz / detail
  284. Relaxed pyrite tolerances — shunz / detail
  285. relaxed tolerance on d/dxdy test — allmaras / detail
  286. Replace Joukowski q1 grid — galbramc / detail
  287. coverage improvement — cfrontin / detail
  288. hotfix — cfrontin / detail
  289. quick fix — cfrontin / detail
  290. Attempt to use parallel MKL (does not work yet). Other small cleanups. — galbramc / detail
  291. Added cartesian table lookup for PorusMedia SPE calculations — galbramc / detail
  292. Use atlas blas on rhel7 — galbramc / detail
  293. 2d+t hex solve patch. — cfrontin / detail
  294. belated nomenclature fix — cfrontin / detail
  295. Consistent delete — galbramc / detail
  296. VMSDBR2 3D+T additions. — cfrontin / detail
  297. added squarechannel vmsd br2 changes — cfrontin / detail
  298. General PETSc verson on macOZ for jenkins — galbramc / detail
  299. Suppress tetgen CMake warning. Relax tolerance for macOS — galbramc / detail
  300. Allow MKL as BLAS library. Update macOS PETSc. Fix tolerance. — galbramc / detail
  301. Add option to dump per rank matrix market file from PETSc — galbramc / detail
  302. 1st crack at SPE10 test case; compiles but errors out when run; — allmaras / detail
  303. unit tests for PorosityModel_CartTable — allmaras / detail
  304. unit tests for Porosivity and Permeability — allmaras / detail
  305. Fix for PETSc matrix market dump — galbramc / detail
  306. bug fixes in 2-phase porous flow classes/tests; added CartTable unit tests for PDETwoPhase2D — allmaras / detail
  307. updated SPE10 test case to include lookup poro/perm tables; BCs now complaining about CartTable — allmaras / detail
  308. reverted to original functionality on fluxAdvectiveUpwind: no-op rather than developer exception; — allmaras / detail
  309. added "#include <fstream>" in lookup table tests — allmaras / detail
  310. SPE10 testcase: added avro include files and check on SANS_AVRO — allmaras / detail
  311. cppcheck fixes — galbramc / detail
  312. Jenkins updates — galbramc / detail
  313. Added Kyle Anderson k-ordering to PETSc — galbramc / detail
  314. Another jenkins update — galbramc / detail
  315. Fix warnings — galbramc / detail
  316. vmsd sip -> vmsd br2 in sandbox — cfrontin / detail
  317. Update CMake build to Nlopt 2.6.1 — galbramc / detail
  318. SPE10 testcase: added needed instantiations for BC parameters, algebraic eq set, error estimates — allmaras / detail
  319. more vmsd sip -> vmsd br2 in sandbox — cfrontin / detail
  320. Fix k-ordering — galbramc / detail
  321. Fix for k-ordering with BAIJ PETSc matrices — galbramc / detail
  322. fixed typo in comments; no change in functionality — allmaras / detail
  323. SPE10 testcase: fixed typos/bugs in instantiations — allmaras / detail
  324. SPE10: changed avro check to BOOST_FAIL, so code always compiles even if USE_AVRO not defined — allmaras / detail
  325. Implemented refine 2D API interface — galbramc / detail
  326. SPE10: generalized output functional to sum over a vector of outflow wells — allmaras / detail
  327. SPE10: added multiple wells to output functional — allmaras / detail
  328. SPE10: trying to achieve successful compile when SANS_AVRO not defined — allmaras / detail
  329. SPE10: added checks on porosity & permeability table lookups — allmaras / detail
  330. Upgrade ccache version — galbramc / detail
  331. vmsd -> sip again — cfrontin / detail
  332. 2D refine updates to swork with CAD. Not done yet. — galbramc / detail
  333. Fix compile error — galbramc / detail
  334. Suppress some cppcheck warnings — galbramc / detail
  335. Tweak for jenkins Commit script — galbramc / detail
  336. less sharp exact soln, BR2 not SIP — cfrontin / detail
  337. and output fix — cfrontin / detail
  338. eliminated option to use single/scalar source to initialize OutputTwoPhase2D_Flowrate; — allmaras / detail
  339. added test for 1x1 constant lookup table — allmaras / detail
  340. typo fix in output functional source class name (SourceClass -> SourceOutflowClass) — allmaras / detail
  341. another intel suppression for valgrind — galbramc / detail
  342. cppcheck suppression — galbramc / detail
  343. Added a scaling factor to PermeabilityModel2D_CartTable to fix units in SPE10 case. Added rock compressibility to PorosityModel_CartTable, and updated unit tests. Added phi, Kxx, and Kyy as derived quantities to PDETwoPhase2D for visualization. Added table look-up files with homogeneous data for SPE10. — savithru / detail
  344. Fixed unused variable warning — savithru / detail
  345. forcing function adjustment... not improved :( — cfrontin / detail
  346. Update for latest refine — galbramc / detail
  347. SingularException destructor instantiation — galbramc / detail
  348. Rename BCEulermitAVDiffusion to BCEulermitAVSensor since the name makes more sense — blsc / detail
  349. First pass at including artificial viscosity model from Holst (2020) — blsc / detail
  350. GCC9 caught some unitialized data — blsc / detail
  351. A few bugs — blsc / detail
  352. Unit tests and associated bug fixes — blsc / detail
  353. Fix library ordering for HSM — galbramc / detail
  354. Updated gcc warning regex — galbramc / detail
  355. Increase timout times — galbramc / detail
  356. Slight correction to refine unit test — galbramc / detail
  357. Updates for refine incliding 2D triangle hack. Still need help from Mike. — galbramc / detail
  358. Dissable refine 2D test — galbramc / detail
  359. Refine now works in 2D — galbramc / detail
  360. Add restart interface for refine — galbramc / detail
  361. Increase timeour for refine2D tests — galbramc / detail
  362. Use MPI_sleep for avro execution — galbramc / detail
  363. Only write EGADS file from one processor and reduce iterations in refine2D_btest — galbramc / detail
  364. Add missing include — galbramc / detail
  365. Relax refine timie a bit more — galbramc / detail
  366. Add missing link library — galbramc / detail
  367. refine2D with EGADS still does not quite work. — galbramc / detail
  368. Fix for parallel 2D refine — galbramc / detail
  369. One more refine fix — galbramc / detail
  370. Only remove files on the rank 0 processor — galbramc / detail
  371. Warning fixes — galbramc / detail
  372. Fix up Box Tet WakeCut for adjoint — galbramc / detail
  373. Added Ismail-Roe entropy conservative flux (with optional entropy fix based on Harten) in 2D. Unit tested to ensure: primal and entropy consistency for the entropy conservative formulation, primal consistency and entropy dissipation for version with entropy fix. Extension to RANSSA NOT implemented. — blsc / detail
  374. Added header: src/pde/NS/Roe.h to src/pde/NS/IsmailRoe.h to it can access datatype: RoeEntropyFix — blsc / detail
  375. Typo fix in enum RoeEntropyFix: eIsmailRoeEntopyNeutral -> eIsmailRoeEntropyNeutral — blsc / detail
  376. Added SPE10 permeability datasets with reduced contrast ratios — savithru / detail
  377. Updated quarter five spot case to use avro — savithru / detail
  378. lorenz building, not converging. need unit tests. — blsc / detail
  379. in progress... — blsc / detail
  380. lorenz in progress, not converging, seems to need stabilization. — blsc / detail
  381. working on vmsd. — blsc / detail
  382. added DG, broken. now VMSD and DGBR2 are both broken and CG is unstable :) — blsc / detail
  383. more of the same. — blsc / detail
  384. made some fixes, fem of lorenz seems to be working (w/ 4M elements...) — blsc / detail
  385. trying to figure out what's wrong — blsc / detail
  386. unit test addition.. — blsc / detail
  387. hmm looking for valgrid shit now. — blsc / detail
  388. added exact solution for alpha=0 case. — blsc / detail
  389. configured for convergence test, convergent. — blsc / detail
  390. output tricks — blsc / detail
  391. working on homotopy pde — blsc / detail
  392. for marshall — blsc / detail
  393. Some progress for BCHomotopy — blsc / detail
  394. homotopy in progress (still) — blsc / detail
  395. on the way to a block 2x2 version of htc... — blsc / detail
  396. slow but steady. — blsc / detail
  397. on the curve between the easy solution and the hard one — blsc / detail
  398. bob loblaw law blog — blsc / detail
  399. homotopy might be working might be leaking might be a figment of my imagination. — blsc / detail
  400. fieldbase uninitialized data fix. — blsc / detail
  401. homotopy running but breaking for chaos :( — blsc / detail
  402. added dumps — blsc / detail
  403. fixed homotopy bug i think. — blsc / detail
  404. added adaptive stepping to homotopy. — blsc / detail
  405. ready for ben — blsc / detail
  406. state of the art — blsc / detail
  407. small changes. — blsc / detail
  408. Removed PDE template from BCLorenz since it was no longer needed. Generalized the new homotopy integrand so it can be applied to Real and VectorS PDE::ArrayQ types. Updates required adding move construction and move assignment operator to VectorBlock_2 to prevent warnings about using implicit constructors under g++9. Propogated the required changes to unit test and sandbox cases. — blsc / detail
  409. Statically condensed VMSD with homotopy: Updated the jacobian functions in the the HTC algebraic equation set, added logic for static condensation to Block 2x2 matrix interface with UMFPACK, and also had to expose the types of the vectors in VectorBlock_2. Also updated the Homotopy logic to be more robust, which mostly consists of making sure steps taken in the predictor phase are valid. — blsc / detail
  410. Added ability to pass q and qp into source term individually for VMSDBR2. This is needed for some of the resolution sensors I am experimenting with for shock capturing. This required an additional source function to be added to PDEs that takes q, qp, gradq, and gradqp. Currently, this new function forwards (q+qp) and (gradq+gradqp) to the original source function. Unit tests have been added to test consistency of this new source term. — blsc / detail
  411. Added new boundary condition: BCTypeFullStateRadialInflow_mitState. This is a FullState_mitState style boundary condition, except velocity magnitude is specified. The direction is then calculated as radially outward from an origin at (0,0). — blsc / detail
  412. Added PDESourceOnly2D which implements a pde q - a = 0. This is for use as the auxiliary equation for Homotopy continuation. Unit tests added to applying this PDE to adevction diffusion, Euler and Euler with artificial diffusion. Also found that the jacobianMasterState and jacobianFluxAdvectveTime functions were reversed for the sensor PDE. This has been fixed and unit tests updated. — blsc / detail
  413. Setting up a bump in a subsonic inviscid flow. Now verbose enables / disables all console output of the halving linesearch. Also added some extra function to PDEEuler2D to forward calls that have params. — blsc / detail
  414. Added sourceCoarse and sourceFine function calls to VMSDBR2, which are source terms weighted against the coarse and fine space test functions respectively. For the most part these forward calls to the source function in the PDE. These are required because VMSD does not have a unique solution for the PDE q - a = 0 if a is a constant. Since this is the case in the SourceOnly PDE, that PDE now solves (\bar{q} - a) = 0, and q' = 0. — blsc / detail
  415. Setting up RadialShock problem using VMSDBR2 and Homotopy. This required instantiating objects relating to the Block 2x2 linear algebra for PDEs of dimension 5. It also required adding the new source functions to the Sensor PDE. — blsc / detail
  416. Renamed eLaplaceViscosity to eLaplaceViscosityEnthalpy in enum EulerArtViscosity. This is a more descriptive name for this option: artificial diffusion is applied to the gradient of total enthalpy (not total internal energy as a pure Laplacian operator would suggest). Now the option eLaplaceViscosityEnergy can be added to the enum EulerArtViscosity to describe the artificial diffusion being applied to the conservation variables. — blsc / detail
  417. Upgraded to latest AFLR — galbramc / detail
  418. Added eLaplaceViscosityEnergy to enum EulerArtViscosity. This applies a Laplacian operator to the conservation variable gradient (i.e. energy gradient not enthalpy gradient). System tests have been added to ensure that the calculation is correct for Euler2D and RANSSA2D PDEs. — blsc / detail
  419. Fixed two bugs highlighted by Jenkins. 1) PDELorenz was using abs on a Real. 2) Several lines in SolutionFunction_Euler2D.h were too long. — blsc / detail
  420. Look for Real Time library for AFLR — galbramc / detail
  421. Fix for last commit — galbramc / detail
  422. A few AFLR fixes — galbramc / detail
  423. Previous commits overwrote some updates to the PETSc interface, so had to revert to commit 8fa5bcb008f4c19ec223d6ebfa628f6d4d9354cd for those files. Also updated files that failed vera checks. — blsc / detail
  424. Instantiations for Block2x2 systems for a PDE of 5 equations were missing from MKL. Also, the version of UMFPack on Ubuntu 12.04 does not support the new exception types, so have reverted src/LinearAlgebra/SparseLinAlg/Direct/UMFPACK/UMFPACKSolver.cpp back to commit 45d3cd53036a51bccf943d9c5097544bd220d8f8 — blsc / detail
  425. Relaxed tolerances on JacobianCell_VMSD_BR2_AD_btest for intel. Added #ifdef protection on the new UMFPACk error flags for older versions of UMFPack (pre 5.5) — blsc / detail
  426. Updated BuildBoost to Boost 1.72 — galbramc / detail
  427. Updated AFLR to 16.30.11. Lots of cppcheck fixes. — galbramc / detail
  428. Add missing include — galbramc / detail
  429. Fixes for AFLR4 farfield mesh generation — galbramc / detail
  430. A few nightly fixes — galbramc / detail
  431. Add continuousGlobalMap for LIP solvers — galbramc / detail
  432. Fix the last fix — galbramc / detail
  433. Use CMake python when building boost — galbramc / detail
  434. Fix for gold linker with MKL — galbramc / detail
  435. Some more nightly fixes — galbramc / detail
  436. One more nightly fix — galbramc / detail
  437. CMake fixes for CentOS 8 — galbramc / detail
  438. Relax timing some more — galbramc / detail
  439. Correction for finding boost python — galbramc / detail
  440. Some more time relaxation — galbramc / detail
  441. Look for vera++ on CentOS 8 as well — galbramc / detail
  442. speed up a system test by using a better initial solution — shunz / detail
  443. Boost numpy was added with 1.65 — galbramc / detail
  444. remove some system tests that are no longer essential — shunz / detail
  445. remove more non-essential system test — shunz / detail
  446. remove more non-essential system test — shunz / detail
  447. Check if NLOPT direcfory exists on jenkins node — galbramc / detail
  448. Fix array out of bounds for refine. Fix parallel make for jenkins. — galbramc / detail

#260 (Apr 16, 2020, 8:54:53 PM)

  1. Added variable interpreter for primary unknowns = {delta*, theta, G} — shunz / detail
  2. Refactored IBL profile type identifier — shunz / detail
  3. Added unit tests to VarInterpret — shunz / detail
  4. Fixed unit test — shunz / detail
  5. Added a new class for calculating thicknesses and coeffcients, along with unit tests. — shunz / detail
  6. Typo fixes — shunz / detail
  7. Refactored PDEIBLUniField to use genealized thicknesses/coeffcients calculation routines.  Verified uncoupled IBL run with airfoil only — shunz / detail
  8. Refactoring to get coupled IBLUniField to work without transition.  Caveat: pyrite check is fine with delta & A variables, but mismatches G (maybe numerical precision issue? to be eamined) — shunz / detail
  9. Cleaned up obsolete stuff — shunz / detail
  10. Cleanup — shunz / detail
  11. Renaming/cleanup — shunz / detail
  12. Preliminary implementation of correlation closure — shunz / detail
  13. Minor refactoring — shunz / detail
  14. First run of correlation-closure IBL on an uncoupled airfoil-only case, compared reasonably well with profile-closure results — shunz / detail
  15. minor edit — shunz / detail
  16. Added turbulent closure from MSES paper.  Ran coupled IBL on airfoil+wake configuration, comparing reasonably well with IBL based on profile closures — shunz / detail
  17. Distinguished H from Hk (kinematic). — shunz / detail
  18. Reduced code repetition — shunz / detail
  19. Added some XFOIL closures — shunz / detail
  20. Added more XFOIL closures — shunz / detail
  21. Typo fixes — shunz / detail
  22. Refactored Uslip calculation — shunz / detail
  23. Fixed a typo in xfoil laminar BL closure — shunz / detail
  24. Added pyrite check for XFOIL laminar BL closure — shunz / detail
  25. Recovered the correct double dissipation for wake.  Added pyrite files — shunz / detail
  26. Added output dumping functions for correlation-closure IBL — shunz / detail
  27. Refactored output function and added a utility function — shunz / detail
  28. Added XFOIL amplification growth rate closure, which is almost identical to IBL — shunz / detail
  29. Modified lag equation and CDiss closure a bit. — shunz / detail
  30. With modified lag equation, laminarBL+turbulentWake results matches XFOIL very closely — shunz / detail
  31. Added captured transition test case with pyrite file for correlation-based IBL — shunz / detail
  32. Fixed an innocuous bug — shunz / detail
  33. Re-enabled LF flux — shunz / detail
  34. Added machinery for loading up IBL solution from input file — shunz / detail
  35. Make LF flux a default for IBL — shunz / detail
  36. Refactored blended intermittency calculation for correlation-based closure — shunz / detail
  37. Do no apply blending for wake — shunz / detail
  38. Switched to generalized thickness/coeffcient calculation for duplicate-field IBL as well.  Verified uncoupled airfoil case with full upwind — shunz / detail
  39. Bug fix — shunz / detail
  40. Verified coupled case with laminarBL+turbulentWake — shunz / detail
  41. Minor refactoring — shunz / detail
  42. minor cleanup — shunz / detail
  43. Added instantiation and fixed transition test cases — shunz / detail
  44. Added a missing method — shunz / detail
  45. Added a pyrite check for NACA0012 case (with flow separation) — shunz / detail
  46. Added a different set of initial solution.  Allowed for laminar BL to turn turbulent during transient state — shunz / detail
  47. Added new IBL variable type — shunz / detail
  48. Added unit tests and fixed bugs — shunz / detail
  49. Generalized dummy equations in duplicate-field IBL pde class — shunz / detail
  50. Follow-up fixes for test cases affected by earlier commits — shunz / detail
  51. Refactored solution initialization — shunz / detail
  52. Enabled correlation-based two-field IBL formulation.  Added test case of coupled IBL with lamiBL+turbWake and corresponding pyrite file. — shunz / detail
  53. Refactored updateFraction in PDEIBL and also fixed the sign in solution update — shunz / detail
  54. Generalized cut-cell machinery to handle two different sets of IBL primary unknowns — shunz / detail
  55. Added pyrite check — shunz / detail
  56. Added comments — shunz / detail
  57. Minor refactoring.  Added missing initial solution file — shunz / detail
  58. Intermediate commit — shunz / detail
  59. Cleaned up test cases — shunz / detail
  60. Refactored updateFraction — shunz / detail
  61. Added a pyrite check — shunz / detail
  62. Relaxed tolerance — shunz / detail
  63. Refactoring updateFraction.  Added an expedient guard against too small Hk — shunz / detail
  64. Added underrelaxation — shunz / detail
  65. Added underrelaxation-related stuff — shunz / detail
  66. Cosmetic edtis — shunz / detail
  67. Verified pyrite check for fitted-transition IBL on NACA0012 Re=1e5 massively separated laminar BL — shunz / detail
  68. Added Cf replacement for turbulent BL with too small Retheta — shunz / detail
  69. Added a pyrite file — shunz / detail
  70. Added a pyrite file — shunz / detail
  71. BC refactoring and unit test fix — shunz / detail
  72. Refactored BC and added unit tests — shunz / detail
  73. Improved coverage by removing redundant safety guards — shunz / detail
  74. Just renaming — shunz / detail
  75. Refactoring and unit testing — shunz / detail
  76. Fixed a bug in Cf correlation.  Added unit test — shunz / detail
  77. Type fix — shunz / detail
  78. Unit tested correlations from XFOIL. — shunz / detail
  79. Refactored amplification growth correlation calculation for speedup --> changed the floating-point arithmetic a bit  Added unit tests. — shunz / detail
  80. added comments — shunz / detail
  81. Cleanup — shunz / detail
  82. Cleanup — shunz / detail
  83. Dump additional output files for examination — shunz / detail
  84. Unit test fixes — shunz / detail
  85. More unit test fixes — shunz / detail
  86. Unit test fix — shunz / detail
  87. Refactored blended intermittency calculation and added unit tests — shunz / detail
  88. Refactored updateFraction and added unit tests — shunz / detail
  89. minor fixes — shunz / detail
  90. matching old system pyrite test: coupled IBLUniField profile-closure lamiBL+turbWake — shunz / detail
  91. Changed initial solution guess — shunz / detail
  92. Bug fix.  Equality operator is sensitive to type: std::string vs its reference. — shunz / detail
  93. Minor refactoring — shunz / detail
  94. Added comments — shunz / detail
  95. Refactored unit tests — shunz / detail
  96. Refactored source terms and added unit tests for PDEIBL2D — shunz / detail
  97. Refactored ctau_{turb,init}.  Unit tested turbulent sub-cell source term for amplification eqn in cut-cell transition formulation — shunz / detail
  98. Fix for vera formatting check.  Also a minor refactoring — shunz / detail
  99. Minor refactoring — shunz / detail
  100. Refactored ctau_{turb,init} fitting calculation — shunz / detail
  101. Forgot to save  this in the last commit... — shunz / detail
  102. Unit-tested upwind advective flux in two-fIeld IBL pde class — shunz / detail
  103. Minor commenting — shunz / detail
  104. Minor refactoring — shunz / detail
  105. minor refactoring — shunz / detail
  106. Refactored dummy matching equations for fitted transition — shunz / detail
  107. Forgot to commit this in the last pass — shunz / detail
  108. Modified artificial amplification source term in fully turbulent elements.  Pluse other minor refactoring — shunz / detail
  109. Make sure scales are non-negative — shunz / detail
  110. Enabled G=ln(ctau^0.5) as a primary unknown in place of ctau.  It helps with nonlinear solution. — shunz / detail
  111. Fixed unit tests — shunz / detail
  112. Dumping matching variables for transition — shunz / detail
  113. Refactored underrelaxation to guard against zero G.  Added forced-transition subiteration output dump — shunz / detail
  114. Turned off limiting on G variable.  Made H validity check tighter — shunz / detail
  115. Playing with a different form of lag equation in fitted transition approach.  Not much luck though.  So, as of now, using G as the primary unknown is already helpful — shunz / detail
  116. Playing with point source for setting ctau_{Turb,init} — shunz / detail
  117. Refactored forced transition point source for ctau jump — shunz / detail
  118. playing with point source for ctau jump in free transition — shunz / detail
  119. Tried implementing ctau jump condition via flux modification — shunz / detail
  120. Got a captured transition result with sharp ctau jump at free transition front — shunz / detail
  121. Added explicit instantiation — shunz / detail
  122. Genearalized HubTrace boundary trace integrand by ridding of any PDE/BC dependence — shunz / detail
  123. Generalized IBL solution DOF setter — shunz / detail
  124. Implemented a different formulation for captured transition by splitting the amplification and lag equations — shunz / detail
  125. Added instantiations — shunz / detail
  126. Fixed amplification and lag source terms in new IBL PDE class — shunz / detail
  127. Verified NACA0012 Re1e5 results against XFOIL (separated fully laminar BL) — shunz / detail
  128. Add a lower limit to the modeled turbulent initial ctau — shunz / detail
  129. Minor refactoring — shunz / detail
  130. Fixed a bug in solution initialization — shunz / detail
  131. Refactored masterState calculation from cumulation to assignment — shunz / detail
  132. minor tidying — shunz / detail
  133. Refactored smooth intermittency blending to allow for natural and forced transition as the same time — shunz / detail
  134. Allowed for initializing p0 IBL solution from input file — shunz / detail
  135. Added H upper limit in validity check — shunz / detail
  136. SplitAmpLag working on NACA0012 Re 2e5 separation bubble — shunz / detail
  137. Cosmetic edit — shunz / detail
  138. Decoupled nt variables of BL from nt of the wake — shunz / detail
  139. Converged p=0 solution on ne64 and n128 grids for Eppler 387 case — shunz / detail
  140. minor cleanup — shunz / detail
  141. renaming — shunz / detail
  142. Refactored state validity check — shunz / detail
  143. minor refactoring — shunz / detail
  144. Added IO files for testing Eppler 387 airfoil — shunz / detail
  145. Typo fix — shunz / detail
  146. Tried PTC for IBLSplitAmpLag captured transition case — shunz / detail
  147. Further simplified amplification equation at hubtrace — shunz / detail
  148. Added grid and initial solution files — shunz / detail
  149. minor cleanup — shunz / detail
  150. added hessian to Joukowski solution — allmaras / detail
  151. bug fix in Joukowski test — allmaras / detail
  152. Minor edit — shunz / detail
  153. Refactored a case — shunz / detail
  154. Fixed calls to jacobianTranspose of daisy-chained algebraic equation set — shunz / detail
  155. Cleanup — shunz / detail
  156. minor refactoring — shunz / detail
  157. minor edit to running case — shunz / detail
  158. Refactored printed normed reisudals when line-search fails. — shunz / detail
  159. Refactored running case — shunz / detail
  160. Minor cleanup — shunz / detail
  161. Minor fix — shunz / detail
  162. Refactored uncoupled IBL case and added pyrite file — shunz / detail
  163. Fixed HDG continuous implementation.  Reverted to Var(delta, A, G) to not hacking scaling delta and A.  Cleaned up some system tests — shunz / detail
  164. Refactored two test cases — shunz / detail
  165. Added Hk lower limit check when checking state validity for IBLUniField with correlation closures — shunz / detail
  166. Added pyrite check file.  Refactored test cases and enabled PTC on one of them. — shunz / detail
  167. Fix pyrite check — shunz / detail
  168. Fixed undefined variables — shunz / detail
  169. Updated a pyrite file to be consistent with the latest settings in IBLUniField — shunz / detail
  170. Deleted a redundant case — shunz / detail
  171. added some commented out hack for fully turbulent BL simulation with IBLUniField — shunz / detail
  172. Updated pyrite file — shunz / detail
  173. Added exceptions as safe guards — shunz / detail
  174. cosmetic refactoring — shunz / detail
  175. cosmetic refactoring — shunz / detail
  176. Added a pyrite file and changed test file name — shunz / detail
  177. turned on set IBL dofs for p=0 for DsThG — shunz / detail
  178. Dumped singular jacobian when UMFPACK finds it — shunz / detail
  179. Refactored system test cases — shunz / detail
  180. Using a less conservative initial CFL for PTC in a test case — shunz / detail
  181. Refactored system test case — shunz / detail
  182. Added some auxiliary functions for system test cases — shunz / detail
  183. Added some debugging options — shunz / detail
  184. Minor refactoring — shunz / detail
  185. Simplified upwind flux in IBL to improve code reuse — shunz / detail
  186. Commented out hacks.  Added minor guards.  Dumped matrix when UMFPACK linear solve fails. — shunz / detail
  187. Laminar-turbulent blending works for Eppler 387 now.  Turned on G limiting in updateFraction — shunz / detail
  188. Cleaned up and refactored projection to Qauxi — shunz / detail
  189. Removed redundant TopoDim templates following Hugh's recent updates — shunz / detail
  190. playing with numerical flux and nt growth rate in laminar-turbulent blending formulation — shunz / detail
  191. Playing with various grid-dependent laminar-turbulent blending strategies — shunz / detail
  192. minor cleanup — shunz / detail
  193. Use value instead of reference since equivalence is checked instead of identity — shunz / detail
  194. Added output — shunz / detail
  195. Tweaked LF flux dissipation coefficient a bit.  Modified lag source term to prevent ctau to drop with ctau_Tinit after reaching its peak.  Hacking grid dependent blending.  Left system test case unchecked for the moment — shunz / detail
  196. Added Hs derivatives with unit tests.  Fixed typos in closure unit tests — shunz / detail
  197. Abstracted Re_theta calculation — shunz / detail
  198. Added Roe flux based on arithmetic average state — shunz / detail
  199. Added class for setting qaux field from file — shunz / detail
  200. Typo fix — shunz / detail
  201. Minor refactoring — shunz / detail
  202. Output blended IBL quantities — shunz / detail
  203. Added an uncoupled IBL case — shunz / detail
  204. Added qinif initialization to a shared file for setting up IBL case — shunz / detail
  205. Using qinf initialization from a shared file — shunz / detail
  206. Refactored Roe flux for IBL — shunz / detail
  207. Added entropy fix — shunz / detail
  208. Just hacking around.  The hacky stuff are turned off — shunz / detail
  209. Reformulated DG-IBL interface flux and finally fixed solution oscillation in transition cases.  Saved other miscellaneous updates — shunz / detail
  210. cosmetic changes (with hacks being commented out) — shunz / detail
  211. Normalize KE equation by q^2 — shunz / detail
  212. editted comments — shunz / detail
  213. Use pde fluxAdvective function to calculate outflow flux at Hubtrace boundary — shunz / detail
  214. cleaned up some hacks — shunz / detail
  215. minor cleanup — shunz / detail
  216. Accidentally messed up blended source term.  Restore it now. — shunz / detail
  217. Stashed some intermediate edits — shunz / detail
  218. Fixed the numerical flux of IBL momentum equations to eliminate solution jumps and/or oscillations.  Also cleaned up temporary hacks. — shunz / detail
  219. Make intermittency length scale a parameter in the transition model.  Cleaned up old hacks in in PDEIBLSplitAmpLag2D — shunz / detail
  220. More cleanup — shunz / detail
  221. minor edits — shunz / detail
  222. Disable search for boost-cmake; otherwise, runs into conflicts with FindBoost.  Need to resolve this if using boost-cmake in the future — shunz / detail
  223. Minor cleanup following last merge commit — shunz / detail
  224. Minor fixes to keep up with changes in the main branch — shunz / detail
  225. Add pyrite check on E387 airfoil transition separation bubble case — shunz / detail
  226. Update Solve2D_Coupled4x4_IBLSplitAmpLag_CorrelationClosure_CapturedTransition_PTC_btest.cpp — shunz / detail
  227. Cleaned up the numerical flux options in Qauxi projection.  All three numerical fluxes produce similar well-behaved results.  Add a sandbox case — shunz / detail
  228. working on advective field case... — cfrontin / detail
  229. asdfasdf — cfrontin / detail
  230. working on the advective field and it's broken LOL — cfrontin / detail
  231. fix mpi dg — cfrontin / detail
  232. trying to figure out idiosyncracy — cfrontin / detail
  233. cont'd — cfrontin / detail
  234. cont'd pt. ii — cfrontin / detail
  235. name fix — cfrontin / detail
  236. oopsie — cfrontin / detail
  237. working on random field — cfrontin / detail
  238. updated random fields, should be working but untested. — cfrontin / detail
  239. unit tests for adjoint — arthuang / detail
  240. fixes to compute AR etc. — hcarson / detail
  241. Fix for EPIC 2D without geometry — galbramc / detail
  242. jenkins fix, holdover code. — cfrontin / detail
  243. adding block pivoting to ilu — arthuang / detail
  244. a VMSDBR2 version of the DeltaWing Chain toy — hcarson / detail
  245. Enable static condensation with MKL — galbramc / detail
  246. Missed a static condensation step — galbramc / detail
  247. Another MKL static condensation fix — galbramc / detail
  248. Relaxed tolerance — galbramc / detail
  249. a VMSDBR2 Double BL, also lining up the 3 so that they are the same. HOWEVER, Seems to be something very wrong with plain VMSD, the adapt looks crap and the error is enormous.... — hcarson / detail
  250. Updates for latest refine — galbramc / detail
  251. urop fix? — cfrontin / detail
  252. jenkins fix, odds and ends. — cfrontin / detail
  253. added 2D+T VMSD AD case. — cfrontin / detail
  254. minor edit — shunz / detail
  255. refactored the new PDE IBL class and added unit tests — shunz / detail
  256. fixed LF flux — shunz / detail
  257. Relocated blended intermittency to PDE class.  Added unit tests. — shunz / detail
  258. Added unit tests to VarInterpret — shunz / detail
  259. Fixed intermittency usage in auxi equation — shunz / detail
  260. refactored intermittency calculation calling signature across different variants of IBL formulations — shunz / detail
  261. Fixed type — shunz / detail
  262. Refactored unit tests to keep up with updates in the thickness class — shunz / detail
  263. Cleaned up manifold interface integrand implementation.  Minor type corrections for unit tests involving Surreal types. — shunz / detail
  264. Fixed ping tests by adjusting the reference solution and step size — shunz / detail
  265. Refactored  PDEIBLSplitAmgLag2D default flux and ctau_min.  Added pyrite check files — shunz / detail
  266. updated pyrite files — shunz / detail
  267. Refactored IBL solution file reader.  Cleaned up system tests for various IBL formulations — shunz / detail
  268. Removed IO file clutter — shunz / detail
  269. Added variable data constructors.  Fixed types.  File cleanup — shunz / detail
  270. Fixed IBL solution reader usage — shunz / detail
  271. Recovered a system test on IBLUniField — shunz / detail
  272. Cleaned up system tests — shunz / detail
  273. Fixed IBL solution reader usage — shunz / detail
  274. Fixed duplicate symbols by inline.  Added a missing pyrite check file — shunz / detail
  275. Relaxed pyrite tolerance.  Fixed unit tests for IBL soluton file reader — shunz / detail
  276. Suppressed file output for Jenkins — shunz / detail
  277. Suppressed one more file output for Jenkins. — shunz / detail
  278. Fixed unused variable — shunz / detail
  279. Relaxed pyrite tolerances for gnu — shunz / detail
  280. Subtle typo in pyrite filename — shunz / detail
  281. Relaxed tolerances for intel compilers — shunz / detail
  282. Relaxed pyrite tolerance.  Added explicit instantiation to fix linker error — shunz / detail
  283. Relaxed tolerance. Fixed timeout on Jenkins — shunz / detail
  284. Relaxed pyrite tolerances — shunz / detail
  285. relaxed tolerance on d/dxdy test — allmaras / detail
  286. Replace Joukowski q1 grid — galbramc / detail
  287. coverage improvement — cfrontin / detail
  288. hotfix — cfrontin / detail
  289. quick fix — cfrontin / detail
  290. Attempt to use parallel MKL (does not work yet). Other small cleanups. — galbramc / detail
  291. Added cartesian table lookup for PorusMedia SPE calculations — galbramc / detail
  292. Use atlas blas on rhel7 — galbramc / detail
  293. 2d+t hex solve patch. — cfrontin / detail
  294. belated nomenclature fix — cfrontin / detail
  295. Consistent delete — galbramc / detail
  296. VMSDBR2 3D+T additions. — cfrontin / detail
  297. added squarechannel vmsd br2 changes — cfrontin / detail
  298. General PETSc verson on macOZ for jenkins — galbramc / detail
  299. Suppress tetgen CMake warning. Relax tolerance for macOS — galbramc / detail
  300. Allow MKL as BLAS library. Update macOS PETSc. Fix tolerance. — galbramc / detail
  301. Add option to dump per rank matrix market file from PETSc — galbramc / detail
  302. 1st crack at SPE10 test case; compiles but errors out when run; — allmaras / detail
  303. unit tests for PorosityModel_CartTable — allmaras / detail
  304. unit tests for Porosivity and Permeability — allmaras / detail
  305. Fix for PETSc matrix market dump — galbramc / detail
  306. bug fixes in 2-phase porous flow classes/tests; added CartTable unit tests for PDETwoPhase2D — allmaras / detail
  307. updated SPE10 test case to include lookup poro/perm tables; BCs now complaining about CartTable — allmaras / detail
  308. reverted to original functionality on fluxAdvectiveUpwind: no-op rather than developer exception; — allmaras / detail
  309. added "#include <fstream>" in lookup table tests — allmaras / detail
  310. SPE10 testcase: added avro include files and check on SANS_AVRO — allmaras / detail
  311. cppcheck fixes — galbramc / detail
  312. Jenkins updates — galbramc / detail
  313. Added Kyle Anderson k-ordering to PETSc — galbramc / detail
  314. Another jenkins update — galbramc / detail
  315. Fix warnings — galbramc / detail
  316. vmsd sip -> vmsd br2 in sandbox — cfrontin / detail
  317. Update CMake build to Nlopt 2.6.1 — galbramc / detail
  318. SPE10 testcase: added needed instantiations for BC parameters, algebraic eq set, error estimates — allmaras / detail
  319. more vmsd sip -> vmsd br2 in sandbox — cfrontin / detail
  320. Fix k-ordering — galbramc / detail
  321. Fix for k-ordering with BAIJ PETSc matrices — galbramc / detail
  322. fixed typo in comments; no change in functionality — allmaras / detail
  323. SPE10 testcase: fixed typos/bugs in instantiations — allmaras / detail
  324. SPE10: changed avro check to BOOST_FAIL, so code always compiles even if USE_AVRO not defined — allmaras / detail
  325. Implemented refine 2D API interface — galbramc / detail
  326. SPE10: generalized output functional to sum over a vector of outflow wells — allmaras / detail
  327. SPE10: added multiple wells to output functional — allmaras / detail
  328. SPE10: trying to achieve successful compile when SANS_AVRO not defined — allmaras / detail
  329. SPE10: added checks on porosity & permeability table lookups — allmaras / detail
  330. Upgrade ccache version — galbramc / detail
  331. vmsd -> sip again — cfrontin / detail
  332. 2D refine updates to swork with CAD. Not done yet. — galbramc / detail
  333. Fix compile error — galbramc / detail
  334. Suppress some cppcheck warnings — galbramc / detail
  335. Tweak for jenkins Commit script — galbramc / detail
  336. less sharp exact soln, BR2 not SIP — cfrontin / detail
  337. and output fix — cfrontin / detail
  338. eliminated option to use single/scalar source to initialize OutputTwoPhase2D_Flowrate; — allmaras / detail
  339. added test for 1x1 constant lookup table — allmaras / detail
  340. typo fix in output functional source class name (SourceClass -> SourceOutflowClass) — allmaras / detail
  341. another intel suppression for valgrind — galbramc / detail
  342. cppcheck suppression — galbramc / detail
  343. Added a scaling factor to PermeabilityModel2D_CartTable to fix units in SPE10 case. Added rock compressibility to PorosityModel_CartTable, and updated unit tests. Added phi, Kxx, and Kyy as derived quantities to PDETwoPhase2D for visualization. Added table look-up files with homogeneous data for SPE10. — savithru / detail
  344. Fixed unused variable warning — savithru / detail
  345. forcing function adjustment... not improved :( — cfrontin / detail
  346. Update for latest refine — galbramc / detail
  347. SingularException destructor instantiation — galbramc / detail
  348. Rename BCEulermitAVDiffusion to BCEulermitAVSensor since the name makes more sense — blsc / detail
  349. First pass at including artificial viscosity model from Holst (2020) — blsc / detail
  350. GCC9 caught some unitialized data — blsc / detail
  351. A few bugs — blsc / detail
  352. Unit tests and associated bug fixes — blsc / detail
  353. Fix library ordering for HSM — galbramc / detail
  354. Updated gcc warning regex — galbramc / detail
  355. Increase timout times — galbramc / detail
  356. Slight correction to refine unit test — galbramc / detail
  357. Updates for refine incliding 2D triangle hack. Still need help from Mike. — galbramc / detail
  358. Dissable refine 2D test — galbramc / detail
  359. Refine now works in 2D — galbramc / detail
  360. Add restart interface for refine — galbramc / detail
  361. Increase timeour for refine2D tests — galbramc / detail
  362. Use MPI_sleep for avro execution — galbramc / detail
  363. Only write EGADS file from one processor and reduce iterations in refine2D_btest — galbramc / detail
  364. Add missing include — galbramc / detail
  365. Relax refine timie a bit more — galbramc / detail
  366. Add missing link library — galbramc / detail
  367. refine2D with EGADS still does not quite work. — galbramc / detail
  368. Fix for parallel 2D refine — galbramc / detail
  369. One more refine fix — galbramc / detail
  370. Only remove files on the rank 0 processor — galbramc / detail
  371. Warning fixes — galbramc / detail
  372. Fix up Box Tet WakeCut for adjoint — galbramc / detail
  373. Added Ismail-Roe entropy conservative flux (with optional entropy fix based on Harten) in 2D. Unit tested to ensure: primal and entropy consistency for the entropy conservative formulation, primal consistency and entropy dissipation for version with entropy fix. Extension to RANSSA NOT implemented. — blsc / detail
  374. Added header: src/pde/NS/Roe.h to src/pde/NS/IsmailRoe.h to it can access datatype: RoeEntropyFix — blsc / detail
  375. Typo fix in enum RoeEntropyFix: eIsmailRoeEntopyNeutral -> eIsmailRoeEntropyNeutral — blsc / detail
  376. Added SPE10 permeability datasets with reduced contrast ratios — savithru / detail
  377. Updated quarter five spot case to use avro — savithru / detail
  378. lorenz building, not converging. need unit tests. — blsc / detail
  379. in progress... — blsc / detail
  380. lorenz in progress, not converging, seems to need stabilization. — blsc / detail
  381. working on vmsd. — blsc / detail
  382. added DG, broken. now VMSD and DGBR2 are both broken and CG is unstable :) — blsc / detail
  383. more of the same. — blsc / detail
  384. made some fixes, fem of lorenz seems to be working (w/ 4M elements...) — blsc / detail
  385. trying to figure out what's wrong — blsc / detail
  386. unit test addition.. — blsc / detail
  387. hmm looking for valgrid shit now. — blsc / detail
  388. added exact solution for alpha=0 case. — blsc / detail
  389. configured for convergence test, convergent. — blsc / detail
  390. output tricks — blsc / detail
  391. working on homotopy pde — blsc / detail
  392. for marshall — blsc / detail
  393. Some progress for BCHomotopy — blsc / detail
  394. homotopy in progress (still) — blsc / detail
  395. on the way to a block 2x2 version of htc... — blsc / detail
  396. slow but steady. — blsc / detail
  397. on the curve between the easy solution and the hard one — blsc / detail
  398. bob loblaw law blog — blsc / detail
  399. homotopy might be working might be leaking might be a figment of my imagination. — blsc / detail
  400. fieldbase uninitialized data fix. — blsc / detail
  401. homotopy running but breaking for chaos :( — blsc / detail
  402. added dumps — blsc / detail
  403. fixed homotopy bug i think. — blsc / detail
  404. added adaptive stepping to homotopy. — blsc / detail
  405. ready for ben — blsc / detail
  406. state of the art — blsc / detail
  407. small changes. — blsc / detail
  408. Removed PDE template from BCLorenz since it was no longer needed. Generalized the new homotopy integrand so it can be applied to Real and VectorS PDE::ArrayQ types. Updates required adding move construction and move assignment operator to VectorBlock_2 to prevent warnings about using implicit constructors under g++9. Propogated the required changes to unit test and sandbox cases. — blsc / detail
  409. Statically condensed VMSD with homotopy: Updated the jacobian functions in the the HTC algebraic equation set, added logic for static condensation to Block 2x2 matrix interface with UMFPACK, and also had to expose the types of the vectors in VectorBlock_2. Also updated the Homotopy logic to be more robust, which mostly consists of making sure steps taken in the predictor phase are valid. — blsc / detail
  410. Added ability to pass q and qp into source term individually for VMSDBR2. This is needed for some of the resolution sensors I am experimenting with for shock capturing. This required an additional source function to be added to PDEs that takes q, qp, gradq, and gradqp. Currently, this new function forwards (q+qp) and (gradq+gradqp) to the original source function. Unit tests have been added to test consistency of this new source term. — blsc / detail
  411. Added new boundary condition: BCTypeFullStateRadialInflow_mitState. This is a FullState_mitState style boundary condition, except velocity magnitude is specified. The direction is then calculated as radially outward from an origin at (0,0). — blsc / detail
  412. Added PDESourceOnly2D which implements a pde q - a = 0. This is for use as the auxiliary equation for Homotopy continuation. Unit tests added to applying this PDE to adevction diffusion, Euler and Euler with artificial diffusion. Also found that the jacobianMasterState and jacobianFluxAdvectveTime functions were reversed for the sensor PDE. This has been fixed and unit tests updated. — blsc / detail
  413. Setting up a bump in a subsonic inviscid flow. Now verbose enables / disables all console output of the halving linesearch. Also added some extra function to PDEEuler2D to forward calls that have params. — blsc / detail
  414. Added sourceCoarse and sourceFine function calls to VMSDBR2, which are source terms weighted against the coarse and fine space test functions respectively. For the most part these forward calls to the source function in the PDE. These are required because VMSD does not have a unique solution for the PDE q - a = 0 if a is a constant. Since this is the case in the SourceOnly PDE, that PDE now solves (\bar{q} - a) = 0, and q' = 0. — blsc / detail
  415. Setting up RadialShock problem using VMSDBR2 and Homotopy. This required instantiating objects relating to the Block 2x2 linear algebra for PDEs of dimension 5. It also required adding the new source functions to the Sensor PDE. — blsc / detail
  416. Renamed eLaplaceViscosity to eLaplaceViscosityEnthalpy in enum EulerArtViscosity. This is a more descriptive name for this option: artificial diffusion is applied to the gradient of total enthalpy (not total internal energy as a pure Laplacian operator would suggest). Now the option eLaplaceViscosityEnergy can be added to the enum EulerArtViscosity to describe the artificial diffusion being applied to the conservation variables. — blsc / detail
  417. Upgraded to latest AFLR — galbramc / detail
  418. Added eLaplaceViscosityEnergy to enum EulerArtViscosity. This applies a Laplacian operator to the conservation variable gradient (i.e. energy gradient not enthalpy gradient). System tests have been added to ensure that the calculation is correct for Euler2D and RANSSA2D PDEs. — blsc / detail
  419. Fixed two bugs highlighted by Jenkins. 1) PDELorenz was using abs on a Real. 2) Several lines in SolutionFunction_Euler2D.h were too long. — blsc / detail
  420. Look for Real Time library for AFLR — galbramc / detail
  421. Fix for last commit — galbramc / detail
  422. A few AFLR fixes — galbramc / detail
  423. Previous commits overwrote some updates to the PETSc interface, so had to revert to commit 8fa5bcb008f4c19ec223d6ebfa628f6d4d9354cd for those files. Also updated files that failed vera checks. — blsc / detail
  424. Instantiations for Block2x2 systems for a PDE of 5 equations were missing from MKL. Also, the version of UMFPack on Ubuntu 12.04 does not support the new exception types, so have reverted src/LinearAlgebra/SparseLinAlg/Direct/UMFPACK/UMFPACKSolver.cpp back to commit 45d3cd53036a51bccf943d9c5097544bd220d8f8 — blsc / detail
  425. Relaxed tolerances on JacobianCell_VMSD_BR2_AD_btest for intel. Added #ifdef protection on the new UMFPACk error flags for older versions of UMFPack (pre 5.5) — blsc / detail
  426. Updated BuildBoost to Boost 1.72 — galbramc / detail
  427. Updated AFLR to 16.30.11. Lots of cppcheck fixes. — galbramc / detail
  428. Add missing include — galbramc / detail
  429. Fixes for AFLR4 farfield mesh generation — galbramc / detail
  430. A few nightly fixes — galbramc / detail
  431. Add continuousGlobalMap for LIP solvers — galbramc / detail
  432. Fix the last fix — galbramc / detail
  433. Use CMake python when building boost — galbramc / detail
  434. Fix for gold linker with MKL — galbramc / detail
  435. Some more nightly fixes — galbramc / detail
  436. One more nightly fix — galbramc / detail
  437. CMake fixes for CentOS 8 — galbramc / detail
  438. Relax timing some more — galbramc / detail
  439. Correction for finding boost python — galbramc / detail
  440. Some more time relaxation — galbramc / detail
  441. Look for vera++ on CentOS 8 as well — galbramc / detail
  442. speed up a system test by using a better initial solution — shunz / detail
  443. Boost numpy was added with 1.65 — galbramc / detail
  444. remove some system tests that are no longer essential — shunz / detail
  445. remove more non-essential system test — shunz / detail
  446. remove more non-essential system test — shunz / detail
  447. Check if NLOPT direcfory exists on jenkins node — galbramc / detail
  448. Fix array out of bounds for refine. Fix parallel make for jenkins. — galbramc / detail

#259 (Apr 16, 2020, 8:05:33 AM)

  1. Added variable interpreter for primary unknowns = {delta*, theta, G} — shunz / detail
  2. Refactored IBL profile type identifier — shunz / detail
  3. Added unit tests to VarInterpret — shunz / detail
  4. Fixed unit test — shunz / detail
  5. Added a new class for calculating thicknesses and coeffcients, along with unit tests. — shunz / detail
  6. Typo fixes — shunz / detail
  7. Refactored PDEIBLUniField to use genealized thicknesses/coeffcients calculation routines.  Verified uncoupled IBL run with airfoil only — shunz / detail
  8. Refactoring to get coupled IBLUniField to work without transition.  Caveat: pyrite check is fine with delta & A variables, but mismatches G (maybe numerical precision issue? to be eamined) — shunz / detail
  9. Cleaned up obsolete stuff — shunz / detail
  10. Cleanup — shunz / detail
  11. Renaming/cleanup — shunz / detail
  12. Preliminary implementation of correlation closure — shunz / detail
  13. Minor refactoring — shunz / detail
  14. First run of correlation-closure IBL on an uncoupled airfoil-only case, compared reasonably well with profile-closure results — shunz / detail
  15. minor edit — shunz / detail
  16. Added turbulent closure from MSES paper.  Ran coupled IBL on airfoil+wake configuration, comparing reasonably well with IBL based on profile closures — shunz / detail
  17. Distinguished H from Hk (kinematic). — shunz / detail
  18. Reduced code repetition — shunz / detail
  19. Added some XFOIL closures — shunz / detail
  20. Added more XFOIL closures — shunz / detail
  21. Typo fixes — shunz / detail
  22. Refactored Uslip calculation — shunz / detail
  23. Fixed a typo in xfoil laminar BL closure — shunz / detail
  24. Added pyrite check for XFOIL laminar BL closure — shunz / detail
  25. Recovered the correct double dissipation for wake.  Added pyrite files — shunz / detail
  26. Added output dumping functions for correlation-closure IBL — shunz / detail
  27. Refactored output function and added a utility function — shunz / detail
  28. Added XFOIL amplification growth rate closure, which is almost identical to IBL — shunz / detail
  29. Modified lag equation and CDiss closure a bit. — shunz / detail
  30. With modified lag equation, laminarBL+turbulentWake results matches XFOIL very closely — shunz / detail
  31. Added captured transition test case with pyrite file for correlation-based IBL — shunz / detail
  32. Fixed an innocuous bug — shunz / detail
  33. Re-enabled LF flux — shunz / detail
  34. Added machinery for loading up IBL solution from input file — shunz / detail
  35. Make LF flux a default for IBL — shunz / detail
  36. Refactored blended intermittency calculation for correlation-based closure — shunz / detail
  37. Do no apply blending for wake — shunz / detail
  38. Switched to generalized thickness/coeffcient calculation for duplicate-field IBL as well.  Verified uncoupled airfoil case with full upwind — shunz / detail
  39. Bug fix — shunz / detail
  40. Verified coupled case with laminarBL+turbulentWake — shunz / detail
  41. Minor refactoring — shunz / detail
  42. minor cleanup — shunz / detail
  43. Added instantiation and fixed transition test cases — shunz / detail
  44. Added a missing method — shunz / detail
  45. Added a pyrite check for NACA0012 case (with flow separation) — shunz / detail
  46. Added a different set of initial solution.  Allowed for laminar BL to turn turbulent during transient state — shunz / detail
  47. Added new IBL variable type — shunz / detail
  48. Added unit tests and fixed bugs — shunz / detail
  49. Generalized dummy equations in duplicate-field IBL pde class — shunz / detail
  50. Follow-up fixes for test cases affected by earlier commits — shunz / detail
  51. Refactored solution initialization — shunz / detail
  52. Enabled correlation-based two-field IBL formulation.  Added test case of coupled IBL with lamiBL+turbWake and corresponding pyrite file. — shunz / detail
  53. Refactored updateFraction in PDEIBL and also fixed the sign in solution update — shunz / detail
  54. Generalized cut-cell machinery to handle two different sets of IBL primary unknowns — shunz / detail
  55. Added pyrite check — shunz / detail
  56. Added comments — shunz / detail
  57. Minor refactoring.  Added missing initial solution file — shunz / detail
  58. Intermediate commit — shunz / detail
  59. Cleaned up test cases — shunz / detail
  60. Refactored updateFraction — shunz / detail
  61. Added a pyrite check — shunz / detail
  62. Relaxed tolerance — shunz / detail
  63. Refactoring updateFraction.  Added an expedient guard against too small Hk — shunz / detail
  64. Added underrelaxation — shunz / detail
  65. Added underrelaxation-related stuff — shunz / detail
  66. Cosmetic edtis — shunz / detail
  67. Verified pyrite check for fitted-transition IBL on NACA0012 Re=1e5 massively separated laminar BL — shunz / detail
  68. Added Cf replacement for turbulent BL with too small Retheta — shunz / detail
  69. Added a pyrite file — shunz / detail
  70. Added a pyrite file — shunz / detail
  71. BC refactoring and unit test fix — shunz / detail
  72. Refactored BC and added unit tests — shunz / detail
  73. Improved coverage by removing redundant safety guards — shunz / detail
  74. Just renaming — shunz / detail
  75. Refactoring and unit testing — shunz / detail
  76. Fixed a bug in Cf correlation.  Added unit test — shunz / detail
  77. Type fix — shunz / detail
  78. Unit tested correlations from XFOIL. — shunz / detail
  79. Refactored amplification growth correlation calculation for speedup --> changed the floating-point arithmetic a bit  Added unit tests. — shunz / detail
  80. added comments — shunz / detail
  81. Cleanup — shunz / detail
  82. Cleanup — shunz / detail
  83. Dump additional output files for examination — shunz / detail
  84. Unit test fixes — shunz / detail
  85. More unit test fixes — shunz / detail
  86. Unit test fix — shunz / detail
  87. Refactored blended intermittency calculation and added unit tests — shunz / detail
  88. Refactored updateFraction and added unit tests — shunz / detail
  89. minor fixes — shunz / detail
  90. matching old system pyrite test: coupled IBLUniField profile-closure lamiBL+turbWake — shunz / detail
  91. Changed initial solution guess — shunz / detail
  92. Bug fix.  Equality operator is sensitive to type: std::string vs its reference. — shunz / detail
  93. Minor refactoring — shunz / detail
  94. Added comments — shunz / detail
  95. Refactored unit tests — shunz / detail
  96. Refactored source terms and added unit tests for PDEIBL2D — shunz / detail
  97. Refactored ctau_{turb,init}.  Unit tested turbulent sub-cell source term for amplification eqn in cut-cell transition formulation — shunz / detail
  98. Fix for vera formatting check.  Also a minor refactoring — shunz / detail
  99. Minor refactoring — shunz / detail
  100. Refactored ctau_{turb,init} fitting calculation — shunz / detail
  101. Forgot to save  this in the last commit... — shunz / detail
  102. Unit-tested upwind advective flux in two-fIeld IBL pde class — shunz / detail
  103. Minor commenting — shunz / detail
  104. Minor refactoring — shunz / detail
  105. minor refactoring — shunz / detail
  106. Refactored dummy matching equations for fitted transition — shunz / detail
  107. Forgot to commit this in the last pass — shunz / detail
  108. Modified artificial amplification source term in fully turbulent elements.  Pluse other minor refactoring — shunz / detail
  109. Make sure scales are non-negative — shunz / detail
  110. Enabled G=ln(ctau^0.5) as a primary unknown in place of ctau.  It helps with nonlinear solution. — shunz / detail
  111. Fixed unit tests — shunz / detail
  112. Dumping matching variables for transition — shunz / detail
  113. Refactored underrelaxation to guard against zero G.  Added forced-transition subiteration output dump — shunz / detail
  114. Turned off limiting on G variable.  Made H validity check tighter — shunz / detail
  115. Playing with a different form of lag equation in fitted transition approach.  Not much luck though.  So, as of now, using G as the primary unknown is already helpful — shunz / detail
  116. Playing with point source for setting ctau_{Turb,init} — shunz / detail
  117. Refactored forced transition point source for ctau jump — shunz / detail
  118. playing with point source for ctau jump in free transition — shunz / detail
  119. Tried implementing ctau jump condition via flux modification — shunz / detail
  120. Got a captured transition result with sharp ctau jump at free transition front — shunz / detail
  121. Added explicit instantiation — shunz / detail
  122. Genearalized HubTrace boundary trace integrand by ridding of any PDE/BC dependence — shunz / detail
  123. Generalized IBL solution DOF setter — shunz / detail
  124. Implemented a different formulation for captured transition by splitting the amplification and lag equations — shunz / detail
  125. Added instantiations — shunz / detail
  126. Fixed amplification and lag source terms in new IBL PDE class — shunz / detail
  127. Verified NACA0012 Re1e5 results against XFOIL (separated fully laminar BL) — shunz / detail
  128. Add a lower limit to the modeled turbulent initial ctau — shunz / detail
  129. Minor refactoring — shunz / detail
  130. Fixed a bug in solution initialization — shunz / detail
  131. Refactored masterState calculation from cumulation to assignment — shunz / detail
  132. minor tidying — shunz / detail
  133. Refactored smooth intermittency blending to allow for natural and forced transition as the same time — shunz / detail
  134. Allowed for initializing p0 IBL solution from input file — shunz / detail
  135. Added H upper limit in validity check — shunz / detail
  136. SplitAmpLag working on NACA0012 Re 2e5 separation bubble — shunz / detail
  137. Cosmetic edit — shunz / detail
  138. Decoupled nt variables of BL from nt of the wake — shunz / detail
  139. Converged p=0 solution on ne64 and n128 grids for Eppler 387 case — shunz / detail
  140. minor cleanup — shunz / detail
  141. renaming — shunz / detail
  142. Refactored state validity check — shunz / detail
  143. minor refactoring — shunz / detail
  144. Added IO files for testing Eppler 387 airfoil — shunz / detail
  145. Typo fix — shunz / detail
  146. Tried PTC for IBLSplitAmpLag captured transition case — shunz / detail
  147. Further simplified amplification equation at hubtrace — shunz / detail
  148. Added grid and initial solution files — shunz / detail
  149. minor cleanup — shunz / detail
  150. added hessian to Joukowski solution — allmaras / detail
  151. bug fix in Joukowski test — allmaras / detail
  152. Minor edit — shunz / detail
  153. Refactored a case — shunz / detail
  154. Fixed calls to jacobianTranspose of daisy-chained algebraic equation set — shunz / detail
  155. Cleanup — shunz / detail
  156. minor refactoring — shunz / detail
  157. minor edit to running case — shunz / detail
  158. Refactored printed normed reisudals when line-search fails. — shunz / detail
  159. Refactored running case — shunz / detail
  160. Minor cleanup — shunz / detail
  161. Minor fix — shunz / detail
  162. Refactored uncoupled IBL case and added pyrite file — shunz / detail
  163. Fixed HDG continuous implementation.  Reverted to Var(delta, A, G) to not hacking scaling delta and A.  Cleaned up some system tests — shunz / detail
  164. Refactored two test cases — shunz / detail
  165. Added Hk lower limit check when checking state validity for IBLUniField with correlation closures — shunz / detail
  166. Added pyrite check file.  Refactored test cases and enabled PTC on one of them. — shunz / detail
  167. Fix pyrite check — shunz / detail
  168. Fixed undefined variables — shunz / detail
  169. Updated a pyrite file to be consistent with the latest settings in IBLUniField — shunz / detail
  170. Deleted a redundant case — shunz / detail
  171. added some commented out hack for fully turbulent BL simulation with IBLUniField — shunz / detail
  172. Updated pyrite file — shunz / detail
  173. Added exceptions as safe guards — shunz / detail
  174. cosmetic refactoring — shunz / detail
  175. cosmetic refactoring — shunz / detail
  176. Added a pyrite file and changed test file name — shunz / detail
  177. turned on set IBL dofs for p=0 for DsThG — shunz / detail
  178. Dumped singular jacobian when UMFPACK finds it — shunz / detail
  179. Refactored system test cases — shunz / detail
  180. Using a less conservative initial CFL for PTC in a test case — shunz / detail
  181. Refactored system test case — shunz / detail
  182. Added some auxiliary functions for system test cases — shunz / detail
  183. Added some debugging options — shunz / detail
  184. Minor refactoring — shunz / detail
  185. Simplified upwind flux in IBL to improve code reuse — shunz / detail
  186. Commented out hacks.  Added minor guards.  Dumped matrix when UMFPACK linear solve fails. — shunz / detail
  187. Laminar-turbulent blending works for Eppler 387 now.  Turned on G limiting in updateFraction — shunz / detail
  188. Cleaned up and refactored projection to Qauxi — shunz / detail
  189. Removed redundant TopoDim templates following Hugh's recent updates — shunz / detail
  190. playing with numerical flux and nt growth rate in laminar-turbulent blending formulation — shunz / detail
  191. Playing with various grid-dependent laminar-turbulent blending strategies — shunz / detail
  192. minor cleanup — shunz / detail
  193. Use value instead of reference since equivalence is checked instead of identity — shunz / detail
  194. Added output — shunz / detail
  195. Tweaked LF flux dissipation coefficient a bit.  Modified lag source term to prevent ctau to drop with ctau_Tinit after reaching its peak.  Hacking grid dependent blending.  Left system test case unchecked for the moment — shunz / detail
  196. Added Hs derivatives with unit tests.  Fixed typos in closure unit tests — shunz / detail
  197. Abstracted Re_theta calculation — shunz / detail
  198. Added Roe flux based on arithmetic average state — shunz / detail
  199. Added class for setting qaux field from file — shunz / detail
  200. Typo fix — shunz / detail
  201. Minor refactoring — shunz / detail
  202. Output blended IBL quantities — shunz / detail
  203. Added an uncoupled IBL case — shunz / detail
  204. Added qinif initialization to a shared file for setting up IBL case — shunz / detail
  205. Using qinf initialization from a shared file — shunz / detail
  206. Refactored Roe flux for IBL — shunz / detail
  207. Added entropy fix — shunz / detail
  208. Just hacking around.  The hacky stuff are turned off — shunz / detail
  209. Reformulated DG-IBL interface flux and finally fixed solution oscillation in transition cases.  Saved other miscellaneous updates — shunz / detail
  210. cosmetic changes (with hacks being commented out) — shunz / detail
  211. Normalize KE equation by q^2 — shunz / detail
  212. editted comments — shunz / detail
  213. Use pde fluxAdvective function to calculate outflow flux at Hubtrace boundary — shunz / detail
  214. cleaned up some hacks — shunz / detail
  215. minor cleanup — shunz / detail
  216. Accidentally messed up blended source term.  Restore it now. — shunz / detail
  217. Stashed some intermediate edits — shunz / detail
  218. Fixed the numerical flux of IBL momentum equations to eliminate solution jumps and/or oscillations.  Also cleaned up temporary hacks. — shunz / detail
  219. Make intermittency length scale a parameter in the transition model.  Cleaned up old hacks in in PDEIBLSplitAmpLag2D — shunz / detail
  220. More cleanup — shunz / detail
  221. minor edits — shunz / detail
  222. Disable search for boost-cmake; otherwise, runs into conflicts with FindBoost.  Need to resolve this if using boost-cmake in the future — shunz / detail
  223. Minor cleanup following last merge commit — shunz / detail
  224. Minor fixes to keep up with changes in the main branch — shunz / detail
  225. Add pyrite check on E387 airfoil transition separation bubble case — shunz / detail
  226. Update Solve2D_Coupled4x4_IBLSplitAmpLag_CorrelationClosure_CapturedTransition_PTC_btest.cpp — shunz / detail
  227. Cleaned up the numerical flux options in Qauxi projection.  All three numerical fluxes produce similar well-behaved results.  Add a sandbox case — shunz / detail
  228. working on advective field case... — cfrontin / detail
  229. asdfasdf — cfrontin / detail
  230. working on the advective field and it's broken LOL — cfrontin / detail
  231. fix mpi dg — cfrontin / detail
  232. trying to figure out idiosyncracy — cfrontin / detail
  233. cont'd — cfrontin / detail
  234. cont'd pt. ii — cfrontin / detail
  235. name fix — cfrontin / detail
  236. oopsie — cfrontin / detail
  237. working on random field — cfrontin / detail
  238. updated random fields, should be working but untested. — cfrontin / detail
  239. unit tests for adjoint — arthuang / detail
  240. fixes to compute AR etc. — hcarson / detail
  241. Fix for EPIC 2D without geometry — galbramc / detail
  242. jenkins fix, holdover code. — cfrontin / detail
  243. adding block pivoting to ilu — arthuang / detail
  244. a VMSDBR2 version of the DeltaWing Chain toy — hcarson / detail
  245. Enable static condensation with MKL — galbramc / detail
  246. Missed a static condensation step — galbramc / detail
  247. Another MKL static condensation fix — galbramc / detail
  248. Relaxed tolerance — galbramc / detail
  249. a VMSDBR2 Double BL, also lining up the 3 so that they are the same. HOWEVER, Seems to be something very wrong with plain VMSD, the adapt looks crap and the error is enormous.... — hcarson / detail
  250. Updates for latest refine — galbramc / detail
  251. urop fix? — cfrontin / detail
  252. jenkins fix, odds and ends. — cfrontin / detail
  253. added 2D+T VMSD AD case. — cfrontin / detail
  254. minor edit — shunz / detail
  255. refactored the new PDE IBL class and added unit tests — shunz / detail
  256. fixed LF flux — shunz / detail
  257. Relocated blended intermittency to PDE class.  Added unit tests. — shunz / detail
  258. Added unit tests to VarInterpret — shunz / detail
  259. Fixed intermittency usage in auxi equation — shunz / detail
  260. refactored intermittency calculation calling signature across different variants of IBL formulations — shunz / detail
  261. Fixed type — shunz / detail
  262. Refactored unit tests to keep up with updates in the thickness class — shunz / detail
  263. Cleaned up manifold interface integrand implementation.  Minor type corrections for unit tests involving Surreal types. — shunz / detail
  264. Fixed ping tests by adjusting the reference solution and step size — shunz / detail
  265. Refactored  PDEIBLSplitAmgLag2D default flux and ctau_min.  Added pyrite check files — shunz / detail
  266. updated pyrite files — shunz / detail
  267. Refactored IBL solution file reader.  Cleaned up system tests for various IBL formulations — shunz / detail
  268. Removed IO file clutter — shunz / detail
  269. Added variable data constructors.  Fixed types.  File cleanup — shunz / detail
  270. Fixed IBL solution reader usage — shunz / detail
  271. Recovered a system test on IBLUniField — shunz / detail
  272. Cleaned up system tests — shunz / detail
  273. Fixed IBL solution reader usage — shunz / detail
  274. Fixed duplicate symbols by inline.  Added a missing pyrite check file — shunz / detail
  275. Relaxed pyrite tolerance.  Fixed unit tests for IBL soluton file reader — shunz / detail
  276. Suppressed file output for Jenkins — shunz / detail
  277. Suppressed one more file output for Jenkins. — shunz / detail
  278. Fixed unused variable — shunz / detail
  279. Relaxed pyrite tolerances for gnu — shunz / detail
  280. Subtle typo in pyrite filename — shunz / detail
  281. Relaxed tolerances for intel compilers — shunz / detail
  282. Relaxed pyrite tolerance.  Added explicit instantiation to fix linker error — shunz / detail
  283. Relaxed tolerance. Fixed timeout on Jenkins — shunz / detail
  284. Relaxed pyrite tolerances — shunz / detail
  285. relaxed tolerance on d/dxdy test — allmaras / detail
  286. Replace Joukowski q1 grid — galbramc / detail
  287. coverage improvement — cfrontin / detail
  288. hotfix — cfrontin / detail
  289. quick fix — cfrontin / detail
  290. Attempt to use parallel MKL (does not work yet). Other small cleanups. — galbramc / detail
  291. Added cartesian table lookup for PorusMedia SPE calculations — galbramc / detail
  292. Use atlas blas on rhel7 — galbramc / detail
  293. 2d+t hex solve patch. — cfrontin / detail
  294. belated nomenclature fix — cfrontin / detail
  295. Consistent delete — galbramc / detail
  296. VMSDBR2 3D+T additions. — cfrontin / detail
  297. added squarechannel vmsd br2 changes — cfrontin / detail
  298. General PETSc verson on macOZ for jenkins — galbramc / detail
  299. Suppress tetgen CMake warning. Relax tolerance for macOS — galbramc / detail
  300. Allow MKL as BLAS library. Update macOS PETSc. Fix tolerance. — galbramc / detail
  301. Add option to dump per rank matrix market file from PETSc — galbramc / detail
  302. 1st crack at SPE10 test case; compiles but errors out when run; — allmaras / detail
  303. unit tests for PorosityModel_CartTable — allmaras / detail
  304. unit tests for Porosivity and Permeability — allmaras / detail
  305. Fix for PETSc matrix market dump — galbramc / detail
  306. bug fixes in 2-phase porous flow classes/tests; added CartTable unit tests for PDETwoPhase2D — allmaras / detail
  307. updated SPE10 test case to include lookup poro/perm tables; BCs now complaining about CartTable — allmaras / detail
  308. reverted to original functionality on fluxAdvectiveUpwind: no-op rather than developer exception; — allmaras / detail
  309. added "#include <fstream>" in lookup table tests — allmaras / detail
  310. SPE10 testcase: added avro include files and check on SANS_AVRO — allmaras / detail
  311. cppcheck fixes — galbramc / detail
  312. Jenkins updates — galbramc / detail
  313. Added Kyle Anderson k-ordering to PETSc — galbramc / detail
  314. Another jenkins update — galbramc / detail
  315. Fix warnings — galbramc / detail
  316. vmsd sip -> vmsd br2 in sandbox — cfrontin / detail
  317. Update CMake build to Nlopt 2.6.1 — galbramc / detail
  318. SPE10 testcase: added needed instantiations for BC parameters, algebraic eq set, error estimates — allmaras / detail
  319. more vmsd sip -> vmsd br2 in sandbox — cfrontin / detail
  320. Fix k-ordering — galbramc / detail
  321. Fix for k-ordering with BAIJ PETSc matrices — galbramc / detail
  322. fixed typo in comments; no change in functionality — allmaras / detail
  323. SPE10 testcase: fixed typos/bugs in instantiations — allmaras / detail
  324. SPE10: changed avro check to BOOST_FAIL, so code always compiles even if USE_AVRO not defined — allmaras / detail
  325. Implemented refine 2D API interface — galbramc / detail
  326. SPE10: generalized output functional to sum over a vector of outflow wells — allmaras / detail
  327. SPE10: added multiple wells to output functional — allmaras / detail
  328. SPE10: trying to achieve successful compile when SANS_AVRO not defined — allmaras / detail
  329. SPE10: added checks on porosity & permeability table lookups — allmaras / detail
  330. Upgrade ccache version — galbramc / detail
  331. vmsd -> sip again — cfrontin / detail
  332. 2D refine updates to swork with CAD. Not done yet. — galbramc / detail
  333. Fix compile error — galbramc / detail
  334. Suppress some cppcheck warnings — galbramc / detail
  335. Tweak for jenkins Commit script — galbramc / detail
  336. less sharp exact soln, BR2 not SIP — cfrontin / detail
  337. and output fix — cfrontin / detail
  338. eliminated option to use single/scalar source to initialize OutputTwoPhase2D_Flowrate; — allmaras / detail
  339. added test for 1x1 constant lookup table — allmaras / detail
  340. typo fix in output functional source class name (SourceClass -> SourceOutflowClass) — allmaras / detail
  341. another intel suppression for valgrind — galbramc / detail
  342. cppcheck suppression — galbramc / detail
  343. Added a scaling factor to PermeabilityModel2D_CartTable to fix units in SPE10 case. Added rock compressibility to PorosityModel_CartTable, and updated unit tests. Added phi, Kxx, and Kyy as derived quantities to PDETwoPhase2D for visualization. Added table look-up files with homogeneous data for SPE10. — savithru / detail
  344. Fixed unused variable warning — savithru / detail
  345. forcing function adjustment... not improved :( — cfrontin / detail
  346. Update for latest refine — galbramc / detail
  347. SingularException destructor instantiation — galbramc / detail
  348. Rename BCEulermitAVDiffusion to BCEulermitAVSensor since the name makes more sense — blsc / detail
  349. First pass at including artificial viscosity model from Holst (2020) — blsc / detail
  350. GCC9 caught some unitialized data — blsc / detail
  351. A few bugs — blsc / detail
  352. Unit tests and associated bug fixes — blsc / detail
  353. Fix library ordering for HSM — galbramc / detail
  354. Updated gcc warning regex — galbramc / detail
  355. Increase timout times — galbramc / detail
  356. Slight correction to refine unit test — galbramc / detail
  357. Updates for refine incliding 2D triangle hack. Still need help from Mike. — galbramc / detail
  358. Dissable refine 2D test — galbramc / detail
  359. Refine now works in 2D — galbramc / detail
  360. Add restart interface for refine — galbramc / detail
  361. Increase timeour for refine2D tests — galbramc / detail
  362. Use MPI_sleep for avro execution — galbramc / detail
  363. Only write EGADS file from one processor and reduce iterations in refine2D_btest — galbramc / detail
  364. Add missing include — galbramc / detail
  365. Relax refine timie a bit more — galbramc / detail
  366. Add missing link library — galbramc / detail
  367. refine2D with EGADS still does not quite work. — galbramc / detail
  368. Fix for parallel 2D refine — galbramc / detail
  369. One more refine fix — galbramc / detail
  370. Only remove files on the rank 0 processor — galbramc / detail
  371. Warning fixes — galbramc / detail
  372. Fix up Box Tet WakeCut for adjoint — galbramc / detail
  373. Added Ismail-Roe entropy conservative flux (with optional entropy fix based on Harten) in 2D. Unit tested to ensure: primal and entropy consistency for the entropy conservative formulation, primal consistency and entropy dissipation for version with entropy fix. Extension to RANSSA NOT implemented. — blsc / detail
  374. Added header: src/pde/NS/Roe.h to src/pde/NS/IsmailRoe.h to it can access datatype: RoeEntropyFix — blsc / detail
  375. Typo fix in enum RoeEntropyFix: eIsmailRoeEntopyNeutral -> eIsmailRoeEntropyNeutral — blsc / detail
  376. Added SPE10 permeability datasets with reduced contrast ratios — savithru / detail
  377. Updated quarter five spot case to use avro — savithru / detail
  378. lorenz building, not converging. need unit tests. — blsc / detail
  379. in progress... — blsc / detail
  380. lorenz in progress, not converging, seems to need stabilization. — blsc / detail
  381. working on vmsd. — blsc / detail
  382. added DG, broken. now VMSD and DGBR2 are both broken and CG is unstable :) — blsc / detail
  383. more of the same. — blsc / detail
  384. made some fixes, fem of lorenz seems to be working (w/ 4M elements...) — blsc / detail
  385. trying to figure out what's wrong — blsc / detail
  386. unit test addition.. — blsc / detail
  387. hmm looking for valgrid shit now. — blsc / detail
  388. added exact solution for alpha=0 case. — blsc / detail
  389. configured for convergence test, convergent. — blsc / detail
  390. output tricks — blsc / detail
  391. working on homotopy pde — blsc / detail
  392. for marshall — blsc / detail
  393. Some progress for BCHomotopy — blsc / detail
  394. homotopy in progress (still) — blsc / detail
  395. on the way to a block 2x2 version of htc... — blsc / detail
  396. slow but steady. — blsc / detail
  397. on the curve between the easy solution and the hard one — blsc / detail
  398. bob loblaw law blog — blsc / detail
  399. homotopy might be working might be leaking might be a figment of my imagination. — blsc / detail
  400. fieldbase uninitialized data fix. — blsc / detail
  401. homotopy running but breaking for chaos :( — blsc / detail
  402. added dumps — blsc / detail
  403. fixed homotopy bug i think. — blsc / detail
  404. added adaptive stepping to homotopy. — blsc / detail
  405. ready for ben — blsc / detail
  406. state of the art — blsc / detail
  407. small changes. — blsc / detail
  408. Removed PDE template from BCLorenz since it was no longer needed. Generalized the new homotopy integrand so it can be applied to Real and VectorS PDE::ArrayQ types. Updates required adding move construction and move assignment operator to VectorBlock_2 to prevent warnings about using implicit constructors under g++9. Propogated the required changes to unit test and sandbox cases. — blsc / detail
  409. Statically condensed VMSD with homotopy: Updated the jacobian functions in the the HTC algebraic equation set, added logic for static condensation to Block 2x2 matrix interface with UMFPACK, and also had to expose the types of the vectors in VectorBlock_2. Also updated the Homotopy logic to be more robust, which mostly consists of making sure steps taken in the predictor phase are valid. — blsc / detail
  410. Added ability to pass q and qp into source term individually for VMSDBR2. This is needed for some of the resolution sensors I am experimenting with for shock capturing. This required an additional source function to be added to PDEs that takes q, qp, gradq, and gradqp. Currently, this new function forwards (q+qp) and (gradq+gradqp) to the original source function. Unit tests have been added to test consistency of this new source term. — blsc / detail
  411. Added new boundary condition: BCTypeFullStateRadialInflow_mitState. This is a FullState_mitState style boundary condition, except velocity magnitude is specified. The direction is then calculated as radially outward from an origin at (0,0). — blsc / detail
  412. Added PDESourceOnly2D which implements a pde q - a = 0. This is for use as the auxiliary equation for Homotopy continuation. Unit tests added to applying this PDE to adevction diffusion, Euler and Euler with artificial diffusion. Also found that the jacobianMasterState and jacobianFluxAdvectveTime functions were reversed for the sensor PDE. This has been fixed and unit tests updated. — blsc / detail
  413. Setting up a bump in a subsonic inviscid flow. Now verbose enables / disables all console output of the halving linesearch. Also added some extra function to PDEEuler2D to forward calls that have params. — blsc / detail
  414. Added sourceCoarse and sourceFine function calls to VMSDBR2, which are source terms weighted against the coarse and fine space test functions respectively. For the most part these forward calls to the source function in the PDE. These are required because VMSD does not have a unique solution for the PDE q - a = 0 if a is a constant. Since this is the case in the SourceOnly PDE, that PDE now solves (\bar{q} - a) = 0, and q' = 0. — blsc / detail
  415. Setting up RadialShock problem using VMSDBR2 and Homotopy. This required instantiating objects relating to the Block 2x2 linear algebra for PDEs of dimension 5. It also required adding the new source functions to the Sensor PDE. — blsc / detail
  416. Renamed eLaplaceViscosity to eLaplaceViscosityEnthalpy in enum EulerArtViscosity. This is a more descriptive name for this option: artificial diffusion is applied to the gradient of total enthalpy (not total internal energy as a pure Laplacian operator would suggest). Now the option eLaplaceViscosityEnergy can be added to the enum EulerArtViscosity to describe the artificial diffusion being applied to the conservation variables. — blsc / detail
  417. Upgraded to latest AFLR — galbramc / detail
  418. Added eLaplaceViscosityEnergy to enum EulerArtViscosity. This applies a Laplacian operator to the conservation variable gradient (i.e. energy gradient not enthalpy gradient). System tests have been added to ensure that the calculation is correct for Euler2D and RANSSA2D PDEs. — blsc / detail
  419. Fixed two bugs highlighted by Jenkins. 1) PDELorenz was using abs on a Real. 2) Several lines in SolutionFunction_Euler2D.h were too long. — blsc / detail
  420. Look for Real Time library for AFLR — galbramc / detail
  421. Fix for last commit — galbramc / detail
  422. A few AFLR fixes — galbramc / detail
  423. Previous commits overwrote some updates to the PETSc interface, so had to revert to commit 8fa5bcb008f4c19ec223d6ebfa628f6d4d9354cd for those files. Also updated files that failed vera checks. — blsc / detail
  424. Instantiations for Block2x2 systems for a PDE of 5 equations were missing from MKL. Also, the version of UMFPack on Ubuntu 12.04 does not support the new exception types, so have reverted src/LinearAlgebra/SparseLinAlg/Direct/UMFPACK/UMFPACKSolver.cpp back to commit 45d3cd53036a51bccf943d9c5097544bd220d8f8 — blsc / detail
  425. Relaxed tolerances on JacobianCell_VMSD_BR2_AD_btest for intel. Added #ifdef protection on the new UMFPACk error flags for older versions of UMFPack (pre 5.5) — blsc / detail
  426. Updated BuildBoost to Boost 1.72 — galbramc / detail
  427. Updated AFLR to 16.30.11. Lots of cppcheck fixes. — galbramc / detail
  428. Add missing include — galbramc / detail
  429. Fixes for AFLR4 farfield mesh generation — galbramc / detail
  430. A few nightly fixes — galbramc / detail
  431. Add continuousGlobalMap for LIP solvers — galbramc / detail
  432. Fix the last fix — galbramc / detail
  433. Use CMake python when building boost — galbramc / detail
  434. Fix for gold linker with MKL — galbramc / detail
  435. Some more nightly fixes — galbramc / detail
  436. One more nightly fix — galbramc / detail
  437. CMake fixes for CentOS 8 — galbramc / detail
  438. Relax timing some more — galbramc / detail
  439. Correction for finding boost python — galbramc / detail
  440. Some more time relaxation — galbramc / detail
  441. Look for vera++ on CentOS 8 as well — galbramc / detail
  442. speed up a system test by using a better initial solution — shunz / detail
  443. Boost numpy was added with 1.65 — galbramc / detail
  444. remove some system tests that are no longer essential — shunz / detail
  445. remove more non-essential system test — shunz / detail
  446. remove more non-essential system test — shunz / detail
  447. Check if NLOPT direcfory exists on jenkins node — galbramc / detail
  448. Fix array out of bounds for refine. Fix parallel make for jenkins. — galbramc / detail

#258 (Apr 14, 2020, 8:16:52 AM)

  1. Added variable interpreter for primary unknowns = {delta*, theta, G} — shunz / detail
  2. Refactored IBL profile type identifier — shunz / detail
  3. Added unit tests to VarInterpret — shunz / detail
  4. Fixed unit test — shunz / detail
  5. Added a new class for calculating thicknesses and coeffcients, along with unit tests. — shunz / detail
  6. Typo fixes — shunz / detail
  7. Refactored PDEIBLUniField to use genealized thicknesses/coeffcients calculation routines.  Verified uncoupled IBL run with airfoil only — shunz / detail
  8. Refactoring to get coupled IBLUniField to work without transition.  Caveat: pyrite check is fine with delta & A variables, but mismatches G (maybe numerical precision issue? to be eamined) — shunz / detail
  9. Cleaned up obsolete stuff — shunz / detail
  10. Cleanup — shunz / detail
  11. Renaming/cleanup — shunz / detail
  12. Preliminary implementation of correlation closure — shunz / detail
  13. Minor refactoring — shunz / detail
  14. First run of correlation-closure IBL on an uncoupled airfoil-only case, compared reasonably well with profile-closure results — shunz / detail
  15. minor edit — shunz / detail
  16. Added turbulent closure from MSES paper.  Ran coupled IBL on airfoil+wake configuration, comparing reasonably well with IBL based on profile closures — shunz / detail
  17. Distinguished H from Hk (kinematic). — shunz / detail
  18. Reduced code repetition — shunz / detail
  19. Added some XFOIL closures — shunz / detail
  20. Added more XFOIL closures — shunz / detail
  21. Typo fixes — shunz / detail
  22. Refactored Uslip calculation — shunz / detail
  23. Fixed a typo in xfoil laminar BL closure — shunz / detail
  24. Added pyrite check for XFOIL laminar BL closure — shunz / detail
  25. Recovered the correct double dissipation for wake.  Added pyrite files — shunz / detail
  26. Added output dumping functions for correlation-closure IBL — shunz / detail
  27. Refactored output function and added a utility function — shunz / detail
  28. Added XFOIL amplification growth rate closure, which is almost identical to IBL — shunz / detail
  29. Modified lag equation and CDiss closure a bit. — shunz / detail
  30. With modified lag equation, laminarBL+turbulentWake results matches XFOIL very closely — shunz / detail
  31. Added captured transition test case with pyrite file for correlation-based IBL — shunz / detail
  32. Fixed an innocuous bug — shunz / detail
  33. Re-enabled LF flux — shunz / detail
  34. Added machinery for loading up IBL solution from input file — shunz / detail
  35. Make LF flux a default for IBL — shunz / detail
  36. Refactored blended intermittency calculation for correlation-based closure — shunz / detail
  37. Do no apply blending for wake — shunz / detail
  38. Switched to generalized thickness/coeffcient calculation for duplicate-field IBL as well.  Verified uncoupled airfoil case with full upwind — shunz / detail
  39. Bug fix — shunz / detail
  40. Verified coupled case with laminarBL+turbulentWake — shunz / detail
  41. Minor refactoring — shunz / detail
  42. minor cleanup — shunz / detail
  43. Added instantiation and fixed transition test cases — shunz / detail
  44. Added a missing method — shunz / detail
  45. Added a pyrite check for NACA0012 case (with flow separation) — shunz / detail
  46. Added a different set of initial solution.  Allowed for laminar BL to turn turbulent during transient state — shunz / detail
  47. Added new IBL variable type — shunz / detail
  48. Added unit tests and fixed bugs — shunz / detail
  49. Generalized dummy equations in duplicate-field IBL pde class — shunz / detail
  50. Follow-up fixes for test cases affected by earlier commits — shunz / detail
  51. Refactored solution initialization — shunz / detail
  52. Enabled correlation-based two-field IBL formulation.  Added test case of coupled IBL with lamiBL+turbWake and corresponding pyrite file. — shunz / detail
  53. Refactored updateFraction in PDEIBL and also fixed the sign in solution update — shunz / detail
  54. Generalized cut-cell machinery to handle two different sets of IBL primary unknowns — shunz / detail
  55. Added pyrite check — shunz / detail
  56. Added comments — shunz / detail
  57. Minor refactoring.  Added missing initial solution file — shunz / detail
  58. Intermediate commit — shunz / detail
  59. Cleaned up test cases — shunz / detail
  60. Refactored updateFraction — shunz / detail
  61. Added a pyrite check — shunz / detail
  62. Relaxed tolerance — shunz / detail
  63. Refactoring updateFraction.  Added an expedient guard against too small Hk — shunz / detail
  64. Added underrelaxation — shunz / detail
  65. Added underrelaxation-related stuff — shunz / detail
  66. Cosmetic edtis — shunz / detail
  67. Verified pyrite check for fitted-transition IBL on NACA0012 Re=1e5 massively separated laminar BL — shunz / detail
  68. Added Cf replacement for turbulent BL with too small Retheta — shunz / detail
  69. Added a pyrite file — shunz / detail
  70. Added a pyrite file — shunz / detail
  71. BC refactoring and unit test fix — shunz / detail
  72. Refactored BC and added unit tests — shunz / detail
  73. Improved coverage by removing redundant safety guards — shunz / detail
  74. Just renaming — shunz / detail
  75. Refactoring and unit testing — shunz / detail
  76. Fixed a bug in Cf correlation.  Added unit test — shunz / detail
  77. Type fix — shunz / detail
  78. Unit tested correlations from XFOIL. — shunz / detail
  79. Refactored amplification growth correlation calculation for speedup --> changed the floating-point arithmetic a bit  Added unit tests. — shunz / detail
  80. added comments — shunz / detail
  81. Cleanup — shunz / detail
  82. Cleanup — shunz / detail
  83. Dump additional output files for examination — shunz / detail
  84. Unit test fixes — shunz / detail
  85. More unit test fixes — shunz / detail
  86. Unit test fix — shunz / detail
  87. Refactored blended intermittency calculation and added unit tests — shunz / detail
  88. Refactored updateFraction and added unit tests — shunz / detail
  89. minor fixes — shunz / detail
  90. matching old system pyrite test: coupled IBLUniField profile-closure lamiBL+turbWake — shunz / detail
  91. Changed initial solution guess — shunz / detail
  92. Bug fix.  Equality operator is sensitive to type: std::string vs its reference. — shunz / detail
  93. Minor refactoring — shunz / detail
  94. Added comments — shunz / detail
  95. Refactored unit tests — shunz / detail
  96. Refactored source terms and added unit tests for PDEIBL2D — shunz / detail
  97. Refactored ctau_{turb,init}.  Unit tested turbulent sub-cell source term for amplification eqn in cut-cell transition formulation — shunz / detail
  98. Fix for vera formatting check.  Also a minor refactoring — shunz / detail
  99. Minor refactoring — shunz / detail
  100. Refactored ctau_{turb,init} fitting calculation — shunz / detail
  101. Forgot to save  this in the last commit... — shunz / detail
  102. Unit-tested upwind advective flux in two-fIeld IBL pde class — shunz / detail
  103. Minor commenting — shunz / detail
  104. Minor refactoring — shunz / detail
  105. minor refactoring — shunz / detail
  106. Refactored dummy matching equations for fitted transition — shunz / detail
  107. Forgot to commit this in the last pass — shunz / detail
  108. Modified artificial amplification source term in fully turbulent elements.  Pluse other minor refactoring — shunz / detail
  109. Make sure scales are non-negative — shunz / detail
  110. Enabled G=ln(ctau^0.5) as a primary unknown in place of ctau.  It helps with nonlinear solution. — shunz / detail
  111. Fixed unit tests — shunz / detail
  112. Dumping matching variables for transition — shunz / detail
  113. Refactored underrelaxation to guard against zero G.  Added forced-transition subiteration output dump — shunz / detail
  114. Turned off limiting on G variable.  Made H validity check tighter — shunz / detail
  115. Playing with a different form of lag equation in fitted transition approach.  Not much luck though.  So, as of now, using G as the primary unknown is already helpful — shunz / detail
  116. Playing with point source for setting ctau_{Turb,init} — shunz / detail
  117. Refactored forced transition point source for ctau jump — shunz / detail
  118. playing with point source for ctau jump in free transition — shunz / detail
  119. Tried implementing ctau jump condition via flux modification — shunz / detail
  120. Got a captured transition result with sharp ctau jump at free transition front — shunz / detail
  121. Added explicit instantiation — shunz / detail
  122. Genearalized HubTrace boundary trace integrand by ridding of any PDE/BC dependence — shunz / detail
  123. Generalized IBL solution DOF setter — shunz / detail
  124. Implemented a different formulation for captured transition by splitting the amplification and lag equations — shunz / detail
  125. Added instantiations — shunz / detail
  126. Fixed amplification and lag source terms in new IBL PDE class — shunz / detail
  127. Verified NACA0012 Re1e5 results against XFOIL (separated fully laminar BL) — shunz / detail
  128. Add a lower limit to the modeled turbulent initial ctau — shunz / detail
  129. Minor refactoring — shunz / detail
  130. Fixed a bug in solution initialization — shunz / detail
  131. Refactored masterState calculation from cumulation to assignment — shunz / detail
  132. minor tidying — shunz / detail
  133. Refactored smooth intermittency blending to allow for natural and forced transition as the same time — shunz / detail
  134. Allowed for initializing p0 IBL solution from input file — shunz / detail
  135. Added H upper limit in validity check — shunz / detail
  136. SplitAmpLag working on NACA0012 Re 2e5 separation bubble — shunz / detail
  137. Cosmetic edit — shunz / detail
  138. Decoupled nt variables of BL from nt of the wake — shunz / detail
  139. Converged p=0 solution on ne64 and n128 grids for Eppler 387 case — shunz / detail
  140. minor cleanup — shunz / detail
  141. renaming — shunz / detail
  142. Refactored state validity check — shunz / detail
  143. minor refactoring — shunz / detail
  144. Added IO files for testing Eppler 387 airfoil — shunz / detail
  145. Typo fix — shunz / detail
  146. Tried PTC for IBLSplitAmpLag captured transition case — shunz / detail
  147. Further simplified amplification equation at hubtrace — shunz / detail
  148. Added grid and initial solution files — shunz / detail
  149. minor cleanup — shunz / detail
  150. added hessian to Joukowski solution — allmaras / detail
  151. bug fix in Joukowski test — allmaras / detail
  152. Minor edit — shunz / detail
  153. Refactored a case — shunz / detail
  154. Fixed calls to jacobianTranspose of daisy-chained algebraic equation set — shunz / detail
  155. Cleanup — shunz / detail
  156. minor refactoring — shunz / detail
  157. minor edit to running case — shunz / detail
  158. Refactored printed normed reisudals when line-search fails. — shunz / detail
  159. Refactored running case — shunz / detail
  160. Minor cleanup — shunz / detail
  161. Minor fix — shunz / detail
  162. Refactored uncoupled IBL case and added pyrite file — shunz / detail
  163. Fixed HDG continuous implementation.  Reverted to Var(delta, A, G) to not hacking scaling delta and A.  Cleaned up some system tests — shunz / detail
  164. Refactored two test cases — shunz / detail
  165. Added Hk lower limit check when checking state validity for IBLUniField with correlation closures — shunz / detail
  166. Added pyrite check file.  Refactored test cases and enabled PTC on one of them. — shunz / detail
  167. Fix pyrite check — shunz / detail
  168. Fixed undefined variables — shunz / detail
  169. Updated a pyrite file to be consistent with the latest settings in IBLUniField — shunz / detail
  170. Deleted a redundant case — shunz / detail
  171. added some commented out hack for fully turbulent BL simulation with IBLUniField — shunz / detail
  172. Updated pyrite file — shunz / detail
  173. Added exceptions as safe guards — shunz / detail
  174. cosmetic refactoring — shunz / detail
  175. cosmetic refactoring — shunz / detail
  176. Added a pyrite file and changed test file name — shunz / detail
  177. turned on set IBL dofs for p=0 for DsThG — shunz / detail
  178. Dumped singular jacobian when UMFPACK finds it — shunz / detail
  179. Refactored system test cases — shunz / detail
  180. Using a less conservative initial CFL for PTC in a test case — shunz / detail
  181. Refactored system test case — shunz / detail
  182. Added some auxiliary functions for system test cases — shunz / detail
  183. Added some debugging options — shunz / detail
  184. Minor refactoring — shunz / detail
  185. Simplified upwind flux in IBL to improve code reuse — shunz / detail
  186. Commented out hacks.  Added minor guards.  Dumped matrix when UMFPACK linear solve fails. — shunz / detail
  187. Laminar-turbulent blending works for Eppler 387 now.  Turned on G limiting in updateFraction — shunz / detail
  188. Cleaned up and refactored projection to Qauxi — shunz / detail
  189. Removed redundant TopoDim templates following Hugh's recent updates — shunz / detail
  190. playing with numerical flux and nt growth rate in laminar-turbulent blending formulation — shunz / detail
  191. Playing with various grid-dependent laminar-turbulent blending strategies — shunz / detail
  192. minor cleanup — shunz / detail
  193. Use value instead of reference since equivalence is checked instead of identity — shunz / detail
  194. Added output — shunz / detail
  195. Tweaked LF flux dissipation coefficient a bit.  Modified lag source term to prevent ctau to drop with ctau_Tinit after reaching its peak.  Hacking grid dependent blending.  Left system test case unchecked for the moment — shunz / detail
  196. Added Hs derivatives with unit tests.  Fixed typos in closure unit tests — shunz / detail
  197. Abstracted Re_theta calculation — shunz / detail
  198. Added Roe flux based on arithmetic average state — shunz / detail
  199. Added class for setting qaux field from file — shunz / detail
  200. Typo fix — shunz / detail
  201. Minor refactoring — shunz / detail
  202. Output blended IBL quantities — shunz / detail
  203. Added an uncoupled IBL case — shunz / detail
  204. Added qinif initialization to a shared file for setting up IBL case — shunz / detail
  205. Using qinf initialization from a shared file — shunz / detail
  206. Refactored Roe flux for IBL — shunz / detail
  207. Added entropy fix — shunz / detail
  208. Just hacking around.  The hacky stuff are turned off — shunz / detail
  209. Reformulated DG-IBL interface flux and finally fixed solution oscillation in transition cases.  Saved other miscellaneous updates — shunz / detail
  210. cosmetic changes (with hacks being commented out) — shunz / detail
  211. Normalize KE equation by q^2 — shunz / detail
  212. editted comments — shunz / detail
  213. Use pde fluxAdvective function to calculate outflow flux at Hubtrace boundary — shunz / detail
  214. cleaned up some hacks — shunz / detail
  215. minor cleanup — shunz / detail
  216. Accidentally messed up blended source term.  Restore it now. — shunz / detail
  217. Stashed some intermediate edits — shunz / detail
  218. Fixed the numerical flux of IBL momentum equations to eliminate solution jumps and/or oscillations.  Also cleaned up temporary hacks. — shunz / detail
  219. Make intermittency length scale a parameter in the transition model.  Cleaned up old hacks in in PDEIBLSplitAmpLag2D — shunz / detail
  220. More cleanup — shunz / detail
  221. minor edits — shunz / detail
  222. Disable search for boost-cmake; otherwise, runs into conflicts with FindBoost.  Need to resolve this if using boost-cmake in the future — shunz / detail
  223. Minor cleanup following last merge commit — shunz / detail
  224. Minor fixes to keep up with changes in the main branch — shunz / detail
  225. Add pyrite check on E387 airfoil transition separation bubble case — shunz / detail
  226. Update Solve2D_Coupled4x4_IBLSplitAmpLag_CorrelationClosure_CapturedTransition_PTC_btest.cpp — shunz / detail
  227. Cleaned up the numerical flux options in Qauxi projection.  All three numerical fluxes produce similar well-behaved results.  Add a sandbox case — shunz / detail
  228. working on advective field case... — cfrontin / detail
  229. asdfasdf — cfrontin / detail
  230. working on the advective field and it's broken LOL — cfrontin / detail
  231. fix mpi dg — cfrontin / detail
  232. trying to figure out idiosyncracy — cfrontin / detail
  233. cont'd — cfrontin / detail
  234. cont'd pt. ii — cfrontin / detail
  235. name fix — cfrontin / detail
  236. oopsie — cfrontin / detail
  237. working on random field — cfrontin / detail
  238. updated random fields, should be working but untested. — cfrontin / detail
  239. unit tests for adjoint — arthuang / detail
  240. fixes to compute AR etc. — hcarson / detail
  241. Fix for EPIC 2D without geometry — galbramc / detail
  242. jenkins fix, holdover code. — cfrontin / detail
  243. adding block pivoting to ilu — arthuang / detail
  244. a VMSDBR2 version of the DeltaWing Chain toy — hcarson / detail
  245. Enable static condensation with MKL — galbramc / detail
  246. Missed a static condensation step — galbramc / detail
  247. Another MKL static condensation fix — galbramc / detail
  248. Relaxed tolerance — galbramc / detail
  249. a VMSDBR2 Double BL, also lining up the 3 so that they are the same. HOWEVER, Seems to be something very wrong with plain VMSD, the adapt looks crap and the error is enormous.... — hcarson / detail
  250. Updates for latest refine — galbramc / detail
  251. urop fix? — cfrontin / detail
  252. jenkins fix, odds and ends. — cfrontin / detail
  253. added 2D+T VMSD AD case. — cfrontin / detail
  254. minor edit — shunz / detail
  255. refactored the new PDE IBL class and added unit tests — shunz / detail
  256. fixed LF flux — shunz / detail
  257. Relocated blended intermittency to PDE class.  Added unit tests. — shunz / detail
  258. Added unit tests to VarInterpret — shunz / detail
  259. Fixed intermittency usage in auxi equation — shunz / detail
  260. refactored intermittency calculation calling signature across different variants of IBL formulations — shunz / detail
  261. Fixed type — shunz / detail
  262. Refactored unit tests to keep up with updates in the thickness class — shunz / detail
  263. Cleaned up manifold interface integrand implementation.  Minor type corrections for unit tests involving Surreal types. — shunz / detail
  264. Fixed ping tests by adjusting the reference solution and step size — shunz / detail
  265. Refactored  PDEIBLSplitAmgLag2D default flux and ctau_min.  Added pyrite check files — shunz / detail
  266. updated pyrite files — shunz / detail
  267. Refactored IBL solution file reader.  Cleaned up system tests for various IBL formulations — shunz / detail
  268. Removed IO file clutter — shunz / detail
  269. Added variable data constructors.  Fixed types.  File cleanup — shunz / detail
  270. Fixed IBL solution reader usage — shunz / detail
  271. Recovered a system test on IBLUniField — shunz / detail
  272. Cleaned up system tests — shunz / detail
  273. Fixed IBL solution reader usage — shunz / detail
  274. Fixed duplicate symbols by inline.  Added a missing pyrite check file — shunz / detail
  275. Relaxed pyrite tolerance.  Fixed unit tests for IBL soluton file reader — shunz / detail
  276. Suppressed file output for Jenkins — shunz / detail
  277. Suppressed one more file output for Jenkins. — shunz / detail
  278. Fixed unused variable — shunz / detail
  279. Relaxed pyrite tolerances for gnu — shunz / detail
  280. Subtle typo in pyrite filename — shunz / detail
  281. Relaxed tolerances for intel compilers — shunz / detail
  282. Relaxed pyrite tolerance.  Added explicit instantiation to fix linker error — shunz / detail
  283. Relaxed tolerance. Fixed timeout on Jenkins — shunz / detail
  284. Relaxed pyrite tolerances — shunz / detail
  285. relaxed tolerance on d/dxdy test — allmaras / detail
  286. Replace Joukowski q1 grid — galbramc / detail
  287. coverage improvement — cfrontin / detail
  288. hotfix — cfrontin / detail
  289. quick fix — cfrontin / detail
  290. Attempt to use parallel MKL (does not work yet). Other small cleanups. — galbramc / detail
  291. Added cartesian table lookup for PorusMedia SPE calculations — galbramc / detail
  292. Use atlas blas on rhel7 — galbramc / detail
  293. 2d+t hex solve patch. — cfrontin / detail
  294. belated nomenclature fix — cfrontin / detail
  295. Consistent delete — galbramc / detail
  296. VMSDBR2 3D+T additions. — cfrontin / detail
  297. added squarechannel vmsd br2 changes — cfrontin / detail
  298. General PETSc verson on macOZ for jenkins — galbramc / detail
  299. Suppress tetgen CMake warning. Relax tolerance for macOS — galbramc / detail
  300. Allow MKL as BLAS library. Update macOS PETSc. Fix tolerance. — galbramc / detail
  301. Add option to dump per rank matrix market file from PETSc — galbramc / detail
  302. 1st crack at SPE10 test case; compiles but errors out when run; — allmaras / detail
  303. unit tests for PorosityModel_CartTable — allmaras / detail
  304. unit tests for Porosivity and Permeability — allmaras / detail
  305. Fix for PETSc matrix market dump — galbramc / detail
  306. bug fixes in 2-phase porous flow classes/tests; added CartTable unit tests for PDETwoPhase2D — allmaras / detail
  307. updated SPE10 test case to include lookup poro/perm tables; BCs now complaining about CartTable — allmaras / detail
  308. reverted to original functionality on fluxAdvectiveUpwind: no-op rather than developer exception; — allmaras / detail
  309. added "#include <fstream>" in lookup table tests — allmaras / detail
  310. SPE10 testcase: added avro include files and check on SANS_AVRO — allmaras / detail
  311. cppcheck fixes — galbramc / detail
  312. Jenkins updates — galbramc / detail
  313. Added Kyle Anderson k-ordering to PETSc — galbramc / detail
  314. Another jenkins update — galbramc / detail
  315. Fix warnings — galbramc / detail
  316. vmsd sip -> vmsd br2 in sandbox — cfrontin / detail
  317. Update CMake build to Nlopt 2.6.1 — galbramc / detail
  318. SPE10 testcase: added needed instantiations for BC parameters, algebraic eq set, error estimates — allmaras / detail
  319. more vmsd sip -> vmsd br2 in sandbox — cfrontin / detail
  320. Fix k-ordering — galbramc / detail
  321. Fix for k-ordering with BAIJ PETSc matrices — galbramc / detail
  322. fixed typo in comments; no change in functionality — allmaras / detail
  323. SPE10 testcase: fixed typos/bugs in instantiations — allmaras / detail
  324. SPE10: changed avro check to BOOST_FAIL, so code always compiles even if USE_AVRO not defined — allmaras / detail
  325. Implemented refine 2D API interface — galbramc / detail
  326. SPE10: generalized output functional to sum over a vector of outflow wells — allmaras / detail
  327. SPE10: added multiple wells to output functional — allmaras / detail
  328. SPE10: trying to achieve successful compile when SANS_AVRO not defined — allmaras / detail
  329. SPE10: added checks on porosity & permeability table lookups — allmaras / detail
  330. Upgrade ccache version — galbramc / detail
  331. vmsd -> sip again — cfrontin / detail
  332. 2D refine updates to swork with CAD. Not done yet. — galbramc / detail
  333. Fix compile error — galbramc / detail
  334. Suppress some cppcheck warnings — galbramc / detail
  335. Tweak for jenkins Commit script — galbramc / detail
  336. less sharp exact soln, BR2 not SIP — cfrontin / detail
  337. and output fix — cfrontin / detail
  338. eliminated option to use single/scalar source to initialize OutputTwoPhase2D_Flowrate; — allmaras / detail
  339. added test for 1x1 constant lookup table — allmaras / detail
  340. typo fix in output functional source class name (SourceClass -> SourceOutflowClass) — allmaras / detail
  341. another intel suppression for valgrind — galbramc / detail
  342. cppcheck suppression — galbramc / detail
  343. Added a scaling factor to PermeabilityModel2D_CartTable to fix units in SPE10 case. Added rock compressibility to PorosityModel_CartTable, and updated unit tests. Added phi, Kxx, and Kyy as derived quantities to PDETwoPhase2D for visualization. Added table look-up files with homogeneous data for SPE10. — savithru / detail
  344. Fixed unused variable warning — savithru / detail
  345. forcing function adjustment... not improved :( — cfrontin / detail
  346. Update for latest refine — galbramc / detail
  347. SingularException destructor instantiation — galbramc / detail
  348. Rename BCEulermitAVDiffusion to BCEulermitAVSensor since the name makes more sense — blsc / detail
  349. First pass at including artificial viscosity model from Holst (2020) — blsc / detail
  350. GCC9 caught some unitialized data — blsc / detail
  351. A few bugs — blsc / detail
  352. Unit tests and associated bug fixes — blsc / detail
  353. Fix library ordering for HSM — galbramc / detail
  354. Updated gcc warning regex — galbramc / detail
  355. Increase timout times — galbramc / detail
  356. Slight correction to refine unit test — galbramc / detail
  357. Updates for refine incliding 2D triangle hack. Still need help from Mike. — galbramc / detail
  358. Dissable refine 2D test — galbramc / detail
  359. Refine now works in 2D — galbramc / detail
  360. Add restart interface for refine — galbramc / detail
  361. Increase timeour for refine2D tests — galbramc / detail
  362. Use MPI_sleep for avro execution — galbramc / detail
  363. Only write EGADS file from one processor and reduce iterations in refine2D_btest — galbramc / detail
  364. Add missing include — galbramc / detail
  365. Relax refine timie a bit more — galbramc / detail
  366. Add missing link library — galbramc / detail
  367. refine2D with EGADS still does not quite work. — galbramc / detail
  368. Fix for parallel 2D refine — galbramc / detail
  369. One more refine fix — galbramc / detail
  370. Only remove files on the rank 0 processor — galbramc / detail
  371. Warning fixes — galbramc / detail
  372. Fix up Box Tet WakeCut for adjoint — galbramc / detail
  373. Added Ismail-Roe entropy conservative flux (with optional entropy fix based on Harten) in 2D. Unit tested to ensure: primal and entropy consistency for the entropy conservative formulation, primal consistency and entropy dissipation for version with entropy fix. Extension to RANSSA NOT implemented. — blsc / detail
  374. Added header: src/pde/NS/Roe.h to src/pde/NS/IsmailRoe.h to it can access datatype: RoeEntropyFix — blsc / detail
  375. Typo fix in enum RoeEntropyFix: eIsmailRoeEntopyNeutral -> eIsmailRoeEntropyNeutral — blsc / detail
  376. Added SPE10 permeability datasets with reduced contrast ratios — savithru / detail
  377. Updated quarter five spot case to use avro — savithru / detail
  378. lorenz building, not converging. need unit tests. — blsc / detail
  379. in progress... — blsc / detail
  380. lorenz in progress, not converging, seems to need stabilization. — blsc / detail
  381. working on vmsd. — blsc / detail
  382. added DG, broken. now VMSD and DGBR2 are both broken and CG is unstable :) — blsc / detail
  383. more of the same. — blsc / detail
  384. made some fixes, fem of lorenz seems to be working (w/ 4M elements...) — blsc / detail
  385. trying to figure out what's wrong — blsc / detail
  386. unit test addition.. — blsc / detail
  387. hmm looking for valgrid shit now. — blsc / detail
  388. added exact solution for alpha=0 case. — blsc / detail
  389. configured for convergence test, convergent. — blsc / detail
  390. output tricks — blsc / detail
  391. working on homotopy pde — blsc / detail
  392. for marshall — blsc / detail
  393. Some progress for BCHomotopy — blsc / detail
  394. homotopy in progress (still) — blsc / detail
  395. on the way to a block 2x2 version of htc... — blsc / detail
  396. slow but steady. — blsc / detail
  397. on the curve between the easy solution and the hard one — blsc / detail
  398. bob loblaw law blog — blsc / detail
  399. homotopy might be working might be leaking might be a figment of my imagination. — blsc / detail
  400. fieldbase uninitialized data fix. — blsc / detail
  401. homotopy running but breaking for chaos :( — blsc / detail
  402. added dumps — blsc / detail
  403. fixed homotopy bug i think. — blsc / detail
  404. added adaptive stepping to homotopy. — blsc / detail
  405. ready for ben — blsc / detail
  406. state of the art — blsc / detail
  407. small changes. — blsc / detail
  408. Removed PDE template from BCLorenz since it was no longer needed. Generalized the new homotopy integrand so it can be applied to Real and VectorS PDE::ArrayQ types. Updates required adding move construction and move assignment operator to VectorBlock_2 to prevent warnings about using implicit constructors under g++9. Propogated the required changes to unit test and sandbox cases. — blsc / detail
  409. Statically condensed VMSD with homotopy: Updated the jacobian functions in the the HTC algebraic equation set, added logic for static condensation to Block 2x2 matrix interface with UMFPACK, and also had to expose the types of the vectors in VectorBlock_2. Also updated the Homotopy logic to be more robust, which mostly consists of making sure steps taken in the predictor phase are valid. — blsc / detail
  410. Added ability to pass q and qp into source term individually for VMSDBR2. This is needed for some of the resolution sensors I am experimenting with for shock capturing. This required an additional source function to be added to PDEs that takes q, qp, gradq, and gradqp. Currently, this new function forwards (q+qp) and (gradq+gradqp) to the original source function. Unit tests have been added to test consistency of this new source term. — blsc / detail
  411. Added new boundary condition: BCTypeFullStateRadialInflow_mitState. This is a FullState_mitState style boundary condition, except velocity magnitude is specified. The direction is then calculated as radially outward from an origin at (0,0). — blsc / detail
  412. Added PDESourceOnly2D which implements a pde q - a = 0. This is for use as the auxiliary equation for Homotopy continuation. Unit tests added to applying this PDE to adevction diffusion, Euler and Euler with artificial diffusion. Also found that the jacobianMasterState and jacobianFluxAdvectveTime functions were reversed for the sensor PDE. This has been fixed and unit tests updated. — blsc / detail
  413. Setting up a bump in a subsonic inviscid flow. Now verbose enables / disables all console output of the halving linesearch. Also added some extra function to PDEEuler2D to forward calls that have params. — blsc / detail
  414. Added sourceCoarse and sourceFine function calls to VMSDBR2, which are source terms weighted against the coarse and fine space test functions respectively. For the most part these forward calls to the source function in the PDE. These are required because VMSD does not have a unique solution for the PDE q - a = 0 if a is a constant. Since this is the case in the SourceOnly PDE, that PDE now solves (\bar{q} - a) = 0, and q' = 0. — blsc / detail
  415. Setting up RadialShock problem using VMSDBR2 and Homotopy. This required instantiating objects relating to the Block 2x2 linear algebra for PDEs of dimension 5. It also required adding the new source functions to the Sensor PDE. — blsc / detail
  416. Renamed eLaplaceViscosity to eLaplaceViscosityEnthalpy in enum EulerArtViscosity. This is a more descriptive name for this option: artificial diffusion is applied to the gradient of total enthalpy (not total internal energy as a pure Laplacian operator would suggest). Now the option eLaplaceViscosityEnergy can be added to the enum EulerArtViscosity to describe the artificial diffusion being applied to the conservation variables. — blsc / detail
  417. Upgraded to latest AFLR — galbramc / detail
  418. Added eLaplaceViscosityEnergy to enum EulerArtViscosity. This applies a Laplacian operator to the conservation variable gradient (i.e. energy gradient not enthalpy gradient). System tests have been added to ensure that the calculation is correct for Euler2D and RANSSA2D PDEs. — blsc / detail
  419. Fixed two bugs highlighted by Jenkins. 1) PDELorenz was using abs on a Real. 2) Several lines in SolutionFunction_Euler2D.h were too long. — blsc / detail
  420. Look for Real Time library for AFLR — galbramc / detail
  421. Fix for last commit — galbramc / detail
  422. A few AFLR fixes — galbramc / detail
  423. Previous commits overwrote some updates to the PETSc interface, so had to revert to commit 8fa5bcb008f4c19ec223d6ebfa628f6d4d9354cd for those files. Also updated files that failed vera checks. — blsc / detail
  424. Instantiations for Block2x2 systems for a PDE of 5 equations were missing from MKL. Also, the version of UMFPack on Ubuntu 12.04 does not support the new exception types, so have reverted src/LinearAlgebra/SparseLinAlg/Direct/UMFPACK/UMFPACKSolver.cpp back to commit 45d3cd53036a51bccf943d9c5097544bd220d8f8 — blsc / detail
  425. Relaxed tolerances on JacobianCell_VMSD_BR2_AD_btest for intel. Added #ifdef protection on the new UMFPACk error flags for older versions of UMFPack (pre 5.5) — blsc / detail
  426. Updated BuildBoost to Boost 1.72 — galbramc / detail
  427. Updated AFLR to 16.30.11. Lots of cppcheck fixes. — galbramc / detail
  428. Add missing include — galbramc / detail
  429. Fixes for AFLR4 farfield mesh generation — galbramc / detail
  430. A few nightly fixes — galbramc / detail
  431. Add continuousGlobalMap for LIP solvers — galbramc / detail
  432. Fix the last fix — galbramc / detail
  433. Use CMake python when building boost — galbramc / detail
  434. Fix for gold linker with MKL — galbramc / detail
  435. Some more nightly fixes — galbramc / detail
  436. One more nightly fix — galbramc / detail

#257 (Dec 7, 2019, 1:52:07 AM)

  1. unit tests for adjoint — arthuang / detail
  2. Fix for EPIC 2D without geometry — galbramc / detail
  3. adding block pivoting to ilu — arthuang / detail
  4. a VMSDBR2 version of the DeltaWing Chain toy — hcarson / detail
  5. Enable static condensation with MKL — galbramc / detail
  6. Missed a static condensation step — galbramc / detail
  7. Another MKL static condensation fix — galbramc / detail
  8. Relaxed tolerance — galbramc / detail
  9. Updates for latest refine — galbramc / detail

#256 (Nov 16, 2019, 1:52:07 AM)

  1. Updates to DGBR2 RANS Joukowski — arthuang / detail
  2. mod to wbwt solve — arthuang / detail
  3. mods to toy — arthuang / detail
  4. longer time scale — arthuang / detail
  5. mods — arthuang / detail
  6. change filenames — arthuang / detail
  7. unit test — arthuang / detail
  8. Delta wing updates — galbramc / detail
  9. sandbox tweak — arthuang / detail
  10. change loops — arthuang / detail
  11. tweaks — arthuang / detail
  12. mod flat plate — arthuang / detail
  13. changed nThread back to 2 — arthuang / detail
  14. a little bit faster — arthuang / detail
  15. should be a little faster? — arthuang / detail
  16. adding u' on boundaries, new SIP parameter — arthuang / detail
  17. weakening nitsche parameter — arthuang / detail
  18. minor changes — arthuang / detail
  19. put some estuff back — arthuang / detail
  20. commit sandbox case — arthuang / detail
  21. couple more tweaks — arthuang / detail
  22. updating linear VMSD — arthuang / detail
  23. adding vmsd0 sandbox — arthuang / detail
  24. playing with adjoint SIP order — arthuang / detail
  25. trying to get vmsd0 up — arthuang / detail
  26. BR2 is not working yet — arthuang / detail
  27. vmsd w BR2 is working.. primal and adjoint look ok? error estimates questionable — arthuang / detail
  28. fixed unintializd data — arthuang / detail
  29. error estimates working! — arthuang / detail
  30. stuff is working.. pushing to hypersonic — arthuang / detail
  31. pushing to laptopt — arthuang / detail
  32. add sandbox case — arthuang / detail
  33. putting pseudotime on q' field — arthuang / detail
  34. hacks to do PTC on q' field — arthuang / detail
  35. should be working? — arthuang / detail
  36. updates to use pseudotime on q' field — arthuang / detail
  37. vmsdbr2 RANS solve — arthuang / detail
  38. check nonlinear residuals separately — arthuang / detail
  39. fixed vera — arthuang / detail
  40. boundary lifting operators working... but why is it so slow? — arthuang / detail
  41. speedups for VMSD — arthuang / detail
  42. adding pseudotime function hooks to VMSD0 — arthuang / detail
  43. oh shoot VMSD0 is working? — arthuang / detail
  44. whoops need some stuff back — arthuang / detail
  45. reverting a bunch of things, bug fix for the ptc — arthuang / detail
  46. no idea why this works.. must be something to do with eta? — arthuang / detail
  47. q' is on the boundaries and that seems to work better. slow though! — arthuang / detail
  48. playing with eta — arthuang / detail
  49. found nasty bug — arthuang / detail
  50. VMSDflatplate — arthuang / detail
  51. parallel bug — arthuang / detail
  52. RANS test cases — arthuang / detail
  53. joukowski cases — arthuang / detail
  54. darmo wants more alfa — arthuang / detail
  55. ok last tweak — arthuang / detail
  56. hemisphere cylinder... lets see how this goes — arthuang / detail
  57. commented out developer exception for reflectBC — arthuang / detail
  58. tuning down stabilization to reasonable levels — arthuang / detail
  59. ok i think things are working... — arthuang / detail
  60. edits to epic script — arthuang / detail
  61. sandbox tweaks — arthuang / detail
  62. pushing to hypersonic again.. some bug fixes for teh non-br2 — arthuang / detail
  63. different way to use memory? — arthuang / detail
  64. hemisphere cylinder fixed grid test case — arthuang / detail
  65. vmsd hemisphere-cylinder — arthuang / detail
  66. tweaks to hemispherecylinder case — arthuang / detail
  67. revert pseudotime not to use qpfld (for memory savings) — arthuang / detail
  68. added extra dual consistency term to boundary — arthuang / detail
  69. finished up extra BC term — arthuang / detail
  70. tweak pseudotime to pass integrand into VMSD Jacobian (saves memory) — arthuang / detail
  71. whoops forgot one — arthuang / detail
  72. hemisphere cylinder is working! — arthuang / detail
  73. modifications to hemisphere-cylinder — arthuang / detail
  74. playing w gmres — arthuang / detail
  75. tweaks to sandbox — arthuang / detail
  76. added restart to 3d hemishpere cylinder — arthuang / detail
  77. ojeda adapts — arthuang / detail
  78. dg adapt ojeda change projector — arthuang / detail
  79. dg hemisphere-cylinder — arthuang / detail
  80. corner flat plate adapts — arthuang / detail
  81. run mods for flat plate — arthuang / detail
  82. forgot cmakelist — arthuang / detail
  83. switch flat plate side — arthuang / detail
  84. hypersonic sandbox — arthuang / detail
  85. add corner flat plates — arthuang / detail
  86. fixes to work with hugh's push, also a little fixup for pseudotime — arthuang / detail
  87. get rid of unneeded jacobians — arthuang / detail
  88. most things compile..? — arthuang / detail
  89. maybe this will get through Jenkins??? — arthuang / detail
  90. vera bracket thing — arthuang / detail
  91. change btest name — arthuang / detail
  92. another btest name change — arthuang / detail
  93. using new boundary lifting field to save memory — arthuang / detail
  94. forgot some files — arthuang / detail
  95. fixed up unit tests? — arthuang / detail
  96. Fixes for FieldLift_DG_BoundaryTrace — galbramc / detail
  97. propagating to 3D — arthuang / detail
  98. added fieldlocal for lifted boundarytrace — arthuang / detail
  99. Fix for FieldLiftBoundary_Local — galbramc / detail
  100. seems like things are working? — arthuang / detail
  101. tweak for volumes — arthuang / detail
  102. found uninitialized data? — arthuang / detail
  103. last btest? — arthuang / detail
  104. add new stabilized Galerkin HC solve — arthuang / detail
  105. added dofweighted norm to stabilized galerkin — arthuang / detail
  106. i think thats it for the unit tests? — arthuang / detail
  107. supg ojeda — arthuang / detail
  108. turn off file dump — arthuang / detail
  109. updating non-static condensed versions of VMSD — arthuang / detail
  110. forgot a file — arthuang / detail
  111. Minimum 4x4 mesh for ErrorEstimateOrder_2D_CG_Nodal_Triangle_AD_btest — galbramc / detail
  112. Fix uninitialized test data — galbramc / detail
  113. Added a Field/Basis equivelncy test for VMDBR2 — galbramc / detail
  114. GLS should be a bit faster — arthuang / detail
  115. some tweaks to gls — arthuang / detail
  116. tweaks to the sandbox case too — arthuang / detail
  117. Nightly fixes — galbramc / detail
  118. added velocity squared output — arthuang / detail
  119. forgot curly brace — arthuang / detail
  120. ok now it should be right — arthuang / detail
  121. ojeda bump update to V2 output — arthuang / detail
  122. missed a /rho — arthuang / detail
  123. Remove EPIC projection for Q1 geometry — galbramc / detail
  124. Added LGMRES PETSc option — galbramc / detail
  125. Logic fix for EPIC when using Q1 grids — galbramc / detail
  126. one bug found? — arthuang / detail
  127. fixed bubble mode issue for boundary outputs.. turned off LO contribution to boundary error for now. still stuff to figure out — arthuang / detail
  128. don't project adjoint — arthuang / detail
  129. added missing LO volume term in boundary error estimates — arthuang / detail
  130. updates to solverinterface to subtract off p LO — arthuang / detail
  131. get rid of whitespace — arthuang / detail
  132. fixing up unit test — arthuang / detail
  133. Fix for nightly — galbramc / detail
  134. Added a more unit tests. Still a bug in the linearization — galbramc / detail
  135. Another attempt at nightly fix — galbramc / detail
  136. found bug in uncondensed Jacobian — arthuang / detail
  137. Cleaned up some unnecessary includes — galbramc / detail
  138. change btest name — arthuang / detail
  139. add static condense equivalency unit test — arthuang / detail
  140. got rid of unused typedefs — arthuang / detail
  141. fixed uninitialized data — arthuang / detail
  142. Solution transfer error check — galbramc / detail

#254 (Oct 26, 2019, 1:52:09 AM)

  1. added expanding spherical wave trueoutput via numerical integration in wolfram — cfrontin / detail
  2. mega'd up the Adapt2D RAE case — cfrontin / detail
  3. fix dgbr2? — cfrontin / detail
  4. fix dgbr2 adapt! — cfrontin / detail
  5. fix filenam convention. — cfrontin / detail
  6. fixed fielname — cfrontin / detail
  7. shift to unstab CG — cfrontin / detail
  8. dg error model fix. — cfrontin / detail

#253 (Oct 19, 2019, 1:52:11 AM)

  1. use LocalPatch — hcarson / detail
  2. checking for nans and filling the interior trace groups — hcarson / detail
  3. checking for nans and filling the interior trace groups — hcarson / detail
  4. merge con — hcarson / detail
  5. accidental mangle — hcarson / detail
  6. undoing some stupid errors and also setting the PETSc params correctly... — hcarson / detail
  7. merge con — hcarson / detail
  8. a fixed DOF DG case — hcarson / detail
  9. tweaks to start from relatively fine grids — hcarson / detail
  10. tweak — hcarson / detail
  11. use a coarse grid as a preconditioned solve — hcarson / detail
  12. check for nans in the resid norm check — hcarson / detail
  13. bug fix, make sure that the minimum line search step is still valid — hcarson / detail
  14. rescale the norm — hcarson / detail
  15. pre merge — hcarson / detail
  16. trying to set up some try catch — hcarson / detail
  17. added a P1 projection fall back if the solve fails. If even that doesn't work, try uniform freestream — hcarson / detail
  18. added the try catch solve — hcarson / detail
  19. pre merge — hcarson / detail
  20. removed the DOF scaling. Just gonna just P1 initial guesses and go from there — hcarson / detail
  21. the normalization is back on, lowered the tolerance, and made the initial guesses based on P1 always. — hcarson / detail
  22. the normalization is back on, lowered the tolerance, and made the initial guesses based on P1 always. — hcarson / detail
  23. scaling the PDE and PDEP residuals separately! — hcarson / detail
  24. only rank 0 should be printing... — hcarson / detail
  25. made a new resNorm type with the sqrt dof weighting. Also reconciled the cases for timing data — hcarson / detail
  26. forgot to go back to 1 thread — hcarson / detail
  27. ILU8 + use 3 threads for EPIC — hcarson / detail
  28. ILU8 + use 3 threads for EPIC + 5e-8 nonlinear tol — hcarson / detail
  29. Also report the memory — hcarson / detail
  30. forgot to add the option for the local solves — hcarson / detail
  31. forgot to add the option for the local solves — hcarson / detail
  32. added printing the Average FrobNormSq to the optimization output — hcarson / detail
  33. back to blasius — hcarson / detail
  34. trying a beta = 1.0 run — hcarson / detail
  35. back to 1.1 — hcarson / detail
  36. better settings — hcarson / detail
  37. added vorticity field dumping — hcarson / detail
  38. dumping elements to the adapthist file, also forgot to clean up that deltawing again — hcarson / detail
  39. merge con — hcarson / detail
  40. adding the vorticity dump — hcarson / detail
  41. back to DGCONV and turning off the step dump — hcarson / detail
  42. Use a p1 solution transfer if the initial guess in a local solve is non-physical — hcarson / detail
  43. turn on steve logic — hcarson / detail
  44. make the P1 local start actually work... Also remove the duplicate of DOFWeighted — hcarson / detail
  45. actually got the bloody thing working — hcarson / detail
  46. trailing white space — hcarson / detail
  47. FieldBundle fix — hcarson / detail
  48. use the basetype in the constructor for bundles — hcarson / detail
  49. another fix — hcarson / detail
  50. bug fix with streamwise vorticity output — hcarson / detail
  51. dump to the correct iteration — hcarson / detail
  52. RAE2822 DG case — hcarson / detail
  53. switch to SANS opt — hcarson / detail
  54. curved grid implied metric adapter, also NACA0012 case and grids — hcarson / detail
  55. coarser initial grids, p sequencing for the primal solve, and some adapter tweaks — hcarson / detail
  56. Fix refine cmake check — galbramc / detail
  57. Adjoint full potential updates — galbramc / detail
  58. forcing off — cfrontin / detail
  59. square channel ready for adapts + unif conv. — cfrontin / detail
  60. Relax time for XField3D_Wake_avro_btest — galbramc / detail
  61. CMake fix — galbramc / detail
  62. Allow ugrid reader to copy partition — galbramc / detail
  63. quick open-close for writing to outfiles. — cfrontin / detail
  64. finally actually fixed the thing i wanted to fix. — cfrontin / detail
  65. removed trailing whitespace. i hope you are happy now jenkins. — cfrontin / detail
  66. Added FieldLiftArea_DG_BoundaryTrace for boundary trace lifing operator fields — galbramc / detail
  67. test mod. — cfrontin / detail
  68. oops forgot the solve case — cfrontin / detail
  69. Updates to use existing derived quantity outputs for CG — blsc / detail
  70. Updates to generate data for 16.920 PSet — blsc / detail
  71. Updates for VMSD with artificial viscosity — blsc / detail
  72. test/unit/IO/pde/ArtificialViscosity/AVSensor_Source2D_Euler_PressureGrad_pattern.txt — blsc / detail
  73. Sandbox cases for VMSD with shock capturing — blsc / detail
  74. Permissions got mixed up, I think — blsc / detail
  75. Unused variables in test cases — blsc / detail
  76. Uninitialized data fix — blsc / detail
  77. Updated EPIC scripts. Fix possible SANSparallel hang. — galbramc / detail
  78. Another atempt at updating EPIC scripts — galbramc / detail
  79. dont dump met — hcarson / detail
  80. added a data mining script. Use it to scrape from an output file. — hcarson / detail
  81. added dgbr2 cg test cases for squarechannel — cfrontin / detail
  82. squarechannel dg and cg ready to go. — cfrontin / detail
  83. typo and some bonus features for the L2 project case — hcarson / detail
  84. making the BL case outputs the same as Masa's — hcarson / detail
  85. Added an MPI_sleep so processors do not use 100% CPU during system calls — galbramc / detail
  86. Forgot to add MPILib to globak lib list — galbramc / detail
  87. Namespace fixes — galbramc / detail
  88. CMake fixes for MPILib — galbramc / detail
  89. Fix link errors with MPI_sleep — galbramc / detail

#252 (Oct 12, 2019, 1:52:10 AM)

  1. unified solve/adapt output framework — cfrontin / detail
  2. finished that up with the cg case. — cfrontin / detail
  3. Added new PETSc version to CMake — galbramc / detail
  4. working on fourier decay... work in progress. — cfrontin / detail
  5. Revert back to acdl.mit.edu avro repo — galbramc / detail
  6. updated cases — cfrontin / detail
  7. touchup solve4d esw case. — cfrontin / detail
  8. adaptable stuff — cfrontin / detail
  9. case adjust, added heat exact soln — cfrontin / detail
  10. getting there. — cfrontin / detail
  11. you idiot solution squared — cfrontin / detail

#251 (Oct 5, 2019, 1:52:05 AM)

  1. unified solve/adapt output framework — cfrontin / detail
  2. finished that up with the cg case. — cfrontin / detail
  3. Added new PETSc version to CMake — galbramc / detail

#250 (Sep 28, 2019, 1:52:08 AM)

  1. unified solve/adapt output framework — cfrontin / detail
  2. finished that up with the cg case. — cfrontin / detail

#249 (Sep 21, 2019, 10:30:06 AM)

  1. src/pde/NS/ — blsc / detail
  2. Finally commiting some artificial viscosity options — blsc / detail
  3. Merge conflict — blsc / detail
  4. tweak sandbox cases — arthuang / detail
  5. WHOLEPATCH and INNERPATCH flags actually work now. They're fairly janky, but we can use them for comparisons — hcarson / detail
  6. added some asserts to avoid that bug again — hcarson / detail
  7. eurgh typo — hcarson / detail
  8. VMSD DeltaWing case — hcarson / detail
  9. experimenting with source stabilization — arthuang / detail
  10. perturbedSource functions — arthuang / detail
  11. Added unit tests for 2D RANSSA perturbedSource. Added 3D perturbedSource (needs test) — galbramc / detail
  12. the janky test — hcarson / detail
  13. the janky test — hcarson / detail
  14. working on speedups — arthuang / detail
  15. Failing unit test for ProjectSolnCell_Continuous — hcarson / detail
  16. various spot fixes, also working towards L shaped domain Poisson case — hcarson / detail
  17. minor changes. Getting them to coincide so I can get off this branch — hcarson / detail
  18. merging the 6 group backwards step onto my branch — hcarson / detail
  19. added a graceful restart capability. It searches for the last mesh from EPIC and restarts there, then appends to the adapthist file accordingly. Should also solve on the final grid, without appending — hcarson / detail
  20. make the 10% bump on beta canon — hcarson / detail
  21. L shaped domain case actually works pretty well now — hcarson / detail
  22. lower the linear solver tolerance — hcarson / detail
  23. 25% bump on the ball — hcarson / detail
  24. turns out perturbedDiffusion is not worth it.. — arthuang / detail
  25. bumping up beta. Also actually got the graceful restart working — hcarson / detail
  26. updates to pdes for VMSD — arthuang / detail
  27. adding command line args — arthuang / detail
  28. bug fix — arthuang / detail
  29. typo — arthuang / detail
  30. bumping beta up to 1.5*sqrt(d) for vertex and 2sqrt(d) for elemental. Also switching the two cases to ReverseCuthillMcKee, and various other PETSc tweaks — hcarson / detail
  31. bumping beta up to 1.5*sqrt(d) for vertex and 2sqrt(d) for elemental. Also switching the two cases to ReverseCuthillMcKee, and various other PETSc tweaks — hcarson / detail
  32. added checks based on number of processors, to start with smallest grids possible — hcarson / detail
  33. change back to QDM — hcarson / detail
  34. added checks based on number of processors, to start with smallest grids possible — hcarson / detail
  35. change world size per grid — hcarson / detail
  36. missing ndconverts.. new pyrite files — arthuang / detail
  37. fix to allow 0 element in field — hcarson / detail
  38. duplicate functions — arthuang / detail
  39. cases BL update: MMS sad — cfrontin / detail
  40. bug fix for perturbedFluxViscous — arthuang / detail
  41. unit test fixes — arthuang / detail
  42. fix uninitialized data — arthuang / detail
  43. switched to mms sinusoidal decay fcn — cfrontin / detail
  44. fixes to tests. Now there's a weird one... — hcarson / detail
  45. avoid uninitialized memory — hcarson / detail
  46. this should be passing. VMSD should be able to replace the lack of a residual field with a full field evaluation, by setting local_cell_groups to {0,1}. HOWEVER, it can't — hcarson / detail
  47. this should be passing. VMSD should be able to replace the lack of a residual field with a full field evaluation, by setting local_cell_groups to {0,1}. HOWEVER, it can't — hcarson / detail
  48. print the offending error1. stop print nElem to screen. A notebook with Corner singularity exact solution in it — hcarson / detail
  49. new exact solution AD function. — cfrontin / detail
  50. moving to Arthur — hcarson / detail
  51. read in from big Grids — hcarson / detail
  52. forgot to commit — cfrontin / detail
  53. switched to quasi-BL exact solution case. — cfrontin / detail
  54. vmsd local solve unit test working — arthuang / detail
  55. switching to using projectTo — hcarson / detail
  56. Chain adapt case. Use the lower cost levels to precondition the upper levels. — hcarson / detail
  57. vera fix — cfrontin / detail
  58. added powerL, powerH back to specify width of the chain — hcarson / detail
  59. missing include — arthuang / detail
  60. removed SANS parallel from test case. — cfrontin / detail
  61. petsc memory consumption now approx correct — arthuang / detail
  62. tweaks — hcarson / detail
  63. 2.0 multiplier on beta for elemental model is much too large, gives twitch for P1 Corner sing L2. Also made the chain adapt look for a candidate starting mesh in the folder below it — hcarson / detail
  64. Actually append to adapthist. Sigh — hcarson / detail
  65. merge con — hcarson / detail
  66. RANS MMS for PETSc comparisons — arthuang / detail
  67. added an exception to dump local fields if theres a nan generated in the local solve estimation, it's virtual so a different disc can dump more fields. Also some comments about nan checking. — hcarson / detail
  68. switching to using the projectTo field capability. Removing the explicit projector usage — hcarson / detail
  69. add to BC list — arthuang / detail
  70. restarting tweak — hcarson / detail
  71. fix for jenkins and a tweak to a notebook — hcarson / detail
  72. MPI blocker — hcarson / detail
  73. forgot to turn off the new logic — hcarson / detail
  74. another missing include blocker — hcarson / detail
  75. Fix InterpolateFunctionCell_Continuous for Hierarchical — galbramc / detail
  76. added option to read in much finer intial grid — hcarson / detail
  77. A chain adapt for DGBR2 — hcarson / detail
  78. tweaks — hcarson / detail
  79. pre merge — hcarson / detail
  80. if line search cuts back all the way and is unphysical, don't take the update — arthuang / detail
  81. new triple BL with temporal forcing — cfrontin / detail
  82. fixed dumb mistakes — cfrontin / detail
  83. fix + case adjustment. — cfrontin / detail
  84. vera fix — cfrontin / detail
  85. avro-proofing for jenkins. — cfrontin / detail
  86. Consistent hRefinement with new error model — galbramc / detail
  87. Fix compile error — galbramc / detail
  88. Fix compile warning — galbramc / detail
  89. Relaxed a tolerance — galbramc / detail
  90. added scaling for RANS equations and unit tests — arthuang / detail
  91. Have SANS nlopt optimizer use optimizer base. Add trace pentalty term to SANS optimizer. — galbramc / detail
  92. Line search wasn't doing final validity check — blsc / detail
  93. add 3D RANS ojeda test cases — arthuang / detail
  94. Fix link error — galbramc / detail
  95. forgot some files — arthuang / detail
  96. Vera fixes — galbramc / detail
  97. mod output fcn — arthuang / detail
  98. cases realigned. — cfrontin / detail
  99. removed conflicting includes — arthuang / detail
  100. tweaks to linesearch — arthuang / detail
  101. fixed warning — arthuang / detail
  102. Vera fixes — blsc / detail
  103. hack to libmeshb, added hooks for eventual restart — arthuang / detail
  104. put in crude restart.. seems to work? — arthuang / detail
  105. sandbox edits — arthuang / detail
  106. added new residnorm to localsolves — arthuang / detail
  107. forgot a place to add the residNorm — arthuang / detail
  108. lines too long — arthuang / detail
  109. bug in serial version — arthuang / detail
  110. instantiate some things — arthuang / detail
  111. missing includes — arthuang / detail
  112. forgot to add unit test — arthuang / detail
  113. whoops forgot to add the instantiations — arthuang / detail
  114. nonlinear speedups for vmsd — arthuang / detail
  115. fixed Roe btest, added more instantiations — arthuang / detail
  116. more instantiations for restart.. undef'ing the nonlinear stuff — arthuang / detail
  117. added validity check on interior traces, fix for bug in local solve — arthuang / detail
  118. Jenkins let me through... — arthuang / detail
  119. one more — arthuang / detail
  120. moving 0-0 trace thing over to solverinterface_vmsd, fixing some unit tests — arthuang / detail
  121. edit cmake, fix up some unit testing — arthuang / detail
  122. relax tol for intel — arthuang / detail
  123. moving linear VMSD to a different algEqSet — arthuang / detail
  124. uninitialized something for VMSD0? — arthuang / detail
  125. additional non-linear speedup — arthuang / detail
  126. whoops this should actually be correct — arthuang / detail
  127. ok this one is right — arthuang / detail
  128. make sure nonlinear VMSD is unit tested — arthuang / detail
  129. typos in unit tests — arthuang / detail
  130. one last typo — arthuang / detail
  131. ok this one for real — arthuang / detail
  132. ok now unit tests should pass — arthuang / detail
  133. added function hooks and fixed a typo — arthuang / detail
  134. trying to start up the spacetime vmsd. — cfrontin / detail
  135. converted stuff to be ready for spacetime vmsd. 3d solves should be working. — cfrontin / detail
  136. continuing 3d/4d spacetimization of vmsd. — cfrontin / detail
  137. annnnnd 4d solves should be working. — cfrontin / detail
  138. whitespace deletion — cfrontin / detail
  139. 4d adapts for vmsd — cfrontin / detail
  140. oops forgot to delete a line — cfrontin / detail
  141. tolerancing fix — cfrontin / detail

#248 (Sep 14, 2019, 1:52:08 AM)

  1. src/pde/NS/ — blsc / detail
  2. Finally commiting some artificial viscosity options — blsc / detail
  3. Merge conflict — blsc / detail
  4. tweak sandbox cases — arthuang / detail
  5. WHOLEPATCH and INNERPATCH flags actually work now. They're fairly janky, but we can use them for comparisons — hcarson / detail
  6. added some asserts to avoid that bug again — hcarson / detail
  7. eurgh typo — hcarson / detail
  8. VMSD DeltaWing case — hcarson / detail
  9. experimenting with source stabilization — arthuang / detail
  10. perturbedSource functions — arthuang / detail
  11. Added unit tests for 2D RANSSA perturbedSource. Added 3D perturbedSource (needs test) — galbramc / detail
  12. the janky test — hcarson / detail
  13. the janky test — hcarson / detail
  14. working on speedups — arthuang / detail
  15. Failing unit test for ProjectSolnCell_Continuous — hcarson / detail
  16. various spot fixes, also working towards L shaped domain Poisson case — hcarson / detail
  17. minor changes. Getting them to coincide so I can get off this branch — hcarson / detail
  18. merging the 6 group backwards step onto my branch — hcarson / detail
  19. added a graceful restart capability. It searches for the last mesh from EPIC and restarts there, then appends to the adapthist file accordingly. Should also solve on the final grid, without appending — hcarson / detail
  20. make the 10% bump on beta canon — hcarson / detail
  21. L shaped domain case actually works pretty well now — hcarson / detail
  22. lower the linear solver tolerance — hcarson / detail
  23. 25% bump on the ball — hcarson / detail
  24. turns out perturbedDiffusion is not worth it.. — arthuang / detail
  25. bumping up beta. Also actually got the graceful restart working — hcarson / detail
  26. updates to pdes for VMSD — arthuang / detail
  27. adding command line args — arthuang / detail
  28. bug fix — arthuang / detail
  29. typo — arthuang / detail
  30. bumping beta up to 1.5*sqrt(d) for vertex and 2sqrt(d) for elemental. Also switching the two cases to ReverseCuthillMcKee, and various other PETSc tweaks — hcarson / detail
  31. bumping beta up to 1.5*sqrt(d) for vertex and 2sqrt(d) for elemental. Also switching the two cases to ReverseCuthillMcKee, and various other PETSc tweaks — hcarson / detail
  32. added checks based on number of processors, to start with smallest grids possible — hcarson / detail
  33. change back to QDM — hcarson / detail
  34. added checks based on number of processors, to start with smallest grids possible — hcarson / detail
  35. change world size per grid — hcarson / detail
  36. missing ndconverts.. new pyrite files — arthuang / detail
  37. fix to allow 0 element in field — hcarson / detail
  38. duplicate functions — arthuang / detail
  39. cases BL update: MMS sad — cfrontin / detail
  40. bug fix for perturbedFluxViscous — arthuang / detail
  41. unit test fixes — arthuang / detail
  42. fix uninitialized data — arthuang / detail
  43. switched to mms sinusoidal decay fcn — cfrontin / detail
  44. fixes to tests. Now there's a weird one... — hcarson / detail
  45. avoid uninitialized memory — hcarson / detail
  46. this should be passing. VMSD should be able to replace the lack of a residual field with a full field evaluation, by setting local_cell_groups to {0,1}. HOWEVER, it can't — hcarson / detail
  47. this should be passing. VMSD should be able to replace the lack of a residual field with a full field evaluation, by setting local_cell_groups to {0,1}. HOWEVER, it can't — hcarson / detail
  48. print the offending error1. stop print nElem to screen. A notebook with Corner singularity exact solution in it — hcarson / detail
  49. new exact solution AD function. — cfrontin / detail
  50. moving to Arthur — hcarson / detail
  51. read in from big Grids — hcarson / detail
  52. forgot to commit — cfrontin / detail
  53. switched to quasi-BL exact solution case. — cfrontin / detail
  54. vmsd local solve unit test working — arthuang / detail
  55. switching to using projectTo — hcarson / detail
  56. Chain adapt case. Use the lower cost levels to precondition the upper levels. — hcarson / detail
  57. vera fix — cfrontin / detail
  58. added powerL, powerH back to specify width of the chain — hcarson / detail
  59. missing include — arthuang / detail
  60. removed SANS parallel from test case. — cfrontin / detail
  61. petsc memory consumption now approx correct — arthuang / detail
  62. tweaks — hcarson / detail
  63. 2.0 multiplier on beta for elemental model is much too large, gives twitch for P1 Corner sing L2. Also made the chain adapt look for a candidate starting mesh in the folder below it — hcarson / detail
  64. Actually append to adapthist. Sigh — hcarson / detail
  65. merge con — hcarson / detail
  66. RANS MMS for PETSc comparisons — arthuang / detail
  67. added an exception to dump local fields if theres a nan generated in the local solve estimation, it's virtual so a different disc can dump more fields. Also some comments about nan checking. — hcarson / detail
  68. switching to using the projectTo field capability. Removing the explicit projector usage — hcarson / detail
  69. add to BC list — arthuang / detail
  70. restarting tweak — hcarson / detail
  71. fix for jenkins and a tweak to a notebook — hcarson / detail
  72. MPI blocker — hcarson / detail
  73. forgot to turn off the new logic — hcarson / detail
  74. another missing include blocker — hcarson / detail
  75. Fix InterpolateFunctionCell_Continuous for Hierarchical — galbramc / detail
  76. added option to read in much finer intial grid — hcarson / detail
  77. A chain adapt for DGBR2 — hcarson / detail
  78. tweaks — hcarson / detail
  79. pre merge — hcarson / detail
  80. if line search cuts back all the way and is unphysical, don't take the update — arthuang / detail
  81. new triple BL with temporal forcing — cfrontin / detail
  82. fixed dumb mistakes — cfrontin / detail
  83. fix + case adjustment. — cfrontin / detail
  84. vera fix — cfrontin / detail
  85. avro-proofing for jenkins. — cfrontin / detail
  86. Consistent hRefinement with new error model — galbramc / detail
  87. Fix compile error — galbramc / detail
  88. Fix compile warning — galbramc / detail
  89. Relaxed a tolerance — galbramc / detail
  90. added scaling for RANS equations and unit tests — arthuang / detail
  91. Have SANS nlopt optimizer use optimizer base. Add trace pentalty term to SANS optimizer. — galbramc / detail
  92. Line search wasn't doing final validity check — blsc / detail
  93. add 3D RANS ojeda test cases — arthuang / detail
  94. Fix link error — galbramc / detail
  95. forgot some files — arthuang / detail
  96. Vera fixes — galbramc / detail
  97. mod output fcn — arthuang / detail
  98. cases realigned. — cfrontin / detail
  99. removed conflicting includes — arthuang / detail
  100. tweaks to linesearch — arthuang / detail
  101. fixed warning — arthuang / detail
  102. Vera fixes — blsc / detail
  103. hack to libmeshb, added hooks for eventual restart — arthuang / detail
  104. put in crude restart.. seems to work? — arthuang / detail
  105. sandbox edits — arthuang / detail
  106. added new residnorm to localsolves — arthuang / detail
  107. forgot a place to add the residNorm — arthuang / detail
  108. lines too long — arthuang / detail
  109. bug in serial version — arthuang / detail
  110. instantiate some things — arthuang / detail
  111. missing includes — arthuang / detail
  112. forgot to add unit test — arthuang / detail
  113. whoops forgot to add the instantiations — arthuang / detail
  114. nonlinear speedups for vmsd — arthuang / detail
  115. fixed Roe btest, added more instantiations — arthuang / detail
  116. more instantiations for restart.. undef'ing the nonlinear stuff — arthuang / detail
  117. added validity check on interior traces, fix for bug in local solve — arthuang / detail
  118. Jenkins let me through... — arthuang / detail
  119. one more — arthuang / detail
  120. moving 0-0 trace thing over to solverinterface_vmsd, fixing some unit tests — arthuang / detail
  121. edit cmake, fix up some unit testing — arthuang / detail
  122. relax tol for intel — arthuang / detail
  123. moving linear VMSD to a different algEqSet — arthuang / detail

#247 (Sep 7, 2019, 1:52:09 AM)

  1. tweak sandbox cases — arthuang / detail
  2. WHOLEPATCH and INNERPATCH flags actually work now. They're fairly janky, but we can use them for comparisons — hcarson / detail
  3. added some asserts to avoid that bug again — hcarson / detail
  4. eurgh typo — hcarson / detail
  5. VMSD DeltaWing case — hcarson / detail
  6. experimenting with source stabilization — arthuang / detail
  7. perturbedSource functions — arthuang / detail
  8. Added unit tests for 2D RANSSA perturbedSource. Added 3D perturbedSource (needs test) — galbramc / detail
  9. the janky test — hcarson / detail
  10. the janky test — hcarson / detail
  11. working on speedups — arthuang / detail
  12. Failing unit test for ProjectSolnCell_Continuous — hcarson / detail
  13. various spot fixes, also working towards L shaped domain Poisson case — hcarson / detail
  14. minor changes. Getting them to coincide so I can get off this branch — hcarson / detail
  15. merging the 6 group backwards step onto my branch — hcarson / detail
  16. added a graceful restart capability. It searches for the last mesh from EPIC and restarts there, then appends to the adapthist file accordingly. Should also solve on the final grid, without appending — hcarson / detail
  17. make the 10% bump on beta canon — hcarson / detail
  18. L shaped domain case actually works pretty well now — hcarson / detail
  19. lower the linear solver tolerance — hcarson / detail
  20. 25% bump on the ball — hcarson / detail
  21. turns out perturbedDiffusion is not worth it.. — arthuang / detail
  22. bumping up beta. Also actually got the graceful restart working — hcarson / detail
  23. updates to pdes for VMSD — arthuang / detail
  24. adding command line args — arthuang / detail
  25. bug fix — arthuang / detail
  26. typo — arthuang / detail
  27. bumping beta up to 1.5*sqrt(d) for vertex and 2sqrt(d) for elemental. Also switching the two cases to ReverseCuthillMcKee, and various other PETSc tweaks — hcarson / detail
  28. bumping beta up to 1.5*sqrt(d) for vertex and 2sqrt(d) for elemental. Also switching the two cases to ReverseCuthillMcKee, and various other PETSc tweaks — hcarson / detail
  29. added checks based on number of processors, to start with smallest grids possible — hcarson / detail
  30. change back to QDM — hcarson / detail
  31. added checks based on number of processors, to start with smallest grids possible — hcarson / detail
  32. change world size per grid — hcarson / detail
  33. missing ndconverts.. new pyrite files — arthuang / detail
  34. fix to allow 0 element in field — hcarson / detail
  35. duplicate functions — arthuang / detail
  36. cases BL update: MMS sad — cfrontin / detail
  37. bug fix for perturbedFluxViscous — arthuang / detail
  38. unit test fixes — arthuang / detail
  39. fix uninitialized data — arthuang / detail
  40. switched to mms sinusoidal decay fcn — cfrontin / detail
  41. fixes to tests. Now there's a weird one... — hcarson / detail
  42. avoid uninitialized memory — hcarson / detail
  43. this should be passing. VMSD should be able to replace the lack of a residual field with a full field evaluation, by setting local_cell_groups to {0,1}. HOWEVER, it can't — hcarson / detail
  44. this should be passing. VMSD should be able to replace the lack of a residual field with a full field evaluation, by setting local_cell_groups to {0,1}. HOWEVER, it can't — hcarson / detail
  45. print the offending error1. stop print nElem to screen. A notebook with Corner singularity exact solution in it — hcarson / detail
  46. new exact solution AD function. — cfrontin / detail
  47. moving to Arthur — hcarson / detail
  48. read in from big Grids — hcarson / detail
  49. forgot to commit — cfrontin / detail
  50. switched to quasi-BL exact solution case. — cfrontin / detail
  51. vmsd local solve unit test working — arthuang / detail
  52. switching to using projectTo — hcarson / detail
  53. Chain adapt case. Use the lower cost levels to precondition the upper levels. — hcarson / detail
  54. vera fix — cfrontin / detail
  55. added powerL, powerH back to specify width of the chain — hcarson / detail
  56. missing include — arthuang / detail
  57. removed SANS parallel from test case. — cfrontin / detail
  58. petsc memory consumption now approx correct — arthuang / detail
  59. tweaks — hcarson / detail
  60. 2.0 multiplier on beta for elemental model is much too large, gives twitch for P1 Corner sing L2. Also made the chain adapt look for a candidate starting mesh in the folder below it — hcarson / detail
  61. Actually append to adapthist. Sigh — hcarson / detail
  62. merge con — hcarson / detail
  63. RANS MMS for PETSc comparisons — arthuang / detail
  64. added an exception to dump local fields if theres a nan generated in the local solve estimation, it's virtual so a different disc can dump more fields. Also some comments about nan checking. — hcarson / detail
  65. switching to using the projectTo field capability. Removing the explicit projector usage — hcarson / detail
  66. add to BC list — arthuang / detail
  67. restarting tweak — hcarson / detail
  68. fix for jenkins and a tweak to a notebook — hcarson / detail
  69. MPI blocker — hcarson / detail
  70. forgot to turn off the new logic — hcarson / detail
  71. another missing include blocker — hcarson / detail
  72. Fix InterpolateFunctionCell_Continuous for Hierarchical — galbramc / detail
  73. added option to read in much finer intial grid — hcarson / detail
  74. A chain adapt for DGBR2 — hcarson / detail
  75. tweaks — hcarson / detail
  76. pre merge — hcarson / detail
  77. if line search cuts back all the way and is unphysical, don't take the update — arthuang / detail
  78. new triple BL with temporal forcing — cfrontin / detail
  79. fixed dumb mistakes — cfrontin / detail
  80. fix + case adjustment. — cfrontin / detail
  81. vera fix — cfrontin / detail
  82. avro-proofing for jenkins. — cfrontin / detail

#246 (Aug 31, 2019, 1:52:07 AM)

  1. new lagrange basis functions coming together, shouldnt pass jenkins yet. — cfrontin / detail
  2. Important Comment — cfrontin / detail
  3. fixed the dang lagrange basis functions. and also tested them. — cfrontin / detail
  4. touches. — cfrontin / detail
  5. better tests — cfrontin / detail
  6. documentation update — cfrontin / detail
  7. added matlab script. — cfrontin / detail
  8. seeking cg issue, not for upload — cfrontin / detail
  9. upgraded tests somewhat confident p= 2, p= 3 CG fields should work. not sure why nanning. — cfrontin / detail
  10. l2 working ad not... — cfrontin / detail
  11. added projection test. — cfrontin / detail
  12. sprinkling holy water on hugh's comment vandalism. — cfrontin / detail
  13. documentation fix — cfrontin / detail
  14. experimenting with VMS with mixed form — arthuang / detail
  15. ad4d working, cg fields 4d working up to p=3, new tests. — cfrontin / detail
  16. jenkins fixes — cfrontin / detail
  17. flip switches for commit. — cfrontin / detail
  18. tweaks to AGLS, EDG stab; VMSD adaption case running — arthuang / detail
  19. added some RANS 2D unit tests — arthuang / detail
  20. Refactoring of LocalPatch. Next we need to remove the others. — galbramc / detail
  21. Fixed compile error — galbramc / detail
  22. refactoring edge local. no parallel tests yet, but serial seems to be the same — hcarson / detail
  23. Warning fix — galbramc / detail
  24. forgot to turn DG back to non-edge mode — hcarson / detail
  25. ElementDual is no more. Moving towards LocalPatch only — hcarson / detail
  26. elementxfieldspacetime fix. stabilized seems to be working. needs unit tests still. — cfrontin / detail
  27. jenkins fix. — cfrontin / detail
  28. unstab/gls fix — cfrontin / detail
  29. Added unsplit LocalPatch constructor and universal LocalGlobal consistency check — galbramc / detail
  30. Don't check interior trace local global equivalence — galbramc / detail
  31. Added LocalGlobal equiv check to all LocalPatch tests. Added USE_MPI_XTERM cmake option. — galbramc / detail
  32. Add some Line tests for LocalPatch — galbramc / detail
  33. jEnKiNSSSS — cfrontin / detail
  34. working on parallelizing edge — hcarson / detail
  35. and FINALLY, edge models and patches have a serial parallel equivalency test that passes! — hcarson / detail
  36. parenthesis misplacement — hcarson / detail
  37. Nodal Mode only supports LocalPatch now. Also added getEField() method to MDG — hcarson / detail
  38. left full nodal mode on... — hcarson / detail
  39. it was actually a struct — hcarson / detail
  40. made the nodal switch a run time one so that at least jenkins has to compile the nodal bits, even if they're not tested much yet — hcarson / detail
  41. removing ElementDual amongst other things — hcarson / detail
  42. apparently needed to include array.hpp from boost? — hcarson / detail
  43. speedup for MDG — arthuang / detail
  44. added boost version dependent serialization for array — hcarson / detail
  45. revert a bunch of changes — arthuang / detail
  46. edges always use global node numbering. Fixed bug with sub-cell index and reversed edges — hcarson / detail
  47. serialization is in the MPI folder correctly — hcarson / detail
  48. playing w pseudotime — arthuang / detail
  49. Various LocalPatch fixes — galbramc / detail
  50. fixes to update local2globalBoundaryMap issues — hcarson / detail
  51. removed constructEdgeMap() — hcarson / detail
  52. forgot to actually send the serialization — hcarson / detail
  53. f2d localpatch DG test move, refactor in progress. — cfrontin / detail
  54. converted the 1D edge tests to LocalPatch — hcarson / detail
  55. the 2D local patch test now works for LocalPatch. Also minor typos in the other two tests — hcarson / detail
  56. split out test function into separate testing header. Also include blocker for make_unique.h — hcarson / detail
  57. bloody typo — hcarson / detail
  58. misnamed — hcarson / detail
  59. 3D edge local split and test. — hcarson / detail
  60. a 4D test. It can't actually call yet as Cory has left some developer exceptions in place, but this should work in the future — hcarson / detail
  61. tidy up — hcarson / detail
  62. a bunch of non-passing tests. Also testing the exception throwing from the edge local constructor — hcarson / detail
  63. assertion tests working — hcarson / detail
  64. More local patch updates — galbramc / detail
  65. refactor, debugging field2d_local_split_DG — cfrontin / detail
  66. broke the checkLocalField test function out of the grid checker. Can now pass a local and a global field and check the transfer for all elements within. Doesn't check interior traces yet. — hcarson / detail
  67. asserted can only use the test with XField_LocalPatch — hcarson / detail
  68. Added 2D Edge Split LocalPatch tests — galbramc / detail
  69. Move more XFeid2D local edge tests — galbramc / detail
  70. Created XField3D_LocalPatch and removed old tests — galbramc / detail
  71. Remove overloded nDOF and DOF functions in XField_LocalPatch — galbramc / detail
  72. Alow high-order hierarchical meshes with LocalPatch — galbramc / detail
  73. added a test to compare the serial edge model construction between the old 'at node' technique and the new parallel friendly 'edge map' version. Seems to have been done correctly, so unsure what is causing the bug now... — hcarson / detail
  74. Updated 2D XField Element Dual LocalPatch tests — galbramc / detail
  75. work in progress. working tool functions, working on unit tests. — cfrontin / detail
  76. renamed field_localpatch_edge_cg_btest.h to ..._toolkit.h — cfrontin / detail
  77. More XField LocalPatch unit test conversions — galbramc / detail
  78. name fix — cfrontin / detail
  79. name fix pt. ii — cfrontin / detail
  80. moving towards block petsc solves — arthuang / detail
  81. EG cell stuff — arthuang / detail
  82. Parallelized some LocalPatch tests — galbramc / detail
  83. Checking that the error1_list and step_matrix_list match the old serial implementation. Still passing. wth — hcarson / detail
  84. asserted assumption of error0>=0 and adding exception catch tests — hcarson / detail
  85. the new synthesize_edge works in serial! Using a pifld(), a pointer to the indicator field instead of to the estimate field — hcarson / detail
  86. And with those bug fixes, we now have parallel edge solves — hcarson / detail
  87. Fix so local boundary patches are always consistent with hashing — galbramc / detail
  88. forgot to change NField to Field. Also a grid for the ErrorModel test — hcarson / detail
  89. forgot to turn off FULL_NODAL. Also removed the local function call that will be eroneous in guture — hcarson / detail
  90. forgot another NField() — hcarson / detail
  91. Merge from hcarson/develop — galbramc / detail
  92. field2d_localpatch_dg_btest done. — cfrontin / detail
  93. pull fix — cfrontin / detail
  94. Merge conflicts — galbramc / detail
  95. xfield2d_localpatch_btest done, working, added. — cfrontin / detail
  96. traceorientation signed sealed delivered also tested. — cfrontin / detail
  97. Set unit normal sign for 1D XField_Lagrange. Rename a bunch of LocalPatch tests. — galbramc / detail
  98. Updated LocalPatch Element DG tests — galbramc / detail
  99. ??? — cfrontin / detail
  100. Lots of Local updates — galbramc / detail
  101. removed solution transfer from xfield test. — cfrontin / detail
  102. xfield4d_localpatch_element_dg_btest started up. — cfrontin / detail
  103. almost there... — cfrontin / detail
  104. added 24ptope to xfield4d_localpatch_element_dg_btest. — cfrontin / detail
  105. refactored XField4D_library to actually say it's a 6 pentatope case — cfrontin / detail
  106. Lots of Local updates — galbramc / detail
  107. Remove the local patch #if switch — galbramc / detail
  108. Removed moew XField_Local — galbramc / detail
  109. Relaxed some tolerances — galbramc / detail
  110. added 6ptope test — cfrontin / detail
  111. unit suite naming fix — cfrontin / detail
  112. Removed the last use of old XField local — galbramc / detail
  113. Depricated old local XFields — galbramc / detail
  114. tryna adapt galerkin first shot. — cfrontin / detail
  115. passing working state up to norm. — cfrontin / detail
  116. added NewLinearDOFs accessors. The allocation of the local error indicator in the local patches should work for higher order local patches now — hcarson / detail
  117. set the FULL_NODAL flag to 1 permanently. Also added an exception on the CG and element branch of the local solves. Directs everyone to use the EDGE mode. — hcarson / detail
  118. forgot some files — hcarson / detail
  119. small changes — cfrontin / detail
  120. Added hessq to diffusionViscousGradient. Finished QCR terms for 2D. — galbramc / detail
  121. added parallel to the AD test — hcarson / detail
  122. Fixes for g++-9 — galbramc / detail
  123. Allow parallel MMA option with SANSparallel optimizer — galbramc / detail
  124. realized we need ghosts.. lots of work to do — arthuang / detail
  125. Rename DOF_rank to DOFghost_rank for clarity — galbramc / detail
  126. test case mods to run on laptop... — cfrontin / detail
  127. change MDG to VMSD — arthuang / detail
  128. working on EG field — arthuang / detail
  129. implementation of EG field — arthuang / detail
  130. tweaks — arthuang / detail
  131. fieldcopy tags — arthuang / detail
  132. fieldcopy fixed? — arthuang / detail
  133. diff fieldtag — arthuang / detail
  134. eg field compiling — arthuang / detail
  135. Made Field.deallocate protected — galbramc / detail
  136. unit tests for EG field — arthuang / detail
  137. bug fix for curved grids — hcarson / detail
  138. Initial attempt at 2x2 block PETSc — galbramc / detail
  139. Adding more parallel testing — galbramc / detail
  140. seeking bug in changes that's frustrating 4d adapts... — cfrontin / detail
  141. Working on tests for new 2x2 block parallel solves — galbramc / detail
  142. Finished up additional parallel tests — galbramc / detail
  143. Working on parallel EDG — galbramc / detail
  144. progress toward static condensation — arthuang / detail
  145. missing instantiation — arthuang / detail
  146. add static condense to linear solver options — arthuang / detail
  147. Need Embedded DG field for EDG to work in parallel — galbramc / detail
  148. serial SC working — arthuang / detail
  149. Fixed compile errors — galbramc / detail
  150. added l2 sandbox distinct from philips since hes working on paper — cfrontin / detail
  151. unfinished if fix — cfrontin / detail
  152. VMSD seems to function in parallel — galbramc / detail
  153. One more compile error — galbramc / detail
  154. looking for bugs — arthuang / detail
  155. More fixes — galbramc / detail
  156. vmsd adapt almostttt working — arthuang / detail
  157. Relaxed tolerance — galbramc / detail
  158. fixed up error estimate so that VMSD adaption should work — arthuang / detail
  159. One more tolerance relaxation — galbramc / detail
  160. Another relaxation for intel — galbramc / detail
  161. Yet another tolerance relaxation — galbramc / detail
  162. Remove accidental paste — galbramc / detail
  163. don't use unnecessary field for error estimate`:wq — arthuang / detail
  164. update error indicator — arthuang / detail
  165. got rid of eSfld — arthuang / detail
  166. moving towards ghost residuals for VMSD — arthuang / detail
  167. commit fixes — cfrontin / detail
  168. petsc static condense refactor — arthuang / detail
  169. cg embedded ghosts — arthuang / detail
  170. added isStaticCondensed to algEqSet base class — arthuang / detail
  171. jenkins fixins — cfrontin / detail
  172. trying to get unit tests to build — arthuang / detail
  173. Something is still wrong with VMSD in parallel — galbramc / detail
  174. unit tests compiling — arthuang / detail
  175. SA unit tests for static condensed VMSD — arthuang / detail
  176. using BiCGstab for unit test — arthuang / detail
  177. some fixes — cfrontin / detail
  178. added new 4d function, errorestimate tests for 4d — cfrontin / detail
  179. push up to show weird results. — cfrontin / detail
  180. errorestimate_l2 tests ready for 4d, failing, probably due to bug. — cfrontin / detail
  181. thing that broke earlker commit. — cfrontin / detail
  182. turn off failing test. — cfrontin / detail
  183. affline typo ffs — cfrontin / detail
  184. jenkins is a real chowderhead. — cfrontin / detail
  185. fixed petsc btest, reverted some edg things — arthuang / detail
  186. Guard against committing SA with QCR — galbramc / detail
  187. updating error estimate test — arthuang / detail
  188. fixed up VMSD unit tests, PTC static condensation — arthuang / detail
  189. vmsd local solves working...? — arthuang / detail
  190. hunting some parallel bugs for Arthur and the curved grids — hcarson / detail
  191. added an adapt to implied metric method. Useful for getting avro out of a hole on the corner singularity adapt — hcarson / detail
  192. fixed unit test problem — arthuang / detail
  193. got rid of warning, added PTC unit test — arthuang / detail
  194. fixed mpi reduce div by zero bug — cfrontin / detail
  195. errorestimate 4d test is working... — cfrontin / detail
  196. cg field constructor became ambiguous... fixing this — arthuang / detail
  197. finished cg constructor stuff.. added accessor for bubble dofs — arthuang / detail
  198. vmsd working with p>D (extra equations zeroed out) — arthuang / detail
  199. fixed up unit tests — arthuang / detail
  200. missed one fix — hcarson / detail
  201. changed a slightly misnamed template — hcarson / detail
  202. Refactored synthesize_edge. Didn't find anything fishy. Other small fixes. — galbramc / detail
  203. PETSc debug matrix dumps for MATLAB — galbramc / detail
  204. case adjustment. — cfrontin / detail
  205. static condensed parallel VMSD is working!!! — arthuang / detail
  206. formatting — arthuang / detail
  207. fixed cg field constructor — arthuang / detail
  208. forgot a file — arthuang / detail
  209. last CG constructor change? — arthuang / detail
  210. fixed warning, added PETSc memory monitor flag — arthuang / detail
  211. Added edge-element ErrorModel. Various small fixes. — galbramc / detail
  212. push to hypersonic — arthuang / detail
  213. revert some things — arthuang / detail
  214. add petsc stuff to cmake file — arthuang / detail
  215. Fixes for 4D L2 projection adaptation. SANS optimizer has no lower bound on costTarget. FrobNorm does not use coarsening factor for FrobNorm. — galbramc / detail
  216. speedup for vmsd jacobians — arthuang / detail
  217. Vera fixes — galbramc / detail
  218. more speedup — arthuang / detail
  219. switched to using some unique_ptrs so that fields only get created when they're actually needed — hcarson / detail
  220. Fixed warning — galbramc / detail
  221. skip some unnecessary jacobians during local solves — arthuang / detail
  222. some random tests and 4d updates — cfrontin / detail
  223. Trying to reduce compile time — galbramc / detail
  224. Missed one — galbramc / detail
  225. added some more timers. Also undid that merge conflict horror — hcarson / detail
  226. check for NaNs in residual norm — arthuang / detail
  227. fix — cfrontin / detail
  228. annoying bit to change. — cfrontin / detail
  229. ambiguous max — cfrontin / detail
  230. static condensation for local solves — arthuang / detail
  231. revert to usual pseudotime logic — arthuang / detail
  232. trying out nonlinear version of vmsd — arthuang / detail
  233. another std::max fix — cfrontin / detail
  234. case mods for hypersonic. — cfrontin / detail
  235. parallel fix for 2D+T AD cases. — cfrontin / detail
  236. bug fix — arthuang / detail
  237. another jacobian fix — arthuang / detail
  238. last bugs hopefully — arthuang / detail
  239. fixing stabilization — arthuang / detail
  240. flip to edge localsolve on CG adapt3d case to pass. — cfrontin / detail
  241. fixed funkiness from paralell outputs. — cfrontin / detail
  242. Just-in-time cell quadrature caching — galbramc / detail
  243. added validity check for q+q' — arthuang / detail
  244. bug fix on error estimate — arthuang / detail
  245. fix parallel mistake. — cfrontin / detail
  246. Fix divide by zero and link error — galbramc / detail
  247. Just-in-time basis quadrature trace caching — galbramc / detail
  248. Longer timeout for AlgebraicEquationSet_Galerkin_Stabilized_Triangle_SA_btest — galbramc / detail
  249. Caching of basis hessian at quadrature points — galbramc / detail
  250. Compile fix — galbramc / detail
  251. Add Hex Legendre hessians — galbramc / detail
  252. Fixes in tests — galbramc / detail
  253. Hopefully last minor fixes — galbramc / detail
  254. parallel output fix, hopefully nightly fix. — cfrontin / detail
  255. Added SA QCR for 3D. Other small cleanups. — galbramc / detail
  256. Fix compile error — galbramc / detail
  257. fixed stabilized output issue. — cfrontin / detail
  258. hacky new local patch (works on interiors) — arthuang / detail
  259. Trace normal checking only works for P1. Added option for valgrind massif flags. — galbramc / detail
  260. forgot some tests — hcarson / detail
  261. Use prolongated adjoint as initial guess for P+1 adjoint with VMSD — galbramc / detail
  262. fixed true output — cfrontin / detail
  263. Missed one — galbramc / detail
  264. Missed another — galbramc / detail
  265. Added MeshNet option for EPIC — galbramc / detail
  266. One more fix — galbramc / detail
  267. added a function for constructing maps across broken field traces. — hcarson / detail
  268. Created safe_at with better error message for std::container 'at' method — galbramc / detail
  269. Deal with const for safe_at — galbramc / detail
  270. Add missing include — galbramc / detail
  271. Actual correct const treatment for safe_at — galbramc / detail
  272. more fields are now pointers. Should reduce the desctructors cost — hcarson / detail
  273. a 3D flat plate case — hcarson / detail
  274. missed some bits — hcarson / detail
  275. missed some more.... — hcarson / detail
  276. local solves on broken patches working — arthuang / detail
  277. vmsd working with new brokenfield local solves — arthuang / detail
  278. why isn't this working jenkins? — hcarson / detail
  279. fixed SIP stuff w paramflds — arthuang / detail
  280. add some instantiations — arthuang / detail
  281. fixed errormodel_impl weird bug, scripts to SANSparallel optimizer — cfrontin / detail
  282. put in #def to switch between local solve modes — arthuang / detail
  283. missed one — arthuang / detail
  284. changed some of the unique ptrs to use Fields — hcarson / detail
  285. change test name — arthuang / detail
  286. Add static condensation to UMFPACK — galbramc / detail
  287. updating unit tests — arthuang / detail
  288. final unit tests, fixed functional bug, added 3D adapt — arthuang / detail
  289. fixing up more unit tests — arthuang / detail
  290. more unit test fixes — arthuang / detail
  291. lowered tolerance — arthuang / detail
  292. whoops wrong way — arthuang / detail
  293. caught bug in vmsd volume fcn jacobian, added tests — arthuang / detail
  294. added DG to CG dof map function. Also added pointers for the residual field to the field bundles. The local fields should populate directly from the global residual field. There still needs to be a function populated in solverInterface_Galerkin to fill the globalDG residual field — hcarson / detail
  295. eliminated duplicate residual evaluations for local solves — arthuang / detail
  296. vmsd speedup residuals working — arthuang / detail
  297. Nodal estimation uses an internal DG field, which can be accessed through a get. Need to figure out how to get this data out and into the local problem — hcarson / detail
  298. added switch to use wholepatch — arthuang / detail
  299. added RAE2822 sandbox case and grids. — cfrontin / detail
  300. local estimation specialized for Galerkin now works. Maybe? — hcarson / detail
  301. add 3d NS solution fcn — arthuang / detail
  302. beginning to add new asymptotic test but not done yet. — cfrontin / detail
  303. working on speeding up the estimates — hcarson / detail
  304. error estimate transfer working! — arthuang / detail
  305. revert a change — arthuang / detail
  306. arrayQ to real for systems — arthuang / detail
  307. vera fix — cfrontin / detail
  308. fixed the virtual function, removed isLocal from the estimation. Remains to fix the boundary maps and interior trace groups in the basic LocalProblem — hcarson / detail
  309. bug fix, adding some toy problems — arthuang / detail
  310. fixed DGAdvective adapts should use DGAdvective solver interface — arthuang / detail
  311. removed isLocal and non-interior trace group constructors for CG local. The local solves now work by setting cell, interior and boundary groups to limit the solves. — hcarson / detail
  312. pushing to hypersonic — arthuang / detail
  313. add another 3d ojeda — arthuang / detail
  314. fix typo — arthuang / detail
  315. move the output inside the loop — arthuang / detail
  316. everything compiles... — arthuang / detail
  317. mod soln fcn for 3d ojeda — arthuang / detail
  318. L2 now uses the new patch — hcarson / detail
  319. Fixes for SANSparallel metric optimization — galbramc / detail
  320. update unit test — arthuang / detail
  321. need to initialize fields.. — arthuang / detail
  322. sandbox cases for thesis — arthuang / detail
  323. more unit tests fixes.. cmon Jenkins! — arthuang / detail
  324. lines too long — arthuang / detail
  325. added jump penalization for L2 projection. NOWEVERYTHINGWORKSOHYEAH. — hcarson / detail
  326. fixed bug in the test — hcarson / detail
  327. modified the Triple BL cases to match up. Bunch of things: volume functional is solution, they take command line arguments, they actually work with avro, they can do chain adaptation if we want. — hcarson / detail
  328. unused variabels — hcarson / detail
  329. Added a JumpPenalty integrand for interior traces in L2. Doesn't work as well as hoped. Also made the WHOLEPATCH flag work again for AD — hcarson / detail
  330. take the cell groups off of the functional used in the estimation. Avoids double counting when switching between inner and whole patch — hcarson / detail
  331. Potential Adjoint updates — galbramc / detail
  332. sandbox with timings — arthuang / detail
  333. functionalcell galerkin fix on cory — cfrontin / detail
  334. oops missed one. — cfrontin / detail
  335. Fix kutta frame for potential adjoint/drela — galbramc / detail
  336. Caching unit test fix — galbramc / detail
  337. DeltaWing cases — hcarson / detail
  338. more tweaks — hcarson / detail
  339. more tweaks — hcarson / detail
  340. Relax PETSc divergence tolerance. Use P adjoint for P+1 for VMSD. Add PolarGauss function for 2D L2 project. — galbramc / detail
  341. Fix avro interface — galbramc / detail
  342. Fix segfault for parallel metric dump — galbramc / detail
  343. Updated PETSc repository URL — galbramc / detail
  344. Nightly fixes — galbramc / detail
  345. working on error order tests, making sure everything is the same across machines. — cfrontin / detail
  346. all that time down the drain? ffs. — cfrontin / detail
  347. Revived avro fill function for 3D — galbramc / detail
  348. Report min/max edge count on processors for edge local solves — galbramc / detail
  349. Add enum to track local timing. Split out communication time, and report parallel efficiency — galbramc / detail
  350. Fix typo — galbramc / detail
  351. Various small fixes — galbramc / detail
  352. adding a bunch of verbosity and turning the SANSparallel optimizer back off — hcarson / detail
  353. More robust SANS-MMA parallle optimization — galbramc / detail
  354. added a safe_at to XField_impl.h, also working towards a re-entrant Corner Poisson case — hcarson / detail
  355. Use fluxViscousLinearInGradient trick for VMSD — galbramc / detail
  356. clang fix. — cfrontin / detail
  357. jenkins fixes — cfrontin / detail
  358. ejnkins fix 2.0 — cfrontin / detail
  359. Check the boundary count matches between xfld and avro — galbramc / detail
  360. Updated XField2D_BackwardsStep so it works with avro — galbramc / detail
  361. prep for 4d BL problem, no MMS. — cfrontin / detail
  362. Comment out egads dump — galbramc / detail
  363. quick fix — cfrontin / detail
  364. avroXField patched. — cfrontin / detail
  365. Longer allowed time for ErrorOrder 4D — galbramc / detail
  366. Update avro build to use gitlab — galbramc / detail
  367. exact solution fix. — cfrontin / detail
  368. Relaxed timing for refine — galbramc / detail
  369. Fixed issues with Hierarchical basis. Refactored Element projections. Some implied metric experiments. — galbramc / detail
  370. Fixed compile errors — galbramc / detail
  371. Fix assert — galbramc / detail
  372. Declare PyDict methods extern to reduce compile time — galbramc / detail
  373. Relaxed some tolerances — galbramc / detail
  374. Warning fix — galbramc / detail

#245 (Jul 13, 2019, 1:52:09 AM)

  1. new lagrange basis functions coming together, shouldnt pass jenkins yet. — cfrontin / detail
  2. Important Comment — cfrontin / detail
  3. fixed the dang lagrange basis functions. and also tested them. — cfrontin / detail
  4. touches. — cfrontin / detail
  5. better tests — cfrontin / detail
  6. documentation update — cfrontin / detail
  7. added matlab script. — cfrontin / detail
  8. seeking cg issue, not for upload — cfrontin / detail
  9. upgraded tests somewhat confident p= 2, p= 3 CG fields should work. not sure why nanning. — cfrontin / detail
  10. l2 working ad not... — cfrontin / detail
  11. added projection test. — cfrontin / detail
  12. sprinkling holy water on hugh's comment vandalism. — cfrontin / detail
  13. documentation fix — cfrontin / detail
  14. ad4d working, cg fields 4d working up to p=3, new tests. — cfrontin / detail
  15. jenkins fixes — cfrontin / detail
  16. flip switches for commit. — cfrontin / detail
  17. Refactoring of LocalPatch. Next we need to remove the others. — galbramc / detail
  18. Fixed compile error — galbramc / detail
  19. refactoring edge local. no parallel tests yet, but serial seems to be the same — hcarson / detail
  20. Warning fix — galbramc / detail
  21. forgot to turn DG back to non-edge mode — hcarson / detail
  22. ElementDual is no more. Moving towards LocalPatch only — hcarson / detail
  23. elementxfieldspacetime fix. stabilized seems to be working. needs unit tests still. — cfrontin / detail
  24. jenkins fix. — cfrontin / detail
  25. unstab/gls fix — cfrontin / detail
  26. Added unsplit LocalPatch constructor and universal LocalGlobal consistency check — galbramc / detail
  27. Don't check interior trace local global equivalence — galbramc / detail
  28. Added LocalGlobal equiv check to all LocalPatch tests. Added USE_MPI_XTERM cmake option. — galbramc / detail
  29. Add some Line tests for LocalPatch — galbramc / detail
  30. jEnKiNSSSS — cfrontin / detail
  31. working on parallelizing edge — hcarson / detail
  32. and FINALLY, edge models and patches have a serial parallel equivalency test that passes! — hcarson / detail
  33. parenthesis misplacement — hcarson / detail
  34. Nodal Mode only supports LocalPatch now. Also added getEField() method to MDG — hcarson / detail
  35. left full nodal mode on... — hcarson / detail
  36. it was actually a struct — hcarson / detail
  37. made the nodal switch a run time one so that at least jenkins has to compile the nodal bits, even if they're not tested much yet — hcarson / detail
  38. removing ElementDual amongst other things — hcarson / detail
  39. apparently needed to include array.hpp from boost? — hcarson / detail
  40. added boost version dependent serialization for array — hcarson / detail
  41. edges always use global node numbering. Fixed bug with sub-cell index and reversed edges — hcarson / detail
  42. serialization is in the MPI folder correctly — hcarson / detail
  43. Various LocalPatch fixes — galbramc / detail
  44. fixes to update local2globalBoundaryMap issues — hcarson / detail
  45. removed constructEdgeMap() — hcarson / detail
  46. forgot to actually send the serialization — hcarson / detail
  47. f2d localpatch DG test move, refactor in progress. — cfrontin / detail
  48. converted the 1D edge tests to LocalPatch — hcarson / detail
  49. the 2D local patch test now works for LocalPatch. Also minor typos in the other two tests — hcarson / detail
  50. split out test function into separate testing header. Also include blocker for make_unique.h — hcarson / detail
  51. bloody typo — hcarson / detail
  52. misnamed — hcarson / detail
  53. 3D edge local split and test. — hcarson / detail
  54. a 4D test. It can't actually call yet as Cory has left some developer exceptions in place, but this should work in the future — hcarson / detail
  55. tidy up — hcarson / detail
  56. a bunch of non-passing tests. Also testing the exception throwing from the edge local constructor — hcarson / detail
  57. assertion tests working — hcarson / detail
  58. More local patch updates — galbramc / detail
  59. refactor, debugging field2d_local_split_DG — cfrontin / detail
  60. broke the checkLocalField test function out of the grid checker. Can now pass a local and a global field and check the transfer for all elements within. Doesn't check interior traces yet. — hcarson / detail
  61. asserted can only use the test with XField_LocalPatch — hcarson / detail
  62. Added 2D Edge Split LocalPatch tests — galbramc / detail
  63. Move more XFeid2D local edge tests — galbramc / detail
  64. Created XField3D_LocalPatch and removed old tests — galbramc / detail
  65. Remove overloded nDOF and DOF functions in XField_LocalPatch — galbramc / detail
  66. Alow high-order hierarchical meshes with LocalPatch — galbramc / detail
  67. added a test to compare the serial edge model construction between the old 'at node' technique and the new parallel friendly 'edge map' version. Seems to have been done correctly, so unsure what is causing the bug now... — hcarson / detail
  68. Updated 2D XField Element Dual LocalPatch tests — galbramc / detail
  69. work in progress. working tool functions, working on unit tests. — cfrontin / detail
  70. renamed field_localpatch_edge_cg_btest.h to ..._toolkit.h — cfrontin / detail
  71. More XField LocalPatch unit test conversions — galbramc / detail
  72. name fix — cfrontin / detail
  73. name fix pt. ii — cfrontin / detail
  74. Parallelized some LocalPatch tests — galbramc / detail
  75. Checking that the error1_list and step_matrix_list match the old serial implementation. Still passing. wth — hcarson / detail
  76. asserted assumption of error0>=0 and adding exception catch tests — hcarson / detail
  77. the new synthesize_edge works in serial! Using a pifld(), a pointer to the indicator field instead of to the estimate field — hcarson / detail
  78. And with those bug fixes, we now have parallel edge solves — hcarson / detail
  79. Fix so local boundary patches are always consistent with hashing — galbramc / detail
  80. forgot to change NField to Field. Also a grid for the ErrorModel test — hcarson / detail
  81. forgot to turn off FULL_NODAL. Also removed the local function call that will be eroneous in guture — hcarson / detail
  82. forgot another NField() — hcarson / detail
  83. Merge from hcarson/develop — galbramc / detail
  84. field2d_localpatch_dg_btest done. — cfrontin / detail
  85. pull fix — cfrontin / detail
  86. Merge conflicts — galbramc / detail
  87. xfield2d_localpatch_btest done, working, added. — cfrontin / detail
  88. traceorientation signed sealed delivered also tested. — cfrontin / detail
  89. Set unit normal sign for 1D XField_Lagrange. Rename a bunch of LocalPatch tests. — galbramc / detail
  90. Updated LocalPatch Element DG tests — galbramc / detail
  91. ??? — cfrontin / detail
  92. Lots of Local updates — galbramc / detail
  93. removed solution transfer from xfield test. — cfrontin / detail
  94. xfield4d_localpatch_element_dg_btest started up. — cfrontin / detail
  95. almost there... — cfrontin / detail
  96. added 24ptope to xfield4d_localpatch_element_dg_btest. — cfrontin / detail
  97. refactored XField4D_library to actually say it's a 6 pentatope case — cfrontin / detail
  98. Lots of Local updates — galbramc / detail
  99. Remove the local patch #if switch — galbramc / detail
  100. Removed moew XField_Local — galbramc / detail
  101. Relaxed some tolerances — galbramc / detail
  102. added 6ptope test — cfrontin / detail
  103. unit suite naming fix — cfrontin / detail
  104. Removed the last use of old XField local — galbramc / detail
  105. Depricated old local XFields — galbramc / detail

#244 (Jul 6, 2019, 2:13:38 AM)

  1. new lagrange basis functions coming together, shouldnt pass jenkins yet. — cfrontin / detail
  2. Important Comment — cfrontin / detail
  3. fixed the dang lagrange basis functions. and also tested them. — cfrontin / detail
  4. touches. — cfrontin / detail
  5. better tests — cfrontin / detail
  6. documentation update — cfrontin / detail
  7. added matlab script. — cfrontin / detail
  8. seeking cg issue, not for upload — cfrontin / detail
  9. upgraded tests somewhat confident p= 2, p= 3 CG fields should work. not sure why nanning. — cfrontin / detail
  10. l2 working ad not... — cfrontin / detail
  11. added projection test. — cfrontin / detail
  12. sprinkling holy water on hugh's comment vandalism. — cfrontin / detail
  13. documentation fix — cfrontin / detail
  14. ad4d working, cg fields 4d working up to p=3, new tests. — cfrontin / detail
  15. jenkins fixes — cfrontin / detail
  16. flip switches for commit. — cfrontin / detail
  17. Refactoring of LocalPatch. Next we need to remove the others. — galbramc / detail
  18. Fixed compile error — galbramc / detail
  19. refactoring edge local. no parallel tests yet, but serial seems to be the same — hcarson / detail
  20. Warning fix — galbramc / detail
  21. forgot to turn DG back to non-edge mode — hcarson / detail
  22. ElementDual is no more. Moving towards LocalPatch only — hcarson / detail
  23. elementxfieldspacetime fix. stabilized seems to be working. needs unit tests still. — cfrontin / detail
  24. jenkins fix. — cfrontin / detail
  25. unstab/gls fix — cfrontin / detail
  26. Added unsplit LocalPatch constructor and universal LocalGlobal consistency check — galbramc / detail
  27. Don't check interior trace local global equivalence — galbramc / detail
  28. Added LocalGlobal equiv check to all LocalPatch tests. Added USE_MPI_XTERM cmake option. — galbramc / detail
  29. Add some Line tests for LocalPatch — galbramc / detail
  30. jEnKiNSSSS — cfrontin / detail
  31. working on parallelizing edge — hcarson / detail
  32. and FINALLY, edge models and patches have a serial parallel equivalency test that passes! — hcarson / detail
  33. parenthesis misplacement — hcarson / detail
  34. Nodal Mode only supports LocalPatch now. Also added getEField() method to MDG — hcarson / detail
  35. left full nodal mode on... — hcarson / detail
  36. it was actually a struct — hcarson / detail
  37. made the nodal switch a run time one so that at least jenkins has to compile the nodal bits, even if they're not tested much yet — hcarson / detail
  38. removing ElementDual amongst other things — hcarson / detail
  39. apparently needed to include array.hpp from boost? — hcarson / detail
  40. added boost version dependent serialization for array — hcarson / detail
  41. serialization is in the MPI folder correctly — hcarson / detail
  42. forgot to actually send the serialization — hcarson / detail
  43. bloody typo — hcarson / detail

#243 (Jun 29, 2019, 9:18:31 AM)

  1. changing branch — hcarson / detail
  2. MC for running on hypersonic — hcarson / detail
  3. ready for running on hypersonic — hcarson / detail
  4. Generalized valgrind suppression — galbramc / detail
  5. moving to hypersonic again — hcarson / detail
  6. egads coords must have 3 dimensions even in 2d — pcaplan / detail
  7. the final files from the project — hcarson / detail
  8. forgot a function — hcarson / detail
  9. pushing to tucano — arthuang / detail
  10. Suppressed CMakeLists errors. [TBD] — shunz / detail
  11. Fixed panel metod tests — shunz / detail
  12. AFLR4 updates and some Jenkins scripts — galbramc / detail
  13. Link tetgen before avro — galbramc / detail
  14. instantation of elementlocal version of local splits for 4d...unit test will fail because the result is different than savi's convention — pcaplan / detail
  15. missing definitions for elementlocal & edgelocal — pcaplan / detail
  16. some instantiations of savi's method for doing local splits — pcaplan / detail
  17. xfield_lagrange method of doing local splits...still debugging...will fix later... — pcaplan / detail
  18. Refactoring.  Patched unit tests — shunz / detail
  19. More unit tests — shunz / detail
  20. added unit tests — shunz / detail
  21. Fixed unit tests — shunz / detail
  22. Fixed IBL unit tests — shunz / detail
  23. Added unit test.  Turned off unused methods. — shunz / detail
  24. Fixed a bug in CMakeLists: use of out-of-scope variable — shunz / detail
  25. Fixed a bug in cmake files that only appear when building with Xcode — shunz / detail
  26. Refactored ping test input array type.  Fixed IBL-related 4x4 block system ping tests.  Added missing MPI-related method definitions for pure virtural methods — shunz / detail
  27. Relocated code into SANS_MPI macros; otherwise, errors are raised about "member access to incomplete type" — shunz / detail
  28. Verified/fixed/cleaned IBL system tests with transition (full upwind). — shunz / detail
  29. Fixed duplicate naming of boost test suite — shunz / detail
  30. Relaxed pyrite tolerance — shunz / detail
  31. Updated forced-transition pyrite files after the bug fix in commit b30121ee5531d91e84aac94fbdab6462f458f4f8 — shunz / detail
  32. Turned off file dump — shunz / detail
  33. Fixed formatting — shunz / detail
  34. Fixed empty traling line — shunz / detail
  35. Fixed DG and HDG AES tests for uncoupled IBL — shunz / detail
  36. Fixed formatting — shunz / detail
  37. Reverted changes to (viscous) HDG stuff: those abandoned changes treated qfld and afld as a single bundle field — shunz / detail
  38. Update AlgebraicEquationSet_HDGAdvective_Advection_btest.cpp — shunz / detail
  39. Fixed one more test affected by ping test refactoring.  Fixed formatting and screen output — shunz / detail
  40. Fixed another system test affected by IBL Qauxv interpreter refactoring — shunz / detail
  41. Update ErrorOrder_1D_HDGAdvective_Advection_btest.cpp — shunz / detail
  42. Fixed warning and missing instantiation — shunz / detail
  43. Added an instantiation just for completeness, although it is no longer used — shunz / detail
  44. moving towards adjoint GLS — arthuang / detail
  45. Cleaned sandbox cases — shunz / detail
  46. relaxed tolerances for clang_release — shunz / detail
  47. Suppressed output — shunz / detail
  48. Fixed bugs in CMakeLists — shunz / detail
  49. Fixed HDG advection tests — shunz / detail
  50. Removed the pure advection test case using (viscous) HDG machinery — shunz / detail
  51. parallel outputs in galerkin solver interface, AGLS error estimation fixed? — arthuang / detail
  52. Refactored halving line search and fixed unit tests — shunz / detail
  53. Fixed memory errors — shunz / detail
  54. Relaxed tolerance for intel — shunz / detail
  55. relaxed tolerances for intel18 — shunz / detail
  56. Relaxed timeout limits — shunz / detail
  57. Speed up unit tests in response to Jenkins timeout — shunz / detail
  58. Fixed typo — shunz / detail
  59. Relaxed tolerance for gnu48 — shunz / detail
  60. Tried to fix timeout on Jenkins testing (coverage_clang reynolds) — shunz / detail
  61. Reverted CMakeLists to see if TIMEOUT is set properly this time on Jenkins — shunz / detail
  62. minor refactoring — shunz / detail
  63. Refactored CMakeLists for Xcode build — shunz / detail
  64. Refactored Newton solver — shunz / detail
  65. Minor fix — shunz / detail
  66. Fixed warnings — shunz / detail
  67. Added IBL max update fraction — shunz / detail
  68. Enabled under-relaxed Newton update for coupled 4x4 block system of IBL with free transition. — shunz / detail
  69. Refactor of avro XField interface — galbramc / detail
  70. Consistent logic for setting cmake testing timout property — galbramc / detail
  71. Fixed refine interface change — galbramc / detail
  72. Fix ifdef when not using avro — galbramc / detail
  73. More fixes to deal with avro — galbramc / detail
  74. Minor cleanup — galbramc / detail
  75. Added unit tests for IBL updateFraction — shunz / detail
  76. Upgrade PETSc — galbramc / detail
  77. More avro and PETSc tweaks — galbramc / detail
  78. I don't understand why dl library is needed to link a static library... — galbramc / detail
  79. Fix for refine check — galbramc / detail
  80. Suppress compiler warning when building PETSc — galbramc / detail
  81. Fix for avro with 4D — galbramc / detail
  82. Enable refine testing again — galbramc / detail
  83. Updated copyright date to 2019 — galbramc / detail
  84. Updated copyright date to 2019 — galbramc / detail
  85. dimension-independent local splits — pcaplan / detail
  86. timing tests show dim-independent implementation on par with savithru's impl...tried to debug hugh's local xfield in primal mode but something is wrong...unit tests on the way — pcaplan / detail
  87. adding stabilized error estimation infrastructure — arthuang / detail
  88. more playing with AGLS — arthuang / detail
  89. minor edits — arthuang / detail
  90. reconciling merge conflicts and some tweaks — hcarson / detail
  91. license updates — hcarson / detail
  92. fixes to match avro — hcarson / detail
  93. forgot to add the avro defined precompile check — hcarson / detail
  94. relaxed tolerances and forgot to split world — hcarson / detail
  95. tweaking tol again... — hcarson / detail
  96. another tweak... — hcarson / detail
  97. cleanup of localpatch + commenting — pcaplan / detail
  98. copyright — pcaplan / detail
  99. more copyright — pcaplan / detail
  100. Updates for MOESS optimizations. Still needs more work. — galbramc / detail
  101. Instantiations for 4D AD solve. — galbramc / detail
  102. A few fixes — galbramc / detail
  103. Compile fixes — galbramc / detail
  104. More instantiations for 4D — galbramc / detail
  105. removed anachronistic definition of primal grid. Primal grid now matches the behavior of the normal DG grids. Unit tests have just been turned off in the meantime — hcarson / detail
  106. make sure mpi is init'd before calling rank by actually running in parallel — pcaplan / detail
  107. revert back to dual — pcaplan / detail
  108. ifdef SANS_AVRO for tests with CKF triangulation — pcaplan / detail
  109. changed to Dual in the system test — hcarson / detail
  110. attempted to fix nightly tests — shunz / detail
  111. Relaxed timings, fixed warning — galbramc / detail
  112. Updated pyrite files to fix nightly tests — shunz / detail
  113. Moved timing test into sandbox — galbramc / detail
  114. Cleanup of refine interface with auto memory management. — galbramc / detail
  115. Modest progress on instantiations. — cfrontin / detail
  116. Fix include — galbramc / detail
  117. 4D box unit grid grandfathered out of XField_KuhnFreudenthal. — cfrontin / detail
  118. added fix to 3D — hcarson / detail
  119. removed the separate 4D file, just added an instantiate at the end of 3D — hcarson / detail
  120. p=7 led to error close to machine zero, which seemed to cause touble to nightly ErrorOrder test.  Cut back p from 7 to 6 — shunz / detail
  121. p=6 still too high for pyrite test for ErrorOrder — shunz / detail
  122. Attempted to warning "use of zero-allocated memory" — shunz / detail
  123. Some cleanup in the sandbox. Added 2D L2Project adaptation — galbramc / detail
  124. Added tecplot dump for metric fields. Other small fixes — galbramc / detail
  125. Changed floor to round for generating new 1D mesh — ursachi / detail
  126. Minor refactoring — shunz / detail
  127. Compile fixes and more dependency warning suppressions — galbramc / detail
  128. Add dl library for avro — galbramc / detail
  129. Replaced nt transport equation with G variable as in SciTech paper, although the results are equivalent — shunz / detail
  130. bits and pieces — hcarson / detail
  131. added linear args and a test — hcarson / detail
  132. just wanna get my stuff in the repo — pcaplan / detail
  133. Files for parallel periodic XField2D_Box_Triangle_Lagrange (Issues need to be fixed) — kug46 / detail
  134. retrieve edge indices and sub elems from split — pcaplan / detail
  135. ref coordinates on split sub cells — pcaplan / detail
  136. Added a layer of abstractions when evaluating fluxes, sources etc. in IBL pde class — shunz / detail
  137. Fixed formatting... previously went under the radar since vera++ was not installed locally... — shunz / detail
  138. inst of some 4d adaptation things — pcaplan / detail
  139. Added scalar and dot product fixes for MatrixSymS — galbramc / detail
  140. Working on 3d ST... — cfrontin / detail
  141. Enabled smooth laminar/turbulent blending — shunz / detail
  142. Fixed SVD calculation for normal vector for 4D tet. — cfrontin / detail
  143. Scrubbed some comments. — cfrontin / detail
  144. edits to gls error estimation — arthuang / detail
  145. unit tests for basis function ref elem split — pcaplan / detail
  146. 4d adapt? — pcaplan / detail
  147. Fixed intel errors by relaxing tolerance and reconciling a missing pyrite file specialized for intel MKL — shunz / detail
  148. added a Field weighted stabilized CG nodal estimate integrand test in 2D — hcarson / detail
  149. comment — hcarson / detail
  150. Continued work on ElementXField implementations. — cfrontin / detail
  151. Vera fixes, COPYRIGHT fixes, and some avro preprocessor fixes. — cfrontin / detail
  152. Updates for 2D L2 Projection sandbox test — galbramc / detail
  153. Updates for 1D L2 Projection sandbox test — galbramc / detail
  154. Clearing out high-level exceptions whose low-level implementations are done. — cfrontin / detail
  155. Added last bits of ADST4D case, should run (?) now. — cfrontin / detail
  156. Added new trace free step matrix error model. Not enabled. — galbramc / detail
  157. added a 2D error estimate test, and asserted assumption on basis function type — hcarson / detail
  158. Fix. — cfrontin / detail
  159. fixed the estimate vary tests — hcarson / detail
  160. notebook with Double BL exact solutions — hcarson / detail
  161. forgot the copyright change — hcarson / detail
  162. Normalize MOESS optimization with nlopt — galbramc / detail
  163. Fixed undefined reference — galbramc / detail
  164. Fixed a bug in laminar/turbulent blending function — shunz / detail
  165. ifdef SANS_AVRO requirements in unit tests. — cfrontin / detail
  166. removed the scp to devastator. Should be useful for everyone now — hcarson / detail
  167. forgot to change a quadratic function explicit constructor — hcarson / detail
  168. undoing a print — hcarson / detail
  169. EQUILATERAL PENTATOPE coordinates + added unit volume check in unit test to catch this — pcaplan / detail
  170. unit test for split ref step matrix on pentatopes + generating matlab script — pcaplan / detail
  171. unit tests for error model — pcaplan / detail
  172. 4D L2 ERROR ADAPTATION WORKS...cleaning up........ — pcaplan / detail
  173. Added new MOESS optimization without global FrobNorm — galbramc / detail
  174. Forgot CMake file — galbramc / detail
  175. CG artificial viscosity in 2D — blsc / detail
  176. Small fix for cmake summary — galbramc / detail
  177. Weekly test fixes — galbramc / detail
  178. Modified AlgEqSet, IntegrandInteriorTrace and 2D DGAdvective toy for Parallel 2D Periodic Grids — kug46 / detail
  179. Towards parallel PETSc/TAO — galbramc / detail
  180. Refactored intermittency calculation — shunz / detail
  181. Generailized Projection to Qauxi to handle blended intermittency. — shunz / detail
  182. Trying to bump coverage. — cfrontin / detail
  183. Some cleanup of logEuclidian cost — galbramc / detail
  184. Added lagrange P1 to the exception — hcarson / detail
  185. copywrite update for some files — arthuang / detail
  186. Various small fixes — galbramc / detail
  187. added a Tanh2 function based on Loseille's Tanh3 — hcarson / detail
  188. Updated Embedding unit test for quadrature integration — galbramc / detail
  189. Reverted to binary intermittency as default — shunz / detail
  190. Relaxed tolerance for intel compiler.  Restored default to binary intermittency for existing tests — shunz / detail
  191. Trying to get coverage... — cfrontin / detail
  192. Tests added + un-tested, unused additions removed. — cfrontin / detail
  193. Added comments and made sure ADST4D case is ready for parallelization. — cfrontin / detail
  194. More parallel fixes. — cfrontin / detail
  195. Relaxed torleranc for gnu48 — shunz / detail
  196. More parallel fixes. — cfrontin / detail
  197. Added regularized point source to accommodate potential co-existence of free and forced transition in the captured transition treatment — shunz / detail
  198. Updated ADST3D cases (solve and adapt) for avro and MPI use. — cfrontin / detail
  199. Forgot an MPI redefine. — cfrontin / detail
  200. jk MPI fix actually this time. — cfrontin / detail
  201. Minor fix — galbramc / detail
  202. Continued avro- and MPI-ification. — cfrontin / detail
  203. Unit testing fixes. — cfrontin / detail
  204. Fixed warning. — cfrontin / detail
  205. Fixed fstream initializer. — cfrontin / detail
  206. Warning cleanup... — cfrontin / detail
  207. Fixes towards parallel+periodic — galbramc / detail
  208. Coverage improvement... — cfrontin / detail
  209. cleanup of interface to match savithru's — pcaplan / detail
  210. instantiation of 4d savithru splits (technically the extraction works because that's what i started with but the actual split does not) — pcaplan / detail
  211. Fixes for running parallel DG with periodic BCs — galbramc / detail
  212. Removed adapt4d skeleton from build. — cfrontin / detail
  213. Added instantiation — galbramc / detail
  214. ffs — cfrontin / detail
  215. instantiate SVD (with error), XField_Local calls XField_LocalPatch in 4d which local_split_patch is turned off — pcaplan / detail
  216. ifdef sans avro in sandbox file — pcaplan / detail
  217. instantiation of new MOESS SANS optimizer for 4d — pcaplan / detail
  218. experimenting w p1 adjoint — arthuang / detail
  219. adapt3d change in api — pcaplan / detail
  220. relaxed tolerance for system test — pcaplan / detail
  221. publicize error model functions...still not sure why — pcaplan / detail
  222. added note about protected methods for error model class — pcaplan / detail
  223. missing operator for 1d function — pcaplan / detail
  224. unprotected from SANS_AVRO avro namespace use — pcaplan / detail
  225. rename file to avoid copyright check — pcaplan / detail
  226. deleted file — pcaplan / detail
  227. Only have vera look at .cpp and .h files — galbramc / detail
  228. SANS_CHECK_CLOSE not BOOST_CHECK_EQUAL for floats, come on philip — pcaplan / detail
  229. bug != in shock capturing — arthuang / detail
  230. revert back to formulation — arthuang / detail
  231. add expt stab (no-op) to 2DAD — arthuang / detail
  232. Added a C2 continuous smooth abs — hcarson / detail
  233. fix intel compiler warning — pcaplan / detail
  234. add pending changes in local patch header — pcaplan / detail
  235. Run SANS_Commit in parallel — galbramc / detail
  236. Cannot specify format for 'time' on all systems — galbramc / detail
  237. Updates to SANS_Commit.sh — galbramc / detail
  238. One more parallel fix — galbramc / detail
  239. Forgot to run 'make all' — galbramc / detail
  240. Fix make warning for now — galbramc / detail
  241. dev exceptioned code required only for 4d tecplot. — cfrontin / detail
  242. added a C2 smoothabs and matlab file that generated — hcarson / detail
  243. actually got the smoothmax1, smoothmax2 functions work, also added implicitly defined smoothmin1 and smoothmin2 — hcarson / detail
  244. merge fix — cfrontin / detail
  245. merge fix 2 — cfrontin / detail
  246. working on new error models — hcarson / detail
  247. ASExpCombo function for testing L2 — hcarson / detail
  248. Revive Adapt L2Project — galbramc / detail
  249. partial cleanup of local patch before supporting CG patches — pcaplan / detail
  250. Removed PBAM — galbramc / detail
  251. fix for jenkins, smoothmax2, tweaks to SANS opt and the VectorX hack to work with Phil — hcarson / detail
  252. unparallelized a test, there's a bug in P4 Hierarchical parallel — hcarson / detail
  253. turning the P3 and P4 unsplit tests off again. There's something weird and MPI-ish going wrong here — hcarson / detail
  254. Missed one include — galbramc / detail
  255. Missed one more file — galbramc / detail
  256. more cleanup of local patch — pcaplan / detail
  257. Suppress valgrind avro+intel strange warnings — galbramc / detail
  258. Broke up DGBR2lib trying to reduce compile time — galbramc / detail
  259. pre merge — hcarson / detail
  260. support for CG local solves with XField_LocalPatch — pcaplan / detail
  261. forgot to propagate changes in function names to tests — pcaplan / detail
  262. turnon off local patch splits for jenkins — pcaplan / detail
  263. silence warning — pcaplan / detail
  264. Switched implied metric optmizer to MMA — galbramc / detail
  265. agls tweaks — arthuang / detail
  266. Relaxed tolerance — galbramc / detail
  267. complete unit tests for xfield local patch...still need some work on CG tests — pcaplan / detail
  268. merge conflict — hcarson / detail
  269. a stupid bug — hcarson / detail
  270. changes to optimizers, and also turning the modified model back off — hcarson / detail
  271. Fix work weekly — galbramc / detail
  272. Weekly suppression and revived cotire — galbramc / detail
  273. Fixed the last error. — galbramc / detail
  274. Fixed a warning — galbramc / detail
  275. Added option to use CG field for PTC time step — galbramc / detail
  276. Changed the span of the SANS frob norm penalty function — galbramc / detail
  277. unit tests for DG/CG patches — pcaplan / detail
  278. remove print_inline — pcaplan / detail
  279. Conical method of stroud added, and working. Still needs integration into pentatope. — cfrontin / detail
  280. Added a ego map to EGTessModel that maps from All egos to Unique egos — galbramc / detail
  281. add xfield for full potential code using avro — pcaplan / detail
  282. Integrated Stroud into 4D quadrature. — cfrontin / detail
  283. cleanup avro wake3d — pcaplan / detail
  284. Fixed compile error — galbramc / detail
  285. Fixed another compile error — galbramc / detail
  286. work towards high-order support for local patch split — pcaplan / detail
  287. getting unit tests to pass... — arthuang / detail
  288. fixing merge conflicts — arthuang / detail
  289. Fix up PseudoTime_btest — galbramc / detail
  290. Fixed btest memory leak. — cfrontin / detail
  291. Improved stroud testing. — cfrontin / detail
  292. experimenting with an element based local solve — arthuang / detail
  293. BCNone is dead. Long live BCNone. — hcarson / detail
  294. New Implied Metric optimizer based on logM. Various other small fixes. — galbramc / detail
  295. elemID must be global — pcaplan / detail
  296. support for high-order local patch — pcaplan / detail
  297. ifdef avro — pcaplan / detail
  298. Updates for CG 3D Euler with shock capturing and 2D RANS — blsc / detail
  299. multiple def from copy paste — pcaplan / detail
  300. uninitializaed data fix (typo) — cfrontin / detail
  301. changes to error model interface for high-order local splits — pcaplan / detail
  302. Removing problematic instantiations due to wall distance parameter with artificial viscosity for RANS — blsc / detail
  303. add info as to which type of field is being sampled — pcaplan / detail
  304. Removing code from BCEuler3D_mitState.h which was ifdef'd out — blsc / detail
  305. added integer template for equation number — hcarson / detail
  306. typo in avro wake — pcaplan / detail
  307. specialized wake model not defined without avro — pcaplan / detail
  308. added an ND test of the BCNone with and without useFluxViscous — hcarson / detail
  309. Galerkin folder passes — hcarson / detail
  310. added the downcast to NoneBC to extract the boolean — hcarson / detail
  311. converted HDG over to the new Nones — hcarson / detail
  312. Updated implied metric for TAO. Fixed a number of floating point problems. — galbramc / detail
  313. More robust testing, compiler warning silencing. — cfrontin / detail
  314. dont inherit from xfield_avro if not defined — pcaplan / detail
  315. still missing some ifdef — pcaplan / detail
  316. Various compile fixes. Generalized Adapt2D_Mesh_Optimize for all mesh generators. — galbramc / detail
  317. Missed one — galbramc / detail
  318. Warning fixes — galbramc / detail
  319. killed a few more BCTypeNone references, just plugging away — hcarson / detail
  320. pre merge — hcarson / detail
  321. Removed the BCNoneUniField — hcarson / detail
  322. Added switching for expensive PI quadrature/low-cost NI quadrature. Fixed associated tests to get correct convergence rates. — cfrontin / detail
  323. committing sandbox pre-merge — arthuang / detail
  324. someone forgot to actually use the W and B typedefs — hcarson / detail
  325. missing include — hcarson / detail
  326. fixed the CMakeLists.txt — hcarson / detail
  327. made BCNone_AV to do with annoying ArtVisc feature — hcarson / detail
  328. missing includes and last bit — hcarson / detail
  329. fixed typo: derived to dervied — hcarson / detail
  330. vera slap correction — hcarson / detail
  331. Fixed one more BCNone — galbramc / detail
  332. forgot a file — hcarson / detail
  333. Removing more of the block artificial viscosity stuff in 2D and unit test updates — blsc / detail
  334. More merge conflicts — blsc / detail
  335. More merge conflict resolution — blsc / detail
  336. Fixed memory leak. — cfrontin / detail
  337. used quadrature cache for L2 projection — pcaplan / detail
  338. fix for order = 0 integration — pcaplan / detail
  339. New cost target for SANS MOESS optimizer. Lots of work towards avro+Wakes. — galbramc / detail
  340. Fixed typo — galbramc / detail
  341. Minor fixes — galbramc / detail
  342. One more typo — galbramc / detail
  343. Unit test updates — blsc / detail
  344. Helps to use consistent array size — galbramc / detail
  345. Updates to jenkins scripts — galbramc / detail
  346. Segregating MeshAdapter — galbramc / detail
  347. Missing instantiation — blsc / detail
  348. Fixed mistake in BuildAVRO — galbramc / detail
  349. Fixes for 3D CG case with artificial viscosity — blsc / detail
  350. Fixed compile issues related to separating dimensions — galbramc / detail
  351. Initializing variables to fix some compiler warnings — blsc / detail
  352. LU factorization on processors so PETSc solves reliably — blsc / detail
  353. Missed a few — galbramc / detail
  354. IRS updates — blsc / detail
  355. Fix for gnu 4.8 — galbramc / detail
  356. Refactored tecplot output to reduce link time — galbramc / detail
  357. Forgot files — galbramc / detail
  358. Fixed muliple instantiations — galbramc / detail
  359. pre merge — pcaplan / detail
  360. Syncing with hypersonic — blsc / detail
  361. reverting a dead end — arthuang / detail
  362. Adapt4D de-mothballing. — cfrontin / detail
  363. Fixed 'potential' memory leak problem by putting frees in same scope as creation. — cfrontin / detail
  364. Suppress cppcheck bug — galbramc / detail
  365. tweaked AGLS setup, hope this one gets through!! — arthuang / detail
  366. AGLS formulation w/ correction getting good rates! push to laptop, need to fix unit tests — arthuang / detail
  367. unit tests should be working... — arthuang / detail
  368. pre merge — hcarson / detail
  369. Another cppcheck suppression — galbramc / detail
  370. clean up on choosing reSolve groups — hcarson / detail
  371. some clean up — hcarson / detail
  372. added a virtual method for computing Initial Error. The default version has the overhead of a solve associated, whereas the SolverInterface version has the cheaper version that avoids the solve and thus is more robust — hcarson / detail
  373. parameter for avro to allow for interior boundaries needed for wake models — pcaplan / detail
  374. unit tests ready to go — arthuang / detail
  375. Adding 4D Legendre basis for Adapt4D + error estimates. — cfrontin / detail
  376. cmake addition of 4d legendre... still not finished though. — cfrontin / detail
  377. oops — cfrontin / detail
  378. don't use Philip's split for now — arthuang / detail
  379. add nb for output correction — arthuang / detail
  380. got rid of a unnecessary sandbox, updated other test — arthuang / detail
  381. One less call to checkGrid for curved LocalPatch — galbramc / detail
  382. More IRS stuff — blsc / detail
  383. moved metric conformity to separate file — pcaplan / detail
  384. tried to assess metric conformity and re-adjust target cost but simpler to just ask the mesher and have inner loop on adaptations to control target cost — pcaplan / detail
  385. pushing to hypersonic — arthuang / detail
  386. some fixes to actually use the volume factor... — pcaplan / detail
  387. new elemental error estimate for CG, not especially tested but seems to be ok — hcarson / detail
  388. more tweaks to cases — hcarson / detail
  389. Add static caching for pentatope quadrature. — cfrontin / detail
  390. Set edge length bound = 1 for 1D — ursachi / detail
  391. Added exponential and maxcubic functions — ursachi / detail
  392. 1D test cases — ursachi / detail
  393. std::stringstream has a surprisingly expensive constructor — galbramc / detail
  394. Fixed formatting — galbramc / detail
  395. Added missing copyright — galbramc / detail
  396. Added missing includes — galbramc / detail
  397. include set — pcaplan / detail
  398. merge — pcaplan / detail
  399. still default to savithru's local split — pcaplan / detail
  400. protect quadrature tests with use_conical — pcaplan / detail
  401. Deleted unnecessary includes — ursachi / detail
  402. changes to make avro grids compile again — hcarson / detail
  403. cleanup and forgotten files — hcarson / detail
  404. Progress towards avro+Wakes. Added intel19 to jenkins env. — galbramc / detail
  405. Quadrature fix. — cfrontin / detail
  406. Added Legendre4D Bases. — cfrontin / detail
  407. Adapt4D ADST should *start*. — cfrontin / detail
  408. Remove files dumped by avro — galbramc / detail
  409. Fixed missing parameter checks — galbramc / detail
  410. New CFL evolution logic (ifdef'd out) — blsc / detail
  411. Missed a file — blsc / detail
  412. Improved speed of XField_LocalPatch — galbramc / detail
  413. Allow longer time for slow test — galbramc / detail
  414. debug CG local patch — pcaplan / detail
  415. Update UniqueTrace to use UniqueElem — galbramc / detail
  416. forgot a multiply — blsc / detail
  417. Added 4D pentatope Legendre unit tests. — cfrontin / detail
  418. Complete Legendre 4D test. — cfrontin / detail
  419. Actually this time. — cfrontin / detail
  420. Universalized legendre max order, refactored variable. — cfrontin / detail
  421. first errormodel additions. — cfrontin / detail
  422. Updating the delta wing case — galbramc / detail
  423. Fixed compile errors — galbramc / detail
  424. reference element tested and ready to fly. — cfrontin / detail
  425. More compile fixes for DeltaWing. avro works again with it. — galbramc / detail
  426. Logic updates for PTC to hypersonic — blsc / detail
  427. Skip blank backtrace numberes. Lots of work towards avro+Wakes — galbramc / detail
  428. Fixed test for lagrange basis function spacetime, moving coords to inherited class from base class. — cfrontin / detail
  429. warning fix, you dumbass\! — cfrontin / detail
  430. Fixed up hashing and added unit tests for UniquElem — galbramc / detail
  431. fixed cross-machine tolerancing issue. — cfrontin / detail
  432. IRS updates — blsc / detail
  433. Lots of fixes for avro+Wakes — galbramc / detail
  434. Don't dump file — galbramc / detail
  435. pre merge — hcarson / detail
  436. Reduce testing in MOESS_Gradation_Optimizer_NLOPT_btest — galbramc / detail
  437. new and improved AGLS formulation — arthuang / detail
  438. premerge — pcaplan / detail
  439. Use operator() to modify avro topologyDup — galbramc / detail
  440. Updated linesearch with missing status variables — blsc / detail
  441. Add backtrace info to singular matrix. Enable VERA_ERROR for all builds with SANS_Commit.sh — galbramc / detail
  442. Quadrature fixes — galbramc / detail
  443. Removed unnecessary line — galbramc / detail
  444. Add vera to CentOS and Rhel. Undo some fixes. — galbramc / detail
  445. Added boost to LD_LIBRARY_PATH on CentOS — galbramc / detail
  446. Guard against negative nodal metrics from ImpliedMetic optimizer — galbramc / detail
  447. Updated avro and refine build to work with .tgz files — galbramc / detail
  448. Updated build of lapack and avro build to use SANS lapack — galbramc / detail
  449. Forgot to remove test hack — galbramc / detail
  450. Fixed mistake in FindLAPACK — galbramc / detail
  451. Add more diagnostics to Jacobian failure with RefCoordSolver — galbramc / detail
  452. More debug info for singular RefCoordSolve — galbramc / detail
  453. Missing include — galbramc / detail
  454. GRRRRRRRRRRRRRRRR CELL GROUP 1 NEEDS  TO BE ADDED TO RESOLVE CELL GROUPS FOR CG GRRRRRRRRRR (╯°□°)╯︵ ┻━┻ — pcaplan / detail
  455. got rid of hackery — pcaplan / detail
  456. extra space — pcaplan / detail
  457. Working towards scale invariant DenseLinAlg solves — galbramc / detail
  458. line unit test should really allow edge split since its the same as an iso split, vera fixes too — pcaplan / detail
  459. cleanup of unused debugging stuff...what a colossal waste of time — pcaplan / detail
  460. trailing whitespace — pcaplan / detail
  461. Update vera to remove scripts when warn/error is changed. Add limits inlcude where numeric_limits is used. — galbramc / detail
  462. reverting to new AGLS formulation — arthuang / detail
  463. reverting to not use Philip's split to get thru Jenkins — arthuang / detail
  464. silence warning — pcaplan / detail
  465. Updates to CMake files — savithru / detail
  466. Fix quadrature memory leak again — galbramc / detail
  467. trying to solve pivot problem... not yet though. — cfrontin / detail
  468. added assert grid. Wraps check grid in a try-catch and return true if it passes. Can use in places where checkGrid can be removed in Release mode — hcarson / detail
  469. pre merge — hcarson / detail
  470. Updates so avro+Wake appears to be working — galbramc / detail
  471. fixed ReferenceElement constraint jacobian assignment ya dingus. — cfrontin / detail
  472. fixed ReferenceElement constraint jacobian assignment ya dingus, pt. II: unit testing boogaloo — cfrontin / detail
  473. Removed pivoting change that was dumb anyway. — cfrontin / detail
  474. Combined into one file — ursachi / detail
  475. sandbox updates — arthuang / detail
  476. moving towards rans adaptive cg — arthuang / detail
  477. RANS test case working — arthuang / detail
  478. rans joukowski working for real? — arthuang / detail
  479. Fixed link errors — galbramc / detail
  480. More fixes for avro+Wake. Needs some more checks. — galbramc / detail
  481. Forgot files — galbramc / detail
  482. Fixed compile error — galbramc / detail
  483. Split up the Adaptation library by dimension — galbramc / detail
  484. Compile error fix — galbramc / detail
  485. Fix link errors — galbramc / detail
  486. Another link error — galbramc / detail
  487. Migrated single boundary layer scalarfunction from 4D to 3D+T — cfrontin / detail
  488. Remove debug files — galbramc / detail
  489. Don't run avro with wakes due to failing debug dumps in avro — galbramc / detail
  490. Split avro Wake edges that span the entire wake — galbramc / detail
  491. Trying to split segments on wakes, but I need help... — galbramc / detail
  492. Fail depends tests if files are generated — galbramc / detail
  493. Reworking MOESS to use Field_CG — galbramc / detail
  494. revert away from Philip's local split — arthuang / detail
  495. update error estimate unit test — arthuang / detail
  496. unused variable — arthuang / detail
  497. added gravity to 2D two phase case — ericdow / detail
  498. New parameters for new EPIC 10.3 executable — galbramc / detail
  499. More reworking of MOESS — galbramc / detail
  500. More cleaning of MOESS — galbramc / detail
  501. Fix ccache path for SANS_Depend tests — galbramc / detail
  502. Another script fix for depends — galbramc / detail
  503. catch invalid split for high-order — pcaplan / detail
  504. Lots more work towards refactored MOESS — galbramc / detail
  505. More work on MOESS — galbramc / detail
  506. updated ADST cases. — cfrontin / detail
  507. MOESS refactoring to use fields seems to be done. — galbramc / detail
  508. Fixed includes — galbramc / detail
  509. Fixed parallel print statement — galbramc / detail
  510. SANS optimizer was using wrong initial step matric. — galbramc / detail
  511. Fixed bug in edge length deviation — galbramc / detail
  512. Minor fixes — galbramc / detail
  513. More ping tests — galbramc / detail
  514. Split up ProjectGlobalField — galbramc / detail
  515. Asymmetric cost schedule — galbramc / detail
  516. CMake updates — galbramc / detail
  517. continued working on debugging two phase gravity fluxes — ericdow / detail
  518. TAO implied metric calculation works in parallel — galbramc / detail
  519. Fix typo — galbramc / detail
  520. Remove mesh_0.json from tests with avro — galbramc / detail
  521. More work towards parallel MOESS with TAO — galbramc / detail
  522. Some compile fixes — galbramc / detail
  523. Synchronize error models in ghost/zombie cells — galbramc / detail
  524. Parallel MOESS is very close — galbramc / detail
  525. Link error fixes — galbramc / detail
  526. Some small fixes — galbramc / detail
  527. working out RANS stabilization terms — arthuang / detail
  528. pre merge — hcarson / detail
  529. Stole MMA from NLopt to parallelize with TAO. — galbramc / detail
  530. Added paralel serial equivalence test for MOESS TAO-MMA — galbramc / detail
  531. If I TAO+MMA does not wory, try MMA+MPI — galbramc / detail
  532. oliver test is running, not getting right rates yet — arthuang / detail
  533. Added artificial viscosity to tilted reservoir test case — savithru / detail
  534. version used in the git bisect — hcarson / detail
  535. refactored stabilized CG — arthuang / detail
  536. more robust quadrature tests, shouldn't have issues with quadrature caching. — cfrontin / detail
  537. push to laptop in the middle of updating RANSSA — arthuang / detail
  538. missing term for adjoint in RANSSA.. needs unit testing — arthuang / detail
  539. rans sourcegradientjacobiangradient thoroughly unit tested — arthuang / detail
  540. Added pressure integral output for two-phase. Modified tilted reservoir test-case. — savithru / detail
  541. Parallel MMA algorithm! — galbramc / detail
  542. Forgot the unit test — galbramc / detail
  543. and the actual files — galbramc / detail
  544. more forgotten files — galbramc / detail
  545. Some vera fixes — galbramc / detail
  546. took out demote surreal — arthuang / detail
  547. unit tests updated for stabilized integrand — arthuang / detail
  548. changes to error model to use order scaling in the regularization — hcarson / detail
  549. A number of fixes for parallel MOESS — galbramc / detail
  550. copyright notice fix — hcarson / detail
  551. fixing a function that got mangled somehow/sometime — hcarson / detail
  552. license error — hcarson / detail
  553. Updated ErrorModel_Element unit test — galbramc / detail
  554. Fixed warning and relaxed tolerance — galbramc / detail
  555. More minor fixes — galbramc / detail
  556. Added another derivative of St option — galbramc / detail
  557. Really really relaxed tolerance for Parallel/Serial equivalence for TAO with Intel... not sure whats up with that... — galbramc / detail
  558. updates to strongform integrand — arthuang / detail
  559. added needed hooks to 3D for stabilized CG — arthuang / detail
  560. Updated unit tests and whatno — blsc / detail
  561. Nightly fixes — galbramc / detail
  562. Trying to improve the speed of XField_Lagrange — galbramc / detail
  563. add RANS ndconvert omterface — arthuang / detail
  564. fixed up RANS asymptotic — arthuang / detail
  565. added trace on scalar, bug in new source fcn in 3d — arthuang / detail
  566. fixed unit test, mod source — arthuang / detail
  567. new adjoint analytic function for 1D BL — arthuang / detail
  568. added needed hooks for AV, implementation will be needed — arthuang / detail
  569. getting unit tests to pass — arthuang / detail
  570. working on RANS... — arthuang / detail
  571. relax tol on unit test — arthuang / detail
  572. truly linear adjoint — arthuang / detail
  573. caught some bugs, put in unit tests — arthuang / detail
  574. pre merge — hcarson / detail
  575. Quadrature fix on AD3DST. — cfrontin / detail
  576. AD4DST refactor. — cfrontin / detail
  577. orthodoxy is unconsciousness. — cfrontin / detail
  578. quadrature fixes — cfrontin / detail
  579. New unit tests and other updates — blsc / detail
  580. Moving stuff to hypersonic — blsc / detail
  581. More to hypersonic — blsc / detail
  582. AD4D update. — cfrontin / detail
  583. Fixed some analyzer warnings — galbramc / detail
  584. One more analyzer suppression — galbramc / detail
  585. Some MPI cleanup — galbramc / detail
  586. target dof factor — pcaplan / detail
  587. always forget to switch local split — pcaplan / detail
  588. horizontal tab — pcaplan / detail
  589. wake tests were originally off — pcaplan / detail
  590. Finalized moving nDOFpossessed to Field — galbramc / detail
  591. Added missing include — galbramc / detail
  592. settings for Marshall to run — hcarson / detail
  593. Fixed a bug in PTC residual indexing — shunz / detail
  594. Add debug information for MassMatrix singular matrix errors — galbramc / detail
  595. fixes to mesh adapt — hcarson / detail
  596. Missing include — galbramc / detail
  597. Enabled daisy chain in algebraic equation set class for PTC.  Refactored (and hopefully clarified) calculation of pseudo-transient contributions to residuals and jacobians — shunz / detail
  598. Fixed a bug in PTC AES's cell group integration calls, and a bug in residualPseudoTemporal daisy-chain call — shunz / detail
  599. Enabled PTC for coupled IBL of 4x4 block system — shunz / detail
  600. Updated unit test — shunz / detail
  601. CG RANS is looking more promising... — arthuang / detail
  602. loops in rans joukowski — arthuang / detail
  603. One more missing include — galbramc / detail
  604. fixes for jenkins — hcarson / detail
  605. fixed excessively small initial case... now starting from predicted uniform box size. — cfrontin / detail
  606. Added solve4d smart dof case. — cfrontin / detail
  607. added hooks for BICGStab — arthuang / detail
  608. Speed improvements for UniqueElem and XField_Lagrange — galbramc / detail
  609. Purged matrix manipulation Nishida hack — galbramc / detail
  610. fixed test to match ErrorModel_Elemental.h — hcarson / detail
  611. One move too many — galbramc / detail
  612. playing around with stabilization — arthuang / detail
  613. RANS with scaling — arthuang / detail
  614. Fix for jenkins parallel make — galbramc / detail
  615. Updates to porous media PDEs: added gravity to 2D two-phase, added pressure output functional — savithru / detail
  616. Vera fixes — savithru / detail
  617. Fixed copyright notice — savithru / detail
  618. One more fix.. — savithru / detail
  619. Fix uninitialized value — savithru / detail
  620. Some cleanup in PTC — shunz / detail
  621. Fixed a bug in PTC daisy chain implementation: previously, past solution and time step field was not properly updated for daisy-chained equations — shunz / detail
  622. reapply quadorder fix. — cfrontin / detail
  623. Fix for singular matrix detection. Only guard against 1/0. — galbramc / detail
  624. modified some scalar functions — pcaplan / detail
  625. Separating out LAPACK from LAPACKE — galbramc / detail
  626. Fixes for LAPACK interface — galbramc / detail
  627. Forgot to switch back a change — galbramc / detail
  628. Only test with LAPACKE on reynolds — galbramc / detail
  629. Don't show LAPACKE as an option on OSX — galbramc / detail
  630. Minor fix — galbramc / detail
  631. Include MKL in coverge testing — galbramc / detail
  632. Source intel for coverage — galbramc / detail
  633. Fixes for checking LAPACK — galbramc / detail
  634. Automatic checking of all lapack functions used by SANS — galbramc / detail
  635. Some small fixes — galbramc / detail
  636. Relax tolerance a bit more for intel — galbramc / detail
  637. Added maximum rate matrix output — galbramc / detail
  638. updated i/o on 4d cases. — cfrontin / detail
  639. New files for Adjoint consistent potential — galbramc / detail
  640. Cleanup trace matrix print — galbramc / detail
  641. Forgot a file — galbramc / detail
  642. working on RANS — arthuang / detail
  643. Fixes for latest refine — galbramc / detail
  644. agls formulation looks better? — arthuang / detail
  645. modified RANS tests — arthuang / detail
  646. pre merge — hcarson / detail
  647. typo denomerator to denominator — hcarson / detail
  648. caught an indexing bug with interior trace groups — hcarson / detail
  649. some tweaks as was retesting using elemental estimates. They still don't work (phew....) — hcarson / detail
  650. changed the Galerkin DoubleBL case to match up with the DG one — hcarson / detail
  651. changed checkGrid() to assert(assertGrid()). This is the same as checkGrid() in debug mode, but gets removed in release — hcarson / detail
  652. bug fixes and clean up — hcarson / detail
  653. undoing the assertGrid, it doesn't work how I thought it did — hcarson / detail
  654. updated io on 2D+T cases. — cfrontin / detail
  655. fixed solve4d i/o — cfrontin / detail
  656. fixes to make the avro grids work in the adapt — hcarson / detail
  657. fixed h approximation, *philip's tableflip emoticon*. — cfrontin / detail
  658. oops. — cfrontin / detail
  659. hooks for modifying order and power and command line — hcarson / detail
  660. fixed dumbass error. — cfrontin / detail
  661. Minor fixes per intel guide. Fix avro+wake. — galbramc / detail
  662. still working on RANS... — arthuang / detail
  663. Some fixes for BLAS and turn off one Wake test — galbramc / detail
  664. adding new parmafield builders — arthuang / detail
  665. Forgot file dump — galbramc / detail
  666. Updated EPIC interface — galbramc / detail
  667. distance function gradient working — arthuang / detail
  668. hack for sourcegradient compiles — arthuang / detail
  669. unitialized warnings from jenkins — hcarson / detail
  670. tweak for hypersonic — hcarson / detail
  671. found a bug in RANS source gradients — arthuang / detail
  672. this one not that one — arthuang / detail
  673. deprecated ElementDual local patch. Everyone can use Element now, and it should throw an exception if you run with ElementDual — hcarson / detail
  674. added the spaceType to the dummy problems — hcarson / detail
  675. sigh. forgot they need override — hcarson / detail
  676. maaaaaan — hcarson / detail
  677. sigh — hcarson / detail
  678. Fix for PETSc 3.11 — galbramc / detail
  679. moved the all_reduce inside the #define of Boundary Outputs. The FunctionalCell_Galerkin already includes an all_reduce — hcarson / detail
  680. Setup for Mike Park to test metric calculations — galbramc / detail
  681. commiting the new error model and the two double boundary layer cases to run on hypersonic — hcarson / detail
  682. Fix nightly clang warning — galbramc / detail
  683. typos and a small test for the DOF Map, didn't catch anything... — hcarson / detail
  684. playing with formulations, added source to BC — arthuang / detail
  685. getting closer — arthuang / detail
  686. SA wake test case — arthuang / detail
  687. minor edits to rans, unit tests — arthuang / detail
  688. better singular perturbation boundary layer case — pcaplan / detail
  689. i think the stabilization is sound... — arthuang / detail
  690. hugh's suggestion for a dimension-independent error model — pcaplan / detail
  691. Added case to adaptND_mesh_optimizer_toy to easily generate unstructured uniform grids. — cfrontin / detail
  692. SolveND_DGBR2_AD_ST_toy for 3D and 4D now have grid loading capability, but it's ifdeffed out for now. — cfrontin / detail
  693. fixed #define — cfrontin / detail
  694. start from DG grids — arthuang / detail
  695. more tinkering with RANS — arthuang / detail
  696. Some updates for a few things I' — blsc / detail
  697. nitsche param now includes source term — arthuang / detail
  698. Added 2D+T CG unstabilized advection diffusion mechanics. — cfrontin / detail
  699. added an integrand for estimating the square of the L2 error locally — hcarson / detail
  700. locked the TopoDim template to the Topology::TopoDim template. We should not be templating on both here, these should be removed — hcarson / detail
  701. added some integral tests — hcarson / detail
  702. A class for computing L2 error estimates, either nodally or elementally — hcarson / detail
  703. Reduced ErrorOrder_4D_DG_Pentatope_btest max grid size to reduce runtime — galbramc / detail
  704. Fixed uninitialized data with intel — galbramc / detail
  705. removed TopoDim from the for_each_XXX functions. Also added Topology::CellTopoDim, which gives the dimension of the topology for which Topology was a trace. — hcarson / detail
  706. Also made a GalerkinLib in the process of splitting out the local solve machinery for CG to use in the L2 proction solver — hcarson / detail
  707. fixing up unit tests to match new indicator calculation. Also changing mitState Nitsche to use the p independent lengthL. Will then need to choose constants properly some other way. — hcarson / detail
  708. A Nodal error estimate order test — hcarson / detail
  709. refactor into explicit instantiations and added GalerkinLib to a CMakeLists.txt I forgot — hcarson / detail
  710. more instantiations and fix a bug — hcarson / detail
  711. moving towards a CG L2 local projection. — hcarson / detail
  712. updating error estimate order tests. DG now uses the mitState BC, the CG one does not as it can't achieve the rates. There must be an instability in the adjoint.... — hcarson / detail
  713. Use CG local patch bcs for the local solve — hcarson / detail
  714. actually added the declaration to the header... — hcarson / detail
  715. Added a re-roll of the c++-14 make_unique feature — hcarson / detail
  716. Added a re-roll of the c++-14 make_unique feature — hcarson / detail
  717. first use of make_unique. — hcarson / detail
  718. ErrorEstimateL2 should now handle p0 or p1 estimation gracefully, and also actually handled that stupid merge conflict — hcarson / detail
  719. Fixed many clang analyzer complaints — galbramc / detail
  720. new MDG directory — arthuang / detail
  721. MDG integrand cell unit test passing — arthuang / detail
  722. changed name of test and added the notebook that generated the L2 error integrand tests — hcarson / detail
  723. forgot an mpi include — hcarson / detail
  724. all_reduce only works on POD not the KahanSum — hcarson / detail
  725. some tweaks — hcarson / detail
  726. interior trace w/ 1d unit test — arthuang / detail
  727. missed a bracket in the merge — arthuang / detail
  728. unit test to ensure boundary coordinates of 4d meshes are correct since these are frequently used in sandbox tests...and they are correct... — pcaplan / detail
  729. jacobian ping test added for cell,trace — arthuang / detail
  730. forgot to turn CG LG trace back on — hcarson / detail
  731. added CG sandbox for AD 2D+T problem. — cfrontin / detail
  732. Fixed more analyzer warningw — galbramc / detail
  733. fixed for push, incorporated hugh's mistakenly included preprocessor define. — cfrontin / detail
  734. more hugh fixes plus trueoutput fixes. — cfrontin / detail
  735. SolverInterfaceL2 project actually uses the correct local patch for CG now — hcarson / detail
  736. JEEEEENNNNKIONNNNSSSSS — cfrontin / detail
  737. added SA nitsche — arthuang / detail
  738. jacobian and residual unit tests passing — arthuang / detail
  739. Fixed typo — galbramc / detail
  740. jenkins punched me in the face *again*. — cfrontin / detail
  741. MDG solve works.. needs debugging — arthuang / detail
  742. grumble — cfrontin / detail
  743. VOLUME_WEIGHTED crept through on those last commits. It shouldn't have and this fixes that — hcarson / detail
  744. why oh why did i not save the fixes last time — cfrontin / detail
  745. preprocessor sandbox troubles. — cfrontin / detail
  746. dumb preprocessor stuff fix. — cfrontin / detail
  747. bad include habits fixed. — cfrontin / detail
  748. MDG solves! optimal rates! — arthuang / detail
  749. warning fix. — cfrontin / detail
  750. moved some includes into the cpps — hcarson / detail
  751. removed PrimalNeighbors and added in Vertex — hcarson / detail
  752. Created Vertex Local grid. Have the four cpp, but only Area is actually declared, others would have link errors. Also a super basic unsplit test — hcarson / detail
  753. getting closer to everything compiling — arthuang / detail
  754. moved jacobian calculations into output integrands for Galerkin. bunch of stuff still not working — arthuang / detail
  755. getting closer to passing unit tests.. — arthuang / detail
  756. unit tests updated — arthuang / detail
  757. unit test/compile fixes — arthuang / detail
  758. indentation warning — arthuang / detail
  759. last final last warning bother. — cfrontin / detail
  760. tidying solve3d_CG_AD_ST_toy — cfrontin / detail
  761. Added vertexMode to Local patch, and edgeMap constructor to LocalBase — hcarson / detail
  762. removed the vertex local specialist patch. It might eventually be faster, but the development time would be much much slower — hcarson / detail
  763. MDG jacobianfunctional in place, solves are compiling — arthuang / detail
  764. 3D+T pde stuff should be good to go. — cfrontin / detail
  765. made the central vertex always dof 0. Also added flag for whether patch comes from splitting an edge attached to the vertex — hcarson / detail
  766. MDG compiles fine but doesn't stabilize in advective limit. Hmm... — arthuang / detail
  767. forgot to include a PrimalNeighbors rename — hcarson / detail
  768. MDG working well again.. we have to figure out the Nitsche BCs — arthuang / detail
  769. Some of the updates from hypersonic before merging — blsc / detail
  770. change cb back to 2 to pass Jenkins — arthuang / detail
  771. 2D error order compiling — arthuang / detail
  772. add function hooks to 3DST — arthuang / detail
  773. added function hooks for 1d, 2d spacetime — arthuang / detail
  774. fieldweighted cell integrand for MDG — arthuang / detail
  775. Fix some issues that came up during debug build — blsc / detail
  776. added fieldweighted for MDG trace integrand — arthuang / detail
  777. More clang analyzer warning fixes. — galbramc / detail
  778. more needed function hooks — arthuang / detail
  779. change to isothermal wall BCs, push to hypersonic — arthuang / detail
  780. ughhhhhh more ndconvert troubles — arthuang / detail
  781. add isothermal to RANs BCs — arthuang / detail
  782. working towards the nodal model. Moving to laptop — hcarson / detail
  783. working towards local indicator — hcarson / detail
  784. added the Simplex meta class — hcarson / detail
  785. moving to lab box — hcarson / detail
  786. removed unused typedef — arthuang / detail
  787. Nightly fixes — galbramc / detail
  788. fixed mdg unit tests — arthuang / detail
  789. Propogating changed from develop — blsc / detail
  790. Nightly fixes — galbramc / detail
  791. reordered MDG jac, added error estimate cell — arthuang / detail
  792. merge conflict — hcarson / detail
  793. RANS cases working pretty well, pushing to hypersonic — arthuang / detail
  794. mdg error estimates in place — arthuang / detail
  795. took out adjointState functions (mostly) — arthuang / detail
  796. completed sourceJacobianHACK change. MDG adjoints not quite working... — arthuang / detail
  797. Think I've got all the updates from hypersonic — blsc / detail
  798. 4d cg fields starting up... — cfrontin / detail
  799. error estimate unit test passing, but sandbox case is off... — arthuang / detail
  800. mdg error estimates working! — arthuang / detail
  801. typo — arthuang / detail
  802. cleanup — arthuang / detail
  803. moved into the SANS namespace — hcarson / detail
  804. removed Topology template, used Simplex<TopoDim> instead — hcarson / detail
  805. fixed hack interface — arthuang / detail
  806. added sub-cell step matrix accessor with 1D and 2D unit tests — hcarson / detail
  807. added unit testing for 3D RANS fncs, other cleanup — arthuang / detail
  808. forgot a file — arthuang / detail
  809. sandbox edits — arthuang / detail
  810. complaining about includes? — arthuang / detail
  811. unused variables.. push to tucano for memcheck — arthuang / detail
  812. unit test name change — arthuang / detail
  813. missing definition — arthuang / detail
  814. trying to fix segfault — arthuang / detail
  815. fixed the warning, but there's a segfault somewhere in edgelocal3d... — arthuang / detail
  816. wow that was really dumb but took 4 hours to find — arthuang / detail
  817. putting Nitsche into stabilization object.. stil lin process — arthuang / detail
  818. premerge — arthuang / detail
  819. most things compiling... — arthuang / detail
  820. added affine invariant implied metric calculation — hcarson / detail
  821. nitsche parameter change complete.. things seem to compile ok — arthuang / detail
  822. member variables out of order — arthuang / detail
  823. Added unit tests for gravity term in PDETwoPhase2D + some cleanup — savithru / detail
  824. tweaks to get MDG working for systems — arthuang / detail
  825. fixed checks for parallel — arthuang / detail
  826. whoops switched back — arthuang / detail
  827. hopefully more correct for parallel? — arthuang / detail
  828. Nightly fixes — galbramc / detail
  829. Another nightly fix — galbramc / detail
  830. More nightly fixes — galbramc / detail
  831. Another nightly fix — galbramc / detail
  832. big refactor of the edge solve. Removed the cell group business, and now builds nodal models from the data of the edge solves. No testing quite yet, but it compiles! — hcarson / detail
  833. on the way to 4d-ification of CG... — cfrontin / detail
  834. Hopefully last warning fix — galbramc / detail
  835. more of the same... — cfrontin / detail
  836. minor edits that shouldn't affect anything — arthuang / detail
  837. Merge conflict resolution and formatting issues — blsc / detail
  838. added a cell->node map to the nodalview. Also fixed a bug with edge local not correctly identifying that a node can be common to both vertices without sharing a cell with the edge. Basically a real niche case — hcarson / detail
  839. added hashing function for GroupElemIndex. Uses boost::hash. Can now use unordered_set and unordered_map on GroupElemIndex. Should be faster in those cases where we don't need orderedness, only unique — hcarson / detail
  840. tiny tweaks. uses linspace — hcarson / detail
  841. tweaks to the affInv implied metric option. Also forgot to add the #if for reference step calc — hcarson / detail
  842. added some commented code for inspecting eigenvalues for a 2x2 system. Useful for debugging — hcarson / detail
  843. MDG with discontinuous efld.. does better! — arthuang / detail
  844. working towards error estimate from fine scale — arthuang / detail
  845. minor change to AGLS — arthuang / detail
  846. missed a function update — arthuang / detail
  847. push to hypersonic — arthuang / detail
  848. push to hypersonic — arthuang / detail
  849. few changes to MDG output — arthuang / detail
  850. mdg rans sandbox compiling — arthuang / detail
  851. extra args for output — arthuang / detail
  852. print resid bug fix — arthuang / detail
  853. MDG qp should initialize to zero — arthuang / detail
  854. Commented out some stuff (with developer exceptions), will have to go back to that code — blsc / detail
  855. Updated tolerances — blsc / detail
  856. Removed unused variables — blsc / detail
  857. add nitsche to mdg traces — arthuang / detail
  858. towards p= 1+ 3D+T AD... — cfrontin / detail
  859. update mdg solutiondata constructor — arthuang / detail
  860. experimenting w upwind bcs — arthuang / detail
  861. compiling — arthuang / detail
  862. moving to hypersonic — hcarson / detail
  863. Formatting fixes — blsc / detail
  864. experimenting with distance fcn gradients again — arthuang / detail
  865. fixing some bugs and moving to hypersonic — hcarson / detail
  866. another flag to turn off the metric dumping — hcarson / detail
  867. More vera warnings — blsc / detail
  868. separated Nitsche order and stabilization order — arthuang / detail
  869. Fixed unit test bug — blsc / detail
  870. changed FrobNormSq formula for MatrixSymS to exploit the symmetry — hcarson / detail
  871. added an inner product for VectorS. Can also handle a range of weighted inner products, with MatrixS, MatrixSymS and a diagonal — hcarson / detail
  872. added some instantiations, also started using the InnerProduct function directly — hcarson / detail
  873. dgbr2 joukowski w solver interfaces — arthuang / detail
  874. added some 3D+T CG stuff ... work in progress... added 1D+T AD for learning syntax, added a lot of comments. — cfrontin / detail
  875. changed to 1 pt quadrature implied metric calculation. — hcarson / detail
  876. added mean, min, max quality calculator and output in the NLOPT output — hcarson / detail
  877. linked the use of the modified model to the use of the SANS optimizer. No longer compile time flag — hcarson / detail
  878. removed VOLUME_WEIGHTED and added FULL_NODAL. This compile time flag needs to be set to run in the nodal view of the world. Long term this will be the way to go, but it only works in serial presently, so leaving it disabled by default — hcarson / detail
  879. forgot to fix the mpi bit — hcarson / detail
  880. apparently boost::mpi needs its own special minimum and maximum functions... — hcarson / detail
  881. shortened the file by removing unneeded commenting and dead space — hcarson / detail
  882. missing 4d instantiation and an attempt at removing the compiler error. At least I compiled gnu5 and couldn't recreate it... — hcarson / detail
  883. maybe this works? — hcarson / detail
  884. forgot that we can't actually dump 4d grids... — hcarson / detail
  885. changed the exception to a warning — hcarson / detail
  886. forgot to rename them edge tests — hcarson / detail
  887. sigh — hcarson / detail
  888. manually return group and elem to make intel happy. Also reduced the number of shuffles to 3 in the implied test — hcarson / detail
  889. changed the tolerances a little, should now be able to do more shuffles — hcarson / detail
  890. changed the initial condition for the optimization to Log Euclidean. Had a case where affine invariant failed the non-linear solve, so lets just skip that — hcarson / detail
  891. Increasing coverage — blsc / detail
  892. only doing 1 shuffle in 3D because the bloody coverage takes too long — hcarson / detail
  893. I swear... — hcarson / detail
  894. using the max in the implied calculation. The optimization is so much easier/faster — hcarson / detail
  895. added a 3d corner singularity and also made the 3D L2 adapt flag based — hcarson / detail
  896. tweaks to try speed this damn thing up and get it through jenkins — hcarson / detail
  897. correct beta val — hcarson / detail
  898. added more iterations to the AffInv calc, and use the FrobNorm from DLA — hcarson / detail
  899. save the last mesh, explicitly 2D folder, and Affine Invariant metric calculation — hcarson / detail
  900. added the objective of maximizing average quality, this is also not a good one, but unsure what to do... — hcarson / detail
  901. changed the range for the loops, so that the lower dof counts can be run serial — hcarson / detail
  902. More coverage — blsc / detail
  903. Nightly fixes — blsc / detail
  904. changed AffInv to throw exception and revert to Log Euclidean. Also raised the tolerance slightly, as the tolerance is done the norm. Thus sqrt(eps) = 1e-8, so setting tol to 1e-7 — hcarson / detail
  905. fixed betas. reset dump Metric to every iteration. changed 3D to dump the final qfld with the same filename — hcarson / detail
  906. use the max det met — hcarson / detail
  907. Cleaned up well models, modified fixed outflow rate well to use a distributed source term, added a new output function for computing bottom-hole pressure of fixed rate wells — savithru / detail
  908. temp patch for 4D grid io — cfrontin / detail
  909. switch to sine^4 exact solution for solve4d cases. — cfrontin / detail
  910. added outerproduct for VectorS — hcarson / detail
  911. Hopefully faster 3D eigen solves — galbramc / detail
  912. Forgot unit tests — galbramc / detail
  913. Added an enum class for adding quality to the implied metric objective, can do maximize or minimize inverse. Also InverseLengthTensor for calculating the metric. Also fixed up the AffineInvariant calculation to use the correct Gradient descent algorithm from Pennec, thus it actually works now. — hcarson / detail
  914. tweaks for cases — hcarson / detail
  915. much reduced the tolerance for the affine invariant calculation. The non-linear optimization is really not that bad, and it is the most theoretically justifiable metric, so we should use it — hcarson / detail
  916. some typo fixes, some documentary additions, some work on 4d CG field structures. CG not working yet for 4D w/ order > 1. needs some DEVEL EXCEPTIONS before push. — cfrontin / detail
  917. hypersonic changes — pcaplan / detail
  918. Added the correct output functional for computing the bottom-hole pressure of a fixed-rate well — savithru / detail
  919. a forgotten rename — hcarson / detail
  920. Fix for new 3D eigen value calculation — galbramc / detail
  921. Relaxed a tolerance — galbramc / detail
  922. debugging hell. — cfrontin / detail
  923. Fix intel leak. Better logic checking for refine. — galbramc / detail
  924. merge con — hcarson / detail
  925. moving to hype — hcarson / detail
  926. Updates to track CAD parameters with avro — galbramc / detail
  927. some comments. Also changed the affine invariant calculation to count the number of unconverged solves, record the maximum norm and also increased the tolerance — hcarson / detail
  928. moving branch — hcarson / detail
  929. stylish stylish jenkins — hcarson / detail
  930. Some fixes for avro. Show implied metric cost. — galbramc / detail
  931. changed the advection direction for the Triple BL. Was displaying low-rank structure (>p+1 convergence), suspect because of fluke with rotational symmetry — hcarson / detail
  932. actually using mpi properly hopefully. Also fixed the test for the affine invariant calc — hcarson / detail
  933. make the print to screen scientific so it's actually informative — hcarson / detail
  934. figured out xfield trace coordinates arent matching their element compadres. added unit tests, still not passing though. — cfrontin / detail
  935. Fixes for avro with full potential — galbramc / detail
  936. Fix typo and warning — galbramc / detail
  937. its an unsigned int not a Real you fool — hcarson / detail
  938. Fixes for CAD parameters with avro in parallel — galbramc / detail
  939. Fixed TraceToCellRefCoord_Pentatope. — cfrontin / detail
  940. 4d xfield trace coordinate ordering bug fixed and re-tested. back to working on cg construction. probably some nefarious stuff in 4d-land that needs to be exceptioned out, but currently only im in that region. — cfrontin / detail
  941. warning fix — cfrontin / detail
  942. remove debugging ifdef switch. — cfrontin / detail
  943. Updated Wake+avro tests with curvature — galbramc / detail
  944. Missed file dump — galbramc / detail
  945. still tryna pass jenkins. added avro switching. — cfrontin / detail
  946. add interfacest to Phil's localpatch to work with Hugh's — arthuang / detail
  947. ffs ifdef SANS_AVRO again — cfrontin / detail
  948. forgot to only report unconverged if actually unconverged — hcarson / detail
  949. fixed tracetocellrefcoord bug side-effects. everything truly broken should have developer exceptions too now. — cfrontin / detail
  950. fixed bug in volume output functional — arthuang / detail
  951. setting the values of beta to those espoused in the proof paper — hcarson / detail
  952. Changed the AD cases to use similar command line interface to the L2 cases. Changed the advection directions to not be aligned with diag. Changed the peclet numbers to be 25 for all cases (unitary advection magnitude), should give reasonable order convergence without wild dof counts. Also changed the exact output calculations to be symbolic, so we can change the advection and diffusion values without having to recalculate — hcarson / detail
  953. added x vs h and x vs AR dumping for the BL case. Doesn't really seem to show very much though, I think Masa was being cheeky — hcarson / detail
  954. making use DG element counts, should be quicker — hcarson / detail
  955. FULL_NODAL ON — hcarson / detail
  956. Unified and cleaned up output functionals for 2D two-phase. Added unit tests for BHP calculations. — savithru / detail
  957. Changed implied optimization from -Q to 1-Q. Fixes so full potential works with adaptation. — galbramc / detail
  958. Maybe fixed nightly warning — galbramc / detail
  959. Fixed build error — galbramc / detail
  960. Fixed warning — savithru / detail
  961. nightly fix — cfrontin / detail
  962. One more — savithru / detail
  963. A few more compile fixes — galbramc / detail
  964. vera fix 2.0 — cfrontin / detail
  965. VERA FFS A SEMICOLON?! — cfrontin / detail
  966. cleaning up some CG — arthuang / detail
  967. Put CostModel integration order back — galbramc / detail
  968. in the middle of getting CG w lifting operators — arthuang / detail
  969. forgot a file — arthuang / detail
  970. found the bug! — arthuang / detail
  971. CG w BR2 adapts up and running — arthuang / detail
  972. missing something... — arthuang / detail
  973. mod error order tests — arthuang / detail
  974. Added elementEdges function to get runtime edge maps — galbramc / detail
  975. Updates for new avro file layout — galbramc / detail
  976. deleting a defunct test — hcarson / detail
  977. deleting two defunct tests — hcarson / detail
  978. Fix for clang — galbramc / detail
  979. added edge split grids, uses a recursion for the time being. This can probably be avoided ultimately — hcarson / detail
  980. Added virtual function identifier isEdgeMode() and switched the logic for checking to that. Clearing the path to using Phil patch for edge solves — hcarson / detail
  981. Fixes for g++-9 — galbramc / detail
  982. Removed the avro instance — galbramc / detail
  983. Added an edge local constructor to LocalPatch. Tested a little bit. It works, and also, it appears to basically prove there was a bug in EdgeLocal — hcarson / detail
  984. Fix weekly clang compile error — galbramc / detail
  985. Fixed weekly memory leaks — galbramc / detail
  986. moving back towards MDG stuffs — arthuang / detail
  987. forgot a file — arthuang / detail
  988. copyright vera error — arthuang / detail
  989. got rid of whitespace — arthuang / detail
  990. making things consistent for Nitsche, MDG — arthuang / detail
  991. got rid of avro include — arthuang / detail
  992. missed a update on nitsche — arthuang / detail
  993. fixedu nit test — arthuang / detail
  994. update error order test — arthuang / detail
  995. Added ksabo@mit.edu to DeveloperEmailAddresses — ksabo / detail
  996. relax tol for intel — arthuang / detail
  997. made LocalPatch work with the Edge patch. Also set the defaults for Corner Singularity to the ones used by Masa — hcarson / detail
  998. tweaks and bits — hcarson / detail
  999. vera fix — pcaplan / detail
  1000. more vera fixes.. — pcaplan / detail
  1001. avro interface fixes.. — pcaplan / detail
  1002. curly braces... — pcaplan / detail
  1003. curly braces again... — pcaplan / detail
  1004. whitespace + tab — pcaplan / detail
  1005. more vera fixes................. — pcaplan / detail
  1006. ckf vera fixes — pcaplan / detail
  1007. merge of ckf test — pcaplan / detail
  1008. whether dummy or input mesh, result is the same — pcaplan / detail
  1009. updated tolerances for unit tests — ksabo / detail
  1010. explicit constructor for nightly — pcaplan / detail
  1011. More zombies for Edge local solves — galbramc / detail
  1012. Updated valgrind version — galbramc / detail
  1013. Fixed array out of bound — galbramc / detail
  1014. refine did nothing! — galbramc / detail
  1015. pre merge — hcarson / detail
  1016. jenkins fixes — hcarson / detail
  1017. forgot a change — hcarson / detail
  1018. stupid parenthesis — hcarson / detail
  1019. changes to test localpatch for edge — hcarson / detail
  1020. removing some more erroneous testing — hcarson / detail
  1021. removing even more erroneous testing — hcarson / detail
  1022. unused variables — hcarson / detail
  1023. Fixes for tracking parameter space with EGTessModel — galbramc / detail
  1024. Dissable one avro wake test — galbramc / detail

#242 (Jun 29, 2019, 1:52:09 AM)

  1. changing branch — hcarson / detail
  2. MC for running on hypersonic — hcarson / detail
  3. ready for running on hypersonic — hcarson / detail
  4. Generalized valgrind suppression — galbramc / detail
  5. moving to hypersonic again — hcarson / detail
  6. egads coords must have 3 dimensions even in 2d — pcaplan / detail
  7. the final files from the project — hcarson / detail
  8. forgot a function — hcarson / detail
  9. pushing to tucano — arthuang / detail
  10. Suppressed CMakeLists errors. [TBD] — shunz / detail
  11. Fixed panel metod tests — shunz / detail
  12. AFLR4 updates and some Jenkins scripts — galbramc / detail
  13. Link tetgen before avro — galbramc / detail
  14. instantation of elementlocal version of local splits for 4d...unit test will fail because the result is different than savi's convention — pcaplan / detail
  15. missing definitions for elementlocal & edgelocal — pcaplan / detail
  16. some instantiations of savi's method for doing local splits — pcaplan / detail
  17. xfield_lagrange method of doing local splits...still debugging...will fix later... — pcaplan / detail
  18. Refactoring.  Patched unit tests — shunz / detail
  19. More unit tests — shunz / detail
  20. added unit tests — shunz / detail
  21. Fixed unit tests — shunz / detail
  22. Fixed IBL unit tests — shunz / detail
  23. Added unit test.  Turned off unused methods. — shunz / detail
  24. Fixed a bug in CMakeLists: use of out-of-scope variable — shunz / detail
  25. Fixed a bug in cmake files that only appear when building with Xcode — shunz / detail
  26. Refactored ping test input array type.  Fixed IBL-related 4x4 block system ping tests.  Added missing MPI-related method definitions for pure virtural methods — shunz / detail
  27. Relocated code into SANS_MPI macros; otherwise, errors are raised about "member access to incomplete type" — shunz / detail
  28. Verified/fixed/cleaned IBL system tests with transition (full upwind). — shunz / detail
  29. Fixed duplicate naming of boost test suite — shunz / detail
  30. Relaxed pyrite tolerance — shunz / detail
  31. Updated forced-transition pyrite files after the bug fix in commit b30121ee5531d91e84aac94fbdab6462f458f4f8 — shunz / detail
  32. Turned off file dump — shunz / detail
  33. Fixed formatting — shunz / detail
  34. Fixed empty traling line — shunz / detail
  35. Fixed DG and HDG AES tests for uncoupled IBL — shunz / detail
  36. Fixed formatting — shunz / detail
  37. Reverted changes to (viscous) HDG stuff: those abandoned changes treated qfld and afld as a single bundle field — shunz / detail
  38. Update AlgebraicEquationSet_HDGAdvective_Advection_btest.cpp — shunz / detail
  39. Fixed one more test affected by ping test refactoring.  Fixed formatting and screen output — shunz / detail
  40. Fixed another system test affected by IBL Qauxv interpreter refactoring — shunz / detail
  41. Update ErrorOrder_1D_HDGAdvective_Advection_btest.cpp — shunz / detail
  42. Fixed warning and missing instantiation — shunz / detail
  43. Added an instantiation just for completeness, although it is no longer used — shunz / detail
  44. moving towards adjoint GLS — arthuang / detail
  45. Cleaned sandbox cases — shunz / detail
  46. relaxed tolerances for clang_release — shunz / detail
  47. Suppressed output — shunz / detail
  48. Fixed bugs in CMakeLists — shunz / detail
  49. Fixed HDG advection tests — shunz / detail
  50. Removed the pure advection test case using (viscous) HDG machinery — shunz / detail
  51. parallel outputs in galerkin solver interface, AGLS error estimation fixed? — arthuang / detail
  52. Refactored halving line search and fixed unit tests — shunz / detail
  53. Fixed memory errors — shunz / detail
  54. Relaxed tolerance for intel — shunz / detail
  55. relaxed tolerances for intel18 — shunz / detail
  56. Relaxed timeout limits — shunz / detail
  57. Speed up unit tests in response to Jenkins timeout — shunz / detail
  58. Fixed typo — shunz / detail
  59. Relaxed tolerance for gnu48 — shunz / detail
  60. Tried to fix timeout on Jenkins testing (coverage_clang reynolds) — shunz / detail
  61. Reverted CMakeLists to see if TIMEOUT is set properly this time on Jenkins — shunz / detail
  62. minor refactoring — shunz / detail
  63. Refactored CMakeLists for Xcode build — shunz / detail
  64. Refactored Newton solver — shunz / detail
  65. Minor fix — shunz / detail
  66. Fixed warnings — shunz / detail
  67. Added IBL max update fraction — shunz / detail
  68. Enabled under-relaxed Newton update for coupled 4x4 block system of IBL with free transition. — shunz / detail
  69. Refactor of avro XField interface — galbramc / detail
  70. Consistent logic for setting cmake testing timout property — galbramc / detail
  71. Fixed refine interface change — galbramc / detail
  72. Fix ifdef when not using avro — galbramc / detail
  73. More fixes to deal with avro — galbramc / detail
  74. Minor cleanup — galbramc / detail
  75. Added unit tests for IBL updateFraction — shunz / detail
  76. Upgrade PETSc — galbramc / detail
  77. More avro and PETSc tweaks — galbramc / detail
  78. I don't understand why dl library is needed to link a static library... — galbramc / detail
  79. Fix for refine check — galbramc / detail
  80. Suppress compiler warning when building PETSc — galbramc / detail
  81. Fix for avro with 4D — galbramc / detail
  82. Enable refine testing again — galbramc / detail
  83. Updated copyright date to 2019 — galbramc / detail
  84. Updated copyright date to 2019 — galbramc / detail
  85. dimension-independent local splits — pcaplan / detail
  86. timing tests show dim-independent implementation on par with savithru's impl...tried to debug hugh's local xfield in primal mode but something is wrong...unit tests on the way — pcaplan / detail
  87. adding stabilized error estimation infrastructure — arthuang / detail
  88. more playing with AGLS — arthuang / detail
  89. minor edits — arthuang / detail
  90. reconciling merge conflicts and some tweaks — hcarson / detail
  91. license updates — hcarson / detail
  92. fixes to match avro — hcarson / detail
  93. forgot to add the avro defined precompile check — hcarson / detail
  94. relaxed tolerances and forgot to split world — hcarson / detail
  95. tweaking tol again... — hcarson / detail
  96. another tweak... — hcarson / detail
  97. cleanup of localpatch + commenting — pcaplan / detail
  98. copyright — pcaplan / detail
  99. more copyright — pcaplan / detail
  100. Updates for MOESS optimizations. Still needs more work. — galbramc / detail
  101. Instantiations for 4D AD solve. — galbramc / detail
  102. A few fixes — galbramc / detail
  103. Compile fixes — galbramc / detail
  104. More instantiations for 4D — galbramc / detail
  105. removed anachronistic definition of primal grid. Primal grid now matches the behavior of the normal DG grids. Unit tests have just been turned off in the meantime — hcarson / detail
  106. make sure mpi is init'd before calling rank by actually running in parallel — pcaplan / detail
  107. revert back to dual — pcaplan / detail
  108. ifdef SANS_AVRO for tests with CKF triangulation — pcaplan / detail
  109. changed to Dual in the system test — hcarson / detail
  110. attempted to fix nightly tests — shunz / detail
  111. Relaxed timings, fixed warning — galbramc / detail
  112. Updated pyrite files to fix nightly tests — shunz / detail
  113. Moved timing test into sandbox — galbramc / detail
  114. Cleanup of refine interface with auto memory management. — galbramc / detail
  115. Modest progress on instantiations. — cfrontin / detail
  116. Fix include — galbramc / detail
  117. 4D box unit grid grandfathered out of XField_KuhnFreudenthal. — cfrontin / detail
  118. added fix to 3D — hcarson / detail
  119. removed the separate 4D file, just added an instantiate at the end of 3D — hcarson / detail
  120. p=7 led to error close to machine zero, which seemed to cause touble to nightly ErrorOrder test.  Cut back p from 7 to 6 — shunz / detail
  121. p=6 still too high for pyrite test for ErrorOrder — shunz / detail
  122. Attempted to warning "use of zero-allocated memory" — shunz / detail
  123. Some cleanup in the sandbox. Added 2D L2Project adaptation — galbramc / detail
  124. Added tecplot dump for metric fields. Other small fixes — galbramc / detail
  125. Changed floor to round for generating new 1D mesh — ursachi / detail
  126. Minor refactoring — shunz / detail
  127. Compile fixes and more dependency warning suppressions — galbramc / detail
  128. Add dl library for avro — galbramc / detail
  129. Replaced nt transport equation with G variable as in SciTech paper, although the results are equivalent — shunz / detail
  130. bits and pieces — hcarson / detail
  131. added linear args and a test — hcarson / detail
  132. just wanna get my stuff in the repo — pcaplan / detail
  133. Files for parallel periodic XField2D_Box_Triangle_Lagrange (Issues need to be fixed) — kug46 / detail
  134. retrieve edge indices and sub elems from split — pcaplan / detail
  135. ref coordinates on split sub cells — pcaplan / detail
  136. Added a layer of abstractions when evaluating fluxes, sources etc. in IBL pde class — shunz / detail
  137. Fixed formatting... previously went under the radar since vera++ was not installed locally... — shunz / detail
  138. inst of some 4d adaptation things — pcaplan / detail
  139. Added scalar and dot product fixes for MatrixSymS — galbramc / detail
  140. Working on 3d ST... — cfrontin / detail
  141. Enabled smooth laminar/turbulent blending — shunz / detail
  142. Fixed SVD calculation for normal vector for 4D tet. — cfrontin / detail
  143. Scrubbed some comments. — cfrontin / detail
  144. edits to gls error estimation — arthuang / detail
  145. unit tests for basis function ref elem split — pcaplan / detail
  146. 4d adapt? — pcaplan / detail
  147. Fixed intel errors by relaxing tolerance and reconciling a missing pyrite file specialized for intel MKL — shunz / detail
  148. added a Field weighted stabilized CG nodal estimate integrand test in 2D — hcarson / detail
  149. comment — hcarson / detail
  150. Continued work on ElementXField implementations. — cfrontin / detail
  151. Vera fixes, COPYRIGHT fixes, and some avro preprocessor fixes. — cfrontin / detail
  152. Updates for 2D L2 Projection sandbox test — galbramc / detail
  153. Updates for 1D L2 Projection sandbox test — galbramc / detail
  154. Clearing out high-level exceptions whose low-level implementations are done. — cfrontin / detail
  155. Added last bits of ADST4D case, should run (?) now. — cfrontin / detail
  156. Added new trace free step matrix error model. Not enabled. — galbramc / detail
  157. added a 2D error estimate test, and asserted assumption on basis function type — hcarson / detail
  158. Fix. — cfrontin / detail
  159. fixed the estimate vary tests — hcarson / detail
  160. notebook with Double BL exact solutions — hcarson / detail
  161. forgot the copyright change — hcarson / detail
  162. Normalize MOESS optimization with nlopt — galbramc / detail
  163. Fixed undefined reference — galbramc / detail
  164. Fixed a bug in laminar/turbulent blending function — shunz / detail
  165. ifdef SANS_AVRO requirements in unit tests. — cfrontin / detail
  166. removed the scp to devastator. Should be useful for everyone now — hcarson / detail
  167. forgot to change a quadratic function explicit constructor — hcarson / detail
  168. undoing a print — hcarson / detail
  169. EQUILATERAL PENTATOPE coordinates + added unit volume check in unit test to catch this — pcaplan / detail
  170. unit test for split ref step matrix on pentatopes + generating matlab script — pcaplan / detail
  171. unit tests for error model — pcaplan / detail
  172. 4D L2 ERROR ADAPTATION WORKS...cleaning up........ — pcaplan / detail
  173. Added new MOESS optimization without global FrobNorm — galbramc / detail
  174. Forgot CMake file — galbramc / detail
  175. CG artificial viscosity in 2D — blsc / detail
  176. Small fix for cmake summary — galbramc / detail
  177. Weekly test fixes — galbramc / detail
  178. Modified AlgEqSet, IntegrandInteriorTrace and 2D DGAdvective toy for Parallel 2D Periodic Grids — kug46 / detail
  179. Towards parallel PETSc/TAO — galbramc / detail
  180. Refactored intermittency calculation — shunz / detail
  181. Generailized Projection to Qauxi to handle blended intermittency. — shunz / detail
  182. Trying to bump coverage. — cfrontin / detail
  183. Some cleanup of logEuclidian cost — galbramc / detail
  184. Added lagrange P1 to the exception — hcarson / detail
  185. copywrite update for some files — arthuang / detail
  186. Various small fixes — galbramc / detail
  187. added a Tanh2 function based on Loseille's Tanh3 — hcarson / detail
  188. Updated Embedding unit test for quadrature integration — galbramc / detail
  189. Reverted to binary intermittency as default — shunz / detail
  190. Relaxed tolerance for intel compiler.  Restored default to binary intermittency for existing tests — shunz / detail
  191. Trying to get coverage... — cfrontin / detail
  192. Tests added + un-tested, unused additions removed. — cfrontin / detail
  193. Added comments and made sure ADST4D case is ready for parallelization. — cfrontin / detail
  194. More parallel fixes. — cfrontin / detail
  195. Relaxed torleranc for gnu48 — shunz / detail
  196. More parallel fixes. — cfrontin / detail
  197. Added regularized point source to accommodate potential co-existence of free and forced transition in the captured transition treatment — shunz / detail
  198. Updated ADST3D cases (solve and adapt) for avro and MPI use. — cfrontin / detail
  199. Forgot an MPI redefine. — cfrontin / detail
  200. jk MPI fix actually this time. — cfrontin / detail
  201. Minor fix — galbramc / detail
  202. Continued avro- and MPI-ification. — cfrontin / detail
  203. Unit testing fixes. — cfrontin / detail
  204. Fixed warning. — cfrontin / detail
  205. Fixed fstream initializer. — cfrontin / detail
  206. Warning cleanup... — cfrontin / detail
  207. Fixes towards parallel+periodic — galbramc / detail
  208. Coverage improvement... — cfrontin / detail
  209. cleanup of interface to match savithru's — pcaplan / detail
  210. instantiation of 4d savithru splits (technically the extraction works because that's what i started with but the actual split does not) — pcaplan / detail
  211. Fixes for running parallel DG with periodic BCs — galbramc / detail
  212. Removed adapt4d skeleton from build. — cfrontin / detail
  213. Added instantiation — galbramc / detail
  214. ffs — cfrontin / detail
  215. instantiate SVD (with error), XField_Local calls XField_LocalPatch in 4d which local_split_patch is turned off — pcaplan / detail
  216. ifdef sans avro in sandbox file — pcaplan / detail
  217. instantiation of new MOESS SANS optimizer for 4d — pcaplan / detail
  218. experimenting w p1 adjoint — arthuang / detail
  219. adapt3d change in api — pcaplan / detail
  220. relaxed tolerance for system test — pcaplan / detail
  221. publicize error model functions...still not sure why — pcaplan / detail
  222. added note about protected methods for error model class — pcaplan / detail
  223. missing operator for 1d function — pcaplan / detail
  224. unprotected from SANS_AVRO avro namespace use — pcaplan / detail
  225. rename file to avoid copyright check — pcaplan / detail
  226. deleted file — pcaplan / detail
  227. Only have vera look at .cpp and .h files — galbramc / detail
  228. SANS_CHECK_CLOSE not BOOST_CHECK_EQUAL for floats, come on philip — pcaplan / detail
  229. bug != in shock capturing — arthuang / detail
  230. revert back to formulation — arthuang / detail
  231. add expt stab (no-op) to 2DAD — arthuang / detail
  232. Added a C2 continuous smooth abs — hcarson / detail
  233. fix intel compiler warning — pcaplan / detail
  234. add pending changes in local patch header — pcaplan / detail
  235. Run SANS_Commit in parallel — galbramc / detail
  236. Cannot specify format for 'time' on all systems — galbramc / detail
  237. Updates to SANS_Commit.sh — galbramc / detail
  238. One more parallel fix — galbramc / detail
  239. Forgot to run 'make all' — galbramc / detail
  240. Fix make warning for now — galbramc / detail
  241. dev exceptioned code required only for 4d tecplot. — cfrontin / detail
  242. added a C2 smoothabs and matlab file that generated — hcarson / detail
  243. actually got the smoothmax1, smoothmax2 functions work, also added implicitly defined smoothmin1 and smoothmin2 — hcarson / detail
  244. merge fix — cfrontin / detail
  245. merge fix 2 — cfrontin / detail
  246. working on new error models — hcarson / detail
  247. ASExpCombo function for testing L2 — hcarson / detail
  248. Revive Adapt L2Project — galbramc / detail
  249. partial cleanup of local patch before supporting CG patches — pcaplan / detail
  250. Removed PBAM — galbramc / detail
  251. fix for jenkins, smoothmax2, tweaks to SANS opt and the VectorX hack to work with Phil — hcarson / detail
  252. unparallelized a test, there's a bug in P4 Hierarchical parallel — hcarson / detail
  253. turning the P3 and P4 unsplit tests off again. There's something weird and MPI-ish going wrong here — hcarson / detail
  254. Missed one include — galbramc / detail
  255. Missed one more file — galbramc / detail
  256. more cleanup of local patch — pcaplan / detail
  257. Suppress valgrind avro+intel strange warnings — galbramc / detail
  258. Broke up DGBR2lib trying to reduce compile time — galbramc / detail
  259. pre merge — hcarson / detail
  260. support for CG local solves with XField_LocalPatch — pcaplan / detail
  261. forgot to propagate changes in function names to tests — pcaplan / detail
  262. turnon off local patch splits for jenkins — pcaplan / detail
  263. silence warning — pcaplan / detail
  264. Switched implied metric optmizer to MMA — galbramc / detail
  265. agls tweaks — arthuang / detail
  266. Relaxed tolerance — galbramc / detail
  267. complete unit tests for xfield local patch...still need some work on CG tests — pcaplan / detail
  268. merge conflict — hcarson / detail
  269. a stupid bug — hcarson / detail
  270. changes to optimizers, and also turning the modified model back off — hcarson / detail
  271. Fix work weekly — galbramc / detail
  272. Weekly suppression and revived cotire — galbramc / detail
  273. Fixed the last error. — galbramc / detail
  274. Fixed a warning — galbramc / detail
  275. Added option to use CG field for PTC time step — galbramc / detail
  276. Changed the span of the SANS frob norm penalty function — galbramc / detail
  277. unit tests for DG/CG patches — pcaplan / detail
  278. remove print_inline — pcaplan / detail
  279. Conical method of stroud added, and working. Still needs integration into pentatope. — cfrontin / detail
  280. Added a ego map to EGTessModel that maps from All egos to Unique egos — galbramc / detail
  281. add xfield for full potential code using avro — pcaplan / detail
  282. Integrated Stroud into 4D quadrature. — cfrontin / detail
  283. cleanup avro wake3d — pcaplan / detail
  284. Fixed compile error — galbramc / detail
  285. Fixed another compile error — galbramc / detail
  286. work towards high-order support for local patch split — pcaplan / detail
  287. getting unit tests to pass... — arthuang / detail
  288. fixing merge conflicts — arthuang / detail
  289. Fix up PseudoTime_btest — galbramc / detail
  290. Fixed btest memory leak. — cfrontin / detail
  291. Improved stroud testing. — cfrontin / detail
  292. experimenting with an element based local solve — arthuang / detail
  293. BCNone is dead. Long live BCNone. — hcarson / detail
  294. New Implied Metric optimizer based on logM. Various other small fixes. — galbramc / detail
  295. elemID must be global — pcaplan / detail
  296. support for high-order local patch — pcaplan / detail
  297. ifdef avro — pcaplan / detail
  298. Updates for CG 3D Euler with shock capturing and 2D RANS — blsc / detail
  299. multiple def from copy paste — pcaplan / detail
  300. uninitializaed data fix (typo) — cfrontin / detail
  301. changes to error model interface for high-order local splits — pcaplan / detail
  302. Removing problematic instantiations due to wall distance parameter with artificial viscosity for RANS — blsc / detail
  303. add info as to which type of field is being sampled — pcaplan / detail
  304. Removing code from BCEuler3D_mitState.h which was ifdef'd out — blsc / detail
  305. added integer template for equation number — hcarson / detail
  306. typo in avro wake — pcaplan / detail
  307. specialized wake model not defined without avro — pcaplan / detail
  308. added an ND test of the BCNone with and without useFluxViscous — hcarson / detail
  309. Galerkin folder passes — hcarson / detail
  310. added the downcast to NoneBC to extract the boolean — hcarson / detail
  311. converted HDG over to the new Nones — hcarson / detail
  312. Updated implied metric for TAO. Fixed a number of floating point problems. — galbramc / detail
  313. More robust testing, compiler warning silencing. — cfrontin / detail
  314. dont inherit from xfield_avro if not defined — pcaplan / detail
  315. still missing some ifdef — pcaplan / detail
  316. Various compile fixes. Generalized Adapt2D_Mesh_Optimize for all mesh generators. — galbramc / detail
  317. Missed one — galbramc / detail
  318. Warning fixes — galbramc / detail
  319. killed a few more BCTypeNone references, just plugging away — hcarson / detail
  320. pre merge — hcarson / detail
  321. Removed the BCNoneUniField — hcarson / detail
  322. Added switching for expensive PI quadrature/low-cost NI quadrature. Fixed associated tests to get correct convergence rates. — cfrontin / detail
  323. committing sandbox pre-merge — arthuang / detail
  324. someone forgot to actually use the W and B typedefs — hcarson / detail
  325. missing include — hcarson / detail
  326. fixed the CMakeLists.txt — hcarson / detail
  327. made BCNone_AV to do with annoying ArtVisc feature — hcarson / detail
  328. missing includes and last bit — hcarson / detail
  329. fixed typo: derived to dervied — hcarson / detail
  330. vera slap correction — hcarson / detail
  331. Fixed one more BCNone — galbramc / detail
  332. forgot a file — hcarson / detail
  333. Removing more of the block artificial viscosity stuff in 2D and unit test updates — blsc / detail
  334. More merge conflicts — blsc / detail
  335. More merge conflict resolution — blsc / detail
  336. Fixed memory leak. — cfrontin / detail
  337. used quadrature cache for L2 projection — pcaplan / detail
  338. fix for order = 0 integration — pcaplan / detail
  339. New cost target for SANS MOESS optimizer. Lots of work towards avro+Wakes. — galbramc / detail
  340. Fixed typo — galbramc / detail
  341. Minor fixes — galbramc / detail
  342. One more typo — galbramc / detail
  343. Unit test updates — blsc / detail
  344. Helps to use consistent array size — galbramc / detail
  345. Updates to jenkins scripts — galbramc / detail
  346. Segregating MeshAdapter — galbramc / detail
  347. Missing instantiation — blsc / detail
  348. Fixed mistake in BuildAVRO — galbramc / detail
  349. Fixes for 3D CG case with artificial viscosity — blsc / detail
  350. Fixed compile issues related to separating dimensions — galbramc / detail
  351. Initializing variables to fix some compiler warnings — blsc / detail
  352. LU factorization on processors so PETSc solves reliably — blsc / detail
  353. Missed a few — galbramc / detail
  354. IRS updates — blsc / detail
  355. Fix for gnu 4.8 — galbramc / detail
  356. Refactored tecplot output to reduce link time — galbramc / detail
  357. Forgot files — galbramc / detail
  358. Fixed muliple instantiations — galbramc / detail
  359. pre merge — pcaplan / detail
  360. Syncing with hypersonic — blsc / detail
  361. reverting a dead end — arthuang / detail
  362. Adapt4D de-mothballing. — cfrontin / detail
  363. Fixed 'potential' memory leak problem by putting frees in same scope as creation. — cfrontin / detail
  364. Suppress cppcheck bug — galbramc / detail
  365. tweaked AGLS setup, hope this one gets through!! — arthuang / detail
  366. AGLS formulation w/ correction getting good rates! push to laptop, need to fix unit tests — arthuang / detail
  367. unit tests should be working... — arthuang / detail
  368. pre merge — hcarson / detail
  369. Another cppcheck suppression — galbramc / detail
  370. clean up on choosing reSolve groups — hcarson / detail
  371. some clean up — hcarson / detail
  372. added a virtual method for computing Initial Error. The default version has the overhead of a solve associated, whereas the SolverInterface version has the cheaper version that avoids the solve and thus is more robust — hcarson / detail
  373. parameter for avro to allow for interior boundaries needed for wake models — pcaplan / detail
  374. unit tests ready to go — arthuang / detail
  375. Adding 4D Legendre basis for Adapt4D + error estimates. — cfrontin / detail
  376. cmake addition of 4d legendre... still not finished though. — cfrontin / detail
  377. oops — cfrontin / detail
  378. don't use Philip's split for now — arthuang / detail
  379. add nb for output correction — arthuang / detail
  380. got rid of a unnecessary sandbox, updated other test — arthuang / detail
  381. One less call to checkGrid for curved LocalPatch — galbramc / detail
  382. More IRS stuff — blsc / detail
  383. moved metric conformity to separate file — pcaplan / detail
  384. tried to assess metric conformity and re-adjust target cost but simpler to just ask the mesher and have inner loop on adaptations to control target cost — pcaplan / detail
  385. pushing to hypersonic — arthuang / detail
  386. some fixes to actually use the volume factor... — pcaplan / detail
  387. new elemental error estimate for CG, not especially tested but seems to be ok — hcarson / detail
  388. more tweaks to cases — hcarson / detail
  389. Add static caching for pentatope quadrature. — cfrontin / detail
  390. Set edge length bound = 1 for 1D — ursachi / detail
  391. Added exponential and maxcubic functions — ursachi / detail
  392. 1D test cases — ursachi / detail
  393. std::stringstream has a surprisingly expensive constructor — galbramc / detail
  394. Fixed formatting — galbramc / detail
  395. Added missing copyright — galbramc / detail
  396. Added missing includes — galbramc / detail
  397. include set — pcaplan / detail
  398. merge — pcaplan / detail
  399. still default to savithru's local split — pcaplan / detail
  400. protect quadrature tests with use_conical — pcaplan / detail
  401. Deleted unnecessary includes — ursachi / detail
  402. changes to make avro grids compile again — hcarson / detail
  403. cleanup and forgotten files — hcarson / detail
  404. Progress towards avro+Wakes. Added intel19 to jenkins env. — galbramc / detail
  405. Quadrature fix. — cfrontin / detail
  406. Added Legendre4D Bases. — cfrontin / detail
  407. Adapt4D ADST should *start*. — cfrontin / detail
  408. Remove files dumped by avro — galbramc / detail
  409. Fixed missing parameter checks — galbramc / detail
  410. New CFL evolution logic (ifdef'd out) — blsc / detail
  411. Missed a file — blsc / detail
  412. Improved speed of XField_LocalPatch — galbramc / detail
  413. Allow longer time for slow test — galbramc / detail
  414. debug CG local patch — pcaplan / detail
  415. Update UniqueTrace to use UniqueElem — galbramc / detail
  416. forgot a multiply — blsc / detail
  417. Added 4D pentatope Legendre unit tests. — cfrontin / detail
  418. Complete Legendre 4D test. — cfrontin / detail
  419. Actually this time. — cfrontin / detail
  420. Universalized legendre max order, refactored variable. — cfrontin / detail
  421. first errormodel additions. — cfrontin / detail
  422. Updating the delta wing case — galbramc / detail
  423. Fixed compile errors — galbramc / detail
  424. reference element tested and ready to fly. — cfrontin / detail
  425. More compile fixes for DeltaWing. avro works again with it. — galbramc / detail
  426. Logic updates for PTC to hypersonic — blsc / detail
  427. Skip blank backtrace numberes. Lots of work towards avro+Wakes — galbramc / detail
  428. Fixed test for lagrange basis function spacetime, moving coords to inherited class from base class. — cfrontin / detail
  429. warning fix, you dumbass\! — cfrontin / detail
  430. Fixed up hashing and added unit tests for UniquElem — galbramc / detail
  431. fixed cross-machine tolerancing issue. — cfrontin / detail
  432. IRS updates — blsc / detail
  433. Lots of fixes for avro+Wakes — galbramc / detail
  434. Don't dump file — galbramc / detail
  435. pre merge — hcarson / detail
  436. Reduce testing in MOESS_Gradation_Optimizer_NLOPT_btest — galbramc / detail
  437. new and improved AGLS formulation — arthuang / detail
  438. premerge — pcaplan / detail
  439. Use operator() to modify avro topologyDup — galbramc / detail
  440. Updated linesearch with missing status variables — blsc / detail
  441. Add backtrace info to singular matrix. Enable VERA_ERROR for all builds with SANS_Commit.sh — galbramc / detail
  442. Quadrature fixes — galbramc / detail
  443. Removed unnecessary line — galbramc / detail
  444. Add vera to CentOS and Rhel. Undo some fixes. — galbramc / detail
  445. Added boost to LD_LIBRARY_PATH on CentOS — galbramc / detail
  446. Guard against negative nodal metrics from ImpliedMetic optimizer — galbramc / detail
  447. Updated avro and refine build to work with .tgz files — galbramc / detail
  448. Updated build of lapack and avro build to use SANS lapack — galbramc / detail
  449. Forgot to remove test hack — galbramc / detail
  450. Fixed mistake in FindLAPACK — galbramc / detail
  451. Add more diagnostics to Jacobian failure with RefCoordSolver — galbramc / detail
  452. More debug info for singular RefCoordSolve — galbramc / detail
  453. Missing include — galbramc / detail
  454. GRRRRRRRRRRRRRRRR CELL GROUP 1 NEEDS  TO BE ADDED TO RESOLVE CELL GROUPS FOR CG GRRRRRRRRRR (╯°□°)╯︵ ┻━┻ — pcaplan / detail
  455. got rid of hackery — pcaplan / detail
  456. extra space — pcaplan / detail
  457. Working towards scale invariant DenseLinAlg solves — galbramc / detail
  458. line unit test should really allow edge split since its the same as an iso split, vera fixes too — pcaplan / detail
  459. cleanup of unused debugging stuff...what a colossal waste of time — pcaplan / detail
  460. trailing whitespace — pcaplan / detail
  461. Update vera to remove scripts when warn/error is changed. Add limits inlcude where numeric_limits is used. — galbramc / detail
  462. reverting to new AGLS formulation — arthuang / detail
  463. reverting to not use Philip's split to get thru Jenkins — arthuang / detail
  464. silence warning — pcaplan / detail
  465. Updates to CMake files — savithru / detail
  466. Fix quadrature memory leak again — galbramc / detail
  467. trying to solve pivot problem... not yet though. — cfrontin / detail
  468. added assert grid. Wraps check grid in a try-catch and return true if it passes. Can use in places where checkGrid can be removed in Release mode — hcarson / detail
  469. pre merge — hcarson / detail
  470. Updates so avro+Wake appears to be working — galbramc / detail
  471. fixed ReferenceElement constraint jacobian assignment ya dingus. — cfrontin / detail
  472. fixed ReferenceElement constraint jacobian assignment ya dingus, pt. II: unit testing boogaloo — cfrontin / detail
  473. Removed pivoting change that was dumb anyway. — cfrontin / detail
  474. Combined into one file — ursachi / detail
  475. sandbox updates — arthuang / detail
  476. moving towards rans adaptive cg — arthuang / detail
  477. RANS test case working — arthuang / detail
  478. rans joukowski working for real? — arthuang / detail
  479. Fixed link errors — galbramc / detail
  480. More fixes for avro+Wake. Needs some more checks. — galbramc / detail
  481. Forgot files — galbramc / detail
  482. Fixed compile error — galbramc / detail
  483. Split up the Adaptation library by dimension — galbramc / detail
  484. Compile error fix — galbramc / detail
  485. Fix link errors — galbramc / detail
  486. Another link error — galbramc / detail
  487. Migrated single boundary layer scalarfunction from 4D to 3D+T — cfrontin / detail
  488. Remove debug files — galbramc / detail
  489. Don't run avro with wakes due to failing debug dumps in avro — galbramc / detail
  490. Split avro Wake edges that span the entire wake — galbramc / detail
  491. Trying to split segments on wakes, but I need help... — galbramc / detail
  492. Fail depends tests if files are generated — galbramc / detail
  493. Reworking MOESS to use Field_CG — galbramc / detail
  494. revert away from Philip's local split — arthuang / detail
  495. update error estimate unit test — arthuang / detail
  496. unused variable — arthuang / detail
  497. added gravity to 2D two phase case — ericdow / detail
  498. New parameters for new EPIC 10.3 executable — galbramc / detail
  499. More reworking of MOESS — galbramc / detail
  500. More cleaning of MOESS — galbramc / detail
  501. Fix ccache path for SANS_Depend tests — galbramc / detail
  502. Another script fix for depends — galbramc / detail
  503. catch invalid split for high-order — pcaplan / detail
  504. Lots more work towards refactored MOESS — galbramc / detail
  505. More work on MOESS — galbramc / detail
  506. updated ADST cases. — cfrontin / detail
  507. MOESS refactoring to use fields seems to be done. — galbramc / detail
  508. Fixed includes — galbramc / detail
  509. Fixed parallel print statement — galbramc / detail
  510. SANS optimizer was using wrong initial step matric. — galbramc / detail
  511. Fixed bug in edge length deviation — galbramc / detail
  512. Minor fixes — galbramc / detail
  513. More ping tests — galbramc / detail
  514. Split up ProjectGlobalField — galbramc / detail
  515. Asymmetric cost schedule — galbramc / detail
  516. CMake updates — galbramc / detail
  517. continued working on debugging two phase gravity fluxes — ericdow / detail
  518. TAO implied metric calculation works in parallel — galbramc / detail
  519. Fix typo — galbramc / detail
  520. Remove mesh_0.json from tests with avro — galbramc / detail
  521. More work towards parallel MOESS with TAO — galbramc / detail
  522. Some compile fixes — galbramc / detail
  523. Synchronize error models in ghost/zombie cells — galbramc / detail
  524. Parallel MOESS is very close — galbramc / detail
  525. Link error fixes — galbramc / detail
  526. Some small fixes — galbramc / detail
  527. working out RANS stabilization terms — arthuang / detail
  528. pre merge — hcarson / detail
  529. Stole MMA from NLopt to parallelize with TAO. — galbramc / detail
  530. Added paralel serial equivalence test for MOESS TAO-MMA — galbramc / detail
  531. If I TAO+MMA does not wory, try MMA+MPI — galbramc / detail
  532. oliver test is running, not getting right rates yet — arthuang / detail
  533. Added artificial viscosity to tilted reservoir test case — savithru / detail
  534. version used in the git bisect — hcarson / detail
  535. refactored stabilized CG — arthuang / detail
  536. more robust quadrature tests, shouldn't have issues with quadrature caching. — cfrontin / detail
  537. push to laptop in the middle of updating RANSSA — arthuang / detail
  538. missing term for adjoint in RANSSA.. needs unit testing — arthuang / detail
  539. rans sourcegradientjacobiangradient thoroughly unit tested — arthuang / detail
  540. Added pressure integral output for two-phase. Modified tilted reservoir test-case. — savithru / detail
  541. Parallel MMA algorithm! — galbramc / detail
  542. Forgot the unit test — galbramc / detail
  543. and the actual files — galbramc / detail
  544. more forgotten files — galbramc / detail
  545. Some vera fixes — galbramc / detail
  546. took out demote surreal — arthuang / detail
  547. unit tests updated for stabilized integrand — arthuang / detail
  548. changes to error model to use order scaling in the regularization — hcarson / detail
  549. A number of fixes for parallel MOESS — galbramc / detail
  550. copyright notice fix — hcarson / detail
  551. fixing a function that got mangled somehow/sometime — hcarson / detail
  552. license error — hcarson / detail
  553. Updated ErrorModel_Element unit test — galbramc / detail
  554. Fixed warning and relaxed tolerance — galbramc / detail
  555. More minor fixes — galbramc / detail
  556. Added another derivative of St option — galbramc / detail
  557. Really really relaxed tolerance for Parallel/Serial equivalence for TAO with Intel... not sure whats up with that... — galbramc / detail
  558. updates to strongform integrand — arthuang / detail
  559. added needed hooks to 3D for stabilized CG — arthuang / detail
  560. Updated unit tests and whatno — blsc / detail
  561. Nightly fixes — galbramc / detail
  562. Trying to improve the speed of XField_Lagrange — galbramc / detail
  563. add RANS ndconvert omterface — arthuang / detail
  564. fixed up RANS asymptotic — arthuang / detail
  565. added trace on scalar, bug in new source fcn in 3d — arthuang / detail
  566. fixed unit test, mod source — arthuang / detail
  567. new adjoint analytic function for 1D BL — arthuang / detail
  568. added needed hooks for AV, implementation will be needed — arthuang / detail
  569. getting unit tests to pass — arthuang / detail
  570. working on RANS... — arthuang / detail
  571. relax tol on unit test — arthuang / detail
  572. truly linear adjoint — arthuang / detail
  573. caught some bugs, put in unit tests — arthuang / detail
  574. pre merge — hcarson / detail
  575. Quadrature fix on AD3DST. — cfrontin / detail
  576. AD4DST refactor. — cfrontin / detail
  577. orthodoxy is unconsciousness. — cfrontin / detail
  578. quadrature fixes — cfrontin / detail
  579. New unit tests and other updates — blsc / detail
  580. Moving stuff to hypersonic — blsc / detail
  581. More to hypersonic — blsc / detail
  582. AD4D update. — cfrontin / detail
  583. Fixed some analyzer warnings — galbramc / detail
  584. One more analyzer suppression — galbramc / detail
  585. Some MPI cleanup — galbramc / detail
  586. target dof factor — pcaplan / detail
  587. always forget to switch local split — pcaplan / detail
  588. horizontal tab — pcaplan / detail
  589. wake tests were originally off — pcaplan / detail
  590. Finalized moving nDOFpossessed to Field — galbramc / detail
  591. Added missing include — galbramc / detail
  592. settings for Marshall to run — hcarson / detail
  593. Fixed a bug in PTC residual indexing — shunz / detail
  594. Add debug information for MassMatrix singular matrix errors — galbramc / detail
  595. fixes to mesh adapt — hcarson / detail
  596. Missing include — galbramc / detail
  597. Enabled daisy chain in algebraic equation set class for PTC.  Refactored (and hopefully clarified) calculation of pseudo-transient contributions to residuals and jacobians — shunz / detail
  598. Fixed a bug in PTC AES's cell group integration calls, and a bug in residualPseudoTemporal daisy-chain call — shunz / detail
  599. Enabled PTC for coupled IBL of 4x4 block system — shunz / detail
  600. Updated unit test — shunz / detail
  601. CG RANS is looking more promising... — arthuang / detail
  602. loops in rans joukowski — arthuang / detail
  603. One more missing include — galbramc / detail
  604. fixes for jenkins — hcarson / detail
  605. fixed excessively small initial case... now starting from predicted uniform box size. — cfrontin / detail
  606. Added solve4d smart dof case. — cfrontin / detail
  607. added hooks for BICGStab — arthuang / detail
  608. Speed improvements for UniqueElem and XField_Lagrange — galbramc / detail
  609. Purged matrix manipulation Nishida hack — galbramc / detail
  610. fixed test to match ErrorModel_Elemental.h — hcarson / detail
  611. One move too many — galbramc / detail
  612. playing around with stabilization — arthuang / detail
  613. RANS with scaling — arthuang / detail
  614. Fix for jenkins parallel make — galbramc / detail
  615. Updates to porous media PDEs: added gravity to 2D two-phase, added pressure output functional — savithru / detail
  616. Vera fixes — savithru / detail
  617. Fixed copyright notice — savithru / detail
  618. One more fix.. — savithru / detail
  619. Fix uninitialized value — savithru / detail
  620. Some cleanup in PTC — shunz / detail
  621. Fixed a bug in PTC daisy chain implementation: previously, past solution and time step field was not properly updated for daisy-chained equations — shunz / detail
  622. reapply quadorder fix. — cfrontin / detail
  623. Fix for singular matrix detection. Only guard against 1/0. — galbramc / detail
  624. modified some scalar functions — pcaplan / detail
  625. Separating out LAPACK from LAPACKE — galbramc / detail
  626. Fixes for LAPACK interface — galbramc / detail
  627. Forgot to switch back a change — galbramc / detail
  628. Only test with LAPACKE on reynolds — galbramc / detail
  629. Don't show LAPACKE as an option on OSX — galbramc / detail
  630. Minor fix — galbramc / detail
  631. Include MKL in coverge testing — galbramc / detail
  632. Source intel for coverage — galbramc / detail
  633. Fixes for checking LAPACK — galbramc / detail
  634. Automatic checking of all lapack functions used by SANS — galbramc / detail
  635. Some small fixes — galbramc / detail
  636. Relax tolerance a bit more for intel — galbramc / detail
  637. Added maximum rate matrix output — galbramc / detail
  638. updated i/o on 4d cases. — cfrontin / detail
  639. New files for Adjoint consistent potential — galbramc / detail
  640. Cleanup trace matrix print — galbramc / detail
  641. Forgot a file — galbramc / detail
  642. working on RANS — arthuang / detail
  643. Fixes for latest refine — galbramc / detail
  644. agls formulation looks better? — arthuang / detail
  645. modified RANS tests — arthuang / detail
  646. pre merge — hcarson / detail
  647. typo denomerator to denominator — hcarson / detail
  648. caught an indexing bug with interior trace groups — hcarson / detail
  649. some tweaks as was retesting using elemental estimates. They still don't work (phew....) — hcarson / detail
  650. changed the Galerkin DoubleBL case to match up with the DG one — hcarson / detail
  651. changed checkGrid() to assert(assertGrid()). This is the same as checkGrid() in debug mode, but gets removed in release — hcarson / detail
  652. bug fixes and clean up — hcarson / detail
  653. undoing the assertGrid, it doesn't work how I thought it did — hcarson / detail
  654. updated io on 2D+T cases. — cfrontin / detail
  655. fixed solve4d i/o — cfrontin / detail
  656. fixes to make the avro grids work in the adapt — hcarson / detail
  657. fixed h approximation, *philip's tableflip emoticon*. — cfrontin / detail
  658. oops. — cfrontin / detail
  659. hooks for modifying order and power and command line — hcarson / detail
  660. fixed dumbass error. — cfrontin / detail
  661. Minor fixes per intel guide. Fix avro+wake. — galbramc / detail
  662. still working on RANS... — arthuang / detail
  663. Some fixes for BLAS and turn off one Wake test — galbramc / detail
  664. adding new parmafield builders — arthuang / detail
  665. Forgot file dump — galbramc / detail
  666. Updated EPIC interface — galbramc / detail
  667. distance function gradient working — arthuang / detail
  668. hack for sourcegradient compiles — arthuang / detail
  669. unitialized warnings from jenkins — hcarson / detail
  670. tweak for hypersonic — hcarson / detail
  671. found a bug in RANS source gradients — arthuang / detail
  672. this one not that one — arthuang / detail
  673. deprecated ElementDual local patch. Everyone can use Element now, and it should throw an exception if you run with ElementDual — hcarson / detail
  674. added the spaceType to the dummy problems — hcarson / detail
  675. sigh. forgot they need override — hcarson / detail
  676. maaaaaan — hcarson / detail
  677. sigh — hcarson / detail
  678. Fix for PETSc 3.11 — galbramc / detail
  679. moved the all_reduce inside the #define of Boundary Outputs. The FunctionalCell_Galerkin already includes an all_reduce — hcarson / detail
  680. Setup for Mike Park to test metric calculations — galbramc / detail
  681. commiting the new error model and the two double boundary layer cases to run on hypersonic — hcarson / detail
  682. Fix nightly clang warning — galbramc / detail
  683. typos and a small test for the DOF Map, didn't catch anything... — hcarson / detail
  684. playing with formulations, added source to BC — arthuang / detail
  685. getting closer — arthuang / detail
  686. SA wake test case — arthuang / detail
  687. minor edits to rans, unit tests — arthuang / detail
  688. better singular perturbation boundary layer case — pcaplan / detail
  689. i think the stabilization is sound... — arthuang / detail
  690. hugh's suggestion for a dimension-independent error model — pcaplan / detail
  691. Added case to adaptND_mesh_optimizer_toy to easily generate unstructured uniform grids. — cfrontin / detail
  692. SolveND_DGBR2_AD_ST_toy for 3D and 4D now have grid loading capability, but it's ifdeffed out for now. — cfrontin / detail
  693. fixed #define — cfrontin / detail
  694. start from DG grids — arthuang / detail
  695. more tinkering with RANS — arthuang / detail
  696. Some updates for a few things I' — blsc / detail
  697. nitsche param now includes source term — arthuang / detail
  698. Added 2D+T CG unstabilized advection diffusion mechanics. — cfrontin / detail
  699. added an integrand for estimating the square of the L2 error locally — hcarson / detail
  700. locked the TopoDim template to the Topology::TopoDim template. We should not be templating on both here, these should be removed — hcarson / detail
  701. added some integral tests — hcarson / detail
  702. A class for computing L2 error estimates, either nodally or elementally — hcarson / detail
  703. Reduced ErrorOrder_4D_DG_Pentatope_btest max grid size to reduce runtime — galbramc / detail
  704. Fixed uninitialized data with intel — galbramc / detail
  705. removed TopoDim from the for_each_XXX functions. Also added Topology::CellTopoDim, which gives the dimension of the topology for which Topology was a trace. — hcarson / detail
  706. Also made a GalerkinLib in the process of splitting out the local solve machinery for CG to use in the L2 proction solver — hcarson / detail
  707. fixing up unit tests to match new indicator calculation. Also changing mitState Nitsche to use the p independent lengthL. Will then need to choose constants properly some other way. — hcarson / detail
  708. A Nodal error estimate order test — hcarson / detail
  709. refactor into explicit instantiations and added GalerkinLib to a CMakeLists.txt I forgot — hcarson / detail
  710. more instantiations and fix a bug — hcarson / detail
  711. moving towards a CG L2 local projection. — hcarson / detail
  712. updating error estimate order tests. DG now uses the mitState BC, the CG one does not as it can't achieve the rates. There must be an instability in the adjoint.... — hcarson / detail
  713. Use CG local patch bcs for the local solve — hcarson / detail
  714. actually added the declaration to the header... — hcarson / detail
  715. Added a re-roll of the c++-14 make_unique feature — hcarson / detail
  716. Added a re-roll of the c++-14 make_unique feature — hcarson / detail
  717. first use of make_unique. — hcarson / detail
  718. ErrorEstimateL2 should now handle p0 or p1 estimation gracefully, and also actually handled that stupid merge conflict — hcarson / detail
  719. Fixed many clang analyzer complaints — galbramc / detail
  720. new MDG directory — arthuang / detail
  721. MDG integrand cell unit test passing — arthuang / detail
  722. changed name of test and added the notebook that generated the L2 error integrand tests — hcarson / detail
  723. forgot an mpi include — hcarson / detail
  724. all_reduce only works on POD not the KahanSum — hcarson / detail
  725. some tweaks — hcarson / detail
  726. interior trace w/ 1d unit test — arthuang / detail
  727. missed a bracket in the merge — arthuang / detail
  728. unit test to ensure boundary coordinates of 4d meshes are correct since these are frequently used in sandbox tests...and they are correct... — pcaplan / detail
  729. jacobian ping test added for cell,trace — arthuang / detail
  730. forgot to turn CG LG trace back on — hcarson / detail
  731. added CG sandbox for AD 2D+T problem. — cfrontin / detail
  732. Fixed more analyzer warningw — galbramc / detail
  733. fixed for push, incorporated hugh's mistakenly included preprocessor define. — cfrontin / detail
  734. more hugh fixes plus trueoutput fixes. — cfrontin / detail
  735. SolverInterfaceL2 project actually uses the correct local patch for CG now — hcarson / detail
  736. JEEEEENNNNKIONNNNSSSSS — cfrontin / detail
  737. added SA nitsche — arthuang / detail
  738. jacobian and residual unit tests passing — arthuang / detail
  739. Fixed typo — galbramc / detail
  740. jenkins punched me in the face *again*. — cfrontin / detail
  741. MDG solve works.. needs debugging — arthuang / detail
  742. grumble — cfrontin / detail
  743. VOLUME_WEIGHTED crept through on those last commits. It shouldn't have and this fixes that — hcarson / detail
  744. why oh why did i not save the fixes last time — cfrontin / detail
  745. preprocessor sandbox troubles. — cfrontin / detail
  746. dumb preprocessor stuff fix. — cfrontin / detail
  747. bad include habits fixed. — cfrontin / detail
  748. MDG solves! optimal rates! — arthuang / detail
  749. warning fix. — cfrontin / detail
  750. moved some includes into the cpps — hcarson / detail
  751. removed PrimalNeighbors and added in Vertex — hcarson / detail
  752. Created Vertex Local grid. Have the four cpp, but only Area is actually declared, others would have link errors. Also a super basic unsplit test — hcarson / detail
  753. getting closer to everything compiling — arthuang / detail
  754. moved jacobian calculations into output integrands for Galerkin. bunch of stuff still not working — arthuang / detail
  755. getting closer to passing unit tests.. — arthuang / detail
  756. unit tests updated — arthuang / detail
  757. unit test/compile fixes — arthuang / detail
  758. indentation warning — arthuang / detail
  759. last final last warning bother. — cfrontin / detail
  760. tidying solve3d_CG_AD_ST_toy — cfrontin / detail
  761. Added vertexMode to Local patch, and edgeMap constructor to LocalBase — hcarson / detail
  762. removed the vertex local specialist patch. It might eventually be faster, but the development time would be much much slower — hcarson / detail
  763. MDG jacobianfunctional in place, solves are compiling — arthuang / detail
  764. 3D+T pde stuff should be good to go. — cfrontin / detail
  765. made the central vertex always dof 0. Also added flag for whether patch comes from splitting an edge attached to the vertex — hcarson / detail
  766. MDG compiles fine but doesn't stabilize in advective limit. Hmm... — arthuang / detail
  767. forgot to include a PrimalNeighbors rename — hcarson / detail
  768. MDG working well again.. we have to figure out the Nitsche BCs — arthuang / detail
  769. Some of the updates from hypersonic before merging — blsc / detail
  770. change cb back to 2 to pass Jenkins — arthuang / detail
  771. 2D error order compiling — arthuang / detail
  772. add function hooks to 3DST — arthuang / detail
  773. added function hooks for 1d, 2d spacetime — arthuang / detail
  774. fieldweighted cell integrand for MDG — arthuang / detail
  775. Fix some issues that came up during debug build — blsc / detail
  776. added fieldweighted for MDG trace integrand — arthuang / detail
  777. More clang analyzer warning fixes. — galbramc / detail
  778. more needed function hooks — arthuang / detail
  779. change to isothermal wall BCs, push to hypersonic — arthuang / detail
  780. ughhhhhh more ndconvert troubles — arthuang / detail
  781. add isothermal to RANs BCs — arthuang / detail
  782. working towards the nodal model. Moving to laptop — hcarson / detail
  783. working towards local indicator — hcarson / detail
  784. added the Simplex meta class — hcarson / detail
  785. moving to lab box — hcarson / detail
  786. removed unused typedef — arthuang / detail
  787. Nightly fixes — galbramc / detail
  788. fixed mdg unit tests — arthuang / detail
  789. Propogating changed from develop — blsc / detail
  790. Nightly fixes — galbramc / detail
  791. reordered MDG jac, added error estimate cell — arthuang / detail
  792. merge conflict — hcarson / detail
  793. RANS cases working pretty well, pushing to hypersonic — arthuang / detail
  794. mdg error estimates in place — arthuang / detail
  795. took out adjointState functions (mostly) — arthuang / detail
  796. completed sourceJacobianHACK change. MDG adjoints not quite working... — arthuang / detail
  797. Think I've got all the updates from hypersonic — blsc / detail
  798. 4d cg fields starting up... — cfrontin / detail
  799. error estimate unit test passing, but sandbox case is off... — arthuang / detail
  800. mdg error estimates working! — arthuang / detail
  801. typo — arthuang / detail
  802. cleanup — arthuang / detail
  803. moved into the SANS namespace — hcarson / detail
  804. removed Topology template, used Simplex<TopoDim> instead — hcarson / detail
  805. fixed hack interface — arthuang / detail
  806. added sub-cell step matrix accessor with 1D and 2D unit tests — hcarson / detail
  807. added unit testing for 3D RANS fncs, other cleanup — arthuang / detail
  808. forgot a file — arthuang / detail
  809. sandbox edits — arthuang / detail
  810. complaining about includes? — arthuang / detail
  811. unused variables.. push to tucano for memcheck — arthuang / detail
  812. unit test name change — arthuang / detail
  813. missing definition — arthuang / detail
  814. trying to fix segfault — arthuang / detail
  815. fixed the warning, but there's a segfault somewhere in edgelocal3d... — arthuang / detail
  816. wow that was really dumb but took 4 hours to find — arthuang / detail
  817. putting Nitsche into stabilization object.. stil lin process — arthuang / detail
  818. premerge — arthuang / detail
  819. most things compiling... — arthuang / detail
  820. added affine invariant implied metric calculation — hcarson / detail
  821. nitsche parameter change complete.. things seem to compile ok — arthuang / detail
  822. member variables out of order — arthuang / detail
  823. Added unit tests for gravity term in PDETwoPhase2D + some cleanup — savithru / detail
  824. tweaks to get MDG working for systems — arthuang / detail
  825. fixed checks for parallel — arthuang / detail
  826. whoops switched back — arthuang / detail
  827. hopefully more correct for parallel? — arthuang / detail
  828. Nightly fixes — galbramc / detail
  829. Another nightly fix — galbramc / detail
  830. More nightly fixes — galbramc / detail
  831. Another nightly fix — galbramc / detail
  832. big refactor of the edge solve. Removed the cell group business, and now builds nodal models from the data of the edge solves. No testing quite yet, but it compiles! — hcarson / detail
  833. on the way to 4d-ification of CG... — cfrontin / detail
  834. Hopefully last warning fix — galbramc / detail
  835. more of the same... — cfrontin / detail
  836. minor edits that shouldn't affect anything — arthuang / detail
  837. Merge conflict resolution and formatting issues — blsc / detail
  838. added a cell->node map to the nodalview. Also fixed a bug with edge local not correctly identifying that a node can be common to both vertices without sharing a cell with the edge. Basically a real niche case — hcarson / detail
  839. added hashing function for GroupElemIndex. Uses boost::hash. Can now use unordered_set and unordered_map on GroupElemIndex. Should be faster in those cases where we don't need orderedness, only unique — hcarson / detail
  840. tiny tweaks. uses linspace — hcarson / detail
  841. tweaks to the affInv implied metric option. Also forgot to add the #if for reference step calc — hcarson / detail
  842. added some commented code for inspecting eigenvalues for a 2x2 system. Useful for debugging — hcarson / detail
  843. MDG with discontinuous efld.. does better! — arthuang / detail
  844. working towards error estimate from fine scale — arthuang / detail
  845. minor change to AGLS — arthuang / detail
  846. missed a function update — arthuang / detail
  847. push to hypersonic — arthuang / detail
  848. push to hypersonic — arthuang / detail
  849. few changes to MDG output — arthuang / detail
  850. mdg rans sandbox compiling — arthuang / detail
  851. extra args for output — arthuang / detail
  852. print resid bug fix — arthuang / detail
  853. MDG qp should initialize to zero — arthuang / detail
  854. Commented out some stuff (with developer exceptions), will have to go back to that code — blsc / detail
  855. Updated tolerances — blsc / detail
  856. Removed unused variables — blsc / detail
  857. add nitsche to mdg traces — arthuang / detail
  858. towards p= 1+ 3D+T AD... — cfrontin / detail
  859. update mdg solutiondata constructor — arthuang / detail
  860. experimenting w upwind bcs — arthuang / detail
  861. compiling — arthuang / detail
  862. moving to hypersonic — hcarson / detail
  863. Formatting fixes — blsc / detail
  864. experimenting with distance fcn gradients again — arthuang / detail
  865. fixing some bugs and moving to hypersonic — hcarson / detail
  866. another flag to turn off the metric dumping — hcarson / detail
  867. More vera warnings — blsc / detail
  868. separated Nitsche order and stabilization order — arthuang / detail
  869. Fixed unit test bug — blsc / detail
  870. changed FrobNormSq formula for MatrixSymS to exploit the symmetry — hcarson / detail
  871. added an inner product for VectorS. Can also handle a range of weighted inner products, with MatrixS, MatrixSymS and a diagonal — hcarson / detail
  872. added some instantiations, also started using the InnerProduct function directly — hcarson / detail
  873. dgbr2 joukowski w solver interfaces — arthuang / detail
  874. added some 3D+T CG stuff ... work in progress... added 1D+T AD for learning syntax, added a lot of comments. — cfrontin / detail
  875. changed to 1 pt quadrature implied metric calculation. — hcarson / detail
  876. added mean, min, max quality calculator and output in the NLOPT output — hcarson / detail
  877. linked the use of the modified model to the use of the SANS optimizer. No longer compile time flag — hcarson / detail
  878. removed VOLUME_WEIGHTED and added FULL_NODAL. This compile time flag needs to be set to run in the nodal view of the world. Long term this will be the way to go, but it only works in serial presently, so leaving it disabled by default — hcarson / detail
  879. forgot to fix the mpi bit — hcarson / detail
  880. apparently boost::mpi needs its own special minimum and maximum functions... — hcarson / detail
  881. shortened the file by removing unneeded commenting and dead space — hcarson / detail
  882. missing 4d instantiation and an attempt at removing the compiler error. At least I compiled gnu5 and couldn't recreate it... — hcarson / detail
  883. maybe this works? — hcarson / detail
  884. forgot that we can't actually dump 4d grids... — hcarson / detail
  885. changed the exception to a warning — hcarson / detail
  886. forgot to rename them edge tests — hcarson / detail
  887. sigh — hcarson / detail
  888. manually return group and elem to make intel happy. Also reduced the number of shuffles to 3 in the implied test — hcarson / detail
  889. changed the tolerances a little, should now be able to do more shuffles — hcarson / detail
  890. changed the initial condition for the optimization to Log Euclidean. Had a case where affine invariant failed the non-linear solve, so lets just skip that — hcarson / detail
  891. Increasing coverage — blsc / detail
  892. only doing 1 shuffle in 3D because the bloody coverage takes too long — hcarson / detail
  893. I swear... — hcarson / detail
  894. using the max in the implied calculation. The optimization is so much easier/faster — hcarson / detail
  895. added a 3d corner singularity and also made the 3D L2 adapt flag based — hcarson / detail
  896. tweaks to try speed this damn thing up and get it through jenkins — hcarson / detail
  897. correct beta val — hcarson / detail
  898. added more iterations to the AffInv calc, and use the FrobNorm from DLA — hcarson / detail
  899. save the last mesh, explicitly 2D folder, and Affine Invariant metric calculation — hcarson / detail
  900. added the objective of maximizing average quality, this is also not a good one, but unsure what to do... — hcarson / detail
  901. changed the range for the loops, so that the lower dof counts can be run serial — hcarson / detail
  902. More coverage — blsc / detail
  903. Nightly fixes — blsc / detail
  904. changed AffInv to throw exception and revert to Log Euclidean. Also raised the tolerance slightly, as the tolerance is done the norm. Thus sqrt(eps) = 1e-8, so setting tol to 1e-7 — hcarson / detail
  905. fixed betas. reset dump Metric to every iteration. changed 3D to dump the final qfld with the same filename — hcarson / detail
  906. use the max det met — hcarson / detail
  907. Cleaned up well models, modified fixed outflow rate well to use a distributed source term, added a new output function for computing bottom-hole pressure of fixed rate wells — savithru / detail
  908. temp patch for 4D grid io — cfrontin / detail
  909. switch to sine^4 exact solution for solve4d cases. — cfrontin / detail
  910. added outerproduct for VectorS — hcarson / detail
  911. Hopefully faster 3D eigen solves — galbramc / detail
  912. Forgot unit tests — galbramc / detail
  913. Added an enum class for adding quality to the implied metric objective, can do maximize or minimize inverse. Also InverseLengthTensor for calculating the metric. Also fixed up the AffineInvariant calculation to use the correct Gradient descent algorithm from Pennec, thus it actually works now. — hcarson / detail
  914. tweaks for cases — hcarson / detail
  915. much reduced the tolerance for the affine invariant calculation. The non-linear optimization is really not that bad, and it is the most theoretically justifiable metric, so we should use it — hcarson / detail
  916. some typo fixes, some documentary additions, some work on 4d CG field structures. CG not working yet for 4D w/ order > 1. needs some DEVEL EXCEPTIONS before push. — cfrontin / detail
  917. hypersonic changes — pcaplan / detail
  918. Added the correct output functional for computing the bottom-hole pressure of a fixed-rate well — savithru / detail
  919. a forgotten rename — hcarson / detail
  920. Fix for new 3D eigen value calculation — galbramc / detail
  921. Relaxed a tolerance — galbramc / detail
  922. debugging hell. — cfrontin / detail
  923. Fix intel leak. Better logic checking for refine. — galbramc / detail
  924. merge con — hcarson / detail
  925. moving to hype — hcarson / detail
  926. Updates to track CAD parameters with avro — galbramc / detail
  927. some comments. Also changed the affine invariant calculation to count the number of unconverged solves, record the maximum norm and also increased the tolerance — hcarson / detail
  928. moving branch — hcarson / detail
  929. stylish stylish jenkins — hcarson / detail
  930. Some fixes for avro. Show implied metric cost. — galbramc / detail
  931. changed the advection direction for the Triple BL. Was displaying low-rank structure (>p+1 convergence), suspect because of fluke with rotational symmetry — hcarson / detail
  932. actually using mpi properly hopefully. Also fixed the test for the affine invariant calc — hcarson / detail
  933. make the print to screen scientific so it's actually informative — hcarson / detail
  934. figured out xfield trace coordinates arent matching their element compadres. added unit tests, still not passing though. — cfrontin / detail
  935. Fixes for avro with full potential — galbramc / detail
  936. Fix typo and warning — galbramc / detail
  937. its an unsigned int not a Real you fool — hcarson / detail
  938. Fixes for CAD parameters with avro in parallel — galbramc / detail
  939. Fixed TraceToCellRefCoord_Pentatope. — cfrontin / detail
  940. 4d xfield trace coordinate ordering bug fixed and re-tested. back to working on cg construction. probably some nefarious stuff in 4d-land that needs to be exceptioned out, but currently only im in that region. — cfrontin / detail
  941. warning fix — cfrontin / detail
  942. remove debugging ifdef switch. — cfrontin / detail
  943. Updated Wake+avro tests with curvature — galbramc / detail
  944. Missed file dump — galbramc / detail
  945. still tryna pass jenkins. added avro switching. — cfrontin / detail
  946. add interfacest to Phil's localpatch to work with Hugh's — arthuang / detail
  947. ffs ifdef SANS_AVRO again — cfrontin / detail
  948. forgot to only report unconverged if actually unconverged — hcarson / detail
  949. fixed tracetocellrefcoord bug side-effects. everything truly broken should have developer exceptions too now. — cfrontin / detail
  950. fixed bug in volume output functional — arthuang / detail
  951. setting the values of beta to those espoused in the proof paper — hcarson / detail
  952. Changed the AD cases to use similar command line interface to the L2 cases. Changed the advection directions to not be aligned with diag. Changed the peclet numbers to be 25 for all cases (unitary advection magnitude), should give reasonable order convergence without wild dof counts. Also changed the exact output calculations to be symbolic, so we can change the advection and diffusion values without having to recalculate — hcarson / detail
  953. added x vs h and x vs AR dumping for the BL case. Doesn't really seem to show very much though, I think Masa was being cheeky — hcarson / detail
  954. making use DG element counts, should be quicker — hcarson / detail
  955. FULL_NODAL ON — hcarson / detail
  956. Unified and cleaned up output functionals for 2D two-phase. Added unit tests for BHP calculations. — savithru / detail
  957. Changed implied optimization from -Q to 1-Q. Fixes so full potential works with adaptation. — galbramc / detail
  958. Maybe fixed nightly warning — galbramc / detail
  959. Fixed build error — galbramc / detail
  960. Fixed warning — savithru / detail
  961. nightly fix — cfrontin / detail
  962. One more — savithru / detail
  963. A few more compile fixes — galbramc / detail
  964. vera fix 2.0 — cfrontin / detail
  965. VERA FFS A SEMICOLON?! — cfrontin / detail
  966. cleaning up some CG — arthuang / detail
  967. Put CostModel integration order back — galbramc / detail
  968. in the middle of getting CG w lifting operators — arthuang / detail
  969. forgot a file — arthuang / detail
  970. found the bug! — arthuang / detail
  971. CG w BR2 adapts up and running — arthuang / detail
  972. missing something... — arthuang / detail
  973. mod error order tests — arthuang / detail
  974. Added elementEdges function to get runtime edge maps — galbramc / detail
  975. Updates for new avro file layout — galbramc / detail
  976. deleting a defunct test — hcarson / detail
  977. deleting two defunct tests — hcarson / detail
  978. Fix for clang — galbramc / detail
  979. added edge split grids, uses a recursion for the time being. This can probably be avoided ultimately — hcarson / detail
  980. Added virtual function identifier isEdgeMode() and switched the logic for checking to that. Clearing the path to using Phil patch for edge solves — hcarson / detail
  981. Fixes for g++-9 — galbramc / detail
  982. Removed the avro instance — galbramc / detail
  983. Added an edge local constructor to LocalPatch. Tested a little bit. It works, and also, it appears to basically prove there was a bug in EdgeLocal — hcarson / detail
  984. Fix weekly clang compile error — galbramc / detail
  985. Fixed weekly memory leaks — galbramc / detail
  986. moving back towards MDG stuffs — arthuang / detail
  987. forgot a file — arthuang / detail
  988. copyright vera error — arthuang / detail
  989. got rid of whitespace — arthuang / detail
  990. making things consistent for Nitsche, MDG — arthuang / detail
  991. got rid of avro include — arthuang / detail
  992. missed a update on nitsche — arthuang / detail
  993. fixedu nit test — arthuang / detail
  994. update error order test — arthuang / detail
  995. Added ksabo@mit.edu to DeveloperEmailAddresses — ksabo / detail
  996. relax tol for intel — arthuang / detail
  997. made LocalPatch work with the Edge patch. Also set the defaults for Corner Singularity to the ones used by Masa — hcarson / detail
  998. tweaks and bits — hcarson / detail
  999. vera fix — pcaplan / detail
  1000. more vera fixes.. — pcaplan / detail
  1001. avro interface fixes.. — pcaplan / detail
  1002. curly braces... — pcaplan / detail
  1003. curly braces again... — pcaplan / detail
  1004. whitespace + tab — pcaplan / detail
  1005. more vera fixes................. — pcaplan / detail
  1006. ckf vera fixes — pcaplan / detail
  1007. merge of ckf test — pcaplan / detail
  1008. whether dummy or input mesh, result is the same — pcaplan / detail
  1009. updated tolerances for unit tests — ksabo / detail
  1010. explicit constructor for nightly — pcaplan / detail
  1011. More zombies for Edge local solves — galbramc / detail
  1012. Updated valgrind version — galbramc / detail
  1013. Fixed array out of bound — galbramc / detail
  1014. refine did nothing! — galbramc / detail
  1015. pre merge — hcarson / detail
  1016. jenkins fixes — hcarson / detail
  1017. forgot a change — hcarson / detail
  1018. stupid parenthesis — hcarson / detail
  1019. changes to test localpatch for edge — hcarson / detail
  1020. removing some more erroneous testing — hcarson / detail
  1021. removing even more erroneous testing — hcarson / detail
  1022. unused variables — hcarson / detail
  1023. Fixes for tracking parameter space with EGTessModel — galbramc / detail
  1024. Dissable one avro wake test — galbramc / detail

#241 (Jun 24, 2019, 6:18:16 PM)

  1. Reworked build of parmetis. refine uses parmetis. added avro build. — galbramc / detail
  2. minor edits to edge local unit tests — arthuang / detail
  3. Fixes for avro and refine — galbramc / detail
  4. Suppress warning — galbramc / detail
  5. Parallel Field4D test fixes. Give refine more time. — galbramc / detail
  6. Relaxed tolerance for intel — galbramc / detail
  7. Don't run ErrorOrder_4D in parallel — galbramc / detail
  8. Updated refine build — galbramc / detail
  9. Updated refine check — galbramc / detail
  10. Nightly build fixes... plus a stopgap ifdef until the SVDless 4D normal vector is done. — cfrontin / detail
  11. Reduce run time of 4D error order check — galbramc / detail
  12. Relaxed another tolerance — galbramc / detail
  13. trying out some edge stabilization — arthuang / detail
  14. MCMC things and got the temp sensors working — hcarson / detail
  15. Remove files written by avro — galbramc / detail
  16. Dissable refine testing for now — galbramc / detail
  17. Added memcheck to parmetis build — galbramc / detail
  18. Ignore external parmetis — galbramc / detail
  19. added hessian to interior trace — arthuang / detail
  20. edge stabilization working-ish? — arthuang / detail
  21. changing branch — hcarson / detail
  22. MC for running on hypersonic — hcarson / detail
  23. ready for running on hypersonic — hcarson / detail
  24. Generalized valgrind suppression — galbramc / detail
  25. moving to hypersonic again — hcarson / detail
  26. egads coords must have 3 dimensions even in 2d — pcaplan / detail
  27. the final files from the project — hcarson / detail
  28. forgot a function — hcarson / detail
  29. pushing to tucano — arthuang / detail
  30. Suppressed CMakeLists errors. [TBD] — shunz / detail
  31. Fixed panel metod tests — shunz / detail
  32. AFLR4 updates and some Jenkins scripts — galbramc / detail
  33. Link tetgen before avro — galbramc / detail
  34. instantation of elementlocal version of local splits for 4d...unit test will fail because the result is different than savi's convention — pcaplan / detail
  35. missing definitions for elementlocal & edgelocal — pcaplan / detail
  36. some instantiations of savi's method for doing local splits — pcaplan / detail
  37. xfield_lagrange method of doing local splits...still debugging...will fix later... — pcaplan / detail
  38. Refactoring.  Patched unit tests — shunz / detail
  39. More unit tests — shunz / detail
  40. added unit tests — shunz / detail
  41. Fixed unit tests — shunz / detail
  42. Fixed IBL unit tests — shunz / detail
  43. Added unit test.  Turned off unused methods. — shunz / detail
  44. Fixed a bug in CMakeLists: use of out-of-scope variable — shunz / detail
  45. Fixed a bug in cmake files that only appear when building with Xcode — shunz / detail
  46. Refactored ping test input array type.  Fixed IBL-related 4x4 block system ping tests.  Added missing MPI-related method definitions for pure virtural methods — shunz / detail
  47. Relocated code into SANS_MPI macros; otherwise, errors are raised about "member access to incomplete type" — shunz / detail
  48. Verified/fixed/cleaned IBL system tests with transition (full upwind). — shunz / detail
  49. Fixed duplicate naming of boost test suite — shunz / detail
  50. Relaxed pyrite tolerance — shunz / detail
  51. Updated forced-transition pyrite files after the bug fix in commit b30121ee5531d91e84aac94fbdab6462f458f4f8 — shunz / detail
  52. Turned off file dump — shunz / detail
  53. Fixed formatting — shunz / detail
  54. Fixed empty traling line — shunz / detail
  55. Fixed DG and HDG AES tests for uncoupled IBL — shunz / detail
  56. Fixed formatting — shunz / detail
  57. Reverted changes to (viscous) HDG stuff: those abandoned changes treated qfld and afld as a single bundle field — shunz / detail
  58. Update AlgebraicEquationSet_HDGAdvective_Advection_btest.cpp — shunz / detail
  59. Fixed one more test affected by ping test refactoring.  Fixed formatting and screen output — shunz / detail
  60. Fixed another system test affected by IBL Qauxv interpreter refactoring — shunz / detail
  61. Update ErrorOrder_1D_HDGAdvective_Advection_btest.cpp — shunz / detail
  62. Fixed warning and missing instantiation — shunz / detail
  63. Added an instantiation just for completeness, although it is no longer used — shunz / detail
  64. moving towards adjoint GLS — arthuang / detail
  65. Cleaned sandbox cases — shunz / detail
  66. relaxed tolerances for clang_release — shunz / detail
  67. Suppressed output — shunz / detail
  68. Fixed bugs in CMakeLists — shunz / detail
  69. Fixed HDG advection tests — shunz / detail
  70. Removed the pure advection test case using (viscous) HDG machinery — shunz / detail
  71. parallel outputs in galerkin solver interface, AGLS error estimation fixed? — arthuang / detail
  72. Refactored halving line search and fixed unit tests — shunz / detail
  73. Fixed memory errors — shunz / detail
  74. Relaxed tolerance for intel — shunz / detail
  75. relaxed tolerances for intel18 — shunz / detail
  76. Relaxed timeout limits — shunz / detail
  77. Speed up unit tests in response to Jenkins timeout — shunz / detail
  78. Fixed typo — shunz / detail
  79. Relaxed tolerance for gnu48 — shunz / detail
  80. Tried to fix timeout on Jenkins testing (coverage_clang reynolds) — shunz / detail
  81. Reverted CMakeLists to see if TIMEOUT is set properly this time on Jenkins — shunz / detail
  82. minor refactoring — shunz / detail
  83. Refactored CMakeLists for Xcode build — shunz / detail
  84. Refactored Newton solver — shunz / detail
  85. Minor fix — shunz / detail
  86. Fixed warnings — shunz / detail
  87. Added IBL max update fraction — shunz / detail
  88. Enabled under-relaxed Newton update for coupled 4x4 block system of IBL with free transition. — shunz / detail
  89. Refactor of avro XField interface — galbramc / detail
  90. Consistent logic for setting cmake testing timout property — galbramc / detail
  91. Fixed refine interface change — galbramc / detail
  92. Fix ifdef when not using avro — galbramc / detail
  93. More fixes to deal with avro — galbramc / detail
  94. Minor cleanup — galbramc / detail
  95. Added unit tests for IBL updateFraction — shunz / detail
  96. Upgrade PETSc — galbramc / detail
  97. More avro and PETSc tweaks — galbramc / detail
  98. I don't understand why dl library is needed to link a static library... — galbramc / detail
  99. Fix for refine check — galbramc / detail
  100. Suppress compiler warning when building PETSc — galbramc / detail
  101. Fix for avro with 4D — galbramc / detail
  102. Enable refine testing again — galbramc / detail
  103. Updated copyright date to 2019 — galbramc / detail
  104. Updated copyright date to 2019 — galbramc / detail
  105. dimension-independent local splits — pcaplan / detail
  106. timing tests show dim-independent implementation on par with savithru's impl...tried to debug hugh's local xfield in primal mode but something is wrong...unit tests on the way — pcaplan / detail
  107. adding stabilized error estimation infrastructure — arthuang / detail
  108. more playing with AGLS — arthuang / detail
  109. minor edits — arthuang / detail
  110. reconciling merge conflicts and some tweaks — hcarson / detail
  111. license updates — hcarson / detail
  112. fixes to match avro — hcarson / detail
  113. forgot to add the avro defined precompile check — hcarson / detail
  114. relaxed tolerances and forgot to split world — hcarson / detail
  115. tweaking tol again... — hcarson / detail
  116. another tweak... — hcarson / detail
  117. cleanup of localpatch + commenting — pcaplan / detail
  118. copyright — pcaplan / detail
  119. more copyright — pcaplan / detail
  120. Updates for MOESS optimizations. Still needs more work. — galbramc / detail
  121. Instantiations for 4D AD solve. — galbramc / detail
  122. A few fixes — galbramc / detail
  123. Compile fixes — galbramc / detail
  124. More instantiations for 4D — galbramc / detail
  125. removed anachronistic definition of primal grid. Primal grid now matches the behavior of the normal DG grids. Unit tests have just been turned off in the meantime — hcarson / detail
  126. make sure mpi is init'd before calling rank by actually running in parallel — pcaplan / detail
  127. revert back to dual — pcaplan / detail
  128. ifdef SANS_AVRO for tests with CKF triangulation — pcaplan / detail
  129. changed to Dual in the system test — hcarson / detail
  130. attempted to fix nightly tests — shunz / detail
  131. Relaxed timings, fixed warning — galbramc / detail
  132. Updated pyrite files to fix nightly tests — shunz / detail
  133. Moved timing test into sandbox — galbramc / detail
  134. Cleanup of refine interface with auto memory management. — galbramc / detail
  135. Modest progress on instantiations. — cfrontin / detail
  136. Fix include — galbramc / detail
  137. 4D box unit grid grandfathered out of XField_KuhnFreudenthal. — cfrontin / detail
  138. added fix to 3D — hcarson / detail
  139. removed the separate 4D file, just added an instantiate at the end of 3D — hcarson / detail
  140. p=7 led to error close to machine zero, which seemed to cause touble to nightly ErrorOrder test.  Cut back p from 7 to 6 — shunz / detail
  141. p=6 still too high for pyrite test for ErrorOrder — shunz / detail
  142. Attempted to warning "use of zero-allocated memory" — shunz / detail
  143. Some cleanup in the sandbox. Added 2D L2Project adaptation — galbramc / detail
  144. Added tecplot dump for metric fields. Other small fixes — galbramc / detail
  145. Changed floor to round for generating new 1D mesh — ursachi / detail
  146. Minor refactoring — shunz / detail
  147. Compile fixes and more dependency warning suppressions — galbramc / detail
  148. Add dl library for avro — galbramc / detail
  149. Replaced nt transport equation with G variable as in SciTech paper, although the results are equivalent — shunz / detail
  150. bits and pieces — hcarson / detail
  151. added linear args and a test — hcarson / detail
  152. just wanna get my stuff in the repo — pcaplan / detail
  153. Files for parallel periodic XField2D_Box_Triangle_Lagrange (Issues need to be fixed) — kug46 / detail
  154. retrieve edge indices and sub elems from split — pcaplan / detail
  155. ref coordinates on split sub cells — pcaplan / detail
  156. Added a layer of abstractions when evaluating fluxes, sources etc. in IBL pde class — shunz / detail
  157. Fixed formatting... previously went under the radar since vera++ was not installed locally... — shunz / detail
  158. inst of some 4d adaptation things — pcaplan / detail
  159. Added scalar and dot product fixes for MatrixSymS — galbramc / detail
  160. Working on 3d ST... — cfrontin / detail
  161. Enabled smooth laminar/turbulent blending — shunz / detail
  162. Fixed SVD calculation for normal vector for 4D tet. — cfrontin / detail
  163. Scrubbed some comments. — cfrontin / detail
  164. edits to gls error estimation — arthuang / detail
  165. unit tests for basis function ref elem split — pcaplan / detail
  166. 4d adapt? — pcaplan / detail
  167. Fixed intel errors by relaxing tolerance and reconciling a missing pyrite file specialized for intel MKL — shunz / detail
  168. added a Field weighted stabilized CG nodal estimate integrand test in 2D — hcarson / detail
  169. comment — hcarson / detail
  170. Continued work on ElementXField implementations. — cfrontin / detail
  171. Vera fixes, COPYRIGHT fixes, and some avro preprocessor fixes. — cfrontin / detail
  172. Updates for 2D L2 Projection sandbox test — galbramc / detail
  173. Updates for 1D L2 Projection sandbox test — galbramc / detail
  174. Clearing out high-level exceptions whose low-level implementations are done. — cfrontin / detail
  175. Added last bits of ADST4D case, should run (?) now. — cfrontin / detail
  176. Added new trace free step matrix error model. Not enabled. — galbramc / detail
  177. added a 2D error estimate test, and asserted assumption on basis function type — hcarson / detail
  178. Fix. — cfrontin / detail
  179. fixed the estimate vary tests — hcarson / detail
  180. notebook with Double BL exact solutions — hcarson / detail
  181. forgot the copyright change — hcarson / detail
  182. Normalize MOESS optimization with nlopt — galbramc / detail
  183. Fixed undefined reference — galbramc / detail
  184. Fixed a bug in laminar/turbulent blending function — shunz / detail
  185. ifdef SANS_AVRO requirements in unit tests. — cfrontin / detail
  186. removed the scp to devastator. Should be useful for everyone now — hcarson / detail
  187. forgot to change a quadratic function explicit constructor — hcarson / detail
  188. undoing a print — hcarson / detail
  189. EQUILATERAL PENTATOPE coordinates + added unit volume check in unit test to catch this — pcaplan / detail
  190. unit test for split ref step matrix on pentatopes + generating matlab script — pcaplan / detail
  191. unit tests for error model — pcaplan / detail
  192. 4D L2 ERROR ADAPTATION WORKS...cleaning up........ — pcaplan / detail
  193. Added new MOESS optimization without global FrobNorm — galbramc / detail
  194. Forgot CMake file — galbramc / detail
  195. CG artificial viscosity in 2D — blsc / detail
  196. Small fix for cmake summary — galbramc / detail
  197. Weekly test fixes — galbramc / detail
  198. Modified AlgEqSet, IntegrandInteriorTrace and 2D DGAdvective toy for Parallel 2D Periodic Grids — kug46 / detail
  199. Towards parallel PETSc/TAO — galbramc / detail
  200. Refactored intermittency calculation — shunz / detail
  201. Generailized Projection to Qauxi to handle blended intermittency. — shunz / detail
  202. Trying to bump coverage. — cfrontin / detail
  203. Some cleanup of logEuclidian cost — galbramc / detail
  204. Added lagrange P1 to the exception — hcarson / detail
  205. copywrite update for some files — arthuang / detail
  206. Various small fixes — galbramc / detail
  207. added a Tanh2 function based on Loseille's Tanh3 — hcarson / detail
  208. Updated Embedding unit test for quadrature integration — galbramc / detail
  209. Reverted to binary intermittency as default — shunz / detail
  210. Relaxed tolerance for intel compiler.  Restored default to binary intermittency for existing tests — shunz / detail
  211. Trying to get coverage... — cfrontin / detail
  212. Tests added + un-tested, unused additions removed. — cfrontin / detail
  213. Added comments and made sure ADST4D case is ready for parallelization. — cfrontin / detail
  214. More parallel fixes. — cfrontin / detail
  215. Relaxed torleranc for gnu48 — shunz / detail
  216. More parallel fixes. — cfrontin / detail
  217. Added regularized point source to accommodate potential co-existence of free and forced transition in the captured transition treatment — shunz / detail
  218. Updated ADST3D cases (solve and adapt) for avro and MPI use. — cfrontin / detail
  219. Forgot an MPI redefine. — cfrontin / detail
  220. jk MPI fix actually this time. — cfrontin / detail
  221. Minor fix — galbramc / detail
  222. Continued avro- and MPI-ification. — cfrontin / detail
  223. Unit testing fixes. — cfrontin / detail
  224. Fixed warning. — cfrontin / detail
  225. Fixed fstream initializer. — cfrontin / detail
  226. Warning cleanup... — cfrontin / detail
  227. Fixes towards parallel+periodic — galbramc / detail
  228. Coverage improvement... — cfrontin / detail
  229. cleanup of interface to match savithru's — pcaplan / detail
  230. instantiation of 4d savithru splits (technically the extraction works because that's what i started with but the actual split does not) — pcaplan / detail
  231. Fixes for running parallel DG with periodic BCs — galbramc / detail
  232. Removed adapt4d skeleton from build. — cfrontin / detail
  233. Added instantiation — galbramc / detail
  234. ffs — cfrontin / detail
  235. instantiate SVD (with error), XField_Local calls XField_LocalPatch in 4d which local_split_patch is turned off — pcaplan / detail
  236. ifdef sans avro in sandbox file — pcaplan / detail
  237. instantiation of new MOESS SANS optimizer for 4d — pcaplan / detail
  238. experimenting w p1 adjoint — arthuang / detail
  239. adapt3d change in api — pcaplan / detail
  240. relaxed tolerance for system test — pcaplan / detail
  241. publicize error model functions...still not sure why — pcaplan / detail
  242. added note about protected methods for error model class — pcaplan / detail
  243. missing operator for 1d function — pcaplan / detail
  244. unprotected from SANS_AVRO avro namespace use — pcaplan / detail
  245. rename file to avoid copyright check — pcaplan / detail
  246. deleted file — pcaplan / detail
  247. Only have vera look at .cpp and .h files — galbramc / detail
  248. SANS_CHECK_CLOSE not BOOST_CHECK_EQUAL for floats, come on philip — pcaplan / detail
  249. bug != in shock capturing — arthuang / detail
  250. revert back to formulation — arthuang / detail
  251. add expt stab (no-op) to 2DAD — arthuang / detail
  252. Added a C2 continuous smooth abs — hcarson / detail
  253. fix intel compiler warning — pcaplan / detail
  254. add pending changes in local patch header — pcaplan / detail
  255. Run SANS_Commit in parallel — galbramc / detail
  256. Cannot specify format for 'time' on all systems — galbramc / detail
  257. Updates to SANS_Commit.sh — galbramc / detail
  258. One more parallel fix — galbramc / detail
  259. Forgot to run 'make all' — galbramc / detail
  260. Fix make warning for now — galbramc / detail
  261. dev exceptioned code required only for 4d tecplot. — cfrontin / detail
  262. added a C2 smoothabs and matlab file that generated — hcarson / detail
  263. actually got the smoothmax1, smoothmax2 functions work, also added implicitly defined smoothmin1 and smoothmin2 — hcarson / detail
  264. merge fix — cfrontin / detail
  265. merge fix 2 — cfrontin / detail
  266. working on new error models — hcarson / detail
  267. ASExpCombo function for testing L2 — hcarson / detail
  268. Revive Adapt L2Project — galbramc / detail
  269. partial cleanup of local patch before supporting CG patches — pcaplan / detail
  270. Removed PBAM — galbramc / detail
  271. fix for jenkins, smoothmax2, tweaks to SANS opt and the VectorX hack to work with Phil — hcarson / detail
  272. unparallelized a test, there's a bug in P4 Hierarchical parallel — hcarson / detail
  273. turning the P3 and P4 unsplit tests off again. There's something weird and MPI-ish going wrong here — hcarson / detail
  274. Missed one include — galbramc / detail
  275. Missed one more file — galbramc / detail
  276. more cleanup of local patch — pcaplan / detail
  277. Suppress valgrind avro+intel strange warnings — galbramc / detail
  278. Broke up DGBR2lib trying to reduce compile time — galbramc / detail
  279. pre merge — hcarson / detail
  280. support for CG local solves with XField_LocalPatch — pcaplan / detail
  281. forgot to propagate changes in function names to tests — pcaplan / detail
  282. turnon off local patch splits for jenkins — pcaplan / detail
  283. silence warning — pcaplan / detail
  284. Switched implied metric optmizer to MMA — galbramc / detail
  285. agls tweaks — arthuang / detail
  286. Relaxed tolerance — galbramc / detail
  287. complete unit tests for xfield local patch...still need some work on CG tests — pcaplan / detail
  288. merge conflict — hcarson / detail
  289. a stupid bug — hcarson / detail
  290. changes to optimizers, and also turning the modified model back off — hcarson / detail
  291. Fix work weekly — galbramc / detail
  292. Weekly suppression and revived cotire — galbramc / detail
  293. Fixed the last error. — galbramc / detail
  294. Fixed a warning — galbramc / detail
  295. Added option to use CG field for PTC time step — galbramc / detail
  296. Changed the span of the SANS frob norm penalty function — galbramc / detail
  297. unit tests for DG/CG patches — pcaplan / detail
  298. remove print_inline — pcaplan / detail
  299. Conical method of stroud added, and working. Still needs integration into pentatope. — cfrontin / detail
  300. Added a ego map to EGTessModel that maps from All egos to Unique egos — galbramc / detail
  301. add xfield for full potential code using avro — pcaplan / detail
  302. Integrated Stroud into 4D quadrature. — cfrontin / detail
  303. cleanup avro wake3d — pcaplan / detail
  304. Fixed compile error — galbramc / detail
  305. Fixed another compile error — galbramc / detail
  306. work towards high-order support for local patch split — pcaplan / detail
  307. getting unit tests to pass... — arthuang / detail
  308. fixing merge conflicts — arthuang / detail
  309. Fix up PseudoTime_btest — galbramc / detail
  310. Fixed btest memory leak. — cfrontin / detail
  311. Improved stroud testing. — cfrontin / detail
  312. experimenting with an element based local solve — arthuang / detail
  313. BCNone is dead. Long live BCNone. — hcarson / detail
  314. New Implied Metric optimizer based on logM. Various other small fixes. — galbramc / detail
  315. elemID must be global — pcaplan / detail
  316. support for high-order local patch — pcaplan / detail
  317. ifdef avro — pcaplan / detail
  318. Updates for CG 3D Euler with shock capturing and 2D RANS — blsc / detail
  319. multiple def from copy paste — pcaplan / detail
  320. uninitializaed data fix (typo) — cfrontin / detail
  321. changes to error model interface for high-order local splits — pcaplan / detail
  322. Removing problematic instantiations due to wall distance parameter with artificial viscosity for RANS — blsc / detail
  323. add info as to which type of field is being sampled — pcaplan / detail
  324. Removing code from BCEuler3D_mitState.h which was ifdef'd out — blsc / detail
  325. added integer template for equation number — hcarson / detail
  326. typo in avro wake — pcaplan / detail
  327. specialized wake model not defined without avro — pcaplan / detail
  328. added an ND test of the BCNone with and without useFluxViscous — hcarson / detail
  329. Galerkin folder passes — hcarson / detail
  330. added the downcast to NoneBC to extract the boolean — hcarson / detail
  331. converted HDG over to the new Nones — hcarson / detail
  332. Updated implied metric for TAO. Fixed a number of floating point problems. — galbramc / detail
  333. More robust testing, compiler warning silencing. — cfrontin / detail
  334. dont inherit from xfield_avro if not defined — pcaplan / detail
  335. still missing some ifdef — pcaplan / detail
  336. Various compile fixes. Generalized Adapt2D_Mesh_Optimize for all mesh generators. — galbramc / detail
  337. Missed one — galbramc / detail
  338. Warning fixes — galbramc / detail
  339. killed a few more BCTypeNone references, just plugging away — hcarson / detail
  340. pre merge — hcarson / detail
  341. Removed the BCNoneUniField — hcarson / detail
  342. Added switching for expensive PI quadrature/low-cost NI quadrature. Fixed associated tests to get correct convergence rates. — cfrontin / detail
  343. committing sandbox pre-merge — arthuang / detail
  344. someone forgot to actually use the W and B typedefs — hcarson / detail
  345. missing include — hcarson / detail
  346. fixed the CMakeLists.txt — hcarson / detail
  347. made BCNone_AV to do with annoying ArtVisc feature — hcarson / detail
  348. missing includes and last bit — hcarson / detail
  349. fixed typo: derived to dervied — hcarson / detail
  350. vera slap correction — hcarson / detail
  351. Fixed one more BCNone — galbramc / detail
  352. forgot a file — hcarson / detail
  353. Removing more of the block artificial viscosity stuff in 2D and unit test updates — blsc / detail
  354. More merge conflicts — blsc / detail
  355. More merge conflict resolution — blsc / detail
  356. Fixed memory leak. — cfrontin / detail
  357. used quadrature cache for L2 projection — pcaplan / detail
  358. fix for order = 0 integration — pcaplan / detail
  359. New cost target for SANS MOESS optimizer. Lots of work towards avro+Wakes. — galbramc / detail
  360. Fixed typo — galbramc / detail
  361. Minor fixes — galbramc / detail
  362. One more typo — galbramc / detail
  363. Unit test updates — blsc / detail
  364. Helps to use consistent array size — galbramc / detail
  365. Updates to jenkins scripts — galbramc / detail
  366. Segregating MeshAdapter — galbramc / detail
  367. Missing instantiation — blsc / detail
  368. Fixed mistake in BuildAVRO — galbramc / detail
  369. Fixes for 3D CG case with artificial viscosity — blsc / detail
  370. Fixed compile issues related to separating dimensions — galbramc / detail
  371. Initializing variables to fix some compiler warnings — blsc / detail
  372. LU factorization on processors so PETSc solves reliably — blsc / detail
  373. Missed a few — galbramc / detail
  374. IRS updates — blsc / detail
  375. Fix for gnu 4.8 — galbramc / detail
  376. Refactored tecplot output to reduce link time — galbramc / detail
  377. Forgot files — galbramc / detail
  378. Fixed muliple instantiations — galbramc / detail
  379. pre merge — pcaplan / detail
  380. Syncing with hypersonic — blsc / detail
  381. reverting a dead end — arthuang / detail
  382. Adapt4D de-mothballing. — cfrontin / detail
  383. Fixed 'potential' memory leak problem by putting frees in same scope as creation. — cfrontin / detail
  384. Suppress cppcheck bug — galbramc / detail
  385. tweaked AGLS setup, hope this one gets through!! — arthuang / detail
  386. AGLS formulation w/ correction getting good rates! push to laptop, need to fix unit tests — arthuang / detail
  387. unit tests should be working... — arthuang / detail
  388. pre merge — hcarson / detail
  389. Another cppcheck suppression — galbramc / detail
  390. clean up on choosing reSolve groups — hcarson / detail
  391. some clean up — hcarson / detail
  392. added a virtual method for computing Initial Error. The default version has the overhead of a solve associated, whereas the SolverInterface version has the cheaper version that avoids the solve and thus is more robust — hcarson / detail
  393. parameter for avro to allow for interior boundaries needed for wake models — pcaplan / detail
  394. unit tests ready to go — arthuang / detail
  395. Adding 4D Legendre basis for Adapt4D + error estimates. — cfrontin / detail
  396. cmake addition of 4d legendre... still not finished though. — cfrontin / detail
  397. oops — cfrontin / detail
  398. don't use Philip's split for now — arthuang / detail
  399. add nb for output correction — arthuang / detail
  400. got rid of a unnecessary sandbox, updated other test — arthuang / detail
  401. One less call to checkGrid for curved LocalPatch — galbramc / detail
  402. More IRS stuff — blsc / detail
  403. moved metric conformity to separate file — pcaplan / detail
  404. tried to assess metric conformity and re-adjust target cost but simpler to just ask the mesher and have inner loop on adaptations to control target cost — pcaplan / detail
  405. pushing to hypersonic — arthuang / detail
  406. some fixes to actually use the volume factor... — pcaplan / detail
  407. new elemental error estimate for CG, not especially tested but seems to be ok — hcarson / detail
  408. more tweaks to cases — hcarson / detail
  409. Add static caching for pentatope quadrature. — cfrontin / detail
  410. Set edge length bound = 1 for 1D — ursachi / detail
  411. Added exponential and maxcubic functions — ursachi / detail
  412. 1D test cases — ursachi / detail
  413. std::stringstream has a surprisingly expensive constructor — galbramc / detail
  414. Fixed formatting — galbramc / detail
  415. Added missing copyright — galbramc / detail
  416. Added missing includes — galbramc / detail
  417. include set — pcaplan / detail
  418. merge — pcaplan / detail
  419. still default to savithru's local split — pcaplan / detail
  420. protect quadrature tests with use_conical — pcaplan / detail
  421. Deleted unnecessary includes — ursachi / detail
  422. changes to make avro grids compile again — hcarson / detail
  423. cleanup and forgotten files — hcarson / detail
  424. Progress towards avro+Wakes. Added intel19 to jenkins env. — galbramc / detail
  425. Quadrature fix. — cfrontin / detail
  426. Added Legendre4D Bases. — cfrontin / detail
  427. Adapt4D ADST should *start*. — cfrontin / detail
  428. Remove files dumped by avro — galbramc / detail
  429. Fixed missing parameter checks — galbramc / detail
  430. New CFL evolution logic (ifdef'd out) — blsc / detail
  431. Missed a file — blsc / detail
  432. Improved speed of XField_LocalPatch — galbramc / detail
  433. Allow longer time for slow test — galbramc / detail
  434. debug CG local patch — pcaplan / detail
  435. Update UniqueTrace to use UniqueElem — galbramc / detail
  436. forgot a multiply — blsc / detail
  437. Added 4D pentatope Legendre unit tests. — cfrontin / detail
  438. Complete Legendre 4D test. — cfrontin / detail
  439. Actually this time. — cfrontin / detail
  440. Universalized legendre max order, refactored variable. — cfrontin / detail
  441. first errormodel additions. — cfrontin / detail
  442. Updating the delta wing case — galbramc / detail
  443. Fixed compile errors — galbramc / detail
  444. reference element tested and ready to fly. — cfrontin / detail
  445. More compile fixes for DeltaWing. avro works again with it. — galbramc / detail
  446. Logic updates for PTC to hypersonic — blsc / detail
  447. Skip blank backtrace numberes. Lots of work towards avro+Wakes — galbramc / detail
  448. Fixed test for lagrange basis function spacetime, moving coords to inherited class from base class. — cfrontin / detail
  449. warning fix, you dumbass\! — cfrontin / detail
  450. Fixed up hashing and added unit tests for UniquElem — galbramc / detail
  451. fixed cross-machine tolerancing issue. — cfrontin / detail
  452. IRS updates — blsc / detail
  453. Lots of fixes for avro+Wakes — galbramc / detail
  454. Don't dump file — galbramc / detail
  455. pre merge — hcarson / detail
  456. Reduce testing in MOESS_Gradation_Optimizer_NLOPT_btest — galbramc / detail
  457. new and improved AGLS formulation — arthuang / detail
  458. premerge — pcaplan / detail
  459. Use operator() to modify avro topologyDup — galbramc / detail
  460. Updated linesearch with missing status variables — blsc / detail
  461. Add backtrace info to singular matrix. Enable VERA_ERROR for all builds with SANS_Commit.sh — galbramc / detail
  462. Quadrature fixes — galbramc / detail
  463. Removed unnecessary line — galbramc / detail
  464. Add vera to CentOS and Rhel. Undo some fixes. — galbramc / detail
  465. Added boost to LD_LIBRARY_PATH on CentOS — galbramc / detail
  466. Guard against negative nodal metrics from ImpliedMetic optimizer — galbramc / detail
  467. Updated avro and refine build to work with .tgz files — galbramc / detail
  468. Updated build of lapack and avro build to use SANS lapack — galbramc / detail
  469. Forgot to remove test hack — galbramc / detail
  470. Fixed mistake in FindLAPACK — galbramc / detail
  471. Add more diagnostics to Jacobian failure with RefCoordSolver — galbramc / detail
  472. More debug info for singular RefCoordSolve — galbramc / detail
  473. Missing include — galbramc / detail
  474. GRRRRRRRRRRRRRRRR CELL GROUP 1 NEEDS  TO BE ADDED TO RESOLVE CELL GROUPS FOR CG GRRRRRRRRRR (╯°□°)╯︵ ┻━┻ — pcaplan / detail
  475. got rid of hackery — pcaplan / detail
  476. extra space — pcaplan / detail
  477. Working towards scale invariant DenseLinAlg solves — galbramc / detail
  478. line unit test should really allow edge split since its the same as an iso split, vera fixes too — pcaplan / detail
  479. cleanup of unused debugging stuff...what a colossal waste of time — pcaplan / detail
  480. trailing whitespace — pcaplan / detail
  481. Update vera to remove scripts when warn/error is changed. Add limits inlcude where numeric_limits is used. — galbramc / detail
  482. reverting to new AGLS formulation — arthuang / detail
  483. reverting to not use Philip's split to get thru Jenkins — arthuang / detail
  484. silence warning — pcaplan / detail
  485. Updates to CMake files — savithru / detail
  486. Fix quadrature memory leak again — galbramc / detail
  487. trying to solve pivot problem... not yet though. — cfrontin / detail
  488. added assert grid. Wraps check grid in a try-catch and return true if it passes. Can use in places where checkGrid can be removed in Release mode — hcarson / detail
  489. pre merge — hcarson / detail
  490. Updates so avro+Wake appears to be working — galbramc / detail
  491. fixed ReferenceElement constraint jacobian assignment ya dingus. — cfrontin / detail
  492. fixed ReferenceElement constraint jacobian assignment ya dingus, pt. II: unit testing boogaloo — cfrontin / detail
  493. Removed pivoting change that was dumb anyway. — cfrontin / detail
  494. Combined into one file — ursachi / detail
  495. sandbox updates — arthuang / detail
  496. moving towards rans adaptive cg — arthuang / detail
  497. RANS test case working — arthuang / detail
  498. rans joukowski working for real? — arthuang / detail
  499. Fixed link errors — galbramc / detail
  500. More fixes for avro+Wake. Needs some more checks. — galbramc / detail
  501. Forgot files — galbramc / detail
  502. Fixed compile error — galbramc / detail
  503. Split up the Adaptation library by dimension — galbramc / detail
  504. Compile error fix — galbramc / detail
  505. Fix link errors — galbramc / detail
  506. Another link error — galbramc / detail
  507. Migrated single boundary layer scalarfunction from 4D to 3D+T — cfrontin / detail
  508. Remove debug files — galbramc / detail
  509. Don't run avro with wakes due to failing debug dumps in avro — galbramc / detail
  510. Split avro Wake edges that span the entire wake — galbramc / detail
  511. Trying to split segments on wakes, but I need help... — galbramc / detail
  512. Fail depends tests if files are generated — galbramc / detail
  513. Reworking MOESS to use Field_CG — galbramc / detail
  514. revert away from Philip's local split — arthuang / detail
  515. update error estimate unit test — arthuang / detail
  516. unused variable — arthuang / detail
  517. added gravity to 2D two phase case — ericdow / detail
  518. New parameters for new EPIC 10.3 executable — galbramc / detail
  519. More reworking of MOESS — galbramc / detail
  520. More cleaning of MOESS — galbramc / detail
  521. Fix ccache path for SANS_Depend tests — galbramc / detail
  522. Another script fix for depends — galbramc / detail
  523. catch invalid split for high-order — pcaplan / detail
  524. Lots more work towards refactored MOESS — galbramc / detail
  525. More work on MOESS — galbramc / detail
  526. updated ADST cases. — cfrontin / detail
  527. MOESS refactoring to use fields seems to be done. — galbramc / detail
  528. Fixed includes — galbramc / detail
  529. Fixed parallel print statement — galbramc / detail
  530. SANS optimizer was using wrong initial step matric. — galbramc / detail
  531. Fixed bug in edge length deviation — galbramc / detail
  532. Minor fixes — galbramc / detail
  533. More ping tests — galbramc / detail
  534. Split up ProjectGlobalField — galbramc / detail
  535. Asymmetric cost schedule — galbramc / detail
  536. CMake updates — galbramc / detail
  537. continued working on debugging two phase gravity fluxes — ericdow / detail
  538. TAO implied metric calculation works in parallel — galbramc / detail
  539. Fix typo — galbramc / detail
  540. Remove mesh_0.json from tests with avro — galbramc / detail
  541. More work towards parallel MOESS with TAO — galbramc / detail
  542. Some compile fixes — galbramc / detail
  543. Synchronize error models in ghost/zombie cells — galbramc / detail
  544. Parallel MOESS is very close — galbramc / detail
  545. Link error fixes — galbramc / detail
  546. Some small fixes — galbramc / detail
  547. working out RANS stabilization terms — arthuang / detail
  548. pre merge — hcarson / detail
  549. Stole MMA from NLopt to parallelize with TAO. — galbramc / detail
  550. Added paralel serial equivalence test for MOESS TAO-MMA — galbramc / detail
  551. If I TAO+MMA does not wory, try MMA+MPI — galbramc / detail
  552. oliver test is running, not getting right rates yet — arthuang / detail
  553. Added artificial viscosity to tilted reservoir test case — savithru / detail
  554. version used in the git bisect — hcarson / detail
  555. refactored stabilized CG — arthuang / detail
  556. more robust quadrature tests, shouldn't have issues with quadrature caching. — cfrontin / detail
  557. push to laptop in the middle of updating RANSSA — arthuang / detail
  558. missing term for adjoint in RANSSA.. needs unit testing — arthuang / detail
  559. rans sourcegradientjacobiangradient thoroughly unit tested — arthuang / detail
  560. Added pressure integral output for two-phase. Modified tilted reservoir test-case. — savithru / detail
  561. Parallel MMA algorithm! — galbramc / detail
  562. Forgot the unit test — galbramc / detail
  563. and the actual files — galbramc / detail
  564. more forgotten files — galbramc / detail
  565. Some vera fixes — galbramc / detail
  566. took out demote surreal — arthuang / detail
  567. unit tests updated for stabilized integrand — arthuang / detail
  568. changes to error model to use order scaling in the regularization — hcarson / detail
  569. A number of fixes for parallel MOESS — galbramc / detail
  570. copyright notice fix — hcarson / detail
  571. fixing a function that got mangled somehow/sometime — hcarson / detail
  572. license error — hcarson / detail
  573. Updated ErrorModel_Element unit test — galbramc / detail
  574. Fixed warning and relaxed tolerance — galbramc / detail
  575. More minor fixes — galbramc / detail
  576. Added another derivative of St option — galbramc / detail
  577. Really really relaxed tolerance for Parallel/Serial equivalence for TAO with Intel... not sure whats up with that... — galbramc / detail
  578. updates to strongform integrand — arthuang / detail
  579. added needed hooks to 3D for stabilized CG — arthuang / detail
  580. Updated unit tests and whatno — blsc / detail
  581. Nightly fixes — galbramc / detail
  582. Trying to improve the speed of XField_Lagrange — galbramc / detail
  583. add RANS ndconvert omterface — arthuang / detail
  584. fixed up RANS asymptotic — arthuang / detail
  585. added trace on scalar, bug in new source fcn in 3d — arthuang / detail
  586. fixed unit test, mod source — arthuang / detail
  587. new adjoint analytic function for 1D BL — arthuang / detail
  588. added needed hooks for AV, implementation will be needed — arthuang / detail
  589. getting unit tests to pass — arthuang / detail
  590. working on RANS... — arthuang / detail
  591. relax tol on unit test — arthuang / detail
  592. truly linear adjoint — arthuang / detail
  593. caught some bugs, put in unit tests — arthuang / detail
  594. pre merge — hcarson / detail
  595. Quadrature fix on AD3DST. — cfrontin / detail
  596. AD4DST refactor. — cfrontin / detail
  597. orthodoxy is unconsciousness. — cfrontin / detail
  598. quadrature fixes — cfrontin / detail
  599. New unit tests and other updates — blsc / detail
  600. Moving stuff to hypersonic — blsc / detail
  601. More to hypersonic — blsc / detail
  602. AD4D update. — cfrontin / detail
  603. Fixed some analyzer warnings — galbramc / detail
  604. One more analyzer suppression — galbramc / detail
  605. Some MPI cleanup — galbramc / detail
  606. target dof factor — pcaplan / detail
  607. always forget to switch local split — pcaplan / detail
  608. horizontal tab — pcaplan / detail
  609. wake tests were originally off — pcaplan / detail
  610. Finalized moving nDOFpossessed to Field — galbramc / detail
  611. Added missing include — galbramc / detail
  612. settings for Marshall to run — hcarson / detail
  613. Fixed a bug in PTC residual indexing — shunz / detail
  614. Add debug information for MassMatrix singular matrix errors — galbramc / detail
  615. fixes to mesh adapt — hcarson / detail
  616. Missing include — galbramc / detail
  617. Enabled daisy chain in algebraic equation set class for PTC.  Refactored (and hopefully clarified) calculation of pseudo-transient contributions to residuals and jacobians — shunz / detail
  618. Fixed a bug in PTC AES's cell group integration calls, and a bug in residualPseudoTemporal daisy-chain call — shunz / detail
  619. Enabled PTC for coupled IBL of 4x4 block system — shunz / detail
  620. Updated unit test — shunz / detail
  621. CG RANS is looking more promising... — arthuang / detail
  622. loops in rans joukowski — arthuang / detail
  623. One more missing include — galbramc / detail
  624. fixes for jenkins — hcarson / detail
  625. fixed excessively small initial case... now starting from predicted uniform box size. — cfrontin / detail
  626. Added solve4d smart dof case. — cfrontin / detail
  627. added hooks for BICGStab — arthuang / detail
  628. Speed improvements for UniqueElem and XField_Lagrange — galbramc / detail
  629. Purged matrix manipulation Nishida hack — galbramc / detail
  630. fixed test to match ErrorModel_Elemental.h — hcarson / detail
  631. One move too many — galbramc / detail
  632. playing around with stabilization — arthuang / detail
  633. RANS with scaling — arthuang / detail
  634. Fix for jenkins parallel make — galbramc / detail
  635. Updates to porous media PDEs: added gravity to 2D two-phase, added pressure output functional — savithru / detail
  636. Vera fixes — savithru / detail
  637. Fixed copyright notice — savithru / detail
  638. One more fix.. — savithru / detail
  639. Fix uninitialized value — savithru / detail
  640. Some cleanup in PTC — shunz / detail
  641. Fixed a bug in PTC daisy chain implementation: previously, past solution and time step field was not properly updated for daisy-chained equations — shunz / detail
  642. reapply quadorder fix. — cfrontin / detail
  643. Fix for singular matrix detection. Only guard against 1/0. — galbramc / detail
  644. modified some scalar functions — pcaplan / detail
  645. Separating out LAPACK from LAPACKE — galbramc / detail
  646. Fixes for LAPACK interface — galbramc / detail
  647. Forgot to switch back a change — galbramc / detail
  648. Only test with LAPACKE on reynolds — galbramc / detail
  649. Don't show LAPACKE as an option on OSX — galbramc / detail
  650. Minor fix — galbramc / detail
  651. Include MKL in coverge testing — galbramc / detail
  652. Source intel for coverage — galbramc / detail
  653. Fixes for checking LAPACK — galbramc / detail
  654. Automatic checking of all lapack functions used by SANS — galbramc / detail
  655. Some small fixes — galbramc / detail
  656. Relax tolerance a bit more for intel — galbramc / detail
  657. Added maximum rate matrix output — galbramc / detail
  658. updated i/o on 4d cases. — cfrontin / detail
  659. New files for Adjoint consistent potential — galbramc / detail
  660. Cleanup trace matrix print — galbramc / detail
  661. Forgot a file — galbramc / detail
  662. working on RANS — arthuang / detail
  663. Fixes for latest refine — galbramc / detail
  664. agls formulation looks better? — arthuang / detail
  665. modified RANS tests — arthuang / detail
  666. pre merge — hcarson / detail
  667. typo denomerator to denominator — hcarson / detail
  668. caught an indexing bug with interior trace groups — hcarson / detail
  669. some tweaks as was retesting using elemental estimates. They still don't work (phew....) — hcarson / detail
  670. changed the Galerkin DoubleBL case to match up with the DG one — hcarson / detail
  671. changed checkGrid() to assert(assertGrid()). This is the same as checkGrid() in debug mode, but gets removed in release — hcarson / detail
  672. bug fixes and clean up — hcarson / detail
  673. undoing the assertGrid, it doesn't work how I thought it did — hcarson / detail
  674. updated io on 2D+T cases. — cfrontin / detail
  675. fixed solve4d i/o — cfrontin / detail
  676. fixes to make the avro grids work in the adapt — hcarson / detail
  677. fixed h approximation, *philip's tableflip emoticon*. — cfrontin / detail
  678. oops. — cfrontin / detail
  679. hooks for modifying order and power and command line — hcarson / detail
  680. fixed dumbass error. — cfrontin / detail
  681. Minor fixes per intel guide. Fix avro+wake. — galbramc / detail
  682. still working on RANS... — arthuang / detail
  683. Some fixes for BLAS and turn off one Wake test — galbramc / detail
  684. adding new parmafield builders — arthuang / detail
  685. Forgot file dump — galbramc / detail
  686. Updated EPIC interface — galbramc / detail
  687. distance function gradient working — arthuang / detail
  688. hack for sourcegradient compiles — arthuang / detail
  689. unitialized warnings from jenkins — hcarson / detail
  690. tweak for hypersonic — hcarson / detail
  691. found a bug in RANS source gradients — arthuang / detail
  692. this one not that one — arthuang / detail
  693. deprecated ElementDual local patch. Everyone can use Element now, and it should throw an exception if you run with ElementDual — hcarson / detail
  694. added the spaceType to the dummy problems — hcarson / detail
  695. sigh. forgot they need override — hcarson / detail
  696. maaaaaan — hcarson / detail
  697. sigh — hcarson / detail
  698. Fix for PETSc 3.11 — galbramc / detail
  699. moved the all_reduce inside the #define of Boundary Outputs. The FunctionalCell_Galerkin already includes an all_reduce — hcarson / detail
  700. Setup for Mike Park to test metric calculations — galbramc / detail
  701. commiting the new error model and the two double boundary layer cases to run on hypersonic — hcarson / detail
  702. Fix nightly clang warning — galbramc / detail
  703. typos and a small test for the DOF Map, didn't catch anything... — hcarson / detail
  704. playing with formulations, added source to BC — arthuang / detail
  705. getting closer — arthuang / detail
  706. SA wake test case — arthuang / detail
  707. minor edits to rans, unit tests — arthuang / detail
  708. better singular perturbation boundary layer case — pcaplan / detail
  709. i think the stabilization is sound... — arthuang / detail
  710. hugh's suggestion for a dimension-independent error model — pcaplan / detail
  711. Added case to adaptND_mesh_optimizer_toy to easily generate unstructured uniform grids. — cfrontin / detail
  712. SolveND_DGBR2_AD_ST_toy for 3D and 4D now have grid loading capability, but it's ifdeffed out for now. — cfrontin / detail
  713. fixed #define — cfrontin / detail
  714. start from DG grids — arthuang / detail
  715. more tinkering with RANS — arthuang / detail
  716. Some updates for a few things I' — blsc / detail
  717. nitsche param now includes source term — arthuang / detail
  718. Added 2D+T CG unstabilized advection diffusion mechanics. — cfrontin / detail
  719. added an integrand for estimating the square of the L2 error locally — hcarson / detail
  720. locked the TopoDim template to the Topology::TopoDim template. We should not be templating on both here, these should be removed — hcarson / detail
  721. added some integral tests — hcarson / detail
  722. A class for computing L2 error estimates, either nodally or elementally — hcarson / detail
  723. Reduced ErrorOrder_4D_DG_Pentatope_btest max grid size to reduce runtime — galbramc / detail
  724. Fixed uninitialized data with intel — galbramc / detail
  725. removed TopoDim from the for_each_XXX functions. Also added Topology::CellTopoDim, which gives the dimension of the topology for which Topology was a trace. — hcarson / detail
  726. Also made a GalerkinLib in the process of splitting out the local solve machinery for CG to use in the L2 proction solver — hcarson / detail
  727. fixing up unit tests to match new indicator calculation. Also changing mitState Nitsche to use the p independent lengthL. Will then need to choose constants properly some other way. — hcarson / detail
  728. A Nodal error estimate order test — hcarson / detail
  729. refactor into explicit instantiations and added GalerkinLib to a CMakeLists.txt I forgot — hcarson / detail
  730. more instantiations and fix a bug — hcarson / detail
  731. moving towards a CG L2 local projection. — hcarson / detail
  732. updating error estimate order tests. DG now uses the mitState BC, the CG one does not as it can't achieve the rates. There must be an instability in the adjoint.... — hcarson / detail
  733. Use CG local patch bcs for the local solve — hcarson / detail
  734. actually added the declaration to the header... — hcarson / detail
  735. Added a re-roll of the c++-14 make_unique feature — hcarson / detail
  736. Added a re-roll of the c++-14 make_unique feature — hcarson / detail
  737. first use of make_unique. — hcarson / detail
  738. ErrorEstimateL2 should now handle p0 or p1 estimation gracefully, and also actually handled that stupid merge conflict — hcarson / detail
  739. Fixed many clang analyzer complaints — galbramc / detail
  740. new MDG directory — arthuang / detail
  741. MDG integrand cell unit test passing — arthuang / detail
  742. changed name of test and added the notebook that generated the L2 error integrand tests — hcarson / detail
  743. forgot an mpi include — hcarson / detail
  744. all_reduce only works on POD not the KahanSum — hcarson / detail
  745. some tweaks — hcarson / detail
  746. interior trace w/ 1d unit test — arthuang / detail
  747. missed a bracket in the merge — arthuang / detail
  748. unit test to ensure boundary coordinates of 4d meshes are correct since these are frequently used in sandbox tests...and they are correct... — pcaplan / detail
  749. jacobian ping test added for cell,trace — arthuang / detail
  750. forgot to turn CG LG trace back on — hcarson / detail
  751. added CG sandbox for AD 2D+T problem. — cfrontin / detail
  752. Fixed more analyzer warningw — galbramc / detail
  753. fixed for push, incorporated hugh's mistakenly included preprocessor define. — cfrontin / detail
  754. more hugh fixes plus trueoutput fixes. — cfrontin / detail
  755. SolverInterfaceL2 project actually uses the correct local patch for CG now — hcarson / detail
  756. JEEEEENNNNKIONNNNSSSSS — cfrontin / detail
  757. added SA nitsche — arthuang / detail
  758. jacobian and residual unit tests passing — arthuang / detail
  759. Fixed typo — galbramc / detail
  760. jenkins punched me in the face *again*. — cfrontin / detail
  761. MDG solve works.. needs debugging — arthuang / detail
  762. grumble — cfrontin / detail
  763. VOLUME_WEIGHTED crept through on those last commits. It shouldn't have and this fixes that — hcarson / detail
  764. why oh why did i not save the fixes last time — cfrontin / detail
  765. preprocessor sandbox troubles. — cfrontin / detail
  766. dumb preprocessor stuff fix. — cfrontin / detail
  767. bad include habits fixed. — cfrontin / detail
  768. MDG solves! optimal rates! — arthuang / detail
  769. warning fix. — cfrontin / detail
  770. moved some includes into the cpps — hcarson / detail
  771. removed PrimalNeighbors and added in Vertex — hcarson / detail
  772. Created Vertex Local grid. Have the four cpp, but only Area is actually declared, others would have link errors. Also a super basic unsplit test — hcarson / detail
  773. getting closer to everything compiling — arthuang / detail
  774. moved jacobian calculations into output integrands for Galerkin. bunch of stuff still not working — arthuang / detail
  775. getting closer to passing unit tests.. — arthuang / detail
  776. unit tests updated — arthuang / detail
  777. unit test/compile fixes — arthuang / detail
  778. indentation warning — arthuang / detail
  779. last final last warning bother. — cfrontin / detail
  780. tidying solve3d_CG_AD_ST_toy — cfrontin / detail
  781. Added vertexMode to Local patch, and edgeMap constructor to LocalBase — hcarson / detail
  782. removed the vertex local specialist patch. It might eventually be faster, but the development time would be much much slower — hcarson / detail
  783. MDG jacobianfunctional in place, solves are compiling — arthuang / detail
  784. 3D+T pde stuff should be good to go. — cfrontin / detail
  785. made the central vertex always dof 0. Also added flag for whether patch comes from splitting an edge attached to the vertex — hcarson / detail
  786. MDG compiles fine but doesn't stabilize in advective limit. Hmm... — arthuang / detail
  787. forgot to include a PrimalNeighbors rename — hcarson / detail
  788. MDG working well again.. we have to figure out the Nitsche BCs — arthuang / detail
  789. Some of the updates from hypersonic before merging — blsc / detail
  790. change cb back to 2 to pass Jenkins — arthuang / detail
  791. 2D error order compiling — arthuang / detail
  792. add function hooks to 3DST — arthuang / detail
  793. added function hooks for 1d, 2d spacetime — arthuang / detail
  794. fieldweighted cell integrand for MDG — arthuang / detail
  795. Fix some issues that came up during debug build — blsc / detail
  796. added fieldweighted for MDG trace integrand — arthuang / detail
  797. More clang analyzer warning fixes. — galbramc / detail
  798. more needed function hooks — arthuang / detail
  799. change to isothermal wall BCs, push to hypersonic — arthuang / detail
  800. ughhhhhh more ndconvert troubles — arthuang / detail
  801. add isothermal to RANs BCs — arthuang / detail
  802. working towards the nodal model. Moving to laptop — hcarson / detail
  803. working towards local indicator — hcarson / detail
  804. added the Simplex meta class — hcarson / detail
  805. moving to lab box — hcarson / detail
  806. removed unused typedef — arthuang / detail
  807. Nightly fixes — galbramc / detail
  808. fixed mdg unit tests — arthuang / detail
  809. Propogating changed from develop — blsc / detail
  810. Nightly fixes — galbramc / detail
  811. reordered MDG jac, added error estimate cell — arthuang / detail
  812. merge conflict — hcarson / detail
  813. RANS cases working pretty well, pushing to hypersonic — arthuang / detail
  814. mdg error estimates in place — arthuang / detail
  815. took out adjointState functions (mostly) — arthuang / detail
  816. completed sourceJacobianHACK change. MDG adjoints not quite working... — arthuang / detail
  817. Think I've got all the updates from hypersonic — blsc / detail
  818. 4d cg fields starting up... — cfrontin / detail
  819. error estimate unit test passing, but sandbox case is off... — arthuang / detail
  820. mdg error estimates working! — arthuang / detail
  821. typo — arthuang / detail
  822. cleanup — arthuang / detail
  823. moved into the SANS namespace — hcarson / detail
  824. removed Topology template, used Simplex<TopoDim> instead — hcarson / detail
  825. fixed hack interface — arthuang / detail
  826. added sub-cell step matrix accessor with 1D and 2D unit tests — hcarson / detail
  827. added unit testing for 3D RANS fncs, other cleanup — arthuang / detail
  828. forgot a file — arthuang / detail
  829. sandbox edits — arthuang / detail
  830. complaining about includes? — arthuang / detail
  831. unused variables.. push to tucano for memcheck — arthuang / detail
  832. unit test name change — arthuang / detail
  833. missing definition — arthuang / detail
  834. trying to fix segfault — arthuang / detail
  835. fixed the warning, but there's a segfault somewhere in edgelocal3d... — arthuang / detail
  836. wow that was really dumb but took 4 hours to find — arthuang / detail
  837. putting Nitsche into stabilization object.. stil lin process — arthuang / detail
  838. premerge — arthuang / detail
  839. most things compiling... — arthuang / detail
  840. added affine invariant implied metric calculation — hcarson / detail
  841. nitsche parameter change complete.. things seem to compile ok — arthuang / detail
  842. member variables out of order — arthuang / detail
  843. Added unit tests for gravity term in PDETwoPhase2D + some cleanup — savithru / detail
  844. tweaks to get MDG working for systems — arthuang / detail
  845. fixed checks for parallel — arthuang / detail
  846. whoops switched back — arthuang / detail
  847. hopefully more correct for parallel? — arthuang / detail
  848. Nightly fixes — galbramc / detail
  849. Another nightly fix — galbramc / detail
  850. More nightly fixes — galbramc / detail
  851. Another nightly fix — galbramc / detail
  852. big refactor of the edge solve. Removed the cell group business, and now builds nodal models from the data of the edge solves. No testing quite yet, but it compiles! — hcarson / detail
  853. on the way to 4d-ification of CG... — cfrontin / detail
  854. Hopefully last warning fix — galbramc / detail
  855. more of the same... — cfrontin / detail
  856. minor edits that shouldn't affect anything — arthuang / detail
  857. Merge conflict resolution and formatting issues — blsc / detail
  858. added a cell->node map to the nodalview. Also fixed a bug with edge local not correctly identifying that a node can be common to both vertices without sharing a cell with the edge. Basically a real niche case — hcarson / detail
  859. added hashing function for GroupElemIndex. Uses boost::hash. Can now use unordered_set and unordered_map on GroupElemIndex. Should be faster in those cases where we don't need orderedness, only unique — hcarson / detail
  860. tiny tweaks. uses linspace — hcarson / detail
  861. tweaks to the affInv implied metric option. Also forgot to add the #if for reference step calc — hcarson / detail
  862. added some commented code for inspecting eigenvalues for a 2x2 system. Useful for debugging — hcarson / detail
  863. MDG with discontinuous efld.. does better! — arthuang / detail
  864. working towards error estimate from fine scale — arthuang / detail
  865. minor change to AGLS — arthuang / detail
  866. missed a function update — arthuang / detail
  867. push to hypersonic — arthuang / detail
  868. push to hypersonic — arthuang / detail
  869. few changes to MDG output — arthuang / detail
  870. mdg rans sandbox compiling — arthuang / detail
  871. extra args for output — arthuang / detail
  872. print resid bug fix — arthuang / detail
  873. MDG qp should initialize to zero — arthuang / detail
  874. Commented out some stuff (with developer exceptions), will have to go back to that code — blsc / detail
  875. Updated tolerances — blsc / detail
  876. Removed unused variables — blsc / detail
  877. add nitsche to mdg traces — arthuang / detail
  878. towards p= 1+ 3D+T AD... — cfrontin / detail
  879. update mdg solutiondata constructor — arthuang / detail
  880. experimenting w upwind bcs — arthuang / detail
  881. compiling — arthuang / detail
  882. moving to hypersonic — hcarson / detail
  883. Formatting fixes — blsc / detail
  884. experimenting with distance fcn gradients again — arthuang / detail
  885. fixing some bugs and moving to hypersonic — hcarson / detail
  886. another flag to turn off the metric dumping — hcarson / detail
  887. More vera warnings — blsc / detail
  888. separated Nitsche order and stabilization order — arthuang / detail
  889. Fixed unit test bug — blsc / detail
  890. changed FrobNormSq formula for MatrixSymS to exploit the symmetry — hcarson / detail
  891. added an inner product for VectorS. Can also handle a range of weighted inner products, with MatrixS, MatrixSymS and a diagonal — hcarson / detail
  892. added some instantiations, also started using the InnerProduct function directly — hcarson / detail
  893. dgbr2 joukowski w solver interfaces — arthuang / detail
  894. added some 3D+T CG stuff ... work in progress... added 1D+T AD for learning syntax, added a lot of comments. — cfrontin / detail
  895. changed to 1 pt quadrature implied metric calculation. — hcarson / detail
  896. added mean, min, max quality calculator and output in the NLOPT output — hcarson / detail
  897. linked the use of the modified model to the use of the SANS optimizer. No longer compile time flag — hcarson / detail
  898. removed VOLUME_WEIGHTED and added FULL_NODAL. This compile time flag needs to be set to run in the nodal view of the world. Long term this will be the way to go, but it only works in serial presently, so leaving it disabled by default — hcarson / detail
  899. forgot to fix the mpi bit — hcarson / detail
  900. apparently boost::mpi needs its own special minimum and maximum functions... — hcarson / detail
  901. shortened the file by removing unneeded commenting and dead space — hcarson / detail
  902. missing 4d instantiation and an attempt at removing the compiler error. At least I compiled gnu5 and couldn't recreate it... — hcarson / detail
  903. maybe this works? — hcarson / detail
  904. forgot that we can't actually dump 4d grids... — hcarson / detail
  905. changed the exception to a warning — hcarson / detail
  906. forgot to rename them edge tests — hcarson / detail
  907. sigh — hcarson / detail
  908. manually return group and elem to make intel happy. Also reduced the number of shuffles to 3 in the implied test — hcarson / detail
  909. changed the tolerances a little, should now be able to do more shuffles — hcarson / detail
  910. changed the initial condition for the optimization to Log Euclidean. Had a case where affine invariant failed the non-linear solve, so lets just skip that — hcarson / detail
  911. Increasing coverage — blsc / detail
  912. only doing 1 shuffle in 3D because the bloody coverage takes too long — hcarson / detail
  913. I swear... — hcarson / detail
  914. using the max in the implied calculation. The optimization is so much easier/faster — hcarson / detail
  915. added a 3d corner singularity and also made the 3D L2 adapt flag based — hcarson / detail
  916. tweaks to try speed this damn thing up and get it through jenkins — hcarson / detail
  917. correct beta val — hcarson / detail
  918. added more iterations to the AffInv calc, and use the FrobNorm from DLA — hcarson / detail
  919. save the last mesh, explicitly 2D folder, and Affine Invariant metric calculation — hcarson / detail
  920. added the objective of maximizing average quality, this is also not a good one, but unsure what to do... — hcarson / detail
  921. changed the range for the loops, so that the lower dof counts can be run serial — hcarson / detail
  922. More coverage — blsc / detail
  923. Nightly fixes — blsc / detail
  924. changed AffInv to throw exception and revert to Log Euclidean. Also raised the tolerance slightly, as the tolerance is done the norm. Thus sqrt(eps) = 1e-8, so setting tol to 1e-7 — hcarson / detail
  925. fixed betas. reset dump Metric to every iteration. changed 3D to dump the final qfld with the same filename — hcarson / detail
  926. use the max det met — hcarson / detail
  927. Cleaned up well models, modified fixed outflow rate well to use a distributed source term, added a new output function for computing bottom-hole pressure of fixed rate wells — savithru / detail
  928. temp patch for 4D grid io — cfrontin / detail
  929. switch to sine^4 exact solution for solve4d cases. — cfrontin / detail
  930. added outerproduct for VectorS — hcarson / detail
  931. Hopefully faster 3D eigen solves — galbramc / detail
  932. Forgot unit tests — galbramc / detail
  933. Added an enum class for adding quality to the implied metric objective, can do maximize or minimize inverse. Also InverseLengthTensor for calculating the metric. Also fixed up the AffineInvariant calculation to use the correct Gradient descent algorithm from Pennec, thus it actually works now. — hcarson / detail
  934. tweaks for cases — hcarson / detail
  935. much reduced the tolerance for the affine invariant calculation. The non-linear optimization is really not that bad, and it is the most theoretically justifiable metric, so we should use it — hcarson / detail
  936. some typo fixes, some documentary additions, some work on 4d CG field structures. CG not working yet for 4D w/ order > 1. needs some DEVEL EXCEPTIONS before push. — cfrontin / detail
  937. hypersonic changes — pcaplan / detail
  938. Added the correct output functional for computing the bottom-hole pressure of a fixed-rate well — savithru / detail
  939. a forgotten rename — hcarson / detail
  940. Fix for new 3D eigen value calculation — galbramc / detail
  941. Relaxed a tolerance — galbramc / detail
  942. debugging hell. — cfrontin / detail
  943. Fix intel leak. Better logic checking for refine. — galbramc / detail
  944. moving to hype — hcarson / detail
  945. Updates to track CAD parameters with avro — galbramc / detail
  946. some comments. Also changed the affine invariant calculation to count the number of unconverged solves, record the maximum norm and also increased the tolerance — hcarson / detail
  947. moving branch — hcarson / detail
  948. stylish stylish jenkins — hcarson / detail
  949. Some fixes for avro. Show implied metric cost. — galbramc / detail
  950. changed the advection direction for the Triple BL. Was displaying low-rank structure (>p+1 convergence), suspect because of fluke with rotational symmetry — hcarson / detail
  951. actually using mpi properly hopefully. Also fixed the test for the affine invariant calc — hcarson / detail
  952. make the print to screen scientific so it's actually informative — hcarson / detail
  953. figured out xfield trace coordinates arent matching their element compadres. added unit tests, still not passing though. — cfrontin / detail
  954. Fixes for avro with full potential — galbramc / detail
  955. Fix typo and warning — galbramc / detail
  956. its an unsigned int not a Real you fool — hcarson / detail
  957. Fixes for CAD parameters with avro in parallel — galbramc / detail
  958. Fixed TraceToCellRefCoord_Pentatope. — cfrontin / detail
  959. 4d xfield trace coordinate ordering bug fixed and re-tested. back to working on cg construction. probably some nefarious stuff in 4d-land that needs to be exceptioned out, but currently only im in that region. — cfrontin / detail
  960. warning fix — cfrontin / detail
  961. remove debugging ifdef switch. — cfrontin / detail
  962. Updated Wake+avro tests with curvature — galbramc / detail
  963. Missed file dump — galbramc / detail
  964. still tryna pass jenkins. added avro switching. — cfrontin / detail
  965. add interfacest to Phil's localpatch to work with Hugh's — arthuang / detail
  966. ffs ifdef SANS_AVRO again — cfrontin / detail
  967. forgot to only report unconverged if actually unconverged — hcarson / detail
  968. fixed tracetocellrefcoord bug side-effects. everything truly broken should have developer exceptions too now. — cfrontin / detail
  969. fixed bug in volume output functional — arthuang / detail
  970. setting the values of beta to those espoused in the proof paper — hcarson / detail
  971. Changed the AD cases to use similar command line interface to the L2 cases. Changed the advection directions to not be aligned with diag. Changed the peclet numbers to be 25 for all cases (unitary advection magnitude), should give reasonable order convergence without wild dof counts. Also changed the exact output calculations to be symbolic, so we can change the advection and diffusion values without having to recalculate — hcarson / detail
  972. added x vs h and x vs AR dumping for the BL case. Doesn't really seem to show very much though, I think Masa was being cheeky — hcarson / detail
  973. Unified and cleaned up output functionals for 2D two-phase. Added unit tests for BHP calculations. — savithru / detail
  974. Changed implied optimization from -Q to 1-Q. Fixes so full potential works with adaptation. — galbramc / detail
  975. Maybe fixed nightly warning — galbramc / detail
  976. Fixed build error — galbramc / detail
  977. Fixed warning — savithru / detail
  978. nightly fix — cfrontin / detail
  979. One more — savithru / detail
  980. A few more compile fixes — galbramc / detail
  981. vera fix 2.0 — cfrontin / detail
  982. VERA FFS A SEMICOLON?! — cfrontin / detail
  983. cleaning up some CG — arthuang / detail
  984. Put CostModel integration order back — galbramc / detail
  985. in the middle of getting CG w lifting operators — arthuang / detail
  986. forgot a file — arthuang / detail
  987. found the bug! — arthuang / detail
  988. CG w BR2 adapts up and running — arthuang / detail
  989. missing something... — arthuang / detail
  990. mod error order tests — arthuang / detail
  991. Added elementEdges function to get runtime edge maps — galbramc / detail
  992. Updates for new avro file layout — galbramc / detail
  993. Fix for clang — galbramc / detail
  994. Fixes for g++-9 — galbramc / detail
  995. Removed the avro instance — galbramc / detail
  996. Fix weekly clang compile error — galbramc / detail
  997. Fixed weekly memory leaks — galbramc / detail
  998. moving back towards MDG stuffs — arthuang / detail
  999. forgot a file — arthuang / detail
  1000. copyright vera error — arthuang / detail
  1001. got rid of whitespace — arthuang / detail
  1002. making things consistent for Nitsche, MDG — arthuang / detail
  1003. got rid of avro include — arthuang / detail
  1004. missed a update on nitsche — arthuang / detail
  1005. fixedu nit test — arthuang / detail
  1006. update error order test — arthuang / detail
  1007. Added ksabo@mit.edu to DeveloperEmailAddresses — ksabo / detail
  1008. relax tol for intel — arthuang / detail
  1009. vera fix — pcaplan / detail
  1010. more vera fixes.. — pcaplan / detail
  1011. avro interface fixes.. — pcaplan / detail
  1012. curly braces... — pcaplan / detail
  1013. curly braces again... — pcaplan / detail
  1014. whitespace + tab — pcaplan / detail
  1015. more vera fixes................. — pcaplan / detail
  1016. ckf vera fixes — pcaplan / detail
  1017. merge of ckf test — pcaplan / detail
  1018. whether dummy or input mesh, result is the same — pcaplan / detail
  1019. updated tolerances for unit tests — ksabo / detail
  1020. explicit constructor for nightly — pcaplan / detail
  1021. More zombies for Edge local solves — galbramc / detail
  1022. Updated valgrind version — galbramc / detail
  1023. Fixed array out of bound — galbramc / detail
  1024. refine did nothing! — galbramc / detail

#240 (Jun 23, 2019, 11:44:39 PM)

  1. Reworked build of parmetis. refine uses parmetis. added avro build. — galbramc / detail
  2. minor edits to edge local unit tests — arthuang / detail
  3. Fixes for avro and refine — galbramc / detail
  4. Suppress warning — galbramc / detail
  5. Parallel Field4D test fixes. Give refine more time. — galbramc / detail
  6. Relaxed tolerance for intel — galbramc / detail
  7. Don't run ErrorOrder_4D in parallel — galbramc / detail
  8. Updated refine build — galbramc / detail
  9. Updated refine check — galbramc / detail
  10. Nightly build fixes... plus a stopgap ifdef until the SVDless 4D normal vector is done. — cfrontin / detail
  11. Reduce run time of 4D error order check — galbramc / detail
  12. Relaxed another tolerance — galbramc / detail
  13. trying out some edge stabilization — arthuang / detail
  14. MCMC things and got the temp sensors working — hcarson / detail
  15. Remove files written by avro — galbramc / detail
  16. Dissable refine testing for now — galbramc / detail
  17. Added memcheck to parmetis build — galbramc / detail
  18. Ignore external parmetis — galbramc / detail
  19. added hessian to interior trace — arthuang / detail
  20. edge stabilization working-ish? — arthuang / detail
  21. changing branch — hcarson / detail
  22. MC for running on hypersonic — hcarson / detail
  23. ready for running on hypersonic — hcarson / detail
  24. Generalized valgrind suppression — galbramc / detail
  25. moving to hypersonic again — hcarson / detail
  26. egads coords must have 3 dimensions even in 2d — pcaplan / detail
  27. the final files from the project — hcarson / detail
  28. forgot a function — hcarson / detail
  29. pushing to tucano — arthuang / detail
  30. Suppressed CMakeLists errors. [TBD] — shunz / detail
  31. Fixed panel metod tests — shunz / detail
  32. AFLR4 updates and some Jenkins scripts — galbramc / detail
  33. Link tetgen before avro — galbramc / detail
  34. instantation of elementlocal version of local splits for 4d...unit test will fail because the result is different than savi's convention — pcaplan / detail
  35. missing definitions for elementlocal & edgelocal — pcaplan / detail
  36. some instantiations of savi's method for doing local splits — pcaplan / detail
  37. xfield_lagrange method of doing local splits...still debugging...will fix later... — pcaplan / detail
  38. Refactoring.  Patched unit tests — shunz / detail
  39. More unit tests — shunz / detail
  40. added unit tests — shunz / detail
  41. Fixed unit tests — shunz / detail
  42. Fixed IBL unit tests — shunz / detail
  43. Added unit test.  Turned off unused methods. — shunz / detail
  44. Fixed a bug in CMakeLists: use of out-of-scope variable — shunz / detail
  45. Fixed a bug in cmake files that only appear when building with Xcode — shunz / detail
  46. Refactored ping test input array type.  Fixed IBL-related 4x4 block system ping tests.  Added missing MPI-related method definitions for pure virtural methods — shunz / detail
  47. Relocated code into SANS_MPI macros; otherwise, errors are raised about "member access to incomplete type" — shunz / detail
  48. Verified/fixed/cleaned IBL system tests with transition (full upwind). — shunz / detail
  49. Fixed duplicate naming of boost test suite — shunz / detail
  50. Relaxed pyrite tolerance — shunz / detail
  51. Updated forced-transition pyrite files after the bug fix in commit b30121ee5531d91e84aac94fbdab6462f458f4f8 — shunz / detail
  52. Turned off file dump — shunz / detail
  53. Fixed formatting — shunz / detail
  54. Fixed empty traling line — shunz / detail
  55. Fixed DG and HDG AES tests for uncoupled IBL — shunz / detail
  56. Fixed formatting — shunz / detail
  57. Reverted changes to (viscous) HDG stuff: those abandoned changes treated qfld and afld as a single bundle field — shunz / detail
  58. Update AlgebraicEquationSet_HDGAdvective_Advection_btest.cpp — shunz / detail
  59. Fixed one more test affected by ping test refactoring.  Fixed formatting and screen output — shunz / detail
  60. Fixed another system test affected by IBL Qauxv interpreter refactoring — shunz / detail
  61. Update ErrorOrder_1D_HDGAdvective_Advection_btest.cpp — shunz / detail
  62. Fixed warning and missing instantiation — shunz / detail
  63. Added an instantiation just for completeness, although it is no longer used — shunz / detail
  64. moving towards adjoint GLS — arthuang / detail
  65. Cleaned sandbox cases — shunz / detail
  66. relaxed tolerances for clang_release — shunz / detail
  67. Suppressed output — shunz / detail
  68. Fixed bugs in CMakeLists — shunz / detail
  69. Fixed HDG advection tests — shunz / detail
  70. Removed the pure advection test case using (viscous) HDG machinery — shunz / detail
  71. parallel outputs in galerkin solver interface, AGLS error estimation fixed? — arthuang / detail
  72. Refactored halving line search and fixed unit tests — shunz / detail
  73. Fixed memory errors — shunz / detail
  74. Relaxed tolerance for intel — shunz / detail
  75. relaxed tolerances for intel18 — shunz / detail
  76. Relaxed timeout limits — shunz / detail
  77. Speed up unit tests in response to Jenkins timeout — shunz / detail
  78. Fixed typo — shunz / detail
  79. Relaxed tolerance for gnu48 — shunz / detail
  80. Tried to fix timeout on Jenkins testing (coverage_clang reynolds) — shunz / detail
  81. Reverted CMakeLists to see if TIMEOUT is set properly this time on Jenkins — shunz / detail
  82. minor refactoring — shunz / detail
  83. Refactored CMakeLists for Xcode build — shunz / detail
  84. Refactored Newton solver — shunz / detail
  85. Minor fix — shunz / detail
  86. Fixed warnings — shunz / detail
  87. Added IBL max update fraction — shunz / detail
  88. Enabled under-relaxed Newton update for coupled 4x4 block system of IBL with free transition. — shunz / detail
  89. Refactor of avro XField interface — galbramc / detail
  90. Consistent logic for setting cmake testing timout property — galbramc / detail
  91. Fixed refine interface change — galbramc / detail
  92. Fix ifdef when not using avro — galbramc / detail
  93. More fixes to deal with avro — galbramc / detail
  94. Minor cleanup — galbramc / detail
  95. Added unit tests for IBL updateFraction — shunz / detail
  96. Upgrade PETSc — galbramc / detail
  97. More avro and PETSc tweaks — galbramc / detail
  98. I don't understand why dl library is needed to link a static library... — galbramc / detail
  99. Fix for refine check — galbramc / detail
  100. Suppress compiler warning when building PETSc — galbramc / detail
  101. Fix for avro with 4D — galbramc / detail
  102. Enable refine testing again — galbramc / detail
  103. Updated copyright date to 2019 — galbramc / detail
  104. Updated copyright date to 2019 — galbramc / detail
  105. dimension-independent local splits — pcaplan / detail
  106. timing tests show dim-independent implementation on par with savithru's impl...tried to debug hugh's local xfield in primal mode but something is wrong...unit tests on the way — pcaplan / detail
  107. adding stabilized error estimation infrastructure — arthuang / detail
  108. more playing with AGLS — arthuang / detail
  109. minor edits — arthuang / detail
  110. reconciling merge conflicts and some tweaks — hcarson / detail
  111. license updates — hcarson / detail
  112. fixes to match avro — hcarson / detail
  113. forgot to add the avro defined precompile check — hcarson / detail
  114. relaxed tolerances and forgot to split world — hcarson / detail
  115. tweaking tol again... — hcarson / detail
  116. another tweak... — hcarson / detail
  117. cleanup of localpatch + commenting — pcaplan / detail
  118. copyright — pcaplan / detail
  119. more copyright — pcaplan / detail
  120. Updates for MOESS optimizations. Still needs more work. — galbramc / detail
  121. Instantiations for 4D AD solve. — galbramc / detail
  122. A few fixes — galbramc / detail
  123. Compile fixes — galbramc / detail
  124. More instantiations for 4D — galbramc / detail
  125. removed anachronistic definition of primal grid. Primal grid now matches the behavior of the normal DG grids. Unit tests have just been turned off in the meantime — hcarson / detail
  126. make sure mpi is init'd before calling rank by actually running in parallel — pcaplan / detail
  127. revert back to dual — pcaplan / detail
  128. ifdef SANS_AVRO for tests with CKF triangulation — pcaplan / detail
  129. changed to Dual in the system test — hcarson / detail
  130. attempted to fix nightly tests — shunz / detail
  131. Relaxed timings, fixed warning — galbramc / detail
  132. Updated pyrite files to fix nightly tests — shunz / detail
  133. Moved timing test into sandbox — galbramc / detail
  134. Cleanup of refine interface with auto memory management. — galbramc / detail
  135. Modest progress on instantiations. — cfrontin / detail
  136. Fix include — galbramc / detail
  137. 4D box unit grid grandfathered out of XField_KuhnFreudenthal. — cfrontin / detail
  138. added fix to 3D — hcarson / detail
  139. removed the separate 4D file, just added an instantiate at the end of 3D — hcarson / detail
  140. p=7 led to error close to machine zero, which seemed to cause touble to nightly ErrorOrder test.  Cut back p from 7 to 6 — shunz / detail
  141. p=6 still too high for pyrite test for ErrorOrder — shunz / detail
  142. Attempted to warning "use of zero-allocated memory" — shunz / detail
  143. Some cleanup in the sandbox. Added 2D L2Project adaptation — galbramc / detail
  144. Added tecplot dump for metric fields. Other small fixes — galbramc / detail
  145. Changed floor to round for generating new 1D mesh — ursachi / detail
  146. Minor refactoring — shunz / detail
  147. Compile fixes and more dependency warning suppressions — galbramc / detail
  148. Add dl library for avro — galbramc / detail
  149. Replaced nt transport equation with G variable as in SciTech paper, although the results are equivalent — shunz / detail
  150. bits and pieces — hcarson / detail
  151. added linear args and a test — hcarson / detail
  152. just wanna get my stuff in the repo — pcaplan / detail
  153. Files for parallel periodic XField2D_Box_Triangle_Lagrange (Issues need to be fixed) — kug46 / detail
  154. retrieve edge indices and sub elems from split — pcaplan / detail
  155. ref coordinates on split sub cells — pcaplan / detail
  156. Added a layer of abstractions when evaluating fluxes, sources etc. in IBL pde class — shunz / detail
  157. Fixed formatting... previously went under the radar since vera++ was not installed locally... — shunz / detail
  158. inst of some 4d adaptation things — pcaplan / detail
  159. Added scalar and dot product fixes for MatrixSymS — galbramc / detail
  160. Working on 3d ST... — cfrontin / detail
  161. Enabled smooth laminar/turbulent blending — shunz / detail
  162. Fixed SVD calculation for normal vector for 4D tet. — cfrontin / detail
  163. Scrubbed some comments. — cfrontin / detail
  164. edits to gls error estimation — arthuang / detail
  165. unit tests for basis function ref elem split — pcaplan / detail
  166. 4d adapt? — pcaplan / detail
  167. Fixed intel errors by relaxing tolerance and reconciling a missing pyrite file specialized for intel MKL — shunz / detail
  168. added a Field weighted stabilized CG nodal estimate integrand test in 2D — hcarson / detail
  169. comment — hcarson / detail
  170. Continued work on ElementXField implementations. — cfrontin / detail
  171. Vera fixes, COPYRIGHT fixes, and some avro preprocessor fixes. — cfrontin / detail
  172. Updates for 2D L2 Projection sandbox test — galbramc / detail
  173. Updates for 1D L2 Projection sandbox test — galbramc / detail
  174. Clearing out high-level exceptions whose low-level implementations are done. — cfrontin / detail
  175. Added last bits of ADST4D case, should run (?) now. — cfrontin / detail
  176. Added new trace free step matrix error model. Not enabled. — galbramc / detail
  177. added a 2D error estimate test, and asserted assumption on basis function type — hcarson / detail
  178. Fix. — cfrontin / detail
  179. fixed the estimate vary tests — hcarson / detail
  180. notebook with Double BL exact solutions — hcarson / detail
  181. forgot the copyright change — hcarson / detail
  182. Normalize MOESS optimization with nlopt — galbramc / detail
  183. Fixed undefined reference — galbramc / detail
  184. Fixed a bug in laminar/turbulent blending function — shunz / detail
  185. ifdef SANS_AVRO requirements in unit tests. — cfrontin / detail
  186. removed the scp to devastator. Should be useful for everyone now — hcarson / detail
  187. forgot to change a quadratic function explicit constructor — hcarson / detail
  188. undoing a print — hcarson / detail
  189. EQUILATERAL PENTATOPE coordinates + added unit volume check in unit test to catch this — pcaplan / detail
  190. unit test for split ref step matrix on pentatopes + generating matlab script — pcaplan / detail
  191. unit tests for error model — pcaplan / detail
  192. 4D L2 ERROR ADAPTATION WORKS...cleaning up........ — pcaplan / detail
  193. Added new MOESS optimization without global FrobNorm — galbramc / detail
  194. Forgot CMake file — galbramc / detail
  195. CG artificial viscosity in 2D — blsc / detail
  196. Small fix for cmake summary — galbramc / detail
  197. Weekly test fixes — galbramc / detail
  198. Modified AlgEqSet, IntegrandInteriorTrace and 2D DGAdvective toy for Parallel 2D Periodic Grids — kug46 / detail
  199. Towards parallel PETSc/TAO — galbramc / detail
  200. Refactored intermittency calculation — shunz / detail
  201. Generailized Projection to Qauxi to handle blended intermittency. — shunz / detail
  202. Trying to bump coverage. — cfrontin / detail
  203. Some cleanup of logEuclidian cost — galbramc / detail
  204. Added lagrange P1 to the exception — hcarson / detail
  205. copywrite update for some files — arthuang / detail
  206. Various small fixes — galbramc / detail
  207. added a Tanh2 function based on Loseille's Tanh3 — hcarson / detail
  208. Updated Embedding unit test for quadrature integration — galbramc / detail
  209. Reverted to binary intermittency as default — shunz / detail
  210. Relaxed tolerance for intel compiler.  Restored default to binary intermittency for existing tests — shunz / detail
  211. Trying to get coverage... — cfrontin / detail
  212. Tests added + un-tested, unused additions removed. — cfrontin / detail
  213. Added comments and made sure ADST4D case is ready for parallelization. — cfrontin / detail
  214. More parallel fixes. — cfrontin / detail
  215. Relaxed torleranc for gnu48 — shunz / detail
  216. More parallel fixes. — cfrontin / detail
  217. Added regularized point source to accommodate potential co-existence of free and forced transition in the captured transition treatment — shunz / detail
  218. Updated ADST3D cases (solve and adapt) for avro and MPI use. — cfrontin / detail
  219. Forgot an MPI redefine. — cfrontin / detail
  220. jk MPI fix actually this time. — cfrontin / detail
  221. Minor fix — galbramc / detail
  222. Continued avro- and MPI-ification. — cfrontin / detail
  223. Unit testing fixes. — cfrontin / detail
  224. Fixed warning. — cfrontin / detail
  225. Fixed fstream initializer. — cfrontin / detail
  226. Warning cleanup... — cfrontin / detail
  227. Fixes towards parallel+periodic — galbramc / detail
  228. Coverage improvement... — cfrontin / detail
  229. cleanup of interface to match savithru's — pcaplan / detail
  230. instantiation of 4d savithru splits (technically the extraction works because that's what i started with but the actual split does not) — pcaplan / detail
  231. Fixes for running parallel DG with periodic BCs — galbramc / detail
  232. Removed adapt4d skeleton from build. — cfrontin / detail
  233. Added instantiation — galbramc / detail
  234. ffs — cfrontin / detail
  235. instantiate SVD (with error), XField_Local calls XField_LocalPatch in 4d which local_split_patch is turned off — pcaplan / detail
  236. ifdef sans avro in sandbox file — pcaplan / detail
  237. instantiation of new MOESS SANS optimizer for 4d — pcaplan / detail
  238. experimenting w p1 adjoint — arthuang / detail
  239. adapt3d change in api — pcaplan / detail
  240. relaxed tolerance for system test — pcaplan / detail
  241. publicize error model functions...still not sure why — pcaplan / detail
  242. added note about protected methods for error model class — pcaplan / detail
  243. missing operator for 1d function — pcaplan / detail
  244. unprotected from SANS_AVRO avro namespace use — pcaplan / detail
  245. rename file to avoid copyright check — pcaplan / detail
  246. deleted file — pcaplan / detail
  247. Only have vera look at .cpp and .h files — galbramc / detail
  248. SANS_CHECK_CLOSE not BOOST_CHECK_EQUAL for floats, come on philip — pcaplan / detail
  249. bug != in shock capturing — arthuang / detail
  250. revert back to formulation — arthuang / detail
  251. add expt stab (no-op) to 2DAD — arthuang / detail
  252. Added a C2 continuous smooth abs — hcarson / detail
  253. fix intel compiler warning — pcaplan / detail
  254. add pending changes in local patch header — pcaplan / detail
  255. Run SANS_Commit in parallel — galbramc / detail
  256. Cannot specify format for 'time' on all systems — galbramc / detail
  257. Updates to SANS_Commit.sh — galbramc / detail
  258. One more parallel fix — galbramc / detail
  259. Forgot to run 'make all' — galbramc / detail
  260. Fix make warning for now — galbramc / detail
  261. dev exceptioned code required only for 4d tecplot. — cfrontin / detail
  262. added a C2 smoothabs and matlab file that generated — hcarson / detail
  263. actually got the smoothmax1, smoothmax2 functions work, also added implicitly defined smoothmin1 and smoothmin2 — hcarson / detail
  264. merge fix — cfrontin / detail
  265. merge fix 2 — cfrontin / detail
  266. working on new error models — hcarson / detail
  267. ASExpCombo function for testing L2 — hcarson / detail
  268. Revive Adapt L2Project — galbramc / detail
  269. partial cleanup of local patch before supporting CG patches — pcaplan / detail
  270. Removed PBAM — galbramc / detail
  271. fix for jenkins, smoothmax2, tweaks to SANS opt and the VectorX hack to work with Phil — hcarson / detail
  272. unparallelized a test, there's a bug in P4 Hierarchical parallel — hcarson / detail
  273. turning the P3 and P4 unsplit tests off again. There's something weird and MPI-ish going wrong here — hcarson / detail
  274. Missed one include — galbramc / detail
  275. Missed one more file — galbramc / detail
  276. more cleanup of local patch — pcaplan / detail
  277. Suppress valgrind avro+intel strange warnings — galbramc / detail
  278. Broke up DGBR2lib trying to reduce compile time — galbramc / detail
  279. pre merge — hcarson / detail
  280. support for CG local solves with XField_LocalPatch — pcaplan / detail
  281. forgot to propagate changes in function names to tests — pcaplan / detail
  282. turnon off local patch splits for jenkins — pcaplan / detail
  283. silence warning — pcaplan / detail
  284. Switched implied metric optmizer to MMA — galbramc / detail
  285. agls tweaks — arthuang / detail
  286. Relaxed tolerance — galbramc / detail
  287. complete unit tests for xfield local patch...still need some work on CG tests — pcaplan / detail
  288. merge conflict — hcarson / detail
  289. a stupid bug — hcarson / detail
  290. changes to optimizers, and also turning the modified model back off — hcarson / detail
  291. Fix work weekly — galbramc / detail
  292. Weekly suppression and revived cotire — galbramc / detail
  293. Fixed the last error. — galbramc / detail
  294. Fixed a warning — galbramc / detail
  295. Added option to use CG field for PTC time step — galbramc / detail
  296. Changed the span of the SANS frob norm penalty function — galbramc / detail
  297. unit tests for DG/CG patches — pcaplan / detail
  298. remove print_inline — pcaplan / detail
  299. Conical method of stroud added, and working. Still needs integration into pentatope. — cfrontin / detail
  300. Added a ego map to EGTessModel that maps from All egos to Unique egos — galbramc / detail
  301. add xfield for full potential code using avro — pcaplan / detail
  302. Integrated Stroud into 4D quadrature. — cfrontin / detail
  303. cleanup avro wake3d — pcaplan / detail
  304. Fixed compile error — galbramc / detail
  305. Fixed another compile error — galbramc / detail
  306. work towards high-order support for local patch split — pcaplan / detail
  307. getting unit tests to pass... — arthuang / detail
  308. fixing merge conflicts — arthuang / detail
  309. Fix up PseudoTime_btest — galbramc / detail
  310. Fixed btest memory leak. — cfrontin / detail
  311. Improved stroud testing. — cfrontin / detail
  312. experimenting with an element based local solve — arthuang / detail
  313. BCNone is dead. Long live BCNone. — hcarson / detail
  314. New Implied Metric optimizer based on logM. Various other small fixes. — galbramc / detail
  315. elemID must be global — pcaplan / detail
  316. support for high-order local patch — pcaplan / detail
  317. ifdef avro — pcaplan / detail
  318. Updates for CG 3D Euler with shock capturing and 2D RANS — blsc / detail
  319. multiple def from copy paste — pcaplan / detail
  320. uninitializaed data fix (typo) — cfrontin / detail
  321. changes to error model interface for high-order local splits — pcaplan / detail
  322. Removing problematic instantiations due to wall distance parameter with artificial viscosity for RANS — blsc / detail
  323. add info as to which type of field is being sampled — pcaplan / detail
  324. Removing code from BCEuler3D_mitState.h which was ifdef'd out — blsc / detail
  325. added integer template for equation number — hcarson / detail
  326. typo in avro wake — pcaplan / detail
  327. specialized wake model not defined without avro — pcaplan / detail
  328. added an ND test of the BCNone with and without useFluxViscous — hcarson / detail
  329. Galerkin folder passes — hcarson / detail
  330. added the downcast to NoneBC to extract the boolean — hcarson / detail
  331. converted HDG over to the new Nones — hcarson / detail
  332. Updated implied metric for TAO. Fixed a number of floating point problems. — galbramc / detail
  333. More robust testing, compiler warning silencing. — cfrontin / detail
  334. dont inherit from xfield_avro if not defined — pcaplan / detail
  335. still missing some ifdef — pcaplan / detail
  336. Various compile fixes. Generalized Adapt2D_Mesh_Optimize for all mesh generators. — galbramc / detail
  337. Missed one — galbramc / detail
  338. Warning fixes — galbramc / detail
  339. killed a few more BCTypeNone references, just plugging away — hcarson / detail
  340. pre merge — hcarson / detail
  341. Removed the BCNoneUniField — hcarson / detail
  342. Added switching for expensive PI quadrature/low-cost NI quadrature. Fixed associated tests to get correct convergence rates. — cfrontin / detail
  343. committing sandbox pre-merge — arthuang / detail
  344. someone forgot to actually use the W and B typedefs — hcarson / detail
  345. missing include — hcarson / detail
  346. fixed the CMakeLists.txt — hcarson / detail
  347. made BCNone_AV to do with annoying ArtVisc feature — hcarson / detail
  348. missing includes and last bit — hcarson / detail
  349. fixed typo: derived to dervied — hcarson / detail
  350. vera slap correction — hcarson / detail
  351. Fixed one more BCNone — galbramc / detail
  352. forgot a file — hcarson / detail
  353. Removing more of the block artificial viscosity stuff in 2D and unit test updates — blsc / detail
  354. More merge conflicts — blsc / detail
  355. More merge conflict resolution — blsc / detail
  356. Fixed memory leak. — cfrontin / detail
  357. used quadrature cache for L2 projection — pcaplan / detail
  358. fix for order = 0 integration — pcaplan / detail
  359. New cost target for SANS MOESS optimizer. Lots of work towards avro+Wakes. — galbramc / detail
  360. Fixed typo — galbramc / detail
  361. Minor fixes — galbramc / detail
  362. One more typo — galbramc / detail
  363. Unit test updates — blsc / detail
  364. Helps to use consistent array size — galbramc / detail
  365. Updates to jenkins scripts — galbramc / detail
  366. Segregating MeshAdapter — galbramc / detail
  367. Missing instantiation — blsc / detail
  368. Fixed mistake in BuildAVRO — galbramc / detail
  369. Fixes for 3D CG case with artificial viscosity — blsc / detail
  370. Fixed compile issues related to separating dimensions — galbramc / detail
  371. Initializing variables to fix some compiler warnings — blsc / detail
  372. LU factorization on processors so PETSc solves reliably — blsc / detail
  373. Missed a few — galbramc / detail
  374. IRS updates — blsc / detail
  375. Fix for gnu 4.8 — galbramc / detail
  376. Refactored tecplot output to reduce link time — galbramc / detail
  377. Forgot files — galbramc / detail
  378. Fixed muliple instantiations — galbramc / detail
  379. pre merge — pcaplan / detail
  380. Syncing with hypersonic — blsc / detail
  381. reverting a dead end — arthuang / detail
  382. Adapt4D de-mothballing. — cfrontin / detail
  383. Fixed 'potential' memory leak problem by putting frees in same scope as creation. — cfrontin / detail
  384. Suppress cppcheck bug — galbramc / detail
  385. tweaked AGLS setup, hope this one gets through!! — arthuang / detail
  386. AGLS formulation w/ correction getting good rates! push to laptop, need to fix unit tests — arthuang / detail
  387. unit tests should be working... — arthuang / detail
  388. pre merge — hcarson / detail
  389. Another cppcheck suppression — galbramc / detail
  390. clean up on choosing reSolve groups — hcarson / detail
  391. some clean up — hcarson / detail
  392. added a virtual method for computing Initial Error. The default version has the overhead of a solve associated, whereas the SolverInterface version has the cheaper version that avoids the solve and thus is more robust — hcarson / detail
  393. parameter for avro to allow for interior boundaries needed for wake models — pcaplan / detail
  394. unit tests ready to go — arthuang / detail
  395. Adding 4D Legendre basis for Adapt4D + error estimates. — cfrontin / detail
  396. cmake addition of 4d legendre... still not finished though. — cfrontin / detail
  397. oops — cfrontin / detail
  398. don't use Philip's split for now — arthuang / detail
  399. add nb for output correction — arthuang / detail
  400. got rid of a unnecessary sandbox, updated other test — arthuang / detail
  401. One less call to checkGrid for curved LocalPatch — galbramc / detail
  402. More IRS stuff — blsc / detail
  403. moved metric conformity to separate file — pcaplan / detail
  404. tried to assess metric conformity and re-adjust target cost but simpler to just ask the mesher and have inner loop on adaptations to control target cost — pcaplan / detail
  405. pushing to hypersonic — arthuang / detail
  406. some fixes to actually use the volume factor... — pcaplan / detail
  407. new elemental error estimate for CG, not especially tested but seems to be ok — hcarson / detail
  408. more tweaks to cases — hcarson / detail
  409. Add static caching for pentatope quadrature. — cfrontin / detail
  410. Set edge length bound = 1 for 1D — ursachi / detail
  411. Added exponential and maxcubic functions — ursachi / detail
  412. 1D test cases — ursachi / detail
  413. std::stringstream has a surprisingly expensive constructor — galbramc / detail
  414. Fixed formatting — galbramc / detail
  415. Added missing copyright — galbramc / detail
  416. Added missing includes — galbramc / detail
  417. include set — pcaplan / detail
  418. merge — pcaplan / detail
  419. still default to savithru's local split — pcaplan / detail
  420. protect quadrature tests with use_conical — pcaplan / detail
  421. Deleted unnecessary includes — ursachi / detail
  422. changes to make avro grids compile again — hcarson / detail
  423. cleanup and forgotten files — hcarson / detail
  424. Progress towards avro+Wakes. Added intel19 to jenkins env. — galbramc / detail
  425. Quadrature fix. — cfrontin / detail
  426. Added Legendre4D Bases. — cfrontin / detail
  427. Adapt4D ADST should *start*. — cfrontin / detail
  428. Remove files dumped by avro — galbramc / detail
  429. Fixed missing parameter checks — galbramc / detail
  430. New CFL evolution logic (ifdef'd out) — blsc / detail
  431. Missed a file — blsc / detail
  432. Improved speed of XField_LocalPatch — galbramc / detail
  433. Allow longer time for slow test — galbramc / detail
  434. debug CG local patch — pcaplan / detail
  435. Update UniqueTrace to use UniqueElem — galbramc / detail
  436. forgot a multiply — blsc / detail
  437. Added 4D pentatope Legendre unit tests. — cfrontin / detail
  438. Complete Legendre 4D test. — cfrontin / detail
  439. Actually this time. — cfrontin / detail
  440. Universalized legendre max order, refactored variable. — cfrontin / detail
  441. first errormodel additions. — cfrontin / detail
  442. Updating the delta wing case — galbramc / detail
  443. Fixed compile errors — galbramc / detail
  444. reference element tested and ready to fly. — cfrontin / detail
  445. More compile fixes for DeltaWing. avro works again with it. — galbramc / detail
  446. Logic updates for PTC to hypersonic — blsc / detail
  447. Skip blank backtrace numberes. Lots of work towards avro+Wakes — galbramc / detail
  448. Fixed test for lagrange basis function spacetime, moving coords to inherited class from base class. — cfrontin / detail
  449. warning fix, you dumbass\! — cfrontin / detail
  450. Fixed up hashing and added unit tests for UniquElem — galbramc / detail
  451. fixed cross-machine tolerancing issue. — cfrontin / detail
  452. IRS updates — blsc / detail
  453. Lots of fixes for avro+Wakes — galbramc / detail
  454. Don't dump file — galbramc / detail
  455. pre merge — hcarson / detail
  456. Reduce testing in MOESS_Gradation_Optimizer_NLOPT_btest — galbramc / detail
  457. new and improved AGLS formulation — arthuang / detail
  458. premerge — pcaplan / detail
  459. Use operator() to modify avro topologyDup — galbramc / detail
  460. Updated linesearch with missing status variables — blsc / detail
  461. Add backtrace info to singular matrix. Enable VERA_ERROR for all builds with SANS_Commit.sh — galbramc / detail
  462. Quadrature fixes — galbramc / detail
  463. Removed unnecessary line — galbramc / detail
  464. Add vera to CentOS and Rhel. Undo some fixes. — galbramc / detail
  465. Added boost to LD_LIBRARY_PATH on CentOS — galbramc / detail
  466. Guard against negative nodal metrics from ImpliedMetic optimizer — galbramc / detail
  467. Updated avro and refine build to work with .tgz files — galbramc / detail
  468. Updated build of lapack and avro build to use SANS lapack — galbramc / detail
  469. Forgot to remove test hack — galbramc / detail
  470. Fixed mistake in FindLAPACK — galbramc / detail
  471. Add more diagnostics to Jacobian failure with RefCoordSolver — galbramc / detail
  472. More debug info for singular RefCoordSolve — galbramc / detail
  473. Missing include — galbramc / detail
  474. GRRRRRRRRRRRRRRRR CELL GROUP 1 NEEDS  TO BE ADDED TO RESOLVE CELL GROUPS FOR CG GRRRRRRRRRR (╯°□°)╯︵ ┻━┻ — pcaplan / detail
  475. got rid of hackery — pcaplan / detail
  476. extra space — pcaplan / detail
  477. Working towards scale invariant DenseLinAlg solves — galbramc / detail
  478. line unit test should really allow edge split since its the same as an iso split, vera fixes too — pcaplan / detail
  479. cleanup of unused debugging stuff...what a colossal waste of time — pcaplan / detail
  480. trailing whitespace — pcaplan / detail
  481. Update vera to remove scripts when warn/error is changed. Add limits inlcude where numeric_limits is used. — galbramc / detail
  482. reverting to new AGLS formulation — arthuang / detail
  483. reverting to not use Philip's split to get thru Jenkins — arthuang / detail
  484. silence warning — pcaplan / detail
  485. Updates to CMake files — savithru / detail
  486. Fix quadrature memory leak again — galbramc / detail
  487. trying to solve pivot problem... not yet though. — cfrontin / detail
  488. added assert grid. Wraps check grid in a try-catch and return true if it passes. Can use in places where checkGrid can be removed in Release mode — hcarson / detail
  489. pre merge — hcarson / detail
  490. Updates so avro+Wake appears to be working — galbramc / detail
  491. fixed ReferenceElement constraint jacobian assignment ya dingus. — cfrontin / detail
  492. fixed ReferenceElement constraint jacobian assignment ya dingus, pt. II: unit testing boogaloo — cfrontin / detail
  493. Removed pivoting change that was dumb anyway. — cfrontin / detail
  494. Combined into one file — ursachi / detail
  495. sandbox updates — arthuang / detail
  496. moving towards rans adaptive cg — arthuang / detail
  497. RANS test case working — arthuang / detail
  498. rans joukowski working for real? — arthuang / detail
  499. Fixed link errors — galbramc / detail
  500. More fixes for avro+Wake. Needs some more checks. — galbramc / detail
  501. Forgot files — galbramc / detail
  502. Fixed compile error — galbramc / detail
  503. Split up the Adaptation library by dimension — galbramc / detail
  504. Compile error fix — galbramc / detail
  505. Fix link errors — galbramc / detail
  506. Another link error — galbramc / detail
  507. Migrated single boundary layer scalarfunction from 4D to 3D+T — cfrontin / detail
  508. Remove debug files — galbramc / detail
  509. Don't run avro with wakes due to failing debug dumps in avro — galbramc / detail
  510. Split avro Wake edges that span the entire wake — galbramc / detail
  511. Trying to split segments on wakes, but I need help... — galbramc / detail
  512. Fail depends tests if files are generated — galbramc / detail
  513. Reworking MOESS to use Field_CG — galbramc / detail
  514. revert away from Philip's local split — arthuang / detail
  515. update error estimate unit test — arthuang / detail
  516. unused variable — arthuang / detail
  517. added gravity to 2D two phase case — ericdow / detail
  518. New parameters for new EPIC 10.3 executable — galbramc / detail
  519. More reworking of MOESS — galbramc / detail
  520. More cleaning of MOESS — galbramc / detail
  521. Fix ccache path for SANS_Depend tests — galbramc / detail
  522. Another script fix for depends — galbramc / detail
  523. catch invalid split for high-order — pcaplan / detail
  524. Lots more work towards refactored MOESS — galbramc / detail
  525. More work on MOESS — galbramc / detail
  526. updated ADST cases. — cfrontin / detail
  527. MOESS refactoring to use fields seems to be done. — galbramc / detail
  528. Fixed includes — galbramc / detail
  529. Fixed parallel print statement — galbramc / detail
  530. SANS optimizer was using wrong initial step matric. — galbramc / detail
  531. Fixed bug in edge length deviation — galbramc / detail
  532. Minor fixes — galbramc / detail
  533. More ping tests — galbramc / detail
  534. Split up ProjectGlobalField — galbramc / detail
  535. Asymmetric cost schedule — galbramc / detail
  536. CMake updates — galbramc / detail
  537. continued working on debugging two phase gravity fluxes — ericdow / detail
  538. TAO implied metric calculation works in parallel — galbramc / detail
  539. Fix typo — galbramc / detail
  540. Remove mesh_0.json from tests with avro — galbramc / detail
  541. More work towards parallel MOESS with TAO — galbramc / detail
  542. Some compile fixes — galbramc / detail
  543. Synchronize error models in ghost/zombie cells — galbramc / detail
  544. Parallel MOESS is very close — galbramc / detail
  545. Link error fixes — galbramc / detail
  546. Some small fixes — galbramc / detail
  547. working out RANS stabilization terms — arthuang / detail
  548. pre merge — hcarson / detail
  549. Stole MMA from NLopt to parallelize with TAO. — galbramc / detail
  550. Added paralel serial equivalence test for MOESS TAO-MMA — galbramc / detail
  551. If I TAO+MMA does not wory, try MMA+MPI — galbramc / detail
  552. oliver test is running, not getting right rates yet — arthuang / detail
  553. Added artificial viscosity to tilted reservoir test case — savithru / detail
  554. version used in the git bisect — hcarson / detail
  555. refactored stabilized CG — arthuang / detail
  556. more robust quadrature tests, shouldn't have issues with quadrature caching. — cfrontin / detail
  557. push to laptop in the middle of updating RANSSA — arthuang / detail
  558. missing term for adjoint in RANSSA.. needs unit testing — arthuang / detail
  559. rans sourcegradientjacobiangradient thoroughly unit tested — arthuang / detail
  560. Added pressure integral output for two-phase. Modified tilted reservoir test-case. — savithru / detail
  561. Parallel MMA algorithm! — galbramc / detail
  562. Forgot the unit test — galbramc / detail
  563. and the actual files — galbramc / detail
  564. more forgotten files — galbramc / detail
  565. Some vera fixes — galbramc / detail
  566. took out demote surreal — arthuang / detail
  567. unit tests updated for stabilized integrand — arthuang / detail
  568. changes to error model to use order scaling in the regularization — hcarson / detail
  569. A number of fixes for parallel MOESS — galbramc / detail
  570. copyright notice fix — hcarson / detail
  571. fixing a function that got mangled somehow/sometime — hcarson / detail
  572. license error — hcarson / detail
  573. Updated ErrorModel_Element unit test — galbramc / detail
  574. Fixed warning and relaxed tolerance — galbramc / detail
  575. More minor fixes — galbramc / detail
  576. Added another derivative of St option — galbramc / detail
  577. Really really relaxed tolerance for Parallel/Serial equivalence for TAO with Intel... not sure whats up with that... — galbramc / detail
  578. updates to strongform integrand — arthuang / detail
  579. added needed hooks to 3D for stabilized CG — arthuang / detail
  580. Updated unit tests and whatno — blsc / detail
  581. Nightly fixes — galbramc / detail
  582. Trying to improve the speed of XField_Lagrange — galbramc / detail
  583. add RANS ndconvert omterface — arthuang / detail
  584. fixed up RANS asymptotic — arthuang / detail
  585. added trace on scalar, bug in new source fcn in 3d — arthuang / detail
  586. fixed unit test, mod source — arthuang / detail
  587. new adjoint analytic function for 1D BL — arthuang / detail
  588. added needed hooks for AV, implementation will be needed — arthuang / detail
  589. getting unit tests to pass — arthuang / detail
  590. working on RANS... — arthuang / detail
  591. relax tol on unit test — arthuang / detail
  592. truly linear adjoint — arthuang / detail
  593. caught some bugs, put in unit tests — arthuang / detail
  594. pre merge — hcarson / detail
  595. Quadrature fix on AD3DST. — cfrontin / detail
  596. AD4DST refactor. — cfrontin / detail
  597. orthodoxy is unconsciousness. — cfrontin / detail
  598. quadrature fixes — cfrontin / detail
  599. New unit tests and other updates — blsc / detail
  600. Moving stuff to hypersonic — blsc / detail
  601. More to hypersonic — blsc / detail
  602. AD4D update. — cfrontin / detail
  603. Fixed some analyzer warnings — galbramc / detail
  604. One more analyzer suppression — galbramc / detail
  605. Some MPI cleanup — galbramc / detail
  606. target dof factor — pcaplan / detail
  607. always forget to switch local split — pcaplan / detail
  608. horizontal tab — pcaplan / detail
  609. wake tests were originally off — pcaplan / detail
  610. Finalized moving nDOFpossessed to Field — galbramc / detail
  611. Added missing include — galbramc / detail
  612. settings for Marshall to run — hcarson / detail
  613. Fixed a bug in PTC residual indexing — shunz / detail
  614. Add debug information for MassMatrix singular matrix errors — galbramc / detail
  615. fixes to mesh adapt — hcarson / detail
  616. Missing include — galbramc / detail
  617. Enabled daisy chain in algebraic equation set class for PTC.  Refactored (and hopefully clarified) calculation of pseudo-transient contributions to residuals and jacobians — shunz / detail
  618. Fixed a bug in PTC AES's cell group integration calls, and a bug in residualPseudoTemporal daisy-chain call — shunz / detail
  619. Enabled PTC for coupled IBL of 4x4 block system — shunz / detail
  620. Updated unit test — shunz / detail
  621. CG RANS is looking more promising... — arthuang / detail
  622. loops in rans joukowski — arthuang / detail
  623. One more missing include — galbramc / detail
  624. fixes for jenkins — hcarson / detail
  625. fixed excessively small initial case... now starting from predicted uniform box size. — cfrontin / detail
  626. Added solve4d smart dof case. — cfrontin / detail
  627. added hooks for BICGStab — arthuang / detail
  628. Speed improvements for UniqueElem and XField_Lagrange — galbramc / detail
  629. Purged matrix manipulation Nishida hack — galbramc / detail
  630. fixed test to match ErrorModel_Elemental.h — hcarson / detail
  631. One move too many — galbramc / detail
  632. playing around with stabilization — arthuang / detail
  633. RANS with scaling — arthuang / detail
  634. Fix for jenkins parallel make — galbramc / detail
  635. Updates to porous media PDEs: added gravity to 2D two-phase, added pressure output functional — savithru / detail
  636. Vera fixes — savithru / detail
  637. Fixed copyright notice — savithru / detail
  638. One more fix.. — savithru / detail
  639. Fix uninitialized value — savithru / detail
  640. Some cleanup in PTC — shunz / detail
  641. Fixed a bug in PTC daisy chain implementation: previously, past solution and time step field was not properly updated for daisy-chained equations — shunz / detail
  642. reapply quadorder fix. — cfrontin / detail
  643. Fix for singular matrix detection. Only guard against 1/0. — galbramc / detail
  644. modified some scalar functions — pcaplan / detail
  645. Separating out LAPACK from LAPACKE — galbramc / detail
  646. Fixes for LAPACK interface — galbramc / detail
  647. Forgot to switch back a change — galbramc / detail
  648. Only test with LAPACKE on reynolds — galbramc / detail
  649. Don't show LAPACKE as an option on OSX — galbramc / detail
  650. Minor fix — galbramc / detail
  651. Include MKL in coverge testing — galbramc / detail
  652. Source intel for coverage — galbramc / detail
  653. Fixes for checking LAPACK — galbramc / detail
  654. Automatic checking of all lapack functions used by SANS — galbramc / detail
  655. Some small fixes — galbramc / detail
  656. Relax tolerance a bit more for intel — galbramc / detail
  657. Added maximum rate matrix output — galbramc / detail
  658. updated i/o on 4d cases. — cfrontin / detail
  659. New files for Adjoint consistent potential — galbramc / detail
  660. Cleanup trace matrix print — galbramc / detail
  661. Forgot a file — galbramc / detail
  662. working on RANS — arthuang / detail
  663. Fixes for latest refine — galbramc / detail
  664. agls formulation looks better? — arthuang / detail
  665. modified RANS tests — arthuang / detail
  666. pre merge — hcarson / detail
  667. typo denomerator to denominator — hcarson / detail
  668. caught an indexing bug with interior trace groups — hcarson / detail
  669. some tweaks as was retesting using elemental estimates. They still don't work (phew....) — hcarson / detail
  670. changed the Galerkin DoubleBL case to match up with the DG one — hcarson / detail
  671. changed checkGrid() to assert(assertGrid()). This is the same as checkGrid() in debug mode, but gets removed in release — hcarson / detail
  672. bug fixes and clean up — hcarson / detail
  673. undoing the assertGrid, it doesn't work how I thought it did — hcarson / detail
  674. updated io on 2D+T cases. — cfrontin / detail
  675. fixed solve4d i/o — cfrontin / detail
  676. fixes to make the avro grids work in the adapt — hcarson / detail
  677. fixed h approximation, *philip's tableflip emoticon*. — cfrontin / detail
  678. oops. — cfrontin / detail
  679. hooks for modifying order and power and command line — hcarson / detail
  680. fixed dumbass error. — cfrontin / detail
  681. Minor fixes per intel guide. Fix avro+wake. — galbramc / detail
  682. still working on RANS... — arthuang / detail
  683. Some fixes for BLAS and turn off one Wake test — galbramc / detail
  684. adding new parmafield builders — arthuang / detail
  685. Forgot file dump — galbramc / detail
  686. Updated EPIC interface — galbramc / detail
  687. distance function gradient working — arthuang / detail
  688. hack for sourcegradient compiles — arthuang / detail
  689. unitialized warnings from jenkins — hcarson / detail
  690. tweak for hypersonic — hcarson / detail
  691. found a bug in RANS source gradients — arthuang / detail
  692. this one not that one — arthuang / detail
  693. deprecated ElementDual local patch. Everyone can use Element now, and it should throw an exception if you run with ElementDual — hcarson / detail
  694. added the spaceType to the dummy problems — hcarson / detail
  695. sigh. forgot they need override — hcarson / detail
  696. maaaaaan — hcarson / detail
  697. sigh — hcarson / detail
  698. Fix for PETSc 3.11 — galbramc / detail
  699. moved the all_reduce inside the #define of Boundary Outputs. The FunctionalCell_Galerkin already includes an all_reduce — hcarson / detail
  700. Setup for Mike Park to test metric calculations — galbramc / detail
  701. commiting the new error model and the two double boundary layer cases to run on hypersonic — hcarson / detail
  702. Fix nightly clang warning — galbramc / detail
  703. typos and a small test for the DOF Map, didn't catch anything... — hcarson / detail
  704. playing with formulations, added source to BC — arthuang / detail
  705. getting closer — arthuang / detail
  706. SA wake test case — arthuang / detail
  707. minor edits to rans, unit tests — arthuang / detail
  708. better singular perturbation boundary layer case — pcaplan / detail
  709. i think the stabilization is sound... — arthuang / detail
  710. hugh's suggestion for a dimension-independent error model — pcaplan / detail
  711. Added case to adaptND_mesh_optimizer_toy to easily generate unstructured uniform grids. — cfrontin / detail
  712. SolveND_DGBR2_AD_ST_toy for 3D and 4D now have grid loading capability, but it's ifdeffed out for now. — cfrontin / detail
  713. fixed #define — cfrontin / detail
  714. start from DG grids — arthuang / detail
  715. more tinkering with RANS — arthuang / detail
  716. Some updates for a few things I' — blsc / detail
  717. nitsche param now includes source term — arthuang / detail
  718. Added 2D+T CG unstabilized advection diffusion mechanics. — cfrontin / detail
  719. added an integrand for estimating the square of the L2 error locally — hcarson / detail
  720. locked the TopoDim template to the Topology::TopoDim template. We should not be templating on both here, these should be removed — hcarson / detail
  721. added some integral tests — hcarson / detail
  722. A class for computing L2 error estimates, either nodally or elementally — hcarson / detail
  723. Reduced ErrorOrder_4D_DG_Pentatope_btest max grid size to reduce runtime — galbramc / detail
  724. Fixed uninitialized data with intel — galbramc / detail
  725. removed TopoDim from the for_each_XXX functions. Also added Topology::CellTopoDim, which gives the dimension of the topology for which Topology was a trace. — hcarson / detail
  726. Also made a GalerkinLib in the process of splitting out the local solve machinery for CG to use in the L2 proction solver — hcarson / detail
  727. fixing up unit tests to match new indicator calculation. Also changing mitState Nitsche to use the p independent lengthL. Will then need to choose constants properly some other way. — hcarson / detail
  728. A Nodal error estimate order test — hcarson / detail
  729. refactor into explicit instantiations and added GalerkinLib to a CMakeLists.txt I forgot — hcarson / detail
  730. more instantiations and fix a bug — hcarson / detail
  731. moving towards a CG L2 local projection. — hcarson / detail
  732. updating error estimate order tests. DG now uses the mitState BC, the CG one does not as it can't achieve the rates. There must be an instability in the adjoint.... — hcarson / detail
  733. Use CG local patch bcs for the local solve — hcarson / detail
  734. actually added the declaration to the header... — hcarson / detail
  735. Added a re-roll of the c++-14 make_unique feature — hcarson / detail
  736. Added a re-roll of the c++-14 make_unique feature — hcarson / detail
  737. first use of make_unique. — hcarson / detail
  738. ErrorEstimateL2 should now handle p0 or p1 estimation gracefully, and also actually handled that stupid merge conflict — hcarson / detail
  739. Fixed many clang analyzer complaints — galbramc / detail
  740. new MDG directory — arthuang / detail
  741. MDG integrand cell unit test passing — arthuang / detail
  742. changed name of test and added the notebook that generated the L2 error integrand tests — hcarson / detail
  743. forgot an mpi include — hcarson / detail
  744. all_reduce only works on POD not the KahanSum — hcarson / detail
  745. some tweaks — hcarson / detail
  746. interior trace w/ 1d unit test — arthuang / detail
  747. missed a bracket in the merge — arthuang / detail
  748. unit test to ensure boundary coordinates of 4d meshes are correct since these are frequently used in sandbox tests...and they are correct... — pcaplan / detail
  749. jacobian ping test added for cell,trace — arthuang / detail
  750. forgot to turn CG LG trace back on — hcarson / detail
  751. added CG sandbox for AD 2D+T problem. — cfrontin / detail
  752. Fixed more analyzer warningw — galbramc / detail
  753. fixed for push, incorporated hugh's mistakenly included preprocessor define. — cfrontin / detail
  754. more hugh fixes plus trueoutput fixes. — cfrontin / detail
  755. SolverInterfaceL2 project actually uses the correct local patch for CG now — hcarson / detail
  756. JEEEEENNNNKIONNNNSSSSS — cfrontin / detail
  757. added SA nitsche — arthuang / detail
  758. jacobian and residual unit tests passing — arthuang / detail
  759. Fixed typo — galbramc / detail
  760. jenkins punched me in the face *again*. — cfrontin / detail
  761. MDG solve works.. needs debugging — arthuang / detail
  762. grumble — cfrontin / detail
  763. VOLUME_WEIGHTED crept through on those last commits. It shouldn't have and this fixes that — hcarson / detail
  764. why oh why did i not save the fixes last time — cfrontin / detail
  765. preprocessor sandbox troubles. — cfrontin / detail
  766. dumb preprocessor stuff fix. — cfrontin / detail
  767. bad include habits fixed. — cfrontin / detail
  768. MDG solves! optimal rates! — arthuang / detail
  769. warning fix. — cfrontin / detail
  770. moved some includes into the cpps — hcarson / detail
  771. removed PrimalNeighbors and added in Vertex — hcarson / detail
  772. Created Vertex Local grid. Have the four cpp, but only Area is actually declared, others would have link errors. Also a super basic unsplit test — hcarson / detail
  773. getting closer to everything compiling — arthuang / detail
  774. moved jacobian calculations into output integrands for Galerkin. bunch of stuff still not working — arthuang / detail
  775. getting closer to passing unit tests.. — arthuang / detail
  776. unit tests updated — arthuang / detail
  777. unit test/compile fixes — arthuang / detail
  778. indentation warning — arthuang / detail
  779. last final last warning bother. — cfrontin / detail
  780. tidying solve3d_CG_AD_ST_toy — cfrontin / detail
  781. Added vertexMode to Local patch, and edgeMap constructor to LocalBase — hcarson / detail
  782. removed the vertex local specialist patch. It might eventually be faster, but the development time would be much much slower — hcarson / detail
  783. MDG jacobianfunctional in place, solves are compiling — arthuang / detail
  784. 3D+T pde stuff should be good to go. — cfrontin / detail
  785. made the central vertex always dof 0. Also added flag for whether patch comes from splitting an edge attached to the vertex — hcarson / detail
  786. MDG compiles fine but doesn't stabilize in advective limit. Hmm... — arthuang / detail
  787. forgot to include a PrimalNeighbors rename — hcarson / detail
  788. MDG working well again.. we have to figure out the Nitsche BCs — arthuang / detail
  789. Some of the updates from hypersonic before merging — blsc / detail
  790. change cb back to 2 to pass Jenkins — arthuang / detail
  791. 2D error order compiling — arthuang / detail
  792. add function hooks to 3DST — arthuang / detail
  793. added function hooks for 1d, 2d spacetime — arthuang / detail
  794. fieldweighted cell integrand for MDG — arthuang / detail
  795. Fix some issues that came up during debug build — blsc / detail
  796. added fieldweighted for MDG trace integrand — arthuang / detail
  797. More clang analyzer warning fixes. — galbramc / detail
  798. more needed function hooks — arthuang / detail
  799. change to isothermal wall BCs, push to hypersonic — arthuang / detail
  800. ughhhhhh more ndconvert troubles — arthuang / detail
  801. add isothermal to RANs BCs — arthuang / detail
  802. working towards the nodal model. Moving to laptop — hcarson / detail
  803. working towards local indicator — hcarson / detail
  804. added the Simplex meta class — hcarson / detail
  805. moving to lab box — hcarson / detail
  806. removed unused typedef — arthuang / detail
  807. Nightly fixes — galbramc / detail
  808. fixed mdg unit tests — arthuang / detail
  809. Propogating changed from develop — blsc / detail
  810. Nightly fixes — galbramc / detail
  811. reordered MDG jac, added error estimate cell — arthuang / detail
  812. merge conflict — hcarson / detail
  813. RANS cases working pretty well, pushing to hypersonic — arthuang / detail
  814. mdg error estimates in place — arthuang / detail
  815. took out adjointState functions (mostly) — arthuang / detail
  816. completed sourceJacobianHACK change. MDG adjoints not quite working... — arthuang / detail
  817. Think I've got all the updates from hypersonic — blsc / detail
  818. 4d cg fields starting up... — cfrontin / detail
  819. error estimate unit test passing, but sandbox case is off... — arthuang / detail
  820. mdg error estimates working! — arthuang / detail
  821. typo — arthuang / detail
  822. cleanup — arthuang / detail
  823. moved into the SANS namespace — hcarson / detail
  824. removed Topology template, used Simplex<TopoDim> instead — hcarson / detail
  825. fixed hack interface — arthuang / detail
  826. added sub-cell step matrix accessor with 1D and 2D unit tests — hcarson / detail
  827. added unit testing for 3D RANS fncs, other cleanup — arthuang / detail
  828. forgot a file — arthuang / detail
  829. sandbox edits — arthuang / detail
  830. complaining about includes? — arthuang / detail
  831. unused variables.. push to tucano for memcheck — arthuang / detail
  832. unit test name change — arthuang / detail
  833. missing definition — arthuang / detail
  834. trying to fix segfault — arthuang / detail
  835. fixed the warning, but there's a segfault somewhere in edgelocal3d... — arthuang / detail
  836. wow that was really dumb but took 4 hours to find — arthuang / detail
  837. putting Nitsche into stabilization object.. stil lin process — arthuang / detail
  838. premerge — arthuang / detail
  839. most things compiling... — arthuang / detail
  840. added affine invariant implied metric calculation — hcarson / detail
  841. nitsche parameter change complete.. things seem to compile ok — arthuang / detail
  842. member variables out of order — arthuang / detail
  843. Added unit tests for gravity term in PDETwoPhase2D + some cleanup — savithru / detail
  844. tweaks to get MDG working for systems — arthuang / detail
  845. fixed checks for parallel — arthuang / detail
  846. whoops switched back — arthuang / detail
  847. hopefully more correct for parallel? — arthuang / detail
  848. Nightly fixes — galbramc / detail
  849. Another nightly fix — galbramc / detail
  850. More nightly fixes — galbramc / detail
  851. Another nightly fix — galbramc / detail
  852. big refactor of the edge solve. Removed the cell group business, and now builds nodal models from the data of the edge solves. No testing quite yet, but it compiles! — hcarson / detail
  853. on the way to 4d-ification of CG... — cfrontin / detail
  854. Hopefully last warning fix — galbramc / detail
  855. more of the same... — cfrontin / detail
  856. minor edits that shouldn't affect anything — arthuang / detail
  857. Merge conflict resolution and formatting issues — blsc / detail
  858. added a cell->node map to the nodalview. Also fixed a bug with edge local not correctly identifying that a node can be common to both vertices without sharing a cell with the edge. Basically a real niche case — hcarson / detail
  859. added hashing function for GroupElemIndex. Uses boost::hash. Can now use unordered_set and unordered_map on GroupElemIndex. Should be faster in those cases where we don't need orderedness, only unique — hcarson / detail
  860. tiny tweaks. uses linspace — hcarson / detail
  861. tweaks to the affInv implied metric option. Also forgot to add the #if for reference step calc — hcarson / detail
  862. added some commented code for inspecting eigenvalues for a 2x2 system. Useful for debugging — hcarson / detail
  863. MDG with discontinuous efld.. does better! — arthuang / detail
  864. working towards error estimate from fine scale — arthuang / detail
  865. minor change to AGLS — arthuang / detail
  866. missed a function update — arthuang / detail
  867. push to hypersonic — arthuang / detail
  868. push to hypersonic — arthuang / detail
  869. few changes to MDG output — arthuang / detail
  870. mdg rans sandbox compiling — arthuang / detail
  871. extra args for output — arthuang / detail
  872. print resid bug fix — arthuang / detail
  873. MDG qp should initialize to zero — arthuang / detail
  874. Commented out some stuff (with developer exceptions), will have to go back to that code — blsc / detail
  875. Updated tolerances — blsc / detail
  876. Removed unused variables — blsc / detail
  877. add nitsche to mdg traces — arthuang / detail
  878. towards p= 1+ 3D+T AD... — cfrontin / detail
  879. update mdg solutiondata constructor — arthuang / detail
  880. experimenting w upwind bcs — arthuang / detail
  881. compiling — arthuang / detail
  882. moving to hypersonic — hcarson / detail
  883. Formatting fixes — blsc / detail
  884. experimenting with distance fcn gradients again — arthuang / detail
  885. fixing some bugs and moving to hypersonic — hcarson / detail
  886. another flag to turn off the metric dumping — hcarson / detail
  887. More vera warnings — blsc / detail
  888. separated Nitsche order and stabilization order — arthuang / detail
  889. Fixed unit test bug — blsc / detail
  890. changed FrobNormSq formula for MatrixSymS to exploit the symmetry — hcarson / detail
  891. added an inner product for VectorS. Can also handle a range of weighted inner products, with MatrixS, MatrixSymS and a diagonal — hcarson / detail
  892. added some instantiations, also started using the InnerProduct function directly — hcarson / detail
  893. dgbr2 joukowski w solver interfaces — arthuang / detail
  894. added some 3D+T CG stuff ... work in progress... added 1D+T AD for learning syntax, added a lot of comments. — cfrontin / detail
  895. changed to 1 pt quadrature implied metric calculation. — hcarson / detail
  896. added mean, min, max quality calculator and output in the NLOPT output — hcarson / detail
  897. linked the use of the modified model to the use of the SANS optimizer. No longer compile time flag — hcarson / detail
  898. removed VOLUME_WEIGHTED and added FULL_NODAL. This compile time flag needs to be set to run in the nodal view of the world. Long term this will be the way to go, but it only works in serial presently, so leaving it disabled by default — hcarson / detail
  899. forgot to fix the mpi bit — hcarson / detail
  900. apparently boost::mpi needs its own special minimum and maximum functions... — hcarson / detail
  901. shortened the file by removing unneeded commenting and dead space — hcarson / detail
  902. missing 4d instantiation and an attempt at removing the compiler error. At least I compiled gnu5 and couldn't recreate it... — hcarson / detail
  903. maybe this works? — hcarson / detail
  904. forgot that we can't actually dump 4d grids... — hcarson / detail
  905. changed the exception to a warning — hcarson / detail
  906. forgot to rename them edge tests — hcarson / detail
  907. sigh — hcarson / detail
  908. manually return group and elem to make intel happy. Also reduced the number of shuffles to 3 in the implied test — hcarson / detail
  909. changed the tolerances a little, should now be able to do more shuffles — hcarson / detail
  910. changed the initial condition for the optimization to Log Euclidean. Had a case where affine invariant failed the non-linear solve, so lets just skip that — hcarson / detail
  911. Increasing coverage — blsc / detail
  912. only doing 1 shuffle in 3D because the bloody coverage takes too long — hcarson / detail
  913. I swear... — hcarson / detail
  914. using the max in the implied calculation. The optimization is so much easier/faster — hcarson / detail
  915. added a 3d corner singularity and also made the 3D L2 adapt flag based — hcarson / detail
  916. tweaks to try speed this damn thing up and get it through jenkins — hcarson / detail
  917. correct beta val — hcarson / detail
  918. added more iterations to the AffInv calc, and use the FrobNorm from DLA — hcarson / detail
  919. save the last mesh, explicitly 2D folder, and Affine Invariant metric calculation — hcarson / detail
  920. added the objective of maximizing average quality, this is also not a good one, but unsure what to do... — hcarson / detail
  921. changed the range for the loops, so that the lower dof counts can be run serial — hcarson / detail
  922. More coverage — blsc / detail
  923. Nightly fixes — blsc / detail
  924. changed AffInv to throw exception and revert to Log Euclidean. Also raised the tolerance slightly, as the tolerance is done the norm. Thus sqrt(eps) = 1e-8, so setting tol to 1e-7 — hcarson / detail
  925. fixed betas. reset dump Metric to every iteration. changed 3D to dump the final qfld with the same filename — hcarson / detail
  926. use the max det met — hcarson / detail
  927. Cleaned up well models, modified fixed outflow rate well to use a distributed source term, added a new output function for computing bottom-hole pressure of fixed rate wells — savithru / detail
  928. temp patch for 4D grid io — cfrontin / detail
  929. switch to sine^4 exact solution for solve4d cases. — cfrontin / detail
  930. added outerproduct for VectorS — hcarson / detail
  931. Hopefully faster 3D eigen solves — galbramc / detail
  932. Forgot unit tests — galbramc / detail
  933. Added an enum class for adding quality to the implied metric objective, can do maximize or minimize inverse. Also InverseLengthTensor for calculating the metric. Also fixed up the AffineInvariant calculation to use the correct Gradient descent algorithm from Pennec, thus it actually works now. — hcarson / detail
  934. tweaks for cases — hcarson / detail
  935. much reduced the tolerance for the affine invariant calculation. The non-linear optimization is really not that bad, and it is the most theoretically justifiable metric, so we should use it — hcarson / detail
  936. some typo fixes, some documentary additions, some work on 4d CG field structures. CG not working yet for 4D w/ order > 1. needs some DEVEL EXCEPTIONS before push. — cfrontin / detail
  937. hypersonic changes — pcaplan / detail
  938. Added the correct output functional for computing the bottom-hole pressure of a fixed-rate well — savithru / detail
  939. a forgotten rename — hcarson / detail
  940. Fix for new 3D eigen value calculation — galbramc / detail
  941. Relaxed a tolerance — galbramc / detail
  942. debugging hell. — cfrontin / detail
  943. Fix intel leak. Better logic checking for refine. — galbramc / detail
  944. moving to hype — hcarson / detail
  945. Updates to track CAD parameters with avro — galbramc / detail
  946. some comments. Also changed the affine invariant calculation to count the number of unconverged solves, record the maximum norm and also increased the tolerance — hcarson / detail
  947. moving branch — hcarson / detail
  948. stylish stylish jenkins — hcarson / detail
  949. Some fixes for avro. Show implied metric cost. — galbramc / detail
  950. changed the advection direction for the Triple BL. Was displaying low-rank structure (>p+1 convergence), suspect because of fluke with rotational symmetry — hcarson / detail
  951. actually using mpi properly hopefully. Also fixed the test for the affine invariant calc — hcarson / detail
  952. make the print to screen scientific so it's actually informative — hcarson / detail
  953. figured out xfield trace coordinates arent matching their element compadres. added unit tests, still not passing though. — cfrontin / detail
  954. Fixes for avro with full potential — galbramc / detail
  955. Fix typo and warning — galbramc / detail
  956. its an unsigned int not a Real you fool — hcarson / detail
  957. Fixes for CAD parameters with avro in parallel — galbramc / detail
  958. Fixed TraceToCellRefCoord_Pentatope. — cfrontin / detail
  959. 4d xfield trace coordinate ordering bug fixed and re-tested. back to working on cg construction. probably some nefarious stuff in 4d-land that needs to be exceptioned out, but currently only im in that region. — cfrontin / detail
  960. warning fix — cfrontin / detail
  961. remove debugging ifdef switch. — cfrontin / detail
  962. Updated Wake+avro tests with curvature — galbramc / detail
  963. Missed file dump — galbramc / detail
  964. still tryna pass jenkins. added avro switching. — cfrontin / detail
  965. add interfacest to Phil's localpatch to work with Hugh's — arthuang / detail
  966. ffs ifdef SANS_AVRO again — cfrontin / detail
  967. forgot to only report unconverged if actually unconverged — hcarson / detail
  968. fixed tracetocellrefcoord bug side-effects. everything truly broken should have developer exceptions too now. — cfrontin / detail
  969. fixed bug in volume output functional — arthuang / detail
  970. setting the values of beta to those espoused in the proof paper — hcarson / detail
  971. Changed the AD cases to use similar command line interface to the L2 cases. Changed the advection directions to not be aligned with diag. Changed the peclet numbers to be 25 for all cases (unitary advection magnitude), should give reasonable order convergence without wild dof counts. Also changed the exact output calculations to be symbolic, so we can change the advection and diffusion values without having to recalculate — hcarson / detail
  972. added x vs h and x vs AR dumping for the BL case. Doesn't really seem to show very much though, I think Masa was being cheeky — hcarson / detail
  973. Unified and cleaned up output functionals for 2D two-phase. Added unit tests for BHP calculations. — savithru / detail
  974. Changed implied optimization from -Q to 1-Q. Fixes so full potential works with adaptation. — galbramc / detail
  975. Maybe fixed nightly warning — galbramc / detail
  976. Fixed build error — galbramc / detail
  977. Fixed warning — savithru / detail
  978. nightly fix — cfrontin / detail
  979. One more — savithru / detail
  980. A few more compile fixes — galbramc / detail
  981. vera fix 2.0 — cfrontin / detail
  982. VERA FFS A SEMICOLON?! — cfrontin / detail
  983. cleaning up some CG — arthuang / detail
  984. Put CostModel integration order back — galbramc / detail
  985. in the middle of getting CG w lifting operators — arthuang / detail
  986. forgot a file — arthuang / detail
  987. found the bug! — arthuang / detail
  988. CG w BR2 adapts up and running — arthuang / detail
  989. missing something... — arthuang / detail
  990. mod error order tests — arthuang / detail
  991. Added elementEdges function to get runtime edge maps — galbramc / detail
  992. Updates for new avro file layout — galbramc / detail
  993. Fix for clang — galbramc / detail
  994. Fixes for g++-9 — galbramc / detail
  995. Removed the avro instance — galbramc / detail
  996. Fix weekly clang compile error — galbramc / detail
  997. Fixed weekly memory leaks — galbramc / detail
  998. moving back towards MDG stuffs — arthuang / detail
  999. forgot a file — arthuang / detail
  1000. copyright vera error — arthuang / detail
  1001. got rid of whitespace — arthuang / detail
  1002. making things consistent for Nitsche, MDG — arthuang / detail
  1003. got rid of avro include — arthuang / detail
  1004. missed a update on nitsche — arthuang / detail
  1005. fixedu nit test — arthuang / detail
  1006. update error order test — arthuang / detail
  1007. Added ksabo@mit.edu to DeveloperEmailAddresses — ksabo / detail
  1008. relax tol for intel — arthuang / detail
  1009. vera fix — pcaplan / detail
  1010. more vera fixes.. — pcaplan / detail
  1011. avro interface fixes.. — pcaplan / detail
  1012. curly braces... — pcaplan / detail
  1013. curly braces again... — pcaplan / detail
  1014. whitespace + tab — pcaplan / detail
  1015. more vera fixes................. — pcaplan / detail
  1016. ckf vera fixes — pcaplan / detail
  1017. merge of ckf test — pcaplan / detail
  1018. whether dummy or input mesh, result is the same — pcaplan / detail
  1019. updated tolerances for unit tests — ksabo / detail
  1020. explicit constructor for nightly — pcaplan / detail
  1021. More zombies for Edge local solves — galbramc / detail
  1022. Updated valgrind version — galbramc / detail
  1023. Fixed array out of bound — galbramc / detail
  1024. refine did nothing! — galbramc / detail

#239 (Jun 22, 2019, 1:52:10 AM)

  1. 24Ptope working, passing checkGrids(). test in progress. — cfrontin / detail
  2. remove duplicate unit grids in favour of handmade ones — pcaplan / detail
  3. warning fix — pcaplan / detail
  4. warning fix — pcaplan / detail
  5. 24Ptope unit grid working, tested and working. — cfrontin / detail
  6. commit so it ought to run for ben? — hcarson / detail
  7. Add duration to each build in Jenkins email. — galbramc / detail
  8. tweaks and the forcing — hcarson / detail
  9. full rank diffusive stabilizaiton — arthuang / detail
  10. actually making it not work — hcarson / detail
  11. changed the try catch for implied metric optimization to doing nothing rather than excepting. Also tweaks to MCMC file — hcarson / detail
  12. tweaks and removed a bunch of heap memory allocations — hcarson / detail
  13. added options to the quadratic — hcarson / detail
  14. more mods to projection stabilization — arthuang / detail
  15. undoing a lot of sketchy things — arthuang / detail
  16. rolling back more sketchy stuff — arthuang / detail
  17. mods for running with avro — hcarson / detail
  18. comment typos — hcarson / detail
  19. switching over to avro — hcarson / detail
  20. everything compiles, gotta track down unit tests — arthuang / detail
  21. getting unit tests to pass — arthuang / detail
  22. Reworked build of parmetis. refine uses parmetis. added avro build. — galbramc / detail
  23. minor edits to edge local unit tests — arthuang / detail
  24. Fixes for avro and refine — galbramc / detail
  25. Suppress warning — galbramc / detail
  26. Parallel Field4D test fixes. Give refine more time. — galbramc / detail
  27. Relaxed tolerance for intel — galbramc / detail
  28. Don't run ErrorOrder_4D in parallel — galbramc / detail
  29. Updated refine build — galbramc / detail
  30. Updated refine check — galbramc / detail
  31. Nightly build fixes... plus a stopgap ifdef until the SVDless 4D normal vector is done. — cfrontin / detail
  32. Reduce run time of 4D error order check — galbramc / detail
  33. Relaxed another tolerance — galbramc / detail
  34. trying out some edge stabilization — arthuang / detail
  35. MCMC things and got the temp sensors working — hcarson / detail
  36. Remove files written by avro — galbramc / detail
  37. Dissable refine testing for now — galbramc / detail
  38. Added memcheck to parmetis build — galbramc / detail
  39. Ignore external parmetis — galbramc / detail
  40. added hessian to interior trace — arthuang / detail
  41. edge stabilization working-ish? — arthuang / detail
  42. changing branch — hcarson / detail
  43. MC for running on hypersonic — hcarson / detail
  44. ready for running on hypersonic — hcarson / detail
  45. Generalized valgrind suppression — galbramc / detail
  46. moving to hypersonic again — hcarson / detail
  47. egads coords must have 3 dimensions even in 2d — pcaplan / detail
  48. the final files from the project — hcarson / detail
  49. forgot a function — hcarson / detail
  50. pushing to tucano — arthuang / detail
  51. Suppressed CMakeLists errors. [TBD] — shunz / detail
  52. Fixed panel metod tests — shunz / detail
  53. AFLR4 updates and some Jenkins scripts — galbramc / detail
  54. Link tetgen before avro — galbramc / detail
  55. instantation of elementlocal version of local splits for 4d...unit test will fail because the result is different than savi's convention — pcaplan / detail
  56. missing definitions for elementlocal & edgelocal — pcaplan / detail
  57. some instantiations of savi's method for doing local splits — pcaplan / detail
  58. xfield_lagrange method of doing local splits...still debugging...will fix later... — pcaplan / detail
  59. Refactoring.  Patched unit tests — shunz / detail
  60. More unit tests — shunz / detail
  61. added unit tests — shunz / detail
  62. Fixed unit tests — shunz / detail
  63. Fixed IBL unit tests — shunz / detail
  64. Added unit test.  Turned off unused methods. — shunz / detail
  65. Fixed a bug in CMakeLists: use of out-of-scope variable — shunz / detail
  66. Fixed a bug in cmake files that only appear when building with Xcode — shunz / detail
  67. Refactored ping test input array type.  Fixed IBL-related 4x4 block system ping tests.  Added missing MPI-related method definitions for pure virtural methods — shunz / detail
  68. Relocated code into SANS_MPI macros; otherwise, errors are raised about "member access to incomplete type" — shunz / detail
  69. Verified/fixed/cleaned IBL system tests with transition (full upwind). — shunz / detail
  70. Fixed duplicate naming of boost test suite — shunz / detail
  71. Relaxed pyrite tolerance — shunz / detail
  72. Updated forced-transition pyrite files after the bug fix in commit b30121ee5531d91e84aac94fbdab6462f458f4f8 — shunz / detail
  73. Turned off file dump — shunz / detail
  74. Fixed formatting — shunz / detail
  75. Fixed empty traling line — shunz / detail
  76. Fixed DG and HDG AES tests for uncoupled IBL — shunz / detail
  77. Fixed formatting — shunz / detail
  78. Reverted changes to (viscous) HDG stuff: those abandoned changes treated qfld and afld as a single bundle field — shunz / detail
  79. Update AlgebraicEquationSet_HDGAdvective_Advection_btest.cpp — shunz / detail
  80. Fixed one more test affected by ping test refactoring.  Fixed formatting and screen output — shunz / detail
  81. Fixed another system test affected by IBL Qauxv interpreter refactoring — shunz / detail
  82. Update ErrorOrder_1D_HDGAdvective_Advection_btest.cpp — shunz / detail
  83. Fixed warning and missing instantiation — shunz / detail
  84. Added an instantiation just for completeness, although it is no longer used — shunz / detail
  85. moving towards adjoint GLS — arthuang / detail
  86. Cleaned sandbox cases — shunz / detail
  87. relaxed tolerances for clang_release — shunz / detail
  88. Suppressed output — shunz / detail
  89. Fixed bugs in CMakeLists — shunz / detail
  90. Fixed HDG advection tests — shunz / detail
  91. Removed the pure advection test case using (viscous) HDG machinery — shunz / detail
  92. parallel outputs in galerkin solver interface, AGLS error estimation fixed? — arthuang / detail
  93. Refactored halving line search and fixed unit tests — shunz / detail
  94. Fixed memory errors — shunz / detail
  95. Relaxed tolerance for intel — shunz / detail
  96. relaxed tolerances for intel18 — shunz / detail
  97. Relaxed timeout limits — shunz / detail
  98. Speed up unit tests in response to Jenkins timeout — shunz / detail
  99. Fixed typo — shunz / detail
  100. Relaxed tolerance for gnu48 — shunz / detail
  101. Tried to fix timeout on Jenkins testing (coverage_clang reynolds) — shunz / detail
  102. Reverted CMakeLists to see if TIMEOUT is set properly this time on Jenkins — shunz / detail
  103. minor refactoring — shunz / detail
  104. Refactored CMakeLists for Xcode build — shunz / detail
  105. Refactored Newton solver — shunz / detail
  106. Minor fix — shunz / detail
  107. Fixed warnings — shunz / detail
  108. Added IBL max update fraction — shunz / detail
  109. Enabled under-relaxed Newton update for coupled 4x4 block system of IBL with free transition. — shunz / detail
  110. Refactor of avro XField interface — galbramc / detail
  111. Consistent logic for setting cmake testing timout property — galbramc / detail
  112. Fixed refine interface change — galbramc / detail
  113. Fix ifdef when not using avro — galbramc / detail
  114. More fixes to deal with avro — galbramc / detail
  115. Minor cleanup — galbramc / detail
  116. Added unit tests for IBL updateFraction — shunz / detail
  117. Upgrade PETSc — galbramc / detail
  118. More avro and PETSc tweaks — galbramc / detail
  119. I don't understand why dl library is needed to link a static library... — galbramc / detail
  120. Fix for refine check — galbramc / detail
  121. Suppress compiler warning when building PETSc — galbramc / detail
  122. Fix for avro with 4D — galbramc / detail
  123. Enable refine testing again — galbramc / detail
  124. Updated copyright date to 2019 — galbramc / detail
  125. Updated copyright date to 2019 — galbramc / detail
  126. dimension-independent local splits — pcaplan / detail
  127. timing tests show dim-independent implementation on par with savithru's impl...tried to debug hugh's local xfield in primal mode but something is wrong...unit tests on the way — pcaplan / detail
  128. adding stabilized error estimation infrastructure — arthuang / detail
  129. more playing with AGLS — arthuang / detail
  130. minor edits — arthuang / detail
  131. reconciling merge conflicts and some tweaks — hcarson / detail
  132. license updates — hcarson / detail
  133. fixes to match avro — hcarson / detail
  134. forgot to add the avro defined precompile check — hcarson / detail
  135. relaxed tolerances and forgot to split world — hcarson / detail
  136. tweaking tol again... — hcarson / detail
  137. another tweak... — hcarson / detail
  138. cleanup of localpatch + commenting — pcaplan / detail
  139. copyright — pcaplan / detail
  140. more copyright — pcaplan / detail
  141. Updates for MOESS optimizations. Still needs more work. — galbramc / detail
  142. Instantiations for 4D AD solve. — galbramc / detail
  143. A few fixes — galbramc / detail
  144. Compile fixes — galbramc / detail
  145. More instantiations for 4D — galbramc / detail
  146. removed anachronistic definition of primal grid. Primal grid now matches the behavior of the normal DG grids. Unit tests have just been turned off in the meantime — hcarson / detail
  147. make sure mpi is init'd before calling rank by actually running in parallel — pcaplan / detail
  148. revert back to dual — pcaplan / detail
  149. ifdef SANS_AVRO for tests with CKF triangulation — pcaplan / detail
  150. changed to Dual in the system test — hcarson / detail
  151. attempted to fix nightly tests — shunz / detail
  152. Relaxed timings, fixed warning — galbramc / detail
  153. Updated pyrite files to fix nightly tests — shunz / detail
  154. Moved timing test into sandbox — galbramc / detail
  155. Cleanup of refine interface with auto memory management. — galbramc / detail
  156. Modest progress on instantiations. — cfrontin / detail
  157. Fix include — galbramc / detail
  158. 4D box unit grid grandfathered out of XField_KuhnFreudenthal. — cfrontin / detail
  159. added fix to 3D — hcarson / detail
  160. removed the separate 4D file, just added an instantiate at the end of 3D — hcarson / detail
  161. p=7 led to error close to machine zero, which seemed to cause touble to nightly ErrorOrder test.  Cut back p from 7 to 6 — shunz / detail
  162. p=6 still too high for pyrite test for ErrorOrder — shunz / detail
  163. Attempted to warning "use of zero-allocated memory" — shunz / detail
  164. Some cleanup in the sandbox. Added 2D L2Project adaptation — galbramc / detail
  165. Added tecplot dump for metric fields. Other small fixes — galbramc / detail
  166. Changed floor to round for generating new 1D mesh — ursachi / detail
  167. Minor refactoring — shunz / detail
  168. Compile fixes and more dependency warning suppressions — galbramc / detail
  169. Add dl library for avro — galbramc / detail
  170. Replaced nt transport equation with G variable as in SciTech paper, although the results are equivalent — shunz / detail
  171. bits and pieces — hcarson / detail
  172. added linear args and a test — hcarson / detail
  173. just wanna get my stuff in the repo — pcaplan / detail
  174. Files for parallel periodic XField2D_Box_Triangle_Lagrange (Issues need to be fixed) — kug46 / detail
  175. retrieve edge indices and sub elems from split — pcaplan / detail
  176. ref coordinates on split sub cells — pcaplan / detail
  177. Added a layer of abstractions when evaluating fluxes, sources etc. in IBL pde class — shunz / detail
  178. Fixed formatting... previously went under the radar since vera++ was not installed locally... — shunz / detail
  179. inst of some 4d adaptation things — pcaplan / detail
  180. Added scalar and dot product fixes for MatrixSymS — galbramc / detail
  181. Working on 3d ST... — cfrontin / detail
  182. Enabled smooth laminar/turbulent blending — shunz / detail
  183. Fixed SVD calculation for normal vector for 4D tet. — cfrontin / detail
  184. Scrubbed some comments. — cfrontin / detail
  185. edits to gls error estimation — arthuang / detail
  186. unit tests for basis function ref elem split — pcaplan / detail
  187. 4d adapt? — pcaplan / detail
  188. Fixed intel errors by relaxing tolerance and reconciling a missing pyrite file specialized for intel MKL — shunz / detail
  189. added a Field weighted stabilized CG nodal estimate integrand test in 2D — hcarson / detail
  190. comment — hcarson / detail
  191. Continued work on ElementXField implementations. — cfrontin / detail
  192. Vera fixes, COPYRIGHT fixes, and some avro preprocessor fixes. — cfrontin / detail
  193. Updates for 2D L2 Projection sandbox test — galbramc / detail
  194. Updates for 1D L2 Projection sandbox test — galbramc / detail
  195. Clearing out high-level exceptions whose low-level implementations are done. — cfrontin / detail
  196. Added last bits of ADST4D case, should run (?) now. — cfrontin / detail
  197. Added new trace free step matrix error model. Not enabled. — galbramc / detail
  198. added a 2D error estimate test, and asserted assumption on basis function type — hcarson / detail
  199. Fix. — cfrontin / detail
  200. fixed the estimate vary tests — hcarson / detail
  201. notebook with Double BL exact solutions — hcarson / detail
  202. forgot the copyright change — hcarson / detail
  203. Normalize MOESS optimization with nlopt — galbramc / detail
  204. Fixed undefined reference — galbramc / detail
  205. Fixed a bug in laminar/turbulent blending function — shunz / detail
  206. ifdef SANS_AVRO requirements in unit tests. — cfrontin / detail
  207. removed the scp to devastator. Should be useful for everyone now — hcarson / detail
  208. forgot to change a quadratic function explicit constructor — hcarson / detail
  209. undoing a print — hcarson / detail
  210. EQUILATERAL PENTATOPE coordinates + added unit volume check in unit test to catch this — pcaplan / detail
  211. unit test for split ref step matrix on pentatopes + generating matlab script — pcaplan / detail
  212. unit tests for error model — pcaplan / detail
  213. 4D L2 ERROR ADAPTATION WORKS...cleaning up........ — pcaplan / detail
  214. Added new MOESS optimization without global FrobNorm — galbramc / detail
  215. Forgot CMake file — galbramc / detail
  216. CG artificial viscosity in 2D — blsc / detail
  217. Small fix for cmake summary — galbramc / detail
  218. Weekly test fixes — galbramc / detail
  219. Modified AlgEqSet, IntegrandInteriorTrace and 2D DGAdvective toy for Parallel 2D Periodic Grids — kug46 / detail
  220. Towards parallel PETSc/TAO — galbramc / detail
  221. Refactored intermittency calculation — shunz / detail
  222. Generailized Projection to Qauxi to handle blended intermittency. — shunz / detail
  223. Trying to bump coverage. — cfrontin / detail
  224. Some cleanup of logEuclidian cost — galbramc / detail
  225. Added lagrange P1 to the exception — hcarson / detail
  226. copywrite update for some files — arthuang / detail
  227. Various small fixes — galbramc / detail
  228. added a Tanh2 function based on Loseille's Tanh3 — hcarson / detail
  229. Updated Embedding unit test for quadrature integration — galbramc / detail
  230. Reverted to binary intermittency as default — shunz / detail
  231. Relaxed tolerance for intel compiler.  Restored default to binary intermittency for existing tests — shunz / detail
  232. Trying to get coverage... — cfrontin / detail
  233. Tests added + un-tested, unused additions removed. — cfrontin / detail
  234. Added comments and made sure ADST4D case is ready for parallelization. — cfrontin / detail
  235. More parallel fixes. — cfrontin / detail
  236. Relaxed torleranc for gnu48 — shunz / detail
  237. More parallel fixes. — cfrontin / detail
  238. Added regularized point source to accommodate potential co-existence of free and forced transition in the captured transition treatment — shunz / detail
  239. Updated ADST3D cases (solve and adapt) for avro and MPI use. — cfrontin / detail
  240. Forgot an MPI redefine. — cfrontin / detail
  241. jk MPI fix actually this time. — cfrontin / detail
  242. Minor fix — galbramc / detail
  243. Continued avro- and MPI-ification. — cfrontin / detail
  244. Unit testing fixes. — cfrontin / detail
  245. Fixed warning. — cfrontin / detail
  246. Fixed fstream initializer. — cfrontin / detail
  247. Warning cleanup... — cfrontin / detail
  248. Fixes towards parallel+periodic — galbramc / detail
  249. Coverage improvement... — cfrontin / detail
  250. cleanup of interface to match savithru's — pcaplan / detail
  251. instantiation of 4d savithru splits (technically the extraction works because that's what i started with but the actual split does not) — pcaplan / detail
  252. Fixes for running parallel DG with periodic BCs — galbramc / detail
  253. Removed adapt4d skeleton from build. — cfrontin / detail
  254. Added instantiation — galbramc / detail
  255. ffs — cfrontin / detail
  256. instantiate SVD (with error), XField_Local calls XField_LocalPatch in 4d which local_split_patch is turned off — pcaplan / detail
  257. ifdef sans avro in sandbox file — pcaplan / detail
  258. instantiation of new MOESS SANS optimizer for 4d — pcaplan / detail
  259. experimenting w p1 adjoint — arthuang / detail
  260. adapt3d change in api — pcaplan / detail
  261. relaxed tolerance for system test — pcaplan / detail
  262. publicize error model functions...still not sure why — pcaplan / detail
  263. added note about protected methods for error model class — pcaplan / detail
  264. missing operator for 1d function — pcaplan / detail
  265. unprotected from SANS_AVRO avro namespace use — pcaplan / detail
  266. rename file to avoid copyright check — pcaplan / detail
  267. deleted file — pcaplan / detail
  268. Only have vera look at .cpp and .h files — galbramc / detail
  269. SANS_CHECK_CLOSE not BOOST_CHECK_EQUAL for floats, come on philip — pcaplan / detail
  270. bug != in shock capturing — arthuang / detail
  271. revert back to formulation — arthuang / detail
  272. add expt stab (no-op) to 2DAD — arthuang / detail
  273. Added a C2 continuous smooth abs — hcarson / detail
  274. fix intel compiler warning — pcaplan / detail
  275. add pending changes in local patch header — pcaplan / detail
  276. Run SANS_Commit in parallel — galbramc / detail
  277. Cannot specify format for 'time' on all systems — galbramc / detail
  278. Updates to SANS_Commit.sh — galbramc / detail
  279. One more parallel fix — galbramc / detail
  280. Forgot to run 'make all' — galbramc / detail
  281. Fix make warning for now — galbramc / detail
  282. dev exceptioned code required only for 4d tecplot. — cfrontin / detail
  283. added a C2 smoothabs and matlab file that generated — hcarson / detail
  284. actually got the smoothmax1, smoothmax2 functions work, also added implicitly defined smoothmin1 and smoothmin2 — hcarson / detail
  285. merge fix — cfrontin / detail
  286. merge fix 2 — cfrontin / detail
  287. working on new error models — hcarson / detail
  288. ASExpCombo function for testing L2 — hcarson / detail
  289. Revive Adapt L2Project — galbramc / detail
  290. partial cleanup of local patch before supporting CG patches — pcaplan / detail
  291. Removed PBAM — galbramc / detail
  292. fix for jenkins, smoothmax2, tweaks to SANS opt and the VectorX hack to work with Phil — hcarson / detail
  293. unparallelized a test, there's a bug in P4 Hierarchical parallel — hcarson / detail
  294. turning the P3 and P4 unsplit tests off again. There's something weird and MPI-ish going wrong here — hcarson / detail
  295. Missed one include — galbramc / detail
  296. Missed one more file — galbramc / detail
  297. more cleanup of local patch — pcaplan / detail
  298. Suppress valgrind avro+intel strange warnings — galbramc / detail
  299. Broke up DGBR2lib trying to reduce compile time — galbramc / detail
  300. pre merge — hcarson / detail
  301. support for CG local solves with XField_LocalPatch — pcaplan / detail
  302. forgot to propagate changes in function names to tests — pcaplan / detail
  303. turnon off local patch splits for jenkins — pcaplan / detail
  304. silence warning — pcaplan / detail
  305. Switched implied metric optmizer to MMA — galbramc / detail
  306. agls tweaks — arthuang / detail
  307. Relaxed tolerance — galbramc / detail
  308. complete unit tests for xfield local patch...still need some work on CG tests — pcaplan / detail
  309. merge conflict — hcarson / detail
  310. a stupid bug — hcarson / detail
  311. changes to optimizers, and also turning the modified model back off — hcarson / detail
  312. Fix work weekly — galbramc / detail
  313. Weekly suppression and revived cotire — galbramc / detail
  314. Fixed the last error. — galbramc / detail
  315. Fixed a warning — galbramc / detail
  316. Added option to use CG field for PTC time step — galbramc / detail
  317. Changed the span of the SANS frob norm penalty function — galbramc / detail
  318. unit tests for DG/CG patches — pcaplan / detail
  319. remove print_inline — pcaplan / detail
  320. Conical method of stroud added, and working. Still needs integration into pentatope. — cfrontin / detail
  321. Added a ego map to EGTessModel that maps from All egos to Unique egos — galbramc / detail
  322. add xfield for full potential code using avro — pcaplan / detail
  323. Integrated Stroud into 4D quadrature. — cfrontin / detail
  324. cleanup avro wake3d — pcaplan / detail
  325. Fixed compile error — galbramc / detail
  326. Fixed another compile error — galbramc / detail
  327. work towards high-order support for local patch split — pcaplan / detail
  328. getting unit tests to pass... — arthuang / detail
  329. fixing merge conflicts — arthuang / detail
  330. Fix up PseudoTime_btest — galbramc / detail
  331. Fixed btest memory leak. — cfrontin / detail
  332. Improved stroud testing. — cfrontin / detail
  333. experimenting with an element based local solve — arthuang / detail
  334. BCNone is dead. Long live BCNone. — hcarson / detail
  335. New Implied Metric optimizer based on logM. Various other small fixes. — galbramc / detail
  336. elemID must be global — pcaplan / detail
  337. support for high-order local patch — pcaplan / detail
  338. ifdef avro — pcaplan / detail
  339. Updates for CG 3D Euler with shock capturing and 2D RANS — blsc / detail
  340. multiple def from copy paste — pcaplan / detail
  341. uninitializaed data fix (typo) — cfrontin / detail
  342. changes to error model interface for high-order local splits — pcaplan / detail
  343. Removing problematic instantiations due to wall distance parameter with artificial viscosity for RANS — blsc / detail
  344. add info as to which type of field is being sampled — pcaplan / detail
  345. Removing code from BCEuler3D_mitState.h which was ifdef'd out — blsc / detail
  346. added integer template for equation number — hcarson / detail
  347. typo in avro wake — pcaplan / detail
  348. specialized wake model not defined without avro — pcaplan / detail
  349. added an ND test of the BCNone with and without useFluxViscous — hcarson / detail
  350. Galerkin folder passes — hcarson / detail
  351. added the downcast to NoneBC to extract the boolean — hcarson / detail
  352. converted HDG over to the new Nones — hcarson / detail
  353. Updated implied metric for TAO. Fixed a number of floating point problems. — galbramc / detail
  354. More robust testing, compiler warning silencing. — cfrontin / detail
  355. dont inherit from xfield_avro if not defined — pcaplan / detail
  356. still missing some ifdef — pcaplan / detail
  357. Various compile fixes. Generalized Adapt2D_Mesh_Optimize for all mesh generators. — galbramc / detail
  358. Missed one — galbramc / detail
  359. Warning fixes — galbramc / detail
  360. killed a few more BCTypeNone references, just plugging away — hcarson / detail
  361. pre merge — hcarson / detail
  362. Removed the BCNoneUniField — hcarson / detail
  363. Added switching for expensive PI quadrature/low-cost NI quadrature. Fixed associated tests to get correct convergence rates. — cfrontin / detail
  364. committing sandbox pre-merge — arthuang / detail
  365. someone forgot to actually use the W and B typedefs — hcarson / detail
  366. missing include — hcarson / detail
  367. fixed the CMakeLists.txt — hcarson / detail
  368. made BCNone_AV to do with annoying ArtVisc feature — hcarson / detail
  369. missing includes and last bit — hcarson / detail
  370. fixed typo: derived to dervied — hcarson / detail
  371. vera slap correction — hcarson / detail
  372. Fixed one more BCNone — galbramc / detail
  373. forgot a file — hcarson / detail
  374. Removing more of the block artificial viscosity stuff in 2D and unit test updates — blsc / detail
  375. More merge conflicts — blsc / detail
  376. More merge conflict resolution — blsc / detail
  377. Fixed memory leak. — cfrontin / detail
  378. used quadrature cache for L2 projection — pcaplan / detail
  379. fix for order = 0 integration — pcaplan / detail
  380. New cost target for SANS MOESS optimizer. Lots of work towards avro+Wakes. — galbramc / detail
  381. Fixed typo — galbramc / detail
  382. Minor fixes — galbramc / detail
  383. One more typo — galbramc / detail
  384. Unit test updates — blsc / detail
  385. Helps to use consistent array size — galbramc / detail
  386. Updates to jenkins scripts — galbramc / detail
  387. Segregating MeshAdapter — galbramc / detail
  388. Missing instantiation — blsc / detail
  389. Fixed mistake in BuildAVRO — galbramc / detail
  390. Fixes for 3D CG case with artificial viscosity — blsc / detail
  391. Fixed compile issues related to separating dimensions — galbramc / detail
  392. Initializing variables to fix some compiler warnings — blsc / detail
  393. LU factorization on processors so PETSc solves reliably — blsc / detail
  394. Missed a few — galbramc / detail
  395. IRS updates — blsc / detail
  396. Fix for gnu 4.8 — galbramc / detail
  397. Refactored tecplot output to reduce link time — galbramc / detail
  398. Forgot files — galbramc / detail
  399. Fixed muliple instantiations — galbramc / detail
  400. pre merge — pcaplan / detail
  401. Syncing with hypersonic — blsc / detail
  402. reverting a dead end — arthuang / detail
  403. Adapt4D de-mothballing. — cfrontin / detail
  404. Fixed 'potential' memory leak problem by putting frees in same scope as creation. — cfrontin / detail
  405. Suppress cppcheck bug — galbramc / detail
  406. tweaked AGLS setup, hope this one gets through!! — arthuang / detail
  407. AGLS formulation w/ correction getting good rates! push to laptop, need to fix unit tests — arthuang / detail
  408. unit tests should be working... — arthuang / detail
  409. pre merge — hcarson / detail
  410. Another cppcheck suppression — galbramc / detail
  411. clean up on choosing reSolve groups — hcarson / detail
  412. some clean up — hcarson / detail
  413. added a virtual method for computing Initial Error. The default version has the overhead of a solve associated, whereas the SolverInterface version has the cheaper version that avoids the solve and thus is more robust — hcarson / detail
  414. parameter for avro to allow for interior boundaries needed for wake models — pcaplan / detail
  415. unit tests ready to go — arthuang / detail
  416. Adding 4D Legendre basis for Adapt4D + error estimates. — cfrontin / detail
  417. cmake addition of 4d legendre... still not finished though. — cfrontin / detail
  418. oops — cfrontin / detail
  419. don't use Philip's split for now — arthuang / detail
  420. add nb for output correction — arthuang / detail
  421. got rid of a unnecessary sandbox, updated other test — arthuang / detail
  422. One less call to checkGrid for curved LocalPatch — galbramc / detail
  423. More IRS stuff — blsc / detail
  424. moved metric conformity to separate file — pcaplan / detail
  425. tried to assess metric conformity and re-adjust target cost but simpler to just ask the mesher and have inner loop on adaptations to control target cost — pcaplan / detail
  426. pushing to hypersonic — arthuang / detail
  427. some fixes to actually use the volume factor... — pcaplan / detail
  428. new elemental error estimate for CG, not especially tested but seems to be ok — hcarson / detail
  429. more tweaks to cases — hcarson / detail
  430. Add static caching for pentatope quadrature. — cfrontin / detail
  431. Set edge length bound = 1 for 1D — ursachi / detail
  432. Added exponential and maxcubic functions — ursachi / detail
  433. 1D test cases — ursachi / detail
  434. std::stringstream has a surprisingly expensive constructor — galbramc / detail
  435. Fixed formatting — galbramc / detail
  436. Added missing copyright — galbramc / detail
  437. Added missing includes — galbramc / detail
  438. include set — pcaplan / detail
  439. merge — pcaplan / detail
  440. still default to savithru's local split — pcaplan / detail
  441. protect quadrature tests with use_conical — pcaplan / detail
  442. Deleted unnecessary includes — ursachi / detail
  443. changes to make avro grids compile again — hcarson / detail
  444. cleanup and forgotten files — hcarson / detail
  445. Progress towards avro+Wakes. Added intel19 to jenkins env. — galbramc / detail
  446. Quadrature fix. — cfrontin / detail
  447. Added Legendre4D Bases. — cfrontin / detail
  448. Adapt4D ADST should *start*. — cfrontin / detail
  449. Remove files dumped by avro — galbramc / detail
  450. Fixed missing parameter checks — galbramc / detail
  451. New CFL evolution logic (ifdef'd out) — blsc / detail
  452. Missed a file — blsc / detail
  453. Improved speed of XField_LocalPatch — galbramc / detail
  454. Allow longer time for slow test — galbramc / detail
  455. debug CG local patch — pcaplan / detail
  456. Update UniqueTrace to use UniqueElem — galbramc / detail
  457. forgot a multiply — blsc / detail
  458. Added 4D pentatope Legendre unit tests. — cfrontin / detail
  459. Complete Legendre 4D test. — cfrontin / detail
  460. Actually this time. — cfrontin / detail
  461. Universalized legendre max order, refactored variable. — cfrontin / detail
  462. first errormodel additions. — cfrontin / detail
  463. Updating the delta wing case — galbramc / detail
  464. Fixed compile errors — galbramc / detail
  465. reference element tested and ready to fly. — cfrontin / detail
  466. More compile fixes for DeltaWing. avro works again with it. — galbramc / detail
  467. Logic updates for PTC to hypersonic — blsc / detail
  468. Skip blank backtrace numberes. Lots of work towards avro+Wakes — galbramc / detail
  469. Fixed test for lagrange basis function spacetime, moving coords to inherited class from base class. — cfrontin / detail
  470. warning fix, you dumbass\! — cfrontin / detail
  471. Fixed up hashing and added unit tests for UniquElem — galbramc / detail
  472. fixed cross-machine tolerancing issue. — cfrontin / detail
  473. IRS updates — blsc / detail
  474. Lots of fixes for avro+Wakes — galbramc / detail
  475. Don't dump file — galbramc / detail
  476. pre merge — hcarson / detail
  477. Reduce testing in MOESS_Gradation_Optimizer_NLOPT_btest — galbramc / detail
  478. new and improved AGLS formulation — arthuang / detail
  479. premerge — pcaplan / detail
  480. Use operator() to modify avro topologyDup — galbramc / detail
  481. Updated linesearch with missing status variables — blsc / detail
  482. Add backtrace info to singular matrix. Enable VERA_ERROR for all builds with SANS_Commit.sh — galbramc / detail
  483. Quadrature fixes — galbramc / detail
  484. Removed unnecessary line — galbramc / detail
  485. Add vera to CentOS and Rhel. Undo some fixes. — galbramc / detail
  486. Added boost to LD_LIBRARY_PATH on CentOS — galbramc / detail
  487. Guard against negative nodal metrics from ImpliedMetic optimizer — galbramc / detail
  488. Updated avro and refine build to work with .tgz files — galbramc / detail
  489. Updated build of lapack and avro build to use SANS lapack — galbramc / detail
  490. Forgot to remove test hack — galbramc / detail
  491. Fixed mistake in FindLAPACK — galbramc / detail
  492. Add more diagnostics to Jacobian failure with RefCoordSolver — galbramc / detail
  493. More debug info for singular RefCoordSolve — galbramc / detail
  494. Missing include — galbramc / detail
  495. GRRRRRRRRRRRRRRRR CELL GROUP 1 NEEDS  TO BE ADDED TO RESOLVE CELL GROUPS FOR CG GRRRRRRRRRR (╯°□°)╯︵ ┻━┻ — pcaplan / detail
  496. got rid of hackery — pcaplan / detail
  497. extra space — pcaplan / detail
  498. Working towards scale invariant DenseLinAlg solves — galbramc / detail
  499. line unit test should really allow edge split since its the same as an iso split, vera fixes too — pcaplan / detail
  500. cleanup of unused debugging stuff...what a colossal waste of time — pcaplan / detail
  501. trailing whitespace — pcaplan / detail
  502. Update vera to remove scripts when warn/error is changed. Add limits inlcude where numeric_limits is used. — galbramc / detail
  503. reverting to new AGLS formulation — arthuang / detail
  504. reverting to not use Philip's split to get thru Jenkins — arthuang / detail
  505. silence warning — pcaplan / detail
  506. Updates to CMake files — savithru / detail
  507. Fix quadrature memory leak again — galbramc / detail
  508. trying to solve pivot problem... not yet though. — cfrontin / detail
  509. added assert grid. Wraps check grid in a try-catch and return true if it passes. Can use in places where checkGrid can be removed in Release mode — hcarson / detail
  510. pre merge — hcarson / detail
  511. Updates so avro+Wake appears to be working — galbramc / detail
  512. fixed ReferenceElement constraint jacobian assignment ya dingus. — cfrontin / detail
  513. fixed ReferenceElement constraint jacobian assignment ya dingus, pt. II: unit testing boogaloo — cfrontin / detail
  514. Removed pivoting change that was dumb anyway. — cfrontin / detail
  515. Combined into one file — ursachi / detail
  516. sandbox updates — arthuang / detail
  517. moving towards rans adaptive cg — arthuang / detail
  518. RANS test case working — arthuang / detail
  519. rans joukowski working for real? — arthuang / detail
  520. Fixed link errors — galbramc / detail
  521. More fixes for avro+Wake. Needs some more checks. — galbramc / detail
  522. Forgot files — galbramc / detail
  523. Fixed compile error — galbramc / detail
  524. Split up the Adaptation library by dimension — galbramc / detail
  525. Compile error fix — galbramc / detail
  526. Fix link errors — galbramc / detail
  527. Another link error — galbramc / detail
  528. Migrated single boundary layer scalarfunction from 4D to 3D+T — cfrontin / detail
  529. Remove debug files — galbramc / detail
  530. Don't run avro with wakes due to failing debug dumps in avro — galbramc / detail
  531. Split avro Wake edges that span the entire wake — galbramc / detail
  532. Trying to split segments on wakes, but I need help... — galbramc / detail
  533. Fail depends tests if files are generated — galbramc / detail
  534. Reworking MOESS to use Field_CG — galbramc / detail
  535. revert away from Philip's local split — arthuang / detail
  536. update error estimate unit test — arthuang / detail
  537. unused variable — arthuang / detail
  538. added gravity to 2D two phase case — ericdow / detail
  539. New parameters for new EPIC 10.3 executable — galbramc / detail
  540. More reworking of MOESS — galbramc / detail
  541. More cleaning of MOESS — galbramc / detail
  542. Fix ccache path for SANS_Depend tests — galbramc / detail
  543. Another script fix for depends — galbramc / detail
  544. catch invalid split for high-order — pcaplan / detail
  545. Lots more work towards refactored MOESS — galbramc / detail
  546. More work on MOESS — galbramc / detail
  547. updated ADST cases. — cfrontin / detail
  548. MOESS refactoring to use fields seems to be done. — galbramc / detail
  549. Fixed includes — galbramc / detail
  550. Fixed parallel print statement — galbramc / detail
  551. SANS optimizer was using wrong initial step matric. — galbramc / detail
  552. Fixed bug in edge length deviation — galbramc / detail
  553. Minor fixes — galbramc / detail
  554. More ping tests — galbramc / detail
  555. Split up ProjectGlobalField — galbramc / detail
  556. Asymmetric cost schedule — galbramc / detail
  557. CMake updates — galbramc / detail
  558. continued working on debugging two phase gravity fluxes — ericdow / detail
  559. TAO implied metric calculation works in parallel — galbramc / detail
  560. Fix typo — galbramc / detail
  561. Remove mesh_0.json from tests with avro — galbramc / detail
  562. More work towards parallel MOESS with TAO — galbramc / detail
  563. Some compile fixes — galbramc / detail
  564. Synchronize error models in ghost/zombie cells — galbramc / detail
  565. Parallel MOESS is very close — galbramc / detail
  566. Link error fixes — galbramc / detail
  567. Some small fixes — galbramc / detail
  568. working out RANS stabilization terms — arthuang / detail
  569. pre merge — hcarson / detail
  570. Stole MMA from NLopt to parallelize with TAO. — galbramc / detail
  571. Added paralel serial equivalence test for MOESS TAO-MMA — galbramc / detail
  572. If I TAO+MMA does not wory, try MMA+MPI — galbramc / detail
  573. oliver test is running, not getting right rates yet — arthuang / detail
  574. Added artificial viscosity to tilted reservoir test case — savithru / detail
  575. version used in the git bisect — hcarson / detail
  576. refactored stabilized CG — arthuang / detail
  577. more robust quadrature tests, shouldn't have issues with quadrature caching. — cfrontin / detail
  578. push to laptop in the middle of updating RANSSA — arthuang / detail
  579. missing term for adjoint in RANSSA.. needs unit testing — arthuang / detail
  580. rans sourcegradientjacobiangradient thoroughly unit tested — arthuang / detail
  581. Added pressure integral output for two-phase. Modified tilted reservoir test-case. — savithru / detail
  582. Parallel MMA algorithm! — galbramc / detail
  583. Forgot the unit test — galbramc / detail
  584. and the actual files — galbramc / detail
  585. more forgotten files — galbramc / detail
  586. Some vera fixes — galbramc / detail
  587. took out demote surreal — arthuang / detail
  588. unit tests updated for stabilized integrand — arthuang / detail
  589. changes to error model to use order scaling in the regularization — hcarson / detail
  590. A number of fixes for parallel MOESS — galbramc / detail
  591. copyright notice fix — hcarson / detail
  592. fixing a function that got mangled somehow/sometime — hcarson / detail
  593. license error — hcarson / detail
  594. Updated ErrorModel_Element unit test — galbramc / detail
  595. Fixed warning and relaxed tolerance — galbramc / detail
  596. More minor fixes — galbramc / detail
  597. Added another derivative of St option — galbramc / detail
  598. Really really relaxed tolerance for Parallel/Serial equivalence for TAO with Intel... not sure whats up with that... — galbramc / detail
  599. updates to strongform integrand — arthuang / detail
  600. added needed hooks to 3D for stabilized CG — arthuang / detail
  601. Updated unit tests and whatno — blsc / detail
  602. Nightly fixes — galbramc / detail
  603. Trying to improve the speed of XField_Lagrange — galbramc / detail
  604. add RANS ndconvert omterface — arthuang / detail
  605. fixed up RANS asymptotic — arthuang / detail
  606. added trace on scalar, bug in new source fcn in 3d — arthuang / detail
  607. fixed unit test, mod source — arthuang / detail
  608. new adjoint analytic function for 1D BL — arthuang / detail
  609. added needed hooks for AV, implementation will be needed — arthuang / detail
  610. getting unit tests to pass — arthuang / detail
  611. working on RANS... — arthuang / detail
  612. relax tol on unit test — arthuang / detail
  613. truly linear adjoint — arthuang / detail
  614. caught some bugs, put in unit tests — arthuang / detail
  615. pre merge — hcarson / detail
  616. Quadrature fix on AD3DST. — cfrontin / detail
  617. AD4DST refactor. — cfrontin / detail
  618. orthodoxy is unconsciousness. — cfrontin / detail
  619. quadrature fixes — cfrontin / detail
  620. New unit tests and other updates — blsc / detail
  621. Moving stuff to hypersonic — blsc / detail
  622. More to hypersonic — blsc / detail
  623. AD4D update. — cfrontin / detail
  624. Fixed some analyzer warnings — galbramc / detail
  625. One more analyzer suppression — galbramc / detail
  626. Some MPI cleanup — galbramc / detail
  627. target dof factor — pcaplan / detail
  628. always forget to switch local split — pcaplan / detail
  629. horizontal tab — pcaplan / detail
  630. wake tests were originally off — pcaplan / detail
  631. Finalized moving nDOFpossessed to Field — galbramc / detail
  632. Added missing include — galbramc / detail
  633. settings for Marshall to run — hcarson / detail
  634. Fixed a bug in PTC residual indexing — shunz / detail
  635. Add debug information for MassMatrix singular matrix errors — galbramc / detail
  636. fixes to mesh adapt — hcarson / detail
  637. Missing include — galbramc / detail
  638. Enabled daisy chain in algebraic equation set class for PTC.  Refactored (and hopefully clarified) calculation of pseudo-transient contributions to residuals and jacobians — shunz / detail
  639. Fixed a bug in PTC AES's cell group integration calls, and a bug in residualPseudoTemporal daisy-chain call — shunz / detail
  640. Enabled PTC for coupled IBL of 4x4 block system — shunz / detail
  641. Updated unit test — shunz / detail
  642. CG RANS is looking more promising... — arthuang / detail
  643. loops in rans joukowski — arthuang / detail
  644. One more missing include — galbramc / detail
  645. fixes for jenkins — hcarson / detail
  646. fixed excessively small initial case... now starting from predicted uniform box size. — cfrontin / detail
  647. Added solve4d smart dof case. — cfrontin / detail
  648. added hooks for BICGStab — arthuang / detail
  649. Speed improvements for UniqueElem and XField_Lagrange — galbramc / detail
  650. Purged matrix manipulation Nishida hack — galbramc / detail
  651. fixed test to match ErrorModel_Elemental.h — hcarson / detail
  652. One move too many — galbramc / detail
  653. playing around with stabilization — arthuang / detail
  654. RANS with scaling — arthuang / detail
  655. Fix for jenkins parallel make — galbramc / detail
  656. Updates to porous media PDEs: added gravity to 2D two-phase, added pressure output functional — savithru / detail
  657. Vera fixes — savithru / detail
  658. Fixed copyright notice — savithru / detail
  659. One more fix.. — savithru / detail
  660. Fix uninitialized value — savithru / detail
  661. Some cleanup in PTC — shunz / detail
  662. Fixed a bug in PTC daisy chain implementation: previously, past solution and time step field was not properly updated for daisy-chained equations — shunz / detail
  663. reapply quadorder fix. — cfrontin / detail
  664. Fix for singular matrix detection. Only guard against 1/0. — galbramc / detail
  665. Separating out LAPACK from LAPACKE — galbramc / detail
  666. Fixes for LAPACK interface — galbramc / detail
  667. Forgot to switch back a change — galbramc / detail
  668. Only test with LAPACKE on reynolds — galbramc / detail
  669. Don't show LAPACKE as an option on OSX — galbramc / detail
  670. Minor fix — galbramc / detail
  671. Include MKL in coverge testing — galbramc / detail
  672. Source intel for coverage — galbramc / detail
  673. Fixes for checking LAPACK — galbramc / detail
  674. Automatic checking of all lapack functions used by SANS — galbramc / detail
  675. Some small fixes — galbramc / detail
  676. Relax tolerance a bit more for intel — galbramc / detail
  677. Added maximum rate matrix output — galbramc / detail
  678. updated i/o on 4d cases. — cfrontin / detail
  679. New files for Adjoint consistent potential — galbramc / detail
  680. Cleanup trace matrix print — galbramc / detail
  681. Forgot a file — galbramc / detail
  682. working on RANS — arthuang / detail
  683. Fixes for latest refine — galbramc / detail
  684. agls formulation looks better? — arthuang / detail
  685. modified RANS tests — arthuang / detail
  686. pre merge — hcarson / detail
  687. typo denomerator to denominator — hcarson / detail
  688. caught an indexing bug with interior trace groups — hcarson / detail
  689. some tweaks as was retesting using elemental estimates. They still don't work (phew....) — hcarson / detail
  690. changed the Galerkin DoubleBL case to match up with the DG one — hcarson / detail
  691. changed checkGrid() to assert(assertGrid()). This is the same as checkGrid() in debug mode, but gets removed in release — hcarson / detail
  692. bug fixes and clean up — hcarson / detail
  693. undoing the assertGrid, it doesn't work how I thought it did — hcarson / detail
  694. updated io on 2D+T cases. — cfrontin / detail
  695. fixed solve4d i/o — cfrontin / detail
  696. fixes to make the avro grids work in the adapt — hcarson / detail
  697. fixed h approximation, *philip's tableflip emoticon*. — cfrontin / detail
  698. oops. — cfrontin / detail
  699. hooks for modifying order and power and command line — hcarson / detail
  700. fixed dumbass error. — cfrontin / detail
  701. Minor fixes per intel guide. Fix avro+wake. — galbramc / detail
  702. still working on RANS... — arthuang / detail
  703. Some fixes for BLAS and turn off one Wake test — galbramc / detail
  704. adding new parmafield builders — arthuang / detail
  705. Forgot file dump — galbramc / detail
  706. Updated EPIC interface — galbramc / detail
  707. distance function gradient working — arthuang / detail
  708. hack for sourcegradient compiles — arthuang / detail
  709. unitialized warnings from jenkins — hcarson / detail
  710. tweak for hypersonic — hcarson / detail
  711. found a bug in RANS source gradients — arthuang / detail
  712. this one not that one — arthuang / detail
  713. deprecated ElementDual local patch. Everyone can use Element now, and it should throw an exception if you run with ElementDual — hcarson / detail
  714. added the spaceType to the dummy problems — hcarson / detail
  715. sigh. forgot they need override — hcarson / detail
  716. maaaaaan — hcarson / detail
  717. sigh — hcarson / detail
  718. Fix for PETSc 3.11 — galbramc / detail
  719. moved the all_reduce inside the #define of Boundary Outputs. The FunctionalCell_Galerkin already includes an all_reduce — hcarson / detail
  720. Setup for Mike Park to test metric calculations — galbramc / detail
  721. commiting the new error model and the two double boundary layer cases to run on hypersonic — hcarson / detail
  722. Fix nightly clang warning — galbramc / detail
  723. typos and a small test for the DOF Map, didn't catch anything... — hcarson / detail
  724. playing with formulations, added source to BC — arthuang / detail
  725. getting closer — arthuang / detail
  726. SA wake test case — arthuang / detail
  727. minor edits to rans, unit tests — arthuang / detail
  728. i think the stabilization is sound... — arthuang / detail
  729. Added case to adaptND_mesh_optimizer_toy to easily generate unstructured uniform grids. — cfrontin / detail
  730. SolveND_DGBR2_AD_ST_toy for 3D and 4D now have grid loading capability, but it's ifdeffed out for now. — cfrontin / detail
  731. fixed #define — cfrontin / detail
  732. start from DG grids — arthuang / detail
  733. more tinkering with RANS — arthuang / detail
  734. Some updates for a few things I' — blsc / detail
  735. nitsche param now includes source term — arthuang / detail
  736. Added 2D+T CG unstabilized advection diffusion mechanics. — cfrontin / detail
  737. added an integrand for estimating the square of the L2 error locally — hcarson / detail
  738. locked the TopoDim template to the Topology::TopoDim template. We should not be templating on both here, these should be removed — hcarson / detail
  739. added some integral tests — hcarson / detail
  740. A class for computing L2 error estimates, either nodally or elementally — hcarson / detail
  741. Reduced ErrorOrder_4D_DG_Pentatope_btest max grid size to reduce runtime — galbramc / detail
  742. Fixed uninitialized data with intel — galbramc / detail
  743. removed TopoDim from the for_each_XXX functions. Also added Topology::CellTopoDim, which gives the dimension of the topology for which Topology was a trace. — hcarson / detail
  744. Also made a GalerkinLib in the process of splitting out the local solve machinery for CG to use in the L2 proction solver — hcarson / detail
  745. fixing up unit tests to match new indicator calculation. Also changing mitState Nitsche to use the p independent lengthL. Will then need to choose constants properly some other way. — hcarson / detail
  746. A Nodal error estimate order test — hcarson / detail
  747. refactor into explicit instantiations and added GalerkinLib to a CMakeLists.txt I forgot — hcarson / detail
  748. more instantiations and fix a bug — hcarson / detail
  749. moving towards a CG L2 local projection. — hcarson / detail
  750. updating error estimate order tests. DG now uses the mitState BC, the CG one does not as it can't achieve the rates. There must be an instability in the adjoint.... — hcarson / detail
  751. Use CG local patch bcs for the local solve — hcarson / detail
  752. actually added the declaration to the header... — hcarson / detail
  753. Added a re-roll of the c++-14 make_unique feature — hcarson / detail
  754. Added a re-roll of the c++-14 make_unique feature — hcarson / detail
  755. first use of make_unique. — hcarson / detail
  756. ErrorEstimateL2 should now handle p0 or p1 estimation gracefully, and also actually handled that stupid merge conflict — hcarson / detail
  757. Fixed many clang analyzer complaints — galbramc / detail
  758. new MDG directory — arthuang / detail
  759. MDG integrand cell unit test passing — arthuang / detail
  760. changed name of test and added the notebook that generated the L2 error integrand tests — hcarson / detail
  761. forgot an mpi include — hcarson / detail
  762. all_reduce only works on POD not the KahanSum — hcarson / detail
  763. some tweaks — hcarson / detail
  764. interior trace w/ 1d unit test — arthuang / detail
  765. missed a bracket in the merge — arthuang / detail
  766. jacobian ping test added for cell,trace — arthuang / detail
  767. forgot to turn CG LG trace back on — hcarson / detail
  768. added CG sandbox for AD 2D+T problem. — cfrontin / detail
  769. Fixed more analyzer warningw — galbramc / detail
  770. fixed for push, incorporated hugh's mistakenly included preprocessor define. — cfrontin / detail
  771. more hugh fixes plus trueoutput fixes. — cfrontin / detail
  772. SolverInterfaceL2 project actually uses the correct local patch for CG now — hcarson / detail
  773. JEEEEENNNNKIONNNNSSSSS — cfrontin / detail
  774. added SA nitsche — arthuang / detail
  775. jacobian and residual unit tests passing — arthuang / detail
  776. Fixed typo — galbramc / detail
  777. jenkins punched me in the face *again*. — cfrontin / detail
  778. MDG solve works.. needs debugging — arthuang / detail
  779. grumble — cfrontin / detail
  780. VOLUME_WEIGHTED crept through on those last commits. It shouldn't have and this fixes that — hcarson / detail
  781. why oh why did i not save the fixes last time — cfrontin / detail
  782. preprocessor sandbox troubles. — cfrontin / detail
  783. dumb preprocessor stuff fix. — cfrontin / detail
  784. bad include habits fixed. — cfrontin / detail
  785. MDG solves! optimal rates! — arthuang / detail
  786. warning fix. — cfrontin / detail
  787. moved some includes into the cpps — hcarson / detail
  788. removed PrimalNeighbors and added in Vertex — hcarson / detail
  789. Created Vertex Local grid. Have the four cpp, but only Area is actually declared, others would have link errors. Also a super basic unsplit test — hcarson / detail
  790. getting closer to everything compiling — arthuang / detail
  791. moved jacobian calculations into output integrands for Galerkin. bunch of stuff still not working — arthuang / detail
  792. getting closer to passing unit tests.. — arthuang / detail
  793. unit tests updated — arthuang / detail
  794. unit test/compile fixes — arthuang / detail
  795. indentation warning — arthuang / detail
  796. last final last warning bother. — cfrontin / detail
  797. tidying solve3d_CG_AD_ST_toy — cfrontin / detail
  798. Added vertexMode to Local patch, and edgeMap constructor to LocalBase — hcarson / detail
  799. removed the vertex local specialist patch. It might eventually be faster, but the development time would be much much slower — hcarson / detail
  800. MDG jacobianfunctional in place, solves are compiling — arthuang / detail
  801. 3D+T pde stuff should be good to go. — cfrontin / detail
  802. made the central vertex always dof 0. Also added flag for whether patch comes from splitting an edge attached to the vertex — hcarson / detail
  803. MDG compiles fine but doesn't stabilize in advective limit. Hmm... — arthuang / detail
  804. forgot to include a PrimalNeighbors rename — hcarson / detail
  805. MDG working well again.. we have to figure out the Nitsche BCs — arthuang / detail
  806. Some of the updates from hypersonic before merging — blsc / detail
  807. change cb back to 2 to pass Jenkins — arthuang / detail
  808. 2D error order compiling — arthuang / detail
  809. add function hooks to 3DST — arthuang / detail
  810. added function hooks for 1d, 2d spacetime — arthuang / detail
  811. fieldweighted cell integrand for MDG — arthuang / detail
  812. Fix some issues that came up during debug build — blsc / detail
  813. added fieldweighted for MDG trace integrand — arthuang / detail
  814. More clang analyzer warning fixes. — galbramc / detail
  815. more needed function hooks — arthuang / detail
  816. change to isothermal wall BCs, push to hypersonic — arthuang / detail
  817. ughhhhhh more ndconvert troubles — arthuang / detail
  818. add isothermal to RANs BCs — arthuang / detail
  819. working towards the nodal model. Moving to laptop — hcarson / detail
  820. working towards local indicator — hcarson / detail
  821. added the Simplex meta class — hcarson / detail
  822. moving to lab box — hcarson / detail
  823. removed unused typedef — arthuang / detail
  824. Nightly fixes — galbramc / detail
  825. fixed mdg unit tests — arthuang / detail
  826. Propogating changed from develop — blsc / detail
  827. Nightly fixes — galbramc / detail
  828. reordered MDG jac, added error estimate cell — arthuang / detail
  829. merge conflict — hcarson / detail
  830. RANS cases working pretty well, pushing to hypersonic — arthuang / detail
  831. mdg error estimates in place — arthuang / detail
  832. took out adjointState functions (mostly) — arthuang / detail
  833. completed sourceJacobianHACK change. MDG adjoints not quite working... — arthuang / detail
  834. Think I've got all the updates from hypersonic — blsc / detail
  835. 4d cg fields starting up... — cfrontin / detail
  836. error estimate unit test passing, but sandbox case is off... — arthuang / detail
  837. mdg error estimates working! — arthuang / detail
  838. typo — arthuang / detail
  839. cleanup — arthuang / detail
  840. moved into the SANS namespace — hcarson / detail
  841. removed Topology template, used Simplex<TopoDim> instead — hcarson / detail
  842. fixed hack interface — arthuang / detail
  843. added sub-cell step matrix accessor with 1D and 2D unit tests — hcarson / detail
  844. added unit testing for 3D RANS fncs, other cleanup — arthuang / detail
  845. forgot a file — arthuang / detail
  846. sandbox edits — arthuang / detail
  847. complaining about includes? — arthuang / detail
  848. unused variables.. push to tucano for memcheck — arthuang / detail
  849. unit test name change — arthuang / detail
  850. missing definition — arthuang / detail
  851. trying to fix segfault — arthuang / detail
  852. fixed the warning, but there's a segfault somewhere in edgelocal3d... — arthuang / detail
  853. wow that was really dumb but took 4 hours to find — arthuang / detail
  854. putting Nitsche into stabilization object.. stil lin process — arthuang / detail
  855. premerge — arthuang / detail
  856. most things compiling... — arthuang / detail
  857. added affine invariant implied metric calculation — hcarson / detail
  858. nitsche parameter change complete.. things seem to compile ok — arthuang / detail
  859. member variables out of order — arthuang / detail
  860. Added unit tests for gravity term in PDETwoPhase2D + some cleanup — savithru / detail
  861. tweaks to get MDG working for systems — arthuang / detail
  862. fixed checks for parallel — arthuang / detail
  863. whoops switched back — arthuang / detail
  864. hopefully more correct for parallel? — arthuang / detail
  865. Nightly fixes — galbramc / detail
  866. Another nightly fix — galbramc / detail
  867. More nightly fixes — galbramc / detail
  868. Another nightly fix — galbramc / detail
  869. big refactor of the edge solve. Removed the cell group business, and now builds nodal models from the data of the edge solves. No testing quite yet, but it compiles! — hcarson / detail
  870. on the way to 4d-ification of CG... — cfrontin / detail
  871. Hopefully last warning fix — galbramc / detail
  872. more of the same... — cfrontin / detail
  873. minor edits that shouldn't affect anything — arthuang / detail
  874. Merge conflict resolution and formatting issues — blsc / detail
  875. added a cell->node map to the nodalview. Also fixed a bug with edge local not correctly identifying that a node can be common to both vertices without sharing a cell with the edge. Basically a real niche case — hcarson / detail
  876. added hashing function for GroupElemIndex. Uses boost::hash. Can now use unordered_set and unordered_map on GroupElemIndex. Should be faster in those cases where we don't need orderedness, only unique — hcarson / detail
  877. tiny tweaks. uses linspace — hcarson / detail
  878. tweaks to the affInv implied metric option. Also forgot to add the #if for reference step calc — hcarson / detail
  879. added some commented code for inspecting eigenvalues for a 2x2 system. Useful for debugging — hcarson / detail
  880. MDG with discontinuous efld.. does better! — arthuang / detail
  881. working towards error estimate from fine scale — arthuang / detail
  882. minor change to AGLS — arthuang / detail
  883. missed a function update — arthuang / detail
  884. push to hypersonic — arthuang / detail
  885. push to hypersonic — arthuang / detail
  886. few changes to MDG output — arthuang / detail
  887. mdg rans sandbox compiling — arthuang / detail
  888. extra args for output — arthuang / detail
  889. print resid bug fix — arthuang / detail
  890. MDG qp should initialize to zero — arthuang / detail
  891. Commented out some stuff (with developer exceptions), will have to go back to that code — blsc / detail
  892. Updated tolerances — blsc / detail
  893. Removed unused variables — blsc / detail
  894. add nitsche to mdg traces — arthuang / detail
  895. towards p= 1+ 3D+T AD... — cfrontin / detail
  896. update mdg solutiondata constructor — arthuang / detail
  897. experimenting w upwind bcs — arthuang / detail
  898. compiling — arthuang / detail
  899. moving to hypersonic — hcarson / detail
  900. Formatting fixes — blsc / detail
  901. experimenting with distance fcn gradients again — arthuang / detail
  902. fixing some bugs and moving to hypersonic — hcarson / detail
  903. another flag to turn off the metric dumping — hcarson / detail
  904. More vera warnings — blsc / detail
  905. separated Nitsche order and stabilization order — arthuang / detail
  906. Fixed unit test bug — blsc / detail
  907. changed FrobNormSq formula for MatrixSymS to exploit the symmetry — hcarson / detail
  908. added an inner product for VectorS. Can also handle a range of weighted inner products, with MatrixS, MatrixSymS and a diagonal — hcarson / detail
  909. added some instantiations, also started using the InnerProduct function directly — hcarson / detail
  910. dgbr2 joukowski w solver interfaces — arthuang / detail
  911. added some 3D+T CG stuff ... work in progress... added 1D+T AD for learning syntax, added a lot of comments. — cfrontin / detail
  912. changed to 1 pt quadrature implied metric calculation. — hcarson / detail
  913. added mean, min, max quality calculator and output in the NLOPT output — hcarson / detail
  914. linked the use of the modified model to the use of the SANS optimizer. No longer compile time flag — hcarson / detail
  915. removed VOLUME_WEIGHTED and added FULL_NODAL. This compile time flag needs to be set to run in the nodal view of the world. Long term this will be the way to go, but it only works in serial presently, so leaving it disabled by default — hcarson / detail
  916. forgot to fix the mpi bit — hcarson / detail
  917. apparently boost::mpi needs its own special minimum and maximum functions... — hcarson / detail
  918. shortened the file by removing unneeded commenting and dead space — hcarson / detail
  919. missing 4d instantiation and an attempt at removing the compiler error. At least I compiled gnu5 and couldn't recreate it... — hcarson / detail
  920. maybe this works? — hcarson / detail
  921. forgot that we can't actually dump 4d grids... — hcarson / detail
  922. changed the exception to a warning — hcarson / detail
  923. forgot to rename them edge tests — hcarson / detail
  924. sigh — hcarson / detail
  925. manually return group and elem to make intel happy. Also reduced the number of shuffles to 3 in the implied test — hcarson / detail
  926. changed the tolerances a little, should now be able to do more shuffles — hcarson / detail
  927. changed the initial condition for the optimization to Log Euclidean. Had a case where affine invariant failed the non-linear solve, so lets just skip that — hcarson / detail
  928. Increasing coverage — blsc / detail
  929. only doing 1 shuffle in 3D because the bloody coverage takes too long — hcarson / detail
  930. I swear... — hcarson / detail
  931. using the max in the implied calculation. The optimization is so much easier/faster — hcarson / detail
  932. added a 3d corner singularity and also made the 3D L2 adapt flag based — hcarson / detail
  933. tweaks to try speed this damn thing up and get it through jenkins — hcarson / detail
  934. correct beta val — hcarson / detail
  935. added more iterations to the AffInv calc, and use the FrobNorm from DLA — hcarson / detail
  936. save the last mesh, explicitly 2D folder, and Affine Invariant metric calculation — hcarson / detail
  937. added the objective of maximizing average quality, this is also not a good one, but unsure what to do... — hcarson / detail
  938. changed the range for the loops, so that the lower dof counts can be run serial — hcarson / detail
  939. More coverage — blsc / detail
  940. Nightly fixes — blsc / detail
  941. changed AffInv to throw exception and revert to Log Euclidean. Also raised the tolerance slightly, as the tolerance is done the norm. Thus sqrt(eps) = 1e-8, so setting tol to 1e-7 — hcarson / detail
  942. fixed betas. reset dump Metric to every iteration. changed 3D to dump the final qfld with the same filename — hcarson / detail
  943. use the max det met — hcarson / detail
  944. Cleaned up well models, modified fixed outflow rate well to use a distributed source term, added a new output function for computing bottom-hole pressure of fixed rate wells — savithru / detail
  945. temp patch for 4D grid io — cfrontin / detail
  946. switch to sine^4 exact solution for solve4d cases. — cfrontin / detail
  947. added outerproduct for VectorS — hcarson / detail
  948. Hopefully faster 3D eigen solves — galbramc / detail
  949. Forgot unit tests — galbramc / detail
  950. Added an enum class for adding quality to the implied metric objective, can do maximize or minimize inverse. Also InverseLengthTensor for calculating the metric. Also fixed up the AffineInvariant calculation to use the correct Gradient descent algorithm from Pennec, thus it actually works now. — hcarson / detail
  951. tweaks for cases — hcarson / detail
  952. much reduced the tolerance for the affine invariant calculation. The non-linear optimization is really not that bad, and it is the most theoretically justifiable metric, so we should use it — hcarson / detail
  953. some typo fixes, some documentary additions, some work on 4d CG field structures. CG not working yet for 4D w/ order > 1. needs some DEVEL EXCEPTIONS before push. — cfrontin / detail
  954. Added the correct output functional for computing the bottom-hole pressure of a fixed-rate well — savithru / detail
  955. a forgotten rename — hcarson / detail
  956. Fix for new 3D eigen value calculation — galbramc / detail
  957. Relaxed a tolerance — galbramc / detail
  958. debugging hell. — cfrontin / detail
  959. Fix intel leak. Better logic checking for refine. — galbramc / detail
  960. moving to hype — hcarson / detail
  961. Updates to track CAD parameters with avro — galbramc / detail
  962. some comments. Also changed the affine invariant calculation to count the number of unconverged solves, record the maximum norm and also increased the tolerance — hcarson / detail
  963. moving branch — hcarson / detail
  964. stylish stylish jenkins — hcarson / detail
  965. Some fixes for avro. Show implied metric cost. — galbramc / detail
  966. changed the advection direction for the Triple BL. Was displaying low-rank structure (>p+1 convergence), suspect because of fluke with rotational symmetry — hcarson / detail
  967. actually using mpi properly hopefully. Also fixed the test for the affine invariant calc — hcarson / detail
  968. make the print to screen scientific so it's actually informative — hcarson / detail
  969. figured out xfield trace coordinates arent matching their element compadres. added unit tests, still not passing though. — cfrontin / detail
  970. Fixes for avro with full potential — galbramc / detail
  971. Fix typo and warning — galbramc / detail
  972. its an unsigned int not a Real you fool — hcarson / detail
  973. Fixes for CAD parameters with avro in parallel — galbramc / detail
  974. Fixed TraceToCellRefCoord_Pentatope. — cfrontin / detail
  975. 4d xfield trace coordinate ordering bug fixed and re-tested. back to working on cg construction. probably some nefarious stuff in 4d-land that needs to be exceptioned out, but currently only im in that region. — cfrontin / detail
  976. warning fix — cfrontin / detail
  977. remove debugging ifdef switch. — cfrontin / detail
  978. Updated Wake+avro tests with curvature — galbramc / detail
  979. Missed file dump — galbramc / detail
  980. still tryna pass jenkins. added avro switching. — cfrontin / detail
  981. add interfacest to Phil's localpatch to work with Hugh's — arthuang / detail
  982. ffs ifdef SANS_AVRO again — cfrontin / detail
  983. forgot to only report unconverged if actually unconverged — hcarson / detail
  984. fixed tracetocellrefcoord bug side-effects. everything truly broken should have developer exceptions too now. — cfrontin / detail
  985. fixed bug in volume output functional — arthuang / detail
  986. setting the values of beta to those espoused in the proof paper — hcarson / detail
  987. Changed the AD cases to use similar command line interface to the L2 cases. Changed the advection directions to not be aligned with diag. Changed the peclet numbers to be 25 for all cases (unitary advection magnitude), should give reasonable order convergence without wild dof counts. Also changed the exact output calculations to be symbolic, so we can change the advection and diffusion values without having to recalculate — hcarson / detail
  988. added x vs h and x vs AR dumping for the BL case. Doesn't really seem to show very much though, I think Masa was being cheeky — hcarson / detail
  989. Unified and cleaned up output functionals for 2D two-phase. Added unit tests for BHP calculations. — savithru / detail
  990. Changed implied optimization from -Q to 1-Q. Fixes so full potential works with adaptation. — galbramc / detail
  991. Maybe fixed nightly warning — galbramc / detail
  992. Fixed build error — galbramc / detail
  993. Fixed warning — savithru / detail
  994. nightly fix — cfrontin / detail
  995. One more — savithru / detail
  996. A few more compile fixes — galbramc / detail
  997. vera fix 2.0 — cfrontin / detail
  998. VERA FFS A SEMICOLON?! — cfrontin / detail
  999. cleaning up some CG — arthuang / detail
  1000. Put CostModel integration order back — galbramc / detail
  1001. in the middle of getting CG w lifting operators — arthuang / detail
  1002. forgot a file — arthuang / detail
  1003. found the bug! — arthuang / detail
  1004. CG w BR2 adapts up and running — arthuang / detail
  1005. missing something... — arthuang / detail
  1006. mod error order tests — arthuang / detail
  1007. Added elementEdges function to get runtime edge maps — galbramc / detail
  1008. Updates for new avro file layout — galbramc / detail
  1009. Fix for clang — galbramc / detail
  1010. Fixes for g++-9 — galbramc / detail
  1011. Removed the avro instance — galbramc / detail
  1012. Fix weekly clang compile error — galbramc / detail
  1013. Fixed weekly memory leaks — galbramc / detail
  1014. moving back towards MDG stuffs — arthuang / detail
  1015. forgot a file — arthuang / detail
  1016. copyright vera error — arthuang / detail
  1017. got rid of whitespace — arthuang / detail
  1018. making things consistent for Nitsche, MDG — arthuang / detail
  1019. got rid of avro include — arthuang / detail
  1020. missed a update on nitsche — arthuang / detail
  1021. fixedu nit test — arthuang / detail
  1022. update error order test — arthuang / detail
  1023. Added ksabo@mit.edu to DeveloperEmailAddresses — ksabo / detail
  1024. relax tol for intel — arthuang / detail

#238 (Jun 15, 2019, 1:52:06 AM)

  1. taking out some comments — arthuang / detail
  2. Taking the warning machete to things. — cfrontin / detail
  3. Refactored test case input — shunz / detail
  4. Udpates to sansLIPAIM to work with new CAPS dataTransfer setup — galbramc / detail
  5. system test for DG with pentatopes — pcaplan / detail
  6. Minor update — shunz / detail
  7. Added an option of wake ctau_eq but not used — shunz / detail
  8. moving to hyper branch — hcarson / detail
  9. MCMC flat plate for class — hcarson / detail
  10. forcing function for heating — hcarson / detail
  11. use SANS convention for trace orientation instead of the one used in avro — pcaplan / detail
  12. 1Ptope test working, fixed assumptions on nodal definitions. — cfrontin / detail
  13. fixed GLS? — arthuang / detail
  14. edit cmake list — arthuang / detail
  15. 2Tope unitgrid working, testcase working. — cfrontin / detail
  16. Turned off tesseract for push. — cfrontin / detail
  17. Light LIP tecplot files — galbramc / detail
  18. Smaller tecplot file for LIP — galbramc / detail
  19. Fix scoping issues. — cfrontin / detail
  20. Fixed warnings — galbramc / detail
  21. Added comment with origin of SVD3 algorithm — galbramc / detail
  22. handmade unit grid: 1 pentatope with 5 pentatope neighbours — pcaplan / detail
  23. allow all orientations of traces (1 to 12) in checkGrid — pcaplan / detail
  24. local grid extraction for pentatopes — pcaplan / detail
  25. cell to trace connectivity for pentatopes — pcaplan / detail
  26. finish implementation of element associativity of pentatopes — pcaplan / detail
  27. unit tests for local grid extraction around pentatopes (single pentatope and single pentatope surrounded by neighbours) — pcaplan / detail
  28. other minor changes — pcaplan / detail
  29. gradprojection working — arthuang / detail
  30. verified optimal order for 1DAD grad projection — arthuang / detail
  31. comm rank = 0 using xfield_lagrange — pcaplan / detail
  32. 24Ptope working, passing checkGrids(). test in progress. — cfrontin / detail
  33. remove duplicate unit grids in favour of handmade ones — pcaplan / detail
  34. warning fix — pcaplan / detail
  35. warning fix — pcaplan / detail
  36. 24Ptope unit grid working, tested and working. — cfrontin / detail
  37. commit so it ought to run for ben? — hcarson / detail
  38. Add duration to each build in Jenkins email. — galbramc / detail
  39. tweaks and the forcing — hcarson / detail
  40. full rank diffusive stabilizaiton — arthuang / detail
  41. actually making it not work — hcarson / detail
  42. changed the try catch for implied metric optimization to doing nothing rather than excepting. Also tweaks to MCMC file — hcarson / detail
  43. tweaks and removed a bunch of heap memory allocations — hcarson / detail
  44. added options to the quadratic — hcarson / detail
  45. more mods to projection stabilization — arthuang / detail
  46. undoing a lot of sketchy things — arthuang / detail
  47. rolling back more sketchy stuff — arthuang / detail
  48. mods for running with avro — hcarson / detail
  49. comment typos — hcarson / detail
  50. switching over to avro — hcarson / detail
  51. everything compiles, gotta track down unit tests — arthuang / detail
  52. getting unit tests to pass — arthuang / detail
  53. Reworked build of parmetis. refine uses parmetis. added avro build. — galbramc / detail
  54. minor edits to edge local unit tests — arthuang / detail
  55. Fixes for avro and refine — galbramc / detail
  56. Suppress warning — galbramc / detail
  57. Parallel Field4D test fixes. Give refine more time. — galbramc / detail
  58. Relaxed tolerance for intel — galbramc / detail
  59. Don't run ErrorOrder_4D in parallel — galbramc / detail
  60. Updated refine build — galbramc / detail
  61. Updated refine check — galbramc / detail
  62. Nightly build fixes... plus a stopgap ifdef until the SVDless 4D normal vector is done. — cfrontin / detail
  63. Reduce run time of 4D error order check — galbramc / detail
  64. Relaxed another tolerance — galbramc / detail
  65. trying out some edge stabilization — arthuang / detail
  66. MCMC things and got the temp sensors working — hcarson / detail
  67. Remove files written by avro — galbramc / detail
  68. Dissable refine testing for now — galbramc / detail
  69. Added memcheck to parmetis build — galbramc / detail
  70. Ignore external parmetis — galbramc / detail
  71. added hessian to interior trace — arthuang / detail
  72. edge stabilization working-ish? — arthuang / detail
  73. changing branch — hcarson / detail
  74. MC for running on hypersonic — hcarson / detail
  75. ready for running on hypersonic — hcarson / detail
  76. Generalized valgrind suppression — galbramc / detail
  77. moving to hypersonic again — hcarson / detail
  78. egads coords must have 3 dimensions even in 2d — pcaplan / detail
  79. the final files from the project — hcarson / detail
  80. forgot a function — hcarson / detail
  81. pushing to tucano — arthuang / detail
  82. Suppressed CMakeLists errors. [TBD] — shunz / detail
  83. Fixed panel metod tests — shunz / detail
  84. AFLR4 updates and some Jenkins scripts — galbramc / detail
  85. Link tetgen before avro — galbramc / detail
  86. instantation of elementlocal version of local splits for 4d...unit test will fail because the result is different than savi's convention — pcaplan / detail
  87. missing definitions for elementlocal & edgelocal — pcaplan / detail
  88. some instantiations of savi's method for doing local splits — pcaplan / detail
  89. xfield_lagrange method of doing local splits...still debugging...will fix later... — pcaplan / detail
  90. Refactoring.  Patched unit tests — shunz / detail
  91. More unit tests — shunz / detail
  92. added unit tests — shunz / detail
  93. Fixed unit tests — shunz / detail
  94. Fixed IBL unit tests — shunz / detail
  95. Added unit test.  Turned off unused methods. — shunz / detail
  96. Fixed a bug in CMakeLists: use of out-of-scope variable — shunz / detail
  97. Fixed a bug in cmake files that only appear when building with Xcode — shunz / detail
  98. Refactored ping test input array type.  Fixed IBL-related 4x4 block system ping tests.  Added missing MPI-related method definitions for pure virtural methods — shunz / detail
  99. Relocated code into SANS_MPI macros; otherwise, errors are raised about "member access to incomplete type" — shunz / detail
  100. Verified/fixed/cleaned IBL system tests with transition (full upwind). — shunz / detail
  101. Fixed duplicate naming of boost test suite — shunz / detail
  102. Relaxed pyrite tolerance — shunz / detail
  103. Updated forced-transition pyrite files after the bug fix in commit b30121ee5531d91e84aac94fbdab6462f458f4f8 — shunz / detail
  104. Turned off file dump — shunz / detail
  105. Fixed formatting — shunz / detail
  106. Fixed empty traling line — shunz / detail
  107. Fixed DG and HDG AES tests for uncoupled IBL — shunz / detail
  108. Fixed formatting — shunz / detail
  109. Reverted changes to (viscous) HDG stuff: those abandoned changes treated qfld and afld as a single bundle field — shunz / detail
  110. Update AlgebraicEquationSet_HDGAdvective_Advection_btest.cpp — shunz / detail
  111. Fixed one more test affected by ping test refactoring.  Fixed formatting and screen output — shunz / detail
  112. Fixed another system test affected by IBL Qauxv interpreter refactoring — shunz / detail
  113. Update ErrorOrder_1D_HDGAdvective_Advection_btest.cpp — shunz / detail
  114. Fixed warning and missing instantiation — shunz / detail
  115. Added an instantiation just for completeness, although it is no longer used — shunz / detail
  116. moving towards adjoint GLS — arthuang / detail
  117. Cleaned sandbox cases — shunz / detail
  118. relaxed tolerances for clang_release — shunz / detail
  119. Suppressed output — shunz / detail
  120. Fixed bugs in CMakeLists — shunz / detail
  121. Fixed HDG advection tests — shunz / detail
  122. Removed the pure advection test case using (viscous) HDG machinery — shunz / detail
  123. parallel outputs in galerkin solver interface, AGLS error estimation fixed? — arthuang / detail
  124. Refactored halving line search and fixed unit tests — shunz / detail
  125. Fixed memory errors — shunz / detail
  126. Relaxed tolerance for intel — shunz / detail
  127. relaxed tolerances for intel18 — shunz / detail
  128. Relaxed timeout limits — shunz / detail
  129. Speed up unit tests in response to Jenkins timeout — shunz / detail
  130. Fixed typo — shunz / detail
  131. Relaxed tolerance for gnu48 — shunz / detail
  132. Tried to fix timeout on Jenkins testing (coverage_clang reynolds) — shunz / detail
  133. Reverted CMakeLists to see if TIMEOUT is set properly this time on Jenkins — shunz / detail
  134. minor refactoring — shunz / detail
  135. Refactored CMakeLists for Xcode build — shunz / detail
  136. Refactored Newton solver — shunz / detail
  137. Minor fix — shunz / detail
  138. Fixed warnings — shunz / detail
  139. Added IBL max update fraction — shunz / detail
  140. Enabled under-relaxed Newton update for coupled 4x4 block system of IBL with free transition. — shunz / detail
  141. Refactor of avro XField interface — galbramc / detail
  142. Consistent logic for setting cmake testing timout property — galbramc / detail
  143. Fixed refine interface change — galbramc / detail
  144. Fix ifdef when not using avro — galbramc / detail
  145. More fixes to deal with avro — galbramc / detail
  146. Minor cleanup — galbramc / detail
  147. Added unit tests for IBL updateFraction — shunz / detail
  148. Upgrade PETSc — galbramc / detail
  149. More avro and PETSc tweaks — galbramc / detail
  150. I don't understand why dl library is needed to link a static library... — galbramc / detail
  151. Fix for refine check — galbramc / detail
  152. Suppress compiler warning when building PETSc — galbramc / detail
  153. Fix for avro with 4D — galbramc / detail
  154. Enable refine testing again — galbramc / detail
  155. Updated copyright date to 2019 — galbramc / detail
  156. Updated copyright date to 2019 — galbramc / detail
  157. dimension-independent local splits — pcaplan / detail
  158. timing tests show dim-independent implementation on par with savithru's impl...tried to debug hugh's local xfield in primal mode but something is wrong...unit tests on the way — pcaplan / detail
  159. adding stabilized error estimation infrastructure — arthuang / detail
  160. more playing with AGLS — arthuang / detail
  161. minor edits — arthuang / detail
  162. reconciling merge conflicts and some tweaks — hcarson / detail
  163. license updates — hcarson / detail
  164. fixes to match avro — hcarson / detail
  165. forgot to add the avro defined precompile check — hcarson / detail
  166. relaxed tolerances and forgot to split world — hcarson / detail
  167. tweaking tol again... — hcarson / detail
  168. another tweak... — hcarson / detail
  169. cleanup of localpatch + commenting — pcaplan / detail
  170. copyright — pcaplan / detail
  171. more copyright — pcaplan / detail
  172. Updates for MOESS optimizations. Still needs more work. — galbramc / detail
  173. Instantiations for 4D AD solve. — galbramc / detail
  174. A few fixes — galbramc / detail
  175. Compile fixes — galbramc / detail
  176. More instantiations for 4D — galbramc / detail
  177. removed anachronistic definition of primal grid. Primal grid now matches the behavior of the normal DG grids. Unit tests have just been turned off in the meantime — hcarson / detail
  178. make sure mpi is init'd before calling rank by actually running in parallel — pcaplan / detail
  179. revert back to dual — pcaplan / detail
  180. ifdef SANS_AVRO for tests with CKF triangulation — pcaplan / detail
  181. changed to Dual in the system test — hcarson / detail
  182. attempted to fix nightly tests — shunz / detail
  183. Relaxed timings, fixed warning — galbramc / detail
  184. Updated pyrite files to fix nightly tests — shunz / detail
  185. Moved timing test into sandbox — galbramc / detail
  186. Cleanup of refine interface with auto memory management. — galbramc / detail
  187. Modest progress on instantiations. — cfrontin / detail
  188. Fix include — galbramc / detail
  189. 4D box unit grid grandfathered out of XField_KuhnFreudenthal. — cfrontin / detail
  190. added fix to 3D — hcarson / detail
  191. removed the separate 4D file, just added an instantiate at the end of 3D — hcarson / detail
  192. p=7 led to error close to machine zero, which seemed to cause touble to nightly ErrorOrder test.  Cut back p from 7 to 6 — shunz / detail
  193. p=6 still too high for pyrite test for ErrorOrder — shunz / detail
  194. Attempted to warning "use of zero-allocated memory" — shunz / detail
  195. Some cleanup in the sandbox. Added 2D L2Project adaptation — galbramc / detail
  196. Added tecplot dump for metric fields. Other small fixes — galbramc / detail
  197. Changed floor to round for generating new 1D mesh — ursachi / detail
  198. Minor refactoring — shunz / detail
  199. Compile fixes and more dependency warning suppressions — galbramc / detail
  200. Add dl library for avro — galbramc / detail
  201. Replaced nt transport equation with G variable as in SciTech paper, although the results are equivalent — shunz / detail
  202. bits and pieces — hcarson / detail
  203. added linear args and a test — hcarson / detail
  204. just wanna get my stuff in the repo — pcaplan / detail
  205. Files for parallel periodic XField2D_Box_Triangle_Lagrange (Issues need to be fixed) — kug46 / detail
  206. retrieve edge indices and sub elems from split — pcaplan / detail
  207. ref coordinates on split sub cells — pcaplan / detail
  208. Added a layer of abstractions when evaluating fluxes, sources etc. in IBL pde class — shunz / detail
  209. Fixed formatting... previously went under the radar since vera++ was not installed locally... — shunz / detail
  210. inst of some 4d adaptation things — pcaplan / detail
  211. Added scalar and dot product fixes for MatrixSymS — galbramc / detail
  212. Working on 3d ST... — cfrontin / detail
  213. Enabled smooth laminar/turbulent blending — shunz / detail
  214. Fixed SVD calculation for normal vector for 4D tet. — cfrontin / detail
  215. Scrubbed some comments. — cfrontin / detail
  216. edits to gls error estimation — arthuang / detail
  217. unit tests for basis function ref elem split — pcaplan / detail
  218. 4d adapt? — pcaplan / detail
  219. Fixed intel errors by relaxing tolerance and reconciling a missing pyrite file specialized for intel MKL — shunz / detail
  220. added a Field weighted stabilized CG nodal estimate integrand test in 2D — hcarson / detail
  221. comment — hcarson / detail
  222. Continued work on ElementXField implementations. — cfrontin / detail
  223. Vera fixes, COPYRIGHT fixes, and some avro preprocessor fixes. — cfrontin / detail
  224. Updates for 2D L2 Projection sandbox test — galbramc / detail
  225. Updates for 1D L2 Projection sandbox test — galbramc / detail
  226. Clearing out high-level exceptions whose low-level implementations are done. — cfrontin / detail
  227. Added last bits of ADST4D case, should run (?) now. — cfrontin / detail
  228. Added new trace free step matrix error model. Not enabled. — galbramc / detail
  229. added a 2D error estimate test, and asserted assumption on basis function type — hcarson / detail
  230. Fix. — cfrontin / detail
  231. fixed the estimate vary tests — hcarson / detail
  232. notebook with Double BL exact solutions — hcarson / detail
  233. forgot the copyright change — hcarson / detail
  234. Normalize MOESS optimization with nlopt — galbramc / detail
  235. Fixed undefined reference — galbramc / detail
  236. Fixed a bug in laminar/turbulent blending function — shunz / detail
  237. ifdef SANS_AVRO requirements in unit tests. — cfrontin / detail
  238. removed the scp to devastator. Should be useful for everyone now — hcarson / detail
  239. forgot to change a quadratic function explicit constructor — hcarson / detail
  240. undoing a print — hcarson / detail
  241. EQUILATERAL PENTATOPE coordinates + added unit volume check in unit test to catch this — pcaplan / detail
  242. unit test for split ref step matrix on pentatopes + generating matlab script — pcaplan / detail
  243. unit tests for error model — pcaplan / detail
  244. 4D L2 ERROR ADAPTATION WORKS...cleaning up........ — pcaplan / detail
  245. Added new MOESS optimization without global FrobNorm — galbramc / detail
  246. Forgot CMake file — galbramc / detail
  247. CG artificial viscosity in 2D — blsc / detail
  248. Small fix for cmake summary — galbramc / detail
  249. Weekly test fixes — galbramc / detail
  250. Modified AlgEqSet, IntegrandInteriorTrace and 2D DGAdvective toy for Parallel 2D Periodic Grids — kug46 / detail
  251. Towards parallel PETSc/TAO — galbramc / detail
  252. Refactored intermittency calculation — shunz / detail
  253. Generailized Projection to Qauxi to handle blended intermittency. — shunz / detail
  254. Trying to bump coverage. — cfrontin / detail
  255. Some cleanup of logEuclidian cost — galbramc / detail
  256. Added lagrange P1 to the exception — hcarson / detail
  257. copywrite update for some files — arthuang / detail
  258. Various small fixes — galbramc / detail
  259. added a Tanh2 function based on Loseille's Tanh3 — hcarson / detail
  260. Updated Embedding unit test for quadrature integration — galbramc / detail
  261. Reverted to binary intermittency as default — shunz / detail
  262. Relaxed tolerance for intel compiler.  Restored default to binary intermittency for existing tests — shunz / detail
  263. Trying to get coverage... — cfrontin / detail
  264. Tests added + un-tested, unused additions removed. — cfrontin / detail
  265. Added comments and made sure ADST4D case is ready for parallelization. — cfrontin / detail
  266. More parallel fixes. — cfrontin / detail
  267. Relaxed torleranc for gnu48 — shunz / detail
  268. More parallel fixes. — cfrontin / detail
  269. Added regularized point source to accommodate potential co-existence of free and forced transition in the captured transition treatment — shunz / detail
  270. Updated ADST3D cases (solve and adapt) for avro and MPI use. — cfrontin / detail
  271. Forgot an MPI redefine. — cfrontin / detail
  272. jk MPI fix actually this time. — cfrontin / detail
  273. Minor fix — galbramc / detail
  274. Continued avro- and MPI-ification. — cfrontin / detail
  275. Unit testing fixes. — cfrontin / detail
  276. Fixed warning. — cfrontin / detail
  277. Fixed fstream initializer. — cfrontin / detail
  278. Warning cleanup... — cfrontin / detail
  279. Fixes towards parallel+periodic — galbramc / detail
  280. Coverage improvement... — cfrontin / detail
  281. cleanup of interface to match savithru's — pcaplan / detail
  282. instantiation of 4d savithru splits (technically the extraction works because that's what i started with but the actual split does not) — pcaplan / detail
  283. Fixes for running parallel DG with periodic BCs — galbramc / detail
  284. Removed adapt4d skeleton from build. — cfrontin / detail
  285. Added instantiation — galbramc / detail
  286. ffs — cfrontin / detail
  287. instantiate SVD (with error), XField_Local calls XField_LocalPatch in 4d which local_split_patch is turned off — pcaplan / detail
  288. ifdef sans avro in sandbox file — pcaplan / detail
  289. instantiation of new MOESS SANS optimizer for 4d — pcaplan / detail
  290. experimenting w p1 adjoint — arthuang / detail
  291. adapt3d change in api — pcaplan / detail
  292. relaxed tolerance for system test — pcaplan / detail
  293. publicize error model functions...still not sure why — pcaplan / detail
  294. added note about protected methods for error model class — pcaplan / detail
  295. missing operator for 1d function — pcaplan / detail
  296. unprotected from SANS_AVRO avro namespace use — pcaplan / detail
  297. rename file to avoid copyright check — pcaplan / detail
  298. deleted file — pcaplan / detail
  299. Only have vera look at .cpp and .h files — galbramc / detail
  300. SANS_CHECK_CLOSE not BOOST_CHECK_EQUAL for floats, come on philip — pcaplan / detail
  301. bug != in shock capturing — arthuang / detail
  302. revert back to formulation — arthuang / detail
  303. add expt stab (no-op) to 2DAD — arthuang / detail
  304. Added a C2 continuous smooth abs — hcarson / detail
  305. fix intel compiler warning — pcaplan / detail
  306. add pending changes in local patch header — pcaplan / detail
  307. Run SANS_Commit in parallel — galbramc / detail
  308. Cannot specify format for 'time' on all systems — galbramc / detail
  309. Updates to SANS_Commit.sh — galbramc / detail
  310. One more parallel fix — galbramc / detail
  311. Forgot to run 'make all' — galbramc / detail
  312. Fix make warning for now — galbramc / detail
  313. dev exceptioned code required only for 4d tecplot. — cfrontin / detail
  314. added a C2 smoothabs and matlab file that generated — hcarson / detail
  315. actually got the smoothmax1, smoothmax2 functions work, also added implicitly defined smoothmin1 and smoothmin2 — hcarson / detail
  316. merge fix — cfrontin / detail
  317. merge fix 2 — cfrontin / detail
  318. working on new error models — hcarson / detail
  319. ASExpCombo function for testing L2 — hcarson / detail
  320. Revive Adapt L2Project — galbramc / detail
  321. partial cleanup of local patch before supporting CG patches — pcaplan / detail
  322. Removed PBAM — galbramc / detail
  323. fix for jenkins, smoothmax2, tweaks to SANS opt and the VectorX hack to work with Phil — hcarson / detail
  324. unparallelized a test, there's a bug in P4 Hierarchical parallel — hcarson / detail
  325. turning the P3 and P4 unsplit tests off again. There's something weird and MPI-ish going wrong here — hcarson / detail
  326. Missed one include — galbramc / detail
  327. Missed one more file — galbramc / detail
  328. more cleanup of local patch — pcaplan / detail
  329. Suppress valgrind avro+intel strange warnings — galbramc / detail
  330. Broke up DGBR2lib trying to reduce compile time — galbramc / detail
  331. pre merge — hcarson / detail
  332. support for CG local solves with XField_LocalPatch — pcaplan / detail
  333. forgot to propagate changes in function names to tests — pcaplan / detail
  334. turnon off local patch splits for jenkins — pcaplan / detail
  335. silence warning — pcaplan / detail
  336. Switched implied metric optmizer to MMA — galbramc / detail
  337. agls tweaks — arthuang / detail
  338. Relaxed tolerance — galbramc / detail
  339. complete unit tests for xfield local patch...still need some work on CG tests — pcaplan / detail
  340. merge conflict — hcarson / detail
  341. a stupid bug — hcarson / detail
  342. changes to optimizers, and also turning the modified model back off — hcarson / detail
  343. Fix work weekly — galbramc / detail
  344. Weekly suppression and revived cotire — galbramc / detail
  345. Fixed the last error. — galbramc / detail
  346. Fixed a warning — galbramc / detail
  347. Added option to use CG field for PTC time step — galbramc / detail
  348. Changed the span of the SANS frob norm penalty function — galbramc / detail
  349. unit tests for DG/CG patches — pcaplan / detail
  350. remove print_inline — pcaplan / detail
  351. Conical method of stroud added, and working. Still needs integration into pentatope. — cfrontin / detail
  352. Added a ego map to EGTessModel that maps from All egos to Unique egos — galbramc / detail
  353. add xfield for full potential code using avro — pcaplan / detail
  354. Integrated Stroud into 4D quadrature. — cfrontin / detail
  355. cleanup avro wake3d — pcaplan / detail
  356. Fixed compile error — galbramc / detail
  357. Fixed another compile error — galbramc / detail
  358. work towards high-order support for local patch split — pcaplan / detail
  359. getting unit tests to pass... — arthuang / detail
  360. fixing merge conflicts — arthuang / detail
  361. Fix up PseudoTime_btest — galbramc / detail
  362. Fixed btest memory leak. — cfrontin / detail
  363. Improved stroud testing. — cfrontin / detail
  364. experimenting with an element based local solve — arthuang / detail
  365. BCNone is dead. Long live BCNone. — hcarson / detail
  366. New Implied Metric optimizer based on logM. Various other small fixes. — galbramc / detail
  367. elemID must be global — pcaplan / detail
  368. support for high-order local patch — pcaplan / detail
  369. ifdef avro — pcaplan / detail
  370. Updates for CG 3D Euler with shock capturing and 2D RANS — blsc / detail
  371. multiple def from copy paste — pcaplan / detail
  372. uninitializaed data fix (typo) — cfrontin / detail
  373. changes to error model interface for high-order local splits — pcaplan / detail
  374. Removing problematic instantiations due to wall distance parameter with artificial viscosity for RANS — blsc / detail
  375. add info as to which type of field is being sampled — pcaplan / detail
  376. Removing code from BCEuler3D_mitState.h which was ifdef'd out — blsc / detail
  377. added integer template for equation number — hcarson / detail
  378. typo in avro wake — pcaplan / detail
  379. specialized wake model not defined without avro — pcaplan / detail
  380. added an ND test of the BCNone with and without useFluxViscous — hcarson / detail
  381. Galerkin folder passes — hcarson / detail
  382. added the downcast to NoneBC to extract the boolean — hcarson / detail
  383. converted HDG over to the new Nones — hcarson / detail
  384. Updated implied metric for TAO. Fixed a number of floating point problems. — galbramc / detail
  385. More robust testing, compiler warning silencing. — cfrontin / detail
  386. dont inherit from xfield_avro if not defined — pcaplan / detail
  387. still missing some ifdef — pcaplan / detail
  388. Various compile fixes. Generalized Adapt2D_Mesh_Optimize for all mesh generators. — galbramc / detail
  389. Missed one — galbramc / detail
  390. Warning fixes — galbramc / detail
  391. killed a few more BCTypeNone references, just plugging away — hcarson / detail
  392. pre merge — hcarson / detail
  393. Removed the BCNoneUniField — hcarson / detail
  394. Added switching for expensive PI quadrature/low-cost NI quadrature. Fixed associated tests to get correct convergence rates. — cfrontin / detail
  395. committing sandbox pre-merge — arthuang / detail
  396. someone forgot to actually use the W and B typedefs — hcarson / detail
  397. missing include — hcarson / detail
  398. fixed the CMakeLists.txt — hcarson / detail
  399. made BCNone_AV to do with annoying ArtVisc feature — hcarson / detail
  400. missing includes and last bit — hcarson / detail
  401. fixed typo: derived to dervied — hcarson / detail
  402. vera slap correction — hcarson / detail
  403. Fixed one more BCNone — galbramc / detail
  404. forgot a file — hcarson / detail
  405. Removing more of the block artificial viscosity stuff in 2D and unit test updates — blsc / detail
  406. More merge conflicts — blsc / detail
  407. More merge conflict resolution — blsc / detail
  408. Fixed memory leak. — cfrontin / detail
  409. used quadrature cache for L2 projection — pcaplan / detail
  410. fix for order = 0 integration — pcaplan / detail
  411. New cost target for SANS MOESS optimizer. Lots of work towards avro+Wakes. — galbramc / detail
  412. Fixed typo — galbramc / detail
  413. Minor fixes — galbramc / detail
  414. One more typo — galbramc / detail
  415. Unit test updates — blsc / detail
  416. Helps to use consistent array size — galbramc / detail
  417. Updates to jenkins scripts — galbramc / detail
  418. Segregating MeshAdapter — galbramc / detail
  419. Missing instantiation — blsc / detail
  420. Fixed mistake in BuildAVRO — galbramc / detail
  421. Fixes for 3D CG case with artificial viscosity — blsc / detail
  422. Fixed compile issues related to separating dimensions — galbramc / detail
  423. Initializing variables to fix some compiler warnings — blsc / detail
  424. LU factorization on processors so PETSc solves reliably — blsc / detail
  425. Missed a few — galbramc / detail
  426. IRS updates — blsc / detail
  427. Fix for gnu 4.8 — galbramc / detail
  428. Refactored tecplot output to reduce link time — galbramc / detail
  429. Forgot files — galbramc / detail
  430. Fixed muliple instantiations — galbramc / detail
  431. pre merge — pcaplan / detail
  432. Syncing with hypersonic — blsc / detail
  433. reverting a dead end — arthuang / detail
  434. Adapt4D de-mothballing. — cfrontin / detail
  435. Fixed 'potential' memory leak problem by putting frees in same scope as creation. — cfrontin / detail
  436. Suppress cppcheck bug — galbramc / detail
  437. tweaked AGLS setup, hope this one gets through!! — arthuang / detail
  438. AGLS formulation w/ correction getting good rates! push to laptop, need to fix unit tests — arthuang / detail
  439. unit tests should be working... — arthuang / detail
  440. pre merge — hcarson / detail
  441. Another cppcheck suppression — galbramc / detail
  442. clean up on choosing reSolve groups — hcarson / detail
  443. some clean up — hcarson / detail
  444. added a virtual method for computing Initial Error. The default version has the overhead of a solve associated, whereas the SolverInterface version has the cheaper version that avoids the solve and thus is more robust — hcarson / detail
  445. parameter for avro to allow for interior boundaries needed for wake models — pcaplan / detail
  446. unit tests ready to go — arthuang / detail
  447. Adding 4D Legendre basis for Adapt4D + error estimates. — cfrontin / detail
  448. cmake addition of 4d legendre... still not finished though. — cfrontin / detail
  449. oops — cfrontin / detail
  450. don't use Philip's split for now — arthuang / detail
  451. add nb for output correction — arthuang / detail
  452. got rid of a unnecessary sandbox, updated other test — arthuang / detail
  453. One less call to checkGrid for curved LocalPatch — galbramc / detail
  454. More IRS stuff — blsc / detail
  455. moved metric conformity to separate file — pcaplan / detail
  456. tried to assess metric conformity and re-adjust target cost but simpler to just ask the mesher and have inner loop on adaptations to control target cost — pcaplan / detail
  457. pushing to hypersonic — arthuang / detail
  458. some fixes to actually use the volume factor... — pcaplan / detail
  459. new elemental error estimate for CG, not especially tested but seems to be ok — hcarson / detail
  460. more tweaks to cases — hcarson / detail
  461. Add static caching for pentatope quadrature. — cfrontin / detail
  462. Set edge length bound = 1 for 1D — ursachi / detail
  463. Added exponential and maxcubic functions — ursachi / detail
  464. 1D test cases — ursachi / detail
  465. std::stringstream has a surprisingly expensive constructor — galbramc / detail
  466. Fixed formatting — galbramc / detail
  467. Added missing copyright — galbramc / detail
  468. Added missing includes — galbramc / detail
  469. include set — pcaplan / detail
  470. merge — pcaplan / detail
  471. still default to savithru's local split — pcaplan / detail
  472. protect quadrature tests with use_conical — pcaplan / detail
  473. Deleted unnecessary includes — ursachi / detail
  474. changes to make avro grids compile again — hcarson / detail
  475. cleanup and forgotten files — hcarson / detail
  476. Progress towards avro+Wakes. Added intel19 to jenkins env. — galbramc / detail
  477. Quadrature fix. — cfrontin / detail
  478. Added Legendre4D Bases. — cfrontin / detail
  479. Adapt4D ADST should *start*. — cfrontin / detail
  480. Remove files dumped by avro — galbramc / detail
  481. Fixed missing parameter checks — galbramc / detail
  482. New CFL evolution logic (ifdef'd out) — blsc / detail
  483. Missed a file — blsc / detail
  484. Improved speed of XField_LocalPatch — galbramc / detail
  485. Allow longer time for slow test — galbramc / detail
  486. debug CG local patch — pcaplan / detail
  487. Update UniqueTrace to use UniqueElem — galbramc / detail
  488. forgot a multiply — blsc / detail
  489. Added 4D pentatope Legendre unit tests. — cfrontin / detail
  490. Complete Legendre 4D test. — cfrontin / detail
  491. Actually this time. — cfrontin / detail
  492. Universalized legendre max order, refactored variable. — cfrontin / detail
  493. first errormodel additions. — cfrontin / detail
  494. Updating the delta wing case — galbramc / detail
  495. Fixed compile errors — galbramc / detail
  496. reference element tested and ready to fly. — cfrontin / detail
  497. More compile fixes for DeltaWing. avro works again with it. — galbramc / detail
  498. Logic updates for PTC to hypersonic — blsc / detail
  499. Skip blank backtrace numberes. Lots of work towards avro+Wakes — galbramc / detail
  500. Fixed test for lagrange basis function spacetime, moving coords to inherited class from base class. — cfrontin / detail
  501. warning fix, you dumbass\! — cfrontin / detail
  502. Fixed up hashing and added unit tests for UniquElem — galbramc / detail
  503. fixed cross-machine tolerancing issue. — cfrontin / detail
  504. IRS updates — blsc / detail
  505. Lots of fixes for avro+Wakes — galbramc / detail
  506. Don't dump file — galbramc / detail
  507. pre merge — hcarson / detail
  508. Reduce testing in MOESS_Gradation_Optimizer_NLOPT_btest — galbramc / detail
  509. new and improved AGLS formulation — arthuang / detail
  510. premerge — pcaplan / detail
  511. Use operator() to modify avro topologyDup — galbramc / detail
  512. Updated linesearch with missing status variables — blsc / detail
  513. Add backtrace info to singular matrix. Enable VERA_ERROR for all builds with SANS_Commit.sh — galbramc / detail
  514. Quadrature fixes — galbramc / detail
  515. Removed unnecessary line — galbramc / detail
  516. Add vera to CentOS and Rhel. Undo some fixes. — galbramc / detail
  517. Added boost to LD_LIBRARY_PATH on CentOS — galbramc / detail
  518. Guard against negative nodal metrics from ImpliedMetic optimizer — galbramc / detail
  519. Updated avro and refine build to work with .tgz files — galbramc / detail
  520. Updated build of lapack and avro build to use SANS lapack — galbramc / detail
  521. Forgot to remove test hack — galbramc / detail
  522. Fixed mistake in FindLAPACK — galbramc / detail
  523. Add more diagnostics to Jacobian failure with RefCoordSolver — galbramc / detail
  524. More debug info for singular RefCoordSolve — galbramc / detail
  525. Missing include — galbramc / detail
  526. GRRRRRRRRRRRRRRRR CELL GROUP 1 NEEDS  TO BE ADDED TO RESOLVE CELL GROUPS FOR CG GRRRRRRRRRR (╯°□°)╯︵ ┻━┻ — pcaplan / detail
  527. got rid of hackery — pcaplan / detail
  528. extra space — pcaplan / detail
  529. Working towards scale invariant DenseLinAlg solves — galbramc / detail
  530. line unit test should really allow edge split since its the same as an iso split, vera fixes too — pcaplan / detail
  531. cleanup of unused debugging stuff...what a colossal waste of time — pcaplan / detail
  532. trailing whitespace — pcaplan / detail
  533. Update vera to remove scripts when warn/error is changed. Add limits inlcude where numeric_limits is used. — galbramc / detail
  534. reverting to new AGLS formulation — arthuang / detail
  535. reverting to not use Philip's split to get thru Jenkins — arthuang / detail
  536. silence warning — pcaplan / detail
  537. Updates to CMake files — savithru / detail
  538. Fix quadrature memory leak again — galbramc / detail
  539. trying to solve pivot problem... not yet though. — cfrontin / detail
  540. added assert grid. Wraps check grid in a try-catch and return true if it passes. Can use in places where checkGrid can be removed in Release mode — hcarson / detail
  541. pre merge — hcarson / detail
  542. Updates so avro+Wake appears to be working — galbramc / detail
  543. fixed ReferenceElement constraint jacobian assignment ya dingus. — cfrontin / detail
  544. fixed ReferenceElement constraint jacobian assignment ya dingus, pt. II: unit testing boogaloo — cfrontin / detail
  545. Removed pivoting change that was dumb anyway. — cfrontin / detail
  546. Combined into one file — ursachi / detail
  547. sandbox updates — arthuang / detail
  548. moving towards rans adaptive cg — arthuang / detail
  549. RANS test case working — arthuang / detail
  550. rans joukowski working for real? — arthuang / detail
  551. Fixed link errors — galbramc / detail
  552. More fixes for avro+Wake. Needs some more checks. — galbramc / detail
  553. Forgot files — galbramc / detail
  554. Fixed compile error — galbramc / detail
  555. Split up the Adaptation library by dimension — galbramc / detail
  556. Compile error fix — galbramc / detail
  557. Fix link errors — galbramc / detail
  558. Another link error — galbramc / detail
  559. Migrated single boundary layer scalarfunction from 4D to 3D+T — cfrontin / detail
  560. Remove debug files — galbramc / detail
  561. Don't run avro with wakes due to failing debug dumps in avro — galbramc / detail
  562. Split avro Wake edges that span the entire wake — galbramc / detail
  563. Trying to split segments on wakes, but I need help... — galbramc / detail
  564. Fail depends tests if files are generated — galbramc / detail
  565. Reworking MOESS to use Field_CG — galbramc / detail
  566. revert away from Philip's local split — arthuang / detail
  567. update error estimate unit test — arthuang / detail
  568. unused variable — arthuang / detail
  569. added gravity to 2D two phase case — ericdow / detail
  570. New parameters for new EPIC 10.3 executable — galbramc / detail
  571. More reworking of MOESS — galbramc / detail
  572. More cleaning of MOESS — galbramc / detail
  573. Fix ccache path for SANS_Depend tests — galbramc / detail
  574. Another script fix for depends — galbramc / detail
  575. catch invalid split for high-order — pcaplan / detail
  576. Lots more work towards refactored MOESS — galbramc / detail
  577. More work on MOESS — galbramc / detail
  578. updated ADST cases. — cfrontin / detail
  579. MOESS refactoring to use fields seems to be done. — galbramc / detail
  580. Fixed includes — galbramc / detail
  581. Fixed parallel print statement — galbramc / detail
  582. SANS optimizer was using wrong initial step matric. — galbramc / detail
  583. Fixed bug in edge length deviation — galbramc / detail
  584. Minor fixes — galbramc / detail
  585. More ping tests — galbramc / detail
  586. Split up ProjectGlobalField — galbramc / detail
  587. Asymmetric cost schedule — galbramc / detail
  588. CMake updates — galbramc / detail
  589. continued working on debugging two phase gravity fluxes — ericdow / detail
  590. TAO implied metric calculation works in parallel — galbramc / detail
  591. Fix typo — galbramc / detail
  592. Remove mesh_0.json from tests with avro — galbramc / detail
  593. More work towards parallel MOESS with TAO — galbramc / detail
  594. Some compile fixes — galbramc / detail
  595. Synchronize error models in ghost/zombie cells — galbramc / detail
  596. Parallel MOESS is very close — galbramc / detail
  597. Link error fixes — galbramc / detail
  598. Some small fixes — galbramc / detail
  599. working out RANS stabilization terms — arthuang / detail
  600. pre merge — hcarson / detail
  601. Stole MMA from NLopt to parallelize with TAO. — galbramc / detail
  602. Added paralel serial equivalence test for MOESS TAO-MMA — galbramc / detail
  603. If I TAO+MMA does not wory, try MMA+MPI — galbramc / detail
  604. oliver test is running, not getting right rates yet — arthuang / detail
  605. Added artificial viscosity to tilted reservoir test case — savithru / detail
  606. version used in the git bisect — hcarson / detail
  607. refactored stabilized CG — arthuang / detail
  608. more robust quadrature tests, shouldn't have issues with quadrature caching. — cfrontin / detail
  609. push to laptop in the middle of updating RANSSA — arthuang / detail
  610. missing term for adjoint in RANSSA.. needs unit testing — arthuang / detail
  611. rans sourcegradientjacobiangradient thoroughly unit tested — arthuang / detail
  612. Added pressure integral output for two-phase. Modified tilted reservoir test-case. — savithru / detail
  613. Parallel MMA algorithm! — galbramc / detail
  614. Forgot the unit test — galbramc / detail
  615. and the actual files — galbramc / detail
  616. more forgotten files — galbramc / detail
  617. Some vera fixes — galbramc / detail
  618. took out demote surreal — arthuang / detail
  619. unit tests updated for stabilized integrand — arthuang / detail
  620. changes to error model to use order scaling in the regularization — hcarson / detail
  621. A number of fixes for parallel MOESS — galbramc / detail
  622. copyright notice fix — hcarson / detail
  623. fixing a function that got mangled somehow/sometime — hcarson / detail
  624. license error — hcarson / detail
  625. Updated ErrorModel_Element unit test — galbramc / detail
  626. Fixed warning and relaxed tolerance — galbramc / detail
  627. More minor fixes — galbramc / detail
  628. Added another derivative of St option — galbramc / detail
  629. Really really relaxed tolerance for Parallel/Serial equivalence for TAO with Intel... not sure whats up with that... — galbramc / detail
  630. updates to strongform integrand — arthuang / detail
  631. added needed hooks to 3D for stabilized CG — arthuang / detail
  632. Updated unit tests and whatno — blsc / detail
  633. Nightly fixes — galbramc / detail
  634. Trying to improve the speed of XField_Lagrange — galbramc / detail
  635. add RANS ndconvert omterface — arthuang / detail
  636. fixed up RANS asymptotic — arthuang / detail
  637. added trace on scalar, bug in new source fcn in 3d — arthuang / detail
  638. fixed unit test, mod source — arthuang / detail
  639. new adjoint analytic function for 1D BL — arthuang / detail
  640. added needed hooks for AV, implementation will be needed — arthuang / detail
  641. getting unit tests to pass — arthuang / detail
  642. working on RANS... — arthuang / detail
  643. relax tol on unit test — arthuang / detail
  644. truly linear adjoint — arthuang / detail
  645. caught some bugs, put in unit tests — arthuang / detail
  646. pre merge — hcarson / detail
  647. Quadrature fix on AD3DST. — cfrontin / detail
  648. AD4DST refactor. — cfrontin / detail
  649. orthodoxy is unconsciousness. — cfrontin / detail
  650. quadrature fixes — cfrontin / detail
  651. New unit tests and other updates — blsc / detail
  652. Moving stuff to hypersonic — blsc / detail
  653. More to hypersonic — blsc / detail
  654. AD4D update. — cfrontin / detail
  655. Fixed some analyzer warnings — galbramc / detail
  656. One more analyzer suppression — galbramc / detail
  657. Some MPI cleanup — galbramc / detail
  658. target dof factor — pcaplan / detail
  659. always forget to switch local split — pcaplan / detail
  660. horizontal tab — pcaplan / detail
  661. wake tests were originally off — pcaplan / detail
  662. Finalized moving nDOFpossessed to Field — galbramc / detail
  663. Added missing include — galbramc / detail
  664. settings for Marshall to run — hcarson / detail
  665. Fixed a bug in PTC residual indexing — shunz / detail
  666. Add debug information for MassMatrix singular matrix errors — galbramc / detail
  667. fixes to mesh adapt — hcarson / detail
  668. Missing include — galbramc / detail
  669. Enabled daisy chain in algebraic equation set class for PTC.  Refactored (and hopefully clarified) calculation of pseudo-transient contributions to residuals and jacobians — shunz / detail
  670. Fixed a bug in PTC AES's cell group integration calls, and a bug in residualPseudoTemporal daisy-chain call — shunz / detail
  671. Enabled PTC for coupled IBL of 4x4 block system — shunz / detail
  672. Updated unit test — shunz / detail
  673. CG RANS is looking more promising... — arthuang / detail
  674. loops in rans joukowski — arthuang / detail
  675. One more missing include — galbramc / detail
  676. fixes for jenkins — hcarson / detail
  677. fixed excessively small initial case... now starting from predicted uniform box size. — cfrontin / detail
  678. Added solve4d smart dof case. — cfrontin / detail
  679. added hooks for BICGStab — arthuang / detail
  680. Speed improvements for UniqueElem and XField_Lagrange — galbramc / detail
  681. Purged matrix manipulation Nishida hack — galbramc / detail
  682. fixed test to match ErrorModel_Elemental.h — hcarson / detail
  683. One move too many — galbramc / detail
  684. playing around with stabilization — arthuang / detail
  685. RANS with scaling — arthuang / detail
  686. Fix for jenkins parallel make — galbramc / detail
  687. Updates to porous media PDEs: added gravity to 2D two-phase, added pressure output functional — savithru / detail
  688. Vera fixes — savithru / detail
  689. Fixed copyright notice — savithru / detail
  690. One more fix.. — savithru / detail
  691. Fix uninitialized value — savithru / detail
  692. Some cleanup in PTC — shunz / detail
  693. Fixed a bug in PTC daisy chain implementation: previously, past solution and time step field was not properly updated for daisy-chained equations — shunz / detail
  694. reapply quadorder fix. — cfrontin / detail
  695. Fix for singular matrix detection. Only guard against 1/0. — galbramc / detail
  696. Separating out LAPACK from LAPACKE — galbramc / detail
  697. Fixes for LAPACK interface — galbramc / detail
  698. Forgot to switch back a change — galbramc / detail
  699. Only test with LAPACKE on reynolds — galbramc / detail
  700. Don't show LAPACKE as an option on OSX — galbramc / detail
  701. Minor fix — galbramc / detail
  702. Include MKL in coverge testing — galbramc / detail
  703. Source intel for coverage — galbramc / detail
  704. Fixes for checking LAPACK — galbramc / detail
  705. Automatic checking of all lapack functions used by SANS — galbramc / detail
  706. Some small fixes — galbramc / detail
  707. Relax tolerance a bit more for intel — galbramc / detail
  708. Added maximum rate matrix output — galbramc / detail
  709. updated i/o on 4d cases. — cfrontin / detail
  710. New files for Adjoint consistent potential — galbramc / detail
  711. Cleanup trace matrix print — galbramc / detail
  712. Forgot a file — galbramc / detail
  713. working on RANS — arthuang / detail
  714. Fixes for latest refine — galbramc / detail
  715. agls formulation looks better? — arthuang / detail
  716. modified RANS tests — arthuang / detail
  717. pre merge — hcarson / detail
  718. typo denomerator to denominator — hcarson / detail
  719. caught an indexing bug with interior trace groups — hcarson / detail
  720. some tweaks as was retesting using elemental estimates. They still don't work (phew....) — hcarson / detail
  721. changed the Galerkin DoubleBL case to match up with the DG one — hcarson / detail
  722. changed checkGrid() to assert(assertGrid()). This is the same as checkGrid() in debug mode, but gets removed in release — hcarson / detail
  723. bug fixes and clean up — hcarson / detail
  724. undoing the assertGrid, it doesn't work how I thought it did — hcarson / detail
  725. updated io on 2D+T cases. — cfrontin / detail
  726. fixed solve4d i/o — cfrontin / detail
  727. fixes to make the avro grids work in the adapt — hcarson / detail
  728. fixed h approximation, *philip's tableflip emoticon*. — cfrontin / detail
  729. oops. — cfrontin / detail
  730. hooks for modifying order and power and command line — hcarson / detail
  731. fixed dumbass error. — cfrontin / detail
  732. Minor fixes per intel guide. Fix avro+wake. — galbramc / detail
  733. still working on RANS... — arthuang / detail
  734. Some fixes for BLAS and turn off one Wake test — galbramc / detail
  735. adding new parmafield builders — arthuang / detail
  736. Forgot file dump — galbramc / detail
  737. Updated EPIC interface — galbramc / detail
  738. distance function gradient working — arthuang / detail
  739. hack for sourcegradient compiles — arthuang / detail
  740. unitialized warnings from jenkins — hcarson / detail
  741. tweak for hypersonic — hcarson / detail
  742. found a bug in RANS source gradients — arthuang / detail
  743. this one not that one — arthuang / detail
  744. deprecated ElementDual local patch. Everyone can use Element now, and it should throw an exception if you run with ElementDual — hcarson / detail
  745. added the spaceType to the dummy problems — hcarson / detail
  746. sigh. forgot they need override — hcarson / detail
  747. maaaaaan — hcarson / detail
  748. sigh — hcarson / detail
  749. Fix for PETSc 3.11 — galbramc / detail
  750. moved the all_reduce inside the #define of Boundary Outputs. The FunctionalCell_Galerkin already includes an all_reduce — hcarson / detail
  751. Setup for Mike Park to test metric calculations — galbramc / detail
  752. commiting the new error model and the two double boundary layer cases to run on hypersonic — hcarson / detail
  753. Fix nightly clang warning — galbramc / detail
  754. typos and a small test for the DOF Map, didn't catch anything... — hcarson / detail
  755. playing with formulations, added source to BC — arthuang / detail
  756. getting closer — arthuang / detail
  757. SA wake test case — arthuang / detail
  758. minor edits to rans, unit tests — arthuang / detail
  759. i think the stabilization is sound... — arthuang / detail
  760. Added case to adaptND_mesh_optimizer_toy to easily generate unstructured uniform grids. — cfrontin / detail
  761. SolveND_DGBR2_AD_ST_toy for 3D and 4D now have grid loading capability, but it's ifdeffed out for now. — cfrontin / detail
  762. fixed #define — cfrontin / detail
  763. start from DG grids — arthuang / detail
  764. more tinkering with RANS — arthuang / detail
  765. Some updates for a few things I' — blsc / detail
  766. nitsche param now includes source term — arthuang / detail
  767. Added 2D+T CG unstabilized advection diffusion mechanics. — cfrontin / detail
  768. added an integrand for estimating the square of the L2 error locally — hcarson / detail
  769. locked the TopoDim template to the Topology::TopoDim template. We should not be templating on both here, these should be removed — hcarson / detail
  770. added some integral tests — hcarson / detail
  771. A class for computing L2 error estimates, either nodally or elementally — hcarson / detail
  772. Reduced ErrorOrder_4D_DG_Pentatope_btest max grid size to reduce runtime — galbramc / detail
  773. Fixed uninitialized data with intel — galbramc / detail
  774. removed TopoDim from the for_each_XXX functions. Also added Topology::CellTopoDim, which gives the dimension of the topology for which Topology was a trace. — hcarson / detail
  775. Also made a GalerkinLib in the process of splitting out the local solve machinery for CG to use in the L2 proction solver — hcarson / detail
  776. fixing up unit tests to match new indicator calculation. Also changing mitState Nitsche to use the p independent lengthL. Will then need to choose constants properly some other way. — hcarson / detail
  777. A Nodal error estimate order test — hcarson / detail
  778. refactor into explicit instantiations and added GalerkinLib to a CMakeLists.txt I forgot — hcarson / detail
  779. more instantiations and fix a bug — hcarson / detail
  780. moving towards a CG L2 local projection. — hcarson / detail
  781. updating error estimate order tests. DG now uses the mitState BC, the CG one does not as it can't achieve the rates. There must be an instability in the adjoint.... — hcarson / detail
  782. Use CG local patch bcs for the local solve — hcarson / detail
  783. actually added the declaration to the header... — hcarson / detail
  784. Added a re-roll of the c++-14 make_unique feature — hcarson / detail
  785. Added a re-roll of the c++-14 make_unique feature — hcarson / detail
  786. first use of make_unique. — hcarson / detail
  787. ErrorEstimateL2 should now handle p0 or p1 estimation gracefully, and also actually handled that stupid merge conflict — hcarson / detail
  788. Fixed many clang analyzer complaints — galbramc / detail
  789. new MDG directory — arthuang / detail
  790. MDG integrand cell unit test passing — arthuang / detail
  791. changed name of test and added the notebook that generated the L2 error integrand tests — hcarson / detail
  792. forgot an mpi include — hcarson / detail
  793. all_reduce only works on POD not the KahanSum — hcarson / detail
  794. some tweaks — hcarson / detail
  795. interior trace w/ 1d unit test — arthuang / detail
  796. missed a bracket in the merge — arthuang / detail
  797. jacobian ping test added for cell,trace — arthuang / detail
  798. forgot to turn CG LG trace back on — hcarson / detail
  799. added CG sandbox for AD 2D+T problem. — cfrontin / detail
  800. Fixed more analyzer warningw — galbramc / detail
  801. fixed for push, incorporated hugh's mistakenly included preprocessor define. — cfrontin / detail
  802. more hugh fixes plus trueoutput fixes. — cfrontin / detail
  803. SolverInterfaceL2 project actually uses the correct local patch for CG now — hcarson / detail
  804. JEEEEENNNNKIONNNNSSSSS — cfrontin / detail
  805. added SA nitsche — arthuang / detail
  806. jacobian and residual unit tests passing — arthuang / detail
  807. Fixed typo — galbramc / detail
  808. jenkins punched me in the face *again*. — cfrontin / detail
  809. MDG solve works.. needs debugging — arthuang / detail
  810. grumble — cfrontin / detail
  811. VOLUME_WEIGHTED crept through on those last commits. It shouldn't have and this fixes that — hcarson / detail
  812. why oh why did i not save the fixes last time — cfrontin / detail
  813. preprocessor sandbox troubles. — cfrontin / detail
  814. dumb preprocessor stuff fix. — cfrontin / detail
  815. bad include habits fixed. — cfrontin / detail
  816. MDG solves! optimal rates! — arthuang / detail
  817. warning fix. — cfrontin / detail
  818. moved some includes into the cpps — hcarson / detail
  819. removed PrimalNeighbors and added in Vertex — hcarson / detail
  820. Created Vertex Local grid. Have the four cpp, but only Area is actually declared, others would have link errors. Also a super basic unsplit test — hcarson / detail
  821. getting closer to everything compiling — arthuang / detail
  822. moved jacobian calculations into output integrands for Galerkin. bunch of stuff still not working — arthuang / detail
  823. getting closer to passing unit tests.. — arthuang / detail
  824. unit tests updated — arthuang / detail
  825. unit test/compile fixes — arthuang / detail
  826. indentation warning — arthuang / detail
  827. last final last warning bother. — cfrontin / detail
  828. tidying solve3d_CG_AD_ST_toy — cfrontin / detail
  829. Added vertexMode to Local patch, and edgeMap constructor to LocalBase — hcarson / detail
  830. removed the vertex local specialist patch. It might eventually be faster, but the development time would be much much slower — hcarson / detail
  831. MDG jacobianfunctional in place, solves are compiling — arthuang / detail
  832. 3D+T pde stuff should be good to go. — cfrontin / detail
  833. made the central vertex always dof 0. Also added flag for whether patch comes from splitting an edge attached to the vertex — hcarson / detail
  834. MDG compiles fine but doesn't stabilize in advective limit. Hmm... — arthuang / detail
  835. forgot to include a PrimalNeighbors rename — hcarson / detail
  836. MDG working well again.. we have to figure out the Nitsche BCs — arthuang / detail
  837. Some of the updates from hypersonic before merging — blsc / detail
  838. change cb back to 2 to pass Jenkins — arthuang / detail
  839. 2D error order compiling — arthuang / detail
  840. add function hooks to 3DST — arthuang / detail
  841. added function hooks for 1d, 2d spacetime — arthuang / detail
  842. fieldweighted cell integrand for MDG — arthuang / detail
  843. Fix some issues that came up during debug build — blsc / detail
  844. added fieldweighted for MDG trace integrand — arthuang / detail
  845. More clang analyzer warning fixes. — galbramc / detail
  846. more needed function hooks — arthuang / detail
  847. change to isothermal wall BCs, push to hypersonic — arthuang / detail
  848. ughhhhhh more ndconvert troubles — arthuang / detail
  849. add isothermal to RANs BCs — arthuang / detail
  850. working towards the nodal model. Moving to laptop — hcarson / detail
  851. working towards local indicator — hcarson / detail
  852. added the Simplex meta class — hcarson / detail
  853. moving to lab box — hcarson / detail
  854. removed unused typedef — arthuang / detail
  855. Nightly fixes — galbramc / detail
  856. fixed mdg unit tests — arthuang / detail
  857. Propogating changed from develop — blsc / detail
  858. Nightly fixes — galbramc / detail
  859. reordered MDG jac, added error estimate cell — arthuang / detail
  860. merge conflict — hcarson / detail
  861. RANS cases working pretty well, pushing to hypersonic — arthuang / detail
  862. mdg error estimates in place — arthuang / detail
  863. took out adjointState functions (mostly) — arthuang / detail
  864. completed sourceJacobianHACK change. MDG adjoints not quite working... — arthuang / detail
  865. Think I've got all the updates from hypersonic — blsc / detail
  866. 4d cg fields starting up... — cfrontin / detail
  867. error estimate unit test passing, but sandbox case is off... — arthuang / detail
  868. mdg error estimates working! — arthuang / detail
  869. typo — arthuang / detail
  870. cleanup — arthuang / detail
  871. moved into the SANS namespace — hcarson / detail
  872. removed Topology template, used Simplex<TopoDim> instead — hcarson / detail
  873. fixed hack interface — arthuang / detail
  874. added sub-cell step matrix accessor with 1D and 2D unit tests — hcarson / detail
  875. added unit testing for 3D RANS fncs, other cleanup — arthuang / detail
  876. forgot a file — arthuang / detail
  877. sandbox edits — arthuang / detail
  878. complaining about includes? — arthuang / detail
  879. unused variables.. push to tucano for memcheck — arthuang / detail
  880. unit test name change — arthuang / detail
  881. missing definition — arthuang / detail
  882. trying to fix segfault — arthuang / detail
  883. fixed the warning, but there's a segfault somewhere in edgelocal3d... — arthuang / detail
  884. wow that was really dumb but took 4 hours to find — arthuang / detail
  885. putting Nitsche into stabilization object.. stil lin process — arthuang / detail
  886. premerge — arthuang / detail
  887. most things compiling... — arthuang / detail
  888. added affine invariant implied metric calculation — hcarson / detail
  889. nitsche parameter change complete.. things seem to compile ok — arthuang / detail
  890. member variables out of order — arthuang / detail
  891. Added unit tests for gravity term in PDETwoPhase2D + some cleanup — savithru / detail
  892. tweaks to get MDG working for systems — arthuang / detail
  893. fixed checks for parallel — arthuang / detail
  894. whoops switched back — arthuang / detail
  895. hopefully more correct for parallel? — arthuang / detail
  896. Nightly fixes — galbramc / detail
  897. Another nightly fix — galbramc / detail
  898. More nightly fixes — galbramc / detail
  899. Another nightly fix — galbramc / detail
  900. big refactor of the edge solve. Removed the cell group business, and now builds nodal models from the data of the edge solves. No testing quite yet, but it compiles! — hcarson / detail
  901. on the way to 4d-ification of CG... — cfrontin / detail
  902. Hopefully last warning fix — galbramc / detail
  903. more of the same... — cfrontin / detail
  904. minor edits that shouldn't affect anything — arthuang / detail
  905. Merge conflict resolution and formatting issues — blsc / detail
  906. added a cell->node map to the nodalview. Also fixed a bug with edge local not correctly identifying that a node can be common to both vertices without sharing a cell with the edge. Basically a real niche case — hcarson / detail
  907. added hashing function for GroupElemIndex. Uses boost::hash. Can now use unordered_set and unordered_map on GroupElemIndex. Should be faster in those cases where we don't need orderedness, only unique — hcarson / detail
  908. tiny tweaks. uses linspace — hcarson / detail
  909. tweaks to the affInv implied metric option. Also forgot to add the #if for reference step calc — hcarson / detail
  910. added some commented code for inspecting eigenvalues for a 2x2 system. Useful for debugging — hcarson / detail
  911. MDG with discontinuous efld.. does better! — arthuang / detail
  912. working towards error estimate from fine scale — arthuang / detail
  913. minor change to AGLS — arthuang / detail
  914. missed a function update — arthuang / detail
  915. push to hypersonic — arthuang / detail
  916. push to hypersonic — arthuang / detail
  917. few changes to MDG output — arthuang / detail
  918. mdg rans sandbox compiling — arthuang / detail
  919. extra args for output — arthuang / detail
  920. print resid bug fix — arthuang / detail
  921. MDG qp should initialize to zero — arthuang / detail
  922. Commented out some stuff (with developer exceptions), will have to go back to that code — blsc / detail
  923. Updated tolerances — blsc / detail
  924. Removed unused variables — blsc / detail
  925. towards p= 1+ 3D+T AD... — cfrontin / detail
  926. moving to hypersonic — hcarson / detail
  927. Formatting fixes — blsc / detail
  928. fixing some bugs and moving to hypersonic — hcarson / detail
  929. another flag to turn off the metric dumping — hcarson / detail
  930. More vera warnings — blsc / detail
  931. Fixed unit test bug — blsc / detail
  932. changed FrobNormSq formula for MatrixSymS to exploit the symmetry — hcarson / detail
  933. added an inner product for VectorS. Can also handle a range of weighted inner products, with MatrixS, MatrixSymS and a diagonal — hcarson / detail
  934. added some instantiations, also started using the InnerProduct function directly — hcarson / detail
  935. added some 3D+T CG stuff ... work in progress... added 1D+T AD for learning syntax, added a lot of comments. — cfrontin / detail
  936. changed to 1 pt quadrature implied metric calculation. — hcarson / detail
  937. added mean, min, max quality calculator and output in the NLOPT output — hcarson / detail
  938. linked the use of the modified model to the use of the SANS optimizer. No longer compile time flag — hcarson / detail
  939. removed VOLUME_WEIGHTED and added FULL_NODAL. This compile time flag needs to be set to run in the nodal view of the world. Long term this will be the way to go, but it only works in serial presently, so leaving it disabled by default — hcarson / detail
  940. forgot to fix the mpi bit — hcarson / detail
  941. apparently boost::mpi needs its own special minimum and maximum functions... — hcarson / detail
  942. shortened the file by removing unneeded commenting and dead space — hcarson / detail
  943. missing 4d instantiation and an attempt at removing the compiler error. At least I compiled gnu5 and couldn't recreate it... — hcarson / detail
  944. maybe this works? — hcarson / detail
  945. forgot that we can't actually dump 4d grids... — hcarson / detail
  946. changed the exception to a warning — hcarson / detail
  947. forgot to rename them edge tests — hcarson / detail
  948. sigh — hcarson / detail
  949. manually return group and elem to make intel happy. Also reduced the number of shuffles to 3 in the implied test — hcarson / detail
  950. changed the tolerances a little, should now be able to do more shuffles — hcarson / detail
  951. changed the initial condition for the optimization to Log Euclidean. Had a case where affine invariant failed the non-linear solve, so lets just skip that — hcarson / detail
  952. Increasing coverage — blsc / detail
  953. only doing 1 shuffle in 3D because the bloody coverage takes too long — hcarson / detail
  954. I swear... — hcarson / detail
  955. using the max in the implied calculation. The optimization is so much easier/faster — hcarson / detail
  956. added a 3d corner singularity and also made the 3D L2 adapt flag based — hcarson / detail
  957. tweaks to try speed this damn thing up and get it through jenkins — hcarson / detail
  958. correct beta val — hcarson / detail
  959. added more iterations to the AffInv calc, and use the FrobNorm from DLA — hcarson / detail
  960. save the last mesh, explicitly 2D folder, and Affine Invariant metric calculation — hcarson / detail
  961. added the objective of maximizing average quality, this is also not a good one, but unsure what to do... — hcarson / detail
  962. changed the range for the loops, so that the lower dof counts can be run serial — hcarson / detail
  963. More coverage — blsc / detail
  964. Nightly fixes — blsc / detail
  965. changed AffInv to throw exception and revert to Log Euclidean. Also raised the tolerance slightly, as the tolerance is done the norm. Thus sqrt(eps) = 1e-8, so setting tol to 1e-7 — hcarson / detail
  966. fixed betas. reset dump Metric to every iteration. changed 3D to dump the final qfld with the same filename — hcarson / detail
  967. use the max det met — hcarson / detail
  968. Cleaned up well models, modified fixed outflow rate well to use a distributed source term, added a new output function for computing bottom-hole pressure of fixed rate wells — savithru / detail
  969. temp patch for 4D grid io — cfrontin / detail
  970. switch to sine^4 exact solution for solve4d cases. — cfrontin / detail
  971. added outerproduct for VectorS — hcarson / detail
  972. Hopefully faster 3D eigen solves — galbramc / detail
  973. Forgot unit tests — galbramc / detail
  974. Added an enum class for adding quality to the implied metric objective, can do maximize or minimize inverse. Also InverseLengthTensor for calculating the metric. Also fixed up the AffineInvariant calculation to use the correct Gradient descent algorithm from Pennec, thus it actually works now. — hcarson / detail
  975. tweaks for cases — hcarson / detail
  976. much reduced the tolerance for the affine invariant calculation. The non-linear optimization is really not that bad, and it is the most theoretically justifiable metric, so we should use it — hcarson / detail
  977. some typo fixes, some documentary additions, some work on 4d CG field structures. CG not working yet for 4D w/ order > 1. needs some DEVEL EXCEPTIONS before push. — cfrontin / detail
  978. Added the correct output functional for computing the bottom-hole pressure of a fixed-rate well — savithru / detail
  979. a forgotten rename — hcarson / detail
  980. Fix for new 3D eigen value calculation — galbramc / detail
  981. Relaxed a tolerance — galbramc / detail
  982. debugging hell. — cfrontin / detail
  983. Fix intel leak. Better logic checking for refine. — galbramc / detail
  984. moving to hype — hcarson / detail
  985. Updates to track CAD parameters with avro — galbramc / detail
  986. some comments. Also changed the affine invariant calculation to count the number of unconverged solves, record the maximum norm and also increased the tolerance — hcarson / detail
  987. moving branch — hcarson / detail
  988. stylish stylish jenkins — hcarson / detail
  989. Some fixes for avro. Show implied metric cost. — galbramc / detail
  990. changed the advection direction for the Triple BL. Was displaying low-rank structure (>p+1 convergence), suspect because of fluke with rotational symmetry — hcarson / detail
  991. actually using mpi properly hopefully. Also fixed the test for the affine invariant calc — hcarson / detail
  992. make the print to screen scientific so it's actually informative — hcarson / detail
  993. figured out xfield trace coordinates arent matching their element compadres. added unit tests, still not passing though. — cfrontin / detail
  994. Fixes for avro with full potential — galbramc / detail
  995. Fix typo and warning — galbramc / detail
  996. its an unsigned int not a Real you fool — hcarson / detail
  997. Fixes for CAD parameters with avro in parallel — galbramc / detail
  998. Fixed TraceToCellRefCoord_Pentatope. — cfrontin / detail
  999. 4d xfield trace coordinate ordering bug fixed and re-tested. back to working on cg construction. probably some nefarious stuff in 4d-land that needs to be exceptioned out, but currently only im in that region. — cfrontin / detail
  1000. warning fix — cfrontin / detail
  1001. remove debugging ifdef switch. — cfrontin / detail
  1002. Updated Wake+avro tests with curvature — galbramc / detail
  1003. Missed file dump — galbramc / detail
  1004. still tryna pass jenkins. added avro switching. — cfrontin / detail
  1005. ffs ifdef SANS_AVRO again — cfrontin / detail
  1006. forgot to only report unconverged if actually unconverged — hcarson / detail
  1007. fixed tracetocellrefcoord bug side-effects. everything truly broken should have developer exceptions too now. — cfrontin / detail
  1008. setting the values of beta to those espoused in the proof paper — hcarson / detail
  1009. Changed the AD cases to use similar command line interface to the L2 cases. Changed the advection directions to not be aligned with diag. Changed the peclet numbers to be 25 for all cases (unitary advection magnitude), should give reasonable order convergence without wild dof counts. Also changed the exact output calculations to be symbolic, so we can change the advection and diffusion values without having to recalculate — hcarson / detail
  1010. added x vs h and x vs AR dumping for the BL case. Doesn't really seem to show very much though, I think Masa was being cheeky — hcarson / detail
  1011. Unified and cleaned up output functionals for 2D two-phase. Added unit tests for BHP calculations. — savithru / detail
  1012. Changed implied optimization from -Q to 1-Q. Fixes so full potential works with adaptation. — galbramc / detail
  1013. Maybe fixed nightly warning — galbramc / detail
  1014. Fixed build error — galbramc / detail
  1015. Fixed warning — savithru / detail
  1016. nightly fix — cfrontin / detail
  1017. One more — savithru / detail
  1018. A few more compile fixes — galbramc / detail
  1019. vera fix 2.0 — cfrontin / detail
  1020. VERA FFS A SEMICOLON?! — cfrontin / detail
  1021. Put CostModel integration order back — galbramc / detail
  1022. Added elementEdges function to get runtime edge maps — galbramc / detail
  1023. Updates for new avro file layout — galbramc / detail
  1024. Fix for clang — galbramc / detail

#237 (Jun 8, 2019, 1:52:07 AM)

  1. added to-do — shunz / detail
  2. Refactored two system tests.  Added options to change transition model parameters on the fly — shunz / detail
  3. Fixed a bug/feature in an unimportant if statement — shunz / detail
  4. Cleanup — shunz / detail
  5. Cleaned up deprecated parts.  Fixed LF flux.  Refactored transition front source/flux.  Editted printout — shunz / detail
  6. Fixed uninitialized data in Flux_mitState_Nitsche for pure advective. — galbramc / detail
  7. Updated pyrite file after updating PDEIBL LFflux related stuff — shunz / detail
  8. Removed variable length arrays — galbramc / detail
  9. Replaced turbulent BL TS wave growth rate with the previous formulation of interpolating over turbulent sub-element, which makes cd vs ntcrit relation smooth.  Updated pyrite files for free transition — shunz / detail
  10. Minor refactoring — shunz / detail
  11. Fixed LFflux for IBLUniField.  Refactored test case and updated pyrite file — shunz / detail
  12. Missed a few variable length arrays — galbramc / detail
  13. One more warning — galbramc / detail
  14. Refactored PDEIBLUniField member field to allow for parameter ntcrit sweep.  Updated initial solution guess to be based on an existing IBL solution. — shunz / detail
  15. Fixed warnings — galbramc / detail
  16. Better cleanup of coverage information — galbramc / detail
  17. Don't build sandbox with nightly — galbramc / detail
  18. Clang analyzer should still build sandbox — galbramc / detail
  19. Revived gradation penalty. Needs lots of tweaks and studying — galbramc / detail
  20. Added unit test for 2D+T implementations. — cfrontin / detail
  21. Working on pentatope tests. — cfrontin / detail
  22. Changed scaling factor for objective — ursachi / detail
  23. Added 1D and 2D includes — ursachi / detail
  24. Updates for latest version of AFLR — galbramc / detail
  25. Gradation still needs more work... — galbramc / detail
  26. Fix compiler error — galbramc / detail
  27. Fixed arry bound typo in test — galbramc / detail
  28. more tests for orientations of tets in 4d — pcaplan / detail
  29. lingering changes — pcaplan / detail
  30. DG fields in 4d + unit tests — pcaplan / detail
  31. silly typo — pcaplan / detail
  32. can only use KF triangulation if avro is hooked in — pcaplan / detail
  33. Working on unit grids... — cfrontin / detail
  34. transferring — arthuang / detail
  35. Another formatting fix. — cfrontin / detail
  36. Another formatting fix. — cfrontin / detail
  37. minor editting — shunz / detail
  38. added modified diffusion matrix — arthuang / detail
  39. minor mod to proj stabilization — arthuang / detail
  40. Fix includes. — cfrontin / detail
  41. pre merge — hcarson / detail
  42. add proj stab matrices for 1DAD, stokes — arthuang / detail
  43. taking out some comments — arthuang / detail
  44. Taking the warning machete to things. — cfrontin / detail
  45. Refactored test case input — shunz / detail
  46. Udpates to sansLIPAIM to work with new CAPS dataTransfer setup — galbramc / detail
  47. system test for DG with pentatopes — pcaplan / detail
  48. Minor update — shunz / detail
  49. Added an option of wake ctau_eq but not used — shunz / detail
  50. moving to hyper branch — hcarson / detail
  51. MCMC flat plate for class — hcarson / detail
  52. forcing function for heating — hcarson / detail
  53. use SANS convention for trace orientation instead of the one used in avro — pcaplan / detail
  54. 1Ptope test working, fixed assumptions on nodal definitions. — cfrontin / detail
  55. fixed GLS? — arthuang / detail
  56. edit cmake list — arthuang / detail
  57. 2Tope unitgrid working, testcase working. — cfrontin / detail
  58. Turned off tesseract for push. — cfrontin / detail
  59. Light LIP tecplot files — galbramc / detail
  60. Smaller tecplot file for LIP — galbramc / detail
  61. Fix scoping issues. — cfrontin / detail
  62. Fixed warnings — galbramc / detail
  63. Added comment with origin of SVD3 algorithm — galbramc / detail
  64. handmade unit grid: 1 pentatope with 5 pentatope neighbours — pcaplan / detail
  65. allow all orientations of traces (1 to 12) in checkGrid — pcaplan / detail
  66. local grid extraction for pentatopes — pcaplan / detail
  67. cell to trace connectivity for pentatopes — pcaplan / detail
  68. finish implementation of element associativity of pentatopes — pcaplan / detail
  69. unit tests for local grid extraction around pentatopes (single pentatope and single pentatope surrounded by neighbours) — pcaplan / detail
  70. other minor changes — pcaplan / detail
  71. gradprojection working — arthuang / detail
  72. verified optimal order for 1DAD grad projection — arthuang / detail
  73. comm rank = 0 using xfield_lagrange — pcaplan / detail
  74. 24Ptope working, passing checkGrids(). test in progress. — cfrontin / detail
  75. remove duplicate unit grids in favour of handmade ones — pcaplan / detail
  76. warning fix — pcaplan / detail
  77. warning fix — pcaplan / detail
  78. 24Ptope unit grid working, tested and working. — cfrontin / detail
  79. commit so it ought to run for ben? — hcarson / detail
  80. Add duration to each build in Jenkins email. — galbramc / detail
  81. tweaks and the forcing — hcarson / detail
  82. full rank diffusive stabilizaiton — arthuang / detail
  83. actually making it not work — hcarson / detail
  84. changed the try catch for implied metric optimization to doing nothing rather than excepting. Also tweaks to MCMC file — hcarson / detail
  85. tweaks and removed a bunch of heap memory allocations — hcarson / detail
  86. added options to the quadratic — hcarson / detail
  87. more mods to projection stabilization — arthuang / detail
  88. undoing a lot of sketchy things — arthuang / detail
  89. rolling back more sketchy stuff — arthuang / detail
  90. mods for running with avro — hcarson / detail
  91. comment typos — hcarson / detail
  92. switching over to avro — hcarson / detail
  93. everything compiles, gotta track down unit tests — arthuang / detail
  94. getting unit tests to pass — arthuang / detail
  95. Reworked build of parmetis. refine uses parmetis. added avro build. — galbramc / detail
  96. minor edits to edge local unit tests — arthuang / detail
  97. Fixes for avro and refine — galbramc / detail
  98. Suppress warning — galbramc / detail
  99. Parallel Field4D test fixes. Give refine more time. — galbramc / detail
  100. Relaxed tolerance for intel — galbramc / detail
  101. Don't run ErrorOrder_4D in parallel — galbramc / detail
  102. Updated refine build — galbramc / detail
  103. Updated refine check — galbramc / detail
  104. Nightly build fixes... plus a stopgap ifdef until the SVDless 4D normal vector is done. — cfrontin / detail
  105. Reduce run time of 4D error order check — galbramc / detail
  106. Relaxed another tolerance — galbramc / detail
  107. trying out some edge stabilization — arthuang / detail
  108. MCMC things and got the temp sensors working — hcarson / detail
  109. Remove files written by avro — galbramc / detail
  110. Dissable refine testing for now — galbramc / detail
  111. Added memcheck to parmetis build — galbramc / detail
  112. Ignore external parmetis — galbramc / detail
  113. added hessian to interior trace — arthuang / detail
  114. edge stabilization working-ish? — arthuang / detail
  115. changing branch — hcarson / detail
  116. MC for running on hypersonic — hcarson / detail
  117. ready for running on hypersonic — hcarson / detail
  118. Generalized valgrind suppression — galbramc / detail
  119. moving to hypersonic again — hcarson / detail
  120. egads coords must have 3 dimensions even in 2d — pcaplan / detail
  121. the final files from the project — hcarson / detail
  122. forgot a function — hcarson / detail
  123. pushing to tucano — arthuang / detail
  124. Suppressed CMakeLists errors. [TBD] — shunz / detail
  125. Fixed panel metod tests — shunz / detail
  126. AFLR4 updates and some Jenkins scripts — galbramc / detail
  127. Link tetgen before avro — galbramc / detail
  128. instantation of elementlocal version of local splits for 4d...unit test will fail because the result is different than savi's convention — pcaplan / detail
  129. missing definitions for elementlocal & edgelocal — pcaplan / detail
  130. some instantiations of savi's method for doing local splits — pcaplan / detail
  131. xfield_lagrange method of doing local splits...still debugging...will fix later... — pcaplan / detail
  132. Refactoring.  Patched unit tests — shunz / detail
  133. More unit tests — shunz / detail
  134. added unit tests — shunz / detail
  135. Fixed unit tests — shunz / detail
  136. Fixed IBL unit tests — shunz / detail
  137. Added unit test.  Turned off unused methods. — shunz / detail
  138. Fixed a bug in CMakeLists: use of out-of-scope variable — shunz / detail
  139. Fixed a bug in cmake files that only appear when building with Xcode — shunz / detail
  140. Refactored ping test input array type.  Fixed IBL-related 4x4 block system ping tests.  Added missing MPI-related method definitions for pure virtural methods — shunz / detail
  141. Relocated code into SANS_MPI macros; otherwise, errors are raised about "member access to incomplete type" — shunz / detail
  142. Verified/fixed/cleaned IBL system tests with transition (full upwind). — shunz / detail
  143. Fixed duplicate naming of boost test suite — shunz / detail
  144. Relaxed pyrite tolerance — shunz / detail
  145. Updated forced-transition pyrite files after the bug fix in commit b30121ee5531d91e84aac94fbdab6462f458f4f8 — shunz / detail
  146. Turned off file dump — shunz / detail
  147. Fixed formatting — shunz / detail
  148. Fixed empty traling line — shunz / detail
  149. Fixed DG and HDG AES tests for uncoupled IBL — shunz / detail
  150. Fixed formatting — shunz / detail
  151. Reverted changes to (viscous) HDG stuff: those abandoned changes treated qfld and afld as a single bundle field — shunz / detail
  152. Update AlgebraicEquationSet_HDGAdvective_Advection_btest.cpp — shunz / detail
  153. Fixed one more test affected by ping test refactoring.  Fixed formatting and screen output — shunz / detail
  154. Fixed another system test affected by IBL Qauxv interpreter refactoring — shunz / detail
  155. Update ErrorOrder_1D_HDGAdvective_Advection_btest.cpp — shunz / detail
  156. Fixed warning and missing instantiation — shunz / detail
  157. Added an instantiation just for completeness, although it is no longer used — shunz / detail
  158. moving towards adjoint GLS — arthuang / detail
  159. Cleaned sandbox cases — shunz / detail
  160. relaxed tolerances for clang_release — shunz / detail
  161. Suppressed output — shunz / detail
  162. Fixed bugs in CMakeLists — shunz / detail
  163. Fixed HDG advection tests — shunz / detail
  164. Removed the pure advection test case using (viscous) HDG machinery — shunz / detail
  165. parallel outputs in galerkin solver interface, AGLS error estimation fixed? — arthuang / detail
  166. Refactored halving line search and fixed unit tests — shunz / detail
  167. Fixed memory errors — shunz / detail
  168. Relaxed tolerance for intel — shunz / detail
  169. relaxed tolerances for intel18 — shunz / detail
  170. Relaxed timeout limits — shunz / detail
  171. Speed up unit tests in response to Jenkins timeout — shunz / detail
  172. Fixed typo — shunz / detail
  173. Relaxed tolerance for gnu48 — shunz / detail
  174. Tried to fix timeout on Jenkins testing (coverage_clang reynolds) — shunz / detail
  175. Reverted CMakeLists to see if TIMEOUT is set properly this time on Jenkins — shunz / detail
  176. minor refactoring — shunz / detail
  177. Refactored CMakeLists for Xcode build — shunz / detail
  178. Refactored Newton solver — shunz / detail
  179. Minor fix — shunz / detail
  180. Fixed warnings — shunz / detail
  181. Added IBL max update fraction — shunz / detail
  182. Enabled under-relaxed Newton update for coupled 4x4 block system of IBL with free transition. — shunz / detail
  183. Refactor of avro XField interface — galbramc / detail
  184. Consistent logic for setting cmake testing timout property — galbramc / detail
  185. Fixed refine interface change — galbramc / detail
  186. Fix ifdef when not using avro — galbramc / detail
  187. More fixes to deal with avro — galbramc / detail
  188. Minor cleanup — galbramc / detail
  189. Added unit tests for IBL updateFraction — shunz / detail
  190. Upgrade PETSc — galbramc / detail
  191. More avro and PETSc tweaks — galbramc / detail
  192. I don't understand why dl library is needed to link a static library... — galbramc / detail
  193. Fix for refine check — galbramc / detail
  194. Suppress compiler warning when building PETSc — galbramc / detail
  195. Fix for avro with 4D — galbramc / detail
  196. Enable refine testing again — galbramc / detail
  197. Updated copyright date to 2019 — galbramc / detail
  198. Updated copyright date to 2019 — galbramc / detail
  199. dimension-independent local splits — pcaplan / detail
  200. timing tests show dim-independent implementation on par with savithru's impl...tried to debug hugh's local xfield in primal mode but something is wrong...unit tests on the way — pcaplan / detail
  201. adding stabilized error estimation infrastructure — arthuang / detail
  202. more playing with AGLS — arthuang / detail
  203. minor edits — arthuang / detail
  204. reconciling merge conflicts and some tweaks — hcarson / detail
  205. license updates — hcarson / detail
  206. fixes to match avro — hcarson / detail
  207. forgot to add the avro defined precompile check — hcarson / detail
  208. relaxed tolerances and forgot to split world — hcarson / detail
  209. tweaking tol again... — hcarson / detail
  210. another tweak... — hcarson / detail
  211. cleanup of localpatch + commenting — pcaplan / detail
  212. copyright — pcaplan / detail
  213. more copyright — pcaplan / detail
  214. Updates for MOESS optimizations. Still needs more work. — galbramc / detail
  215. Instantiations for 4D AD solve. — galbramc / detail
  216. A few fixes — galbramc / detail
  217. Compile fixes — galbramc / detail
  218. More instantiations for 4D — galbramc / detail
  219. removed anachronistic definition of primal grid. Primal grid now matches the behavior of the normal DG grids. Unit tests have just been turned off in the meantime — hcarson / detail
  220. make sure mpi is init'd before calling rank by actually running in parallel — pcaplan / detail
  221. revert back to dual — pcaplan / detail
  222. ifdef SANS_AVRO for tests with CKF triangulation — pcaplan / detail
  223. changed to Dual in the system test — hcarson / detail
  224. attempted to fix nightly tests — shunz / detail
  225. Relaxed timings, fixed warning — galbramc / detail
  226. Updated pyrite files to fix nightly tests — shunz / detail
  227. Moved timing test into sandbox — galbramc / detail
  228. Cleanup of refine interface with auto memory management. — galbramc / detail
  229. Modest progress on instantiations. — cfrontin / detail
  230. Fix include — galbramc / detail
  231. 4D box unit grid grandfathered out of XField_KuhnFreudenthal. — cfrontin / detail
  232. added fix to 3D — hcarson / detail
  233. removed the separate 4D file, just added an instantiate at the end of 3D — hcarson / detail
  234. p=7 led to error close to machine zero, which seemed to cause touble to nightly ErrorOrder test.  Cut back p from 7 to 6 — shunz / detail
  235. p=6 still too high for pyrite test for ErrorOrder — shunz / detail
  236. Attempted to warning "use of zero-allocated memory" — shunz / detail
  237. Some cleanup in the sandbox. Added 2D L2Project adaptation — galbramc / detail
  238. Added tecplot dump for metric fields. Other small fixes — galbramc / detail
  239. Changed floor to round for generating new 1D mesh — ursachi / detail
  240. Minor refactoring — shunz / detail
  241. Compile fixes and more dependency warning suppressions — galbramc / detail
  242. Add dl library for avro — galbramc / detail
  243. Replaced nt transport equation with G variable as in SciTech paper, although the results are equivalent — shunz / detail
  244. bits and pieces — hcarson / detail
  245. added linear args and a test — hcarson / detail
  246. just wanna get my stuff in the repo — pcaplan / detail
  247. Files for parallel periodic XField2D_Box_Triangle_Lagrange (Issues need to be fixed) — kug46 / detail
  248. retrieve edge indices and sub elems from split — pcaplan / detail
  249. ref coordinates on split sub cells — pcaplan / detail
  250. Added a layer of abstractions when evaluating fluxes, sources etc. in IBL pde class — shunz / detail
  251. Fixed formatting... previously went under the radar since vera++ was not installed locally... — shunz / detail
  252. inst of some 4d adaptation things — pcaplan / detail
  253. Added scalar and dot product fixes for MatrixSymS — galbramc / detail
  254. Working on 3d ST... — cfrontin / detail
  255. Enabled smooth laminar/turbulent blending — shunz / detail
  256. Fixed SVD calculation for normal vector for 4D tet. — cfrontin / detail
  257. Scrubbed some comments. — cfrontin / detail
  258. edits to gls error estimation — arthuang / detail
  259. unit tests for basis function ref elem split — pcaplan / detail
  260. 4d adapt? — pcaplan / detail
  261. Fixed intel errors by relaxing tolerance and reconciling a missing pyrite file specialized for intel MKL — shunz / detail
  262. added a Field weighted stabilized CG nodal estimate integrand test in 2D — hcarson / detail
  263. comment — hcarson / detail
  264. Continued work on ElementXField implementations. — cfrontin / detail
  265. Vera fixes, COPYRIGHT fixes, and some avro preprocessor fixes. — cfrontin / detail
  266. Updates for 2D L2 Projection sandbox test — galbramc / detail
  267. Updates for 1D L2 Projection sandbox test — galbramc / detail
  268. Clearing out high-level exceptions whose low-level implementations are done. — cfrontin / detail
  269. Added last bits of ADST4D case, should run (?) now. — cfrontin / detail
  270. Added new trace free step matrix error model. Not enabled. — galbramc / detail
  271. added a 2D error estimate test, and asserted assumption on basis function type — hcarson / detail
  272. Fix. — cfrontin / detail
  273. fixed the estimate vary tests — hcarson / detail
  274. notebook with Double BL exact solutions — hcarson / detail
  275. forgot the copyright change — hcarson / detail
  276. Normalize MOESS optimization with nlopt — galbramc / detail
  277. Fixed undefined reference — galbramc / detail
  278. Fixed a bug in laminar/turbulent blending function — shunz / detail
  279. ifdef SANS_AVRO requirements in unit tests. — cfrontin / detail
  280. removed the scp to devastator. Should be useful for everyone now — hcarson / detail
  281. forgot to change a quadratic function explicit constructor — hcarson / detail
  282. undoing a print — hcarson / detail
  283. EQUILATERAL PENTATOPE coordinates + added unit volume check in unit test to catch this — pcaplan / detail
  284. unit test for split ref step matrix on pentatopes + generating matlab script — pcaplan / detail
  285. unit tests for error model — pcaplan / detail
  286. 4D L2 ERROR ADAPTATION WORKS...cleaning up........ — pcaplan / detail
  287. Added new MOESS optimization without global FrobNorm — galbramc / detail
  288. Forgot CMake file — galbramc / detail
  289. CG artificial viscosity in 2D — blsc / detail
  290. Small fix for cmake summary — galbramc / detail
  291. Weekly test fixes — galbramc / detail
  292. Modified AlgEqSet, IntegrandInteriorTrace and 2D DGAdvective toy for Parallel 2D Periodic Grids — kug46 / detail
  293. Towards parallel PETSc/TAO — galbramc / detail
  294. Refactored intermittency calculation — shunz / detail
  295. Generailized Projection to Qauxi to handle blended intermittency. — shunz / detail
  296. Trying to bump coverage. — cfrontin / detail
  297. Some cleanup of logEuclidian cost — galbramc / detail
  298. Added lagrange P1 to the exception — hcarson / detail
  299. copywrite update for some files — arthuang / detail
  300. Various small fixes — galbramc / detail
  301. added a Tanh2 function based on Loseille's Tanh3 — hcarson / detail
  302. Updated Embedding unit test for quadrature integration — galbramc / detail
  303. Reverted to binary intermittency as default — shunz / detail
  304. Relaxed tolerance for intel compiler.  Restored default to binary intermittency for existing tests — shunz / detail
  305. Trying to get coverage... — cfrontin / detail
  306. Tests added + un-tested, unused additions removed. — cfrontin / detail
  307. Added comments and made sure ADST4D case is ready for parallelization. — cfrontin / detail
  308. More parallel fixes. — cfrontin / detail
  309. Relaxed torleranc for gnu48 — shunz / detail
  310. More parallel fixes. — cfrontin / detail
  311. Added regularized point source to accommodate potential co-existence of free and forced transition in the captured transition treatment — shunz / detail
  312. Updated ADST3D cases (solve and adapt) for avro and MPI use. — cfrontin / detail
  313. Forgot an MPI redefine. — cfrontin / detail
  314. jk MPI fix actually this time. — cfrontin / detail
  315. Minor fix — galbramc / detail
  316. Continued avro- and MPI-ification. — cfrontin / detail
  317. Unit testing fixes. — cfrontin / detail
  318. Fixed warning. — cfrontin / detail
  319. Fixed fstream initializer. — cfrontin / detail
  320. Warning cleanup... — cfrontin / detail
  321. Fixes towards parallel+periodic — galbramc / detail
  322. Coverage improvement... — cfrontin / detail
  323. cleanup of interface to match savithru's — pcaplan / detail
  324. instantiation of 4d savithru splits (technically the extraction works because that's what i started with but the actual split does not) — pcaplan / detail
  325. Fixes for running parallel DG with periodic BCs — galbramc / detail
  326. Removed adapt4d skeleton from build. — cfrontin / detail
  327. Added instantiation — galbramc / detail
  328. ffs — cfrontin / detail
  329. instantiate SVD (with error), XField_Local calls XField_LocalPatch in 4d which local_split_patch is turned off — pcaplan / detail
  330. ifdef sans avro in sandbox file — pcaplan / detail
  331. instantiation of new MOESS SANS optimizer for 4d — pcaplan / detail
  332. experimenting w p1 adjoint — arthuang / detail
  333. adapt3d change in api — pcaplan / detail
  334. relaxed tolerance for system test — pcaplan / detail
  335. publicize error model functions...still not sure why — pcaplan / detail
  336. added note about protected methods for error model class — pcaplan / detail
  337. missing operator for 1d function — pcaplan / detail
  338. unprotected from SANS_AVRO avro namespace use — pcaplan / detail
  339. rename file to avoid copyright check — pcaplan / detail
  340. deleted file — pcaplan / detail
  341. Only have vera look at .cpp and .h files — galbramc / detail
  342. SANS_CHECK_CLOSE not BOOST_CHECK_EQUAL for floats, come on philip — pcaplan / detail
  343. bug != in shock capturing — arthuang / detail
  344. revert back to formulation — arthuang / detail
  345. add expt stab (no-op) to 2DAD — arthuang / detail
  346. Added a C2 continuous smooth abs — hcarson / detail
  347. fix intel compiler warning — pcaplan / detail
  348. add pending changes in local patch header — pcaplan / detail
  349. Run SANS_Commit in parallel — galbramc / detail
  350. Cannot specify format for 'time' on all systems — galbramc / detail
  351. Updates to SANS_Commit.sh — galbramc / detail
  352. One more parallel fix — galbramc / detail
  353. Forgot to run 'make all' — galbramc / detail
  354. Fix make warning for now — galbramc / detail
  355. dev exceptioned code required only for 4d tecplot. — cfrontin / detail
  356. added a C2 smoothabs and matlab file that generated — hcarson / detail
  357. actually got the smoothmax1, smoothmax2 functions work, also added implicitly defined smoothmin1 and smoothmin2 — hcarson / detail
  358. merge fix — cfrontin / detail
  359. merge fix 2 — cfrontin / detail
  360. working on new error models — hcarson / detail
  361. ASExpCombo function for testing L2 — hcarson / detail
  362. Revive Adapt L2Project — galbramc / detail
  363. partial cleanup of local patch before supporting CG patches — pcaplan / detail
  364. Removed PBAM — galbramc / detail
  365. fix for jenkins, smoothmax2, tweaks to SANS opt and the VectorX hack to work with Phil — hcarson / detail
  366. unparallelized a test, there's a bug in P4 Hierarchical parallel — hcarson / detail
  367. turning the P3 and P4 unsplit tests off again. There's something weird and MPI-ish going wrong here — hcarson / detail
  368. Missed one include — galbramc / detail
  369. Missed one more file — galbramc / detail
  370. more cleanup of local patch — pcaplan / detail
  371. Suppress valgrind avro+intel strange warnings — galbramc / detail
  372. Broke up DGBR2lib trying to reduce compile time — galbramc / detail
  373. pre merge — hcarson / detail
  374. support for CG local solves with XField_LocalPatch — pcaplan / detail
  375. forgot to propagate changes in function names to tests — pcaplan / detail
  376. turnon off local patch splits for jenkins — pcaplan / detail
  377. silence warning — pcaplan / detail
  378. Switched implied metric optmizer to MMA — galbramc / detail
  379. agls tweaks — arthuang / detail
  380. Relaxed tolerance — galbramc / detail
  381. complete unit tests for xfield local patch...still need some work on CG tests — pcaplan / detail
  382. merge conflict — hcarson / detail
  383. a stupid bug — hcarson / detail
  384. changes to optimizers, and also turning the modified model back off — hcarson / detail
  385. Fix work weekly — galbramc / detail
  386. Weekly suppression and revived cotire — galbramc / detail
  387. Fixed the last error. — galbramc / detail
  388. Fixed a warning — galbramc / detail
  389. Added option to use CG field for PTC time step — galbramc / detail
  390. Changed the span of the SANS frob norm penalty function — galbramc / detail
  391. unit tests for DG/CG patches — pcaplan / detail
  392. remove print_inline — pcaplan / detail
  393. Conical method of stroud added, and working. Still needs integration into pentatope. — cfrontin / detail
  394. Added a ego map to EGTessModel that maps from All egos to Unique egos — galbramc / detail
  395. add xfield for full potential code using avro — pcaplan / detail
  396. Integrated Stroud into 4D quadrature. — cfrontin / detail
  397. cleanup avro wake3d — pcaplan / detail
  398. Fixed compile error — galbramc / detail
  399. Fixed another compile error — galbramc / detail
  400. work towards high-order support for local patch split — pcaplan / detail
  401. getting unit tests to pass... — arthuang / detail
  402. fixing merge conflicts — arthuang / detail
  403. Fix up PseudoTime_btest — galbramc / detail
  404. Fixed btest memory leak. — cfrontin / detail
  405. Improved stroud testing. — cfrontin / detail
  406. experimenting with an element based local solve — arthuang / detail
  407. BCNone is dead. Long live BCNone. — hcarson / detail
  408. New Implied Metric optimizer based on logM. Various other small fixes. — galbramc / detail
  409. elemID must be global — pcaplan / detail
  410. support for high-order local patch — pcaplan / detail
  411. ifdef avro — pcaplan / detail
  412. Updates for CG 3D Euler with shock capturing and 2D RANS — blsc / detail
  413. multiple def from copy paste — pcaplan / detail
  414. uninitializaed data fix (typo) — cfrontin / detail
  415. changes to error model interface for high-order local splits — pcaplan / detail
  416. Removing problematic instantiations due to wall distance parameter with artificial viscosity for RANS — blsc / detail
  417. add info as to which type of field is being sampled — pcaplan / detail
  418. Removing code from BCEuler3D_mitState.h which was ifdef'd out — blsc / detail
  419. added integer template for equation number — hcarson / detail
  420. typo in avro wake — pcaplan / detail
  421. specialized wake model not defined without avro — pcaplan / detail
  422. added an ND test of the BCNone with and without useFluxViscous — hcarson / detail
  423. Galerkin folder passes — hcarson / detail
  424. added the downcast to NoneBC to extract the boolean — hcarson / detail
  425. converted HDG over to the new Nones — hcarson / detail
  426. Updated implied metric for TAO. Fixed a number of floating point problems. — galbramc / detail
  427. More robust testing, compiler warning silencing. — cfrontin / detail
  428. dont inherit from xfield_avro if not defined — pcaplan / detail
  429. still missing some ifdef — pcaplan / detail
  430. Various compile fixes. Generalized Adapt2D_Mesh_Optimize for all mesh generators. — galbramc / detail
  431. Missed one — galbramc / detail
  432. Warning fixes — galbramc / detail
  433. killed a few more BCTypeNone references, just plugging away — hcarson / detail
  434. pre merge — hcarson / detail
  435. Removed the BCNoneUniField — hcarson / detail
  436. Added switching for expensive PI quadrature/low-cost NI quadrature. Fixed associated tests to get correct convergence rates. — cfrontin / detail
  437. committing sandbox pre-merge — arthuang / detail
  438. someone forgot to actually use the W and B typedefs — hcarson / detail
  439. missing include — hcarson / detail
  440. fixed the CMakeLists.txt — hcarson / detail
  441. made BCNone_AV to do with annoying ArtVisc feature — hcarson / detail
  442. missing includes and last bit — hcarson / detail
  443. fixed typo: derived to dervied — hcarson / detail
  444. vera slap correction — hcarson / detail
  445. Fixed one more BCNone — galbramc / detail
  446. forgot a file — hcarson / detail
  447. Removing more of the block artificial viscosity stuff in 2D and unit test updates — blsc / detail
  448. More merge conflicts — blsc / detail
  449. More merge conflict resolution — blsc / detail
  450. Fixed memory leak. — cfrontin / detail
  451. used quadrature cache for L2 projection — pcaplan / detail
  452. fix for order = 0 integration — pcaplan / detail
  453. New cost target for SANS MOESS optimizer. Lots of work towards avro+Wakes. — galbramc / detail
  454. Fixed typo — galbramc / detail
  455. Minor fixes — galbramc / detail
  456. One more typo — galbramc / detail
  457. Unit test updates — blsc / detail
  458. Helps to use consistent array size — galbramc / detail
  459. Updates to jenkins scripts — galbramc / detail
  460. Segregating MeshAdapter — galbramc / detail
  461. Missing instantiation — blsc / detail
  462. Fixed mistake in BuildAVRO — galbramc / detail
  463. Fixes for 3D CG case with artificial viscosity — blsc / detail
  464. Fixed compile issues related to separating dimensions — galbramc / detail
  465. Initializing variables to fix some compiler warnings — blsc / detail
  466. LU factorization on processors so PETSc solves reliably — blsc / detail
  467. Missed a few — galbramc / detail
  468. IRS updates — blsc / detail
  469. Fix for gnu 4.8 — galbramc / detail
  470. Refactored tecplot output to reduce link time — galbramc / detail
  471. Forgot files — galbramc / detail
  472. Fixed muliple instantiations — galbramc / detail
  473. pre merge — pcaplan / detail
  474. Syncing with hypersonic — blsc / detail
  475. reverting a dead end — arthuang / detail
  476. Adapt4D de-mothballing. — cfrontin / detail
  477. Fixed 'potential' memory leak problem by putting frees in same scope as creation. — cfrontin / detail
  478. Suppress cppcheck bug — galbramc / detail
  479. tweaked AGLS setup, hope this one gets through!! — arthuang / detail
  480. AGLS formulation w/ correction getting good rates! push to laptop, need to fix unit tests — arthuang / detail
  481. unit tests should be working... — arthuang / detail
  482. pre merge — hcarson / detail
  483. Another cppcheck suppression — galbramc / detail
  484. clean up on choosing reSolve groups — hcarson / detail
  485. some clean up — hcarson / detail
  486. added a virtual method for computing Initial Error. The default version has the overhead of a solve associated, whereas the SolverInterface version has the cheaper version that avoids the solve and thus is more robust — hcarson / detail
  487. parameter for avro to allow for interior boundaries needed for wake models — pcaplan / detail
  488. unit tests ready to go — arthuang / detail
  489. Adding 4D Legendre basis for Adapt4D + error estimates. — cfrontin / detail
  490. cmake addition of 4d legendre... still not finished though. — cfrontin / detail
  491. oops — cfrontin / detail
  492. don't use Philip's split for now — arthuang / detail
  493. add nb for output correction — arthuang / detail
  494. got rid of a unnecessary sandbox, updated other test — arthuang / detail
  495. One less call to checkGrid for curved LocalPatch — galbramc / detail
  496. More IRS stuff — blsc / detail
  497. moved metric conformity to separate file — pcaplan / detail
  498. tried to assess metric conformity and re-adjust target cost but simpler to just ask the mesher and have inner loop on adaptations to control target cost — pcaplan / detail
  499. pushing to hypersonic — arthuang / detail
  500. some fixes to actually use the volume factor... — pcaplan / detail
  501. new elemental error estimate for CG, not especially tested but seems to be ok — hcarson / detail
  502. more tweaks to cases — hcarson / detail
  503. Add static caching for pentatope quadrature. — cfrontin / detail
  504. Set edge length bound = 1 for 1D — ursachi / detail
  505. Added exponential and maxcubic functions — ursachi / detail
  506. 1D test cases — ursachi / detail
  507. std::stringstream has a surprisingly expensive constructor — galbramc / detail
  508. Fixed formatting — galbramc / detail
  509. Added missing copyright — galbramc / detail
  510. Added missing includes — galbramc / detail
  511. include set — pcaplan / detail
  512. merge — pcaplan / detail
  513. still default to savithru's local split — pcaplan / detail
  514. protect quadrature tests with use_conical — pcaplan / detail
  515. Deleted unnecessary includes — ursachi / detail
  516. changes to make avro grids compile again — hcarson / detail
  517. cleanup and forgotten files — hcarson / detail
  518. Progress towards avro+Wakes. Added intel19 to jenkins env. — galbramc / detail
  519. Quadrature fix. — cfrontin / detail
  520. Added Legendre4D Bases. — cfrontin / detail
  521. Adapt4D ADST should *start*. — cfrontin / detail
  522. Remove files dumped by avro — galbramc / detail
  523. Fixed missing parameter checks — galbramc / detail
  524. New CFL evolution logic (ifdef'd out) — blsc / detail
  525. Missed a file — blsc / detail
  526. Improved speed of XField_LocalPatch — galbramc / detail
  527. Allow longer time for slow test — galbramc / detail
  528. debug CG local patch — pcaplan / detail
  529. Update UniqueTrace to use UniqueElem — galbramc / detail
  530. forgot a multiply — blsc / detail
  531. Added 4D pentatope Legendre unit tests. — cfrontin / detail
  532. Complete Legendre 4D test. — cfrontin / detail
  533. Actually this time. — cfrontin / detail
  534. Universalized legendre max order, refactored variable. — cfrontin / detail
  535. first errormodel additions. — cfrontin / detail
  536. Updating the delta wing case — galbramc / detail
  537. Fixed compile errors — galbramc / detail
  538. reference element tested and ready to fly. — cfrontin / detail
  539. More compile fixes for DeltaWing. avro works again with it. — galbramc / detail
  540. Logic updates for PTC to hypersonic — blsc / detail
  541. Skip blank backtrace numberes. Lots of work towards avro+Wakes — galbramc / detail
  542. Fixed test for lagrange basis function spacetime, moving coords to inherited class from base class. — cfrontin / detail
  543. warning fix, you dumbass\! — cfrontin / detail
  544. Fixed up hashing and added unit tests for UniquElem — galbramc / detail
  545. fixed cross-machine tolerancing issue. — cfrontin / detail
  546. IRS updates — blsc / detail
  547. Lots of fixes for avro+Wakes — galbramc / detail
  548. Don't dump file — galbramc / detail
  549. pre merge — hcarson / detail
  550. Reduce testing in MOESS_Gradation_Optimizer_NLOPT_btest — galbramc / detail
  551. new and improved AGLS formulation — arthuang / detail
  552. premerge — pcaplan / detail
  553. Use operator() to modify avro topologyDup — galbramc / detail
  554. Updated linesearch with missing status variables — blsc / detail
  555. Add backtrace info to singular matrix. Enable VERA_ERROR for all builds with SANS_Commit.sh — galbramc / detail
  556. Quadrature fixes — galbramc / detail
  557. Removed unnecessary line — galbramc / detail
  558. Add vera to CentOS and Rhel. Undo some fixes. — galbramc / detail
  559. Added boost to LD_LIBRARY_PATH on CentOS — galbramc / detail
  560. Guard against negative nodal metrics from ImpliedMetic optimizer — galbramc / detail
  561. Updated avro and refine build to work with .tgz files — galbramc / detail
  562. Updated build of lapack and avro build to use SANS lapack — galbramc / detail
  563. Forgot to remove test hack — galbramc / detail
  564. Fixed mistake in FindLAPACK — galbramc / detail
  565. Add more diagnostics to Jacobian failure with RefCoordSolver — galbramc / detail
  566. More debug info for singular RefCoordSolve — galbramc / detail
  567. Missing include — galbramc / detail
  568. GRRRRRRRRRRRRRRRR CELL GROUP 1 NEEDS  TO BE ADDED TO RESOLVE CELL GROUPS FOR CG GRRRRRRRRRR (╯°□°)╯︵ ┻━┻ — pcaplan / detail
  569. got rid of hackery — pcaplan / detail
  570. extra space — pcaplan / detail
  571. Working towards scale invariant DenseLinAlg solves — galbramc / detail
  572. line unit test should really allow edge split since its the same as an iso split, vera fixes too — pcaplan / detail
  573. cleanup of unused debugging stuff...what a colossal waste of time — pcaplan / detail
  574. trailing whitespace — pcaplan / detail
  575. Update vera to remove scripts when warn/error is changed. Add limits inlcude where numeric_limits is used. — galbramc / detail
  576. reverting to new AGLS formulation — arthuang / detail
  577. reverting to not use Philip's split to get thru Jenkins — arthuang / detail
  578. silence warning — pcaplan / detail
  579. Updates to CMake files — savithru / detail
  580. Fix quadrature memory leak again — galbramc / detail
  581. trying to solve pivot problem... not yet though. — cfrontin / detail
  582. added assert grid. Wraps check grid in a try-catch and return true if it passes. Can use in places where checkGrid can be removed in Release mode — hcarson / detail
  583. pre merge — hcarson / detail
  584. Updates so avro+Wake appears to be working — galbramc / detail
  585. fixed ReferenceElement constraint jacobian assignment ya dingus. — cfrontin / detail
  586. fixed ReferenceElement constraint jacobian assignment ya dingus, pt. II: unit testing boogaloo — cfrontin / detail
  587. Removed pivoting change that was dumb anyway. — cfrontin / detail
  588. Combined into one file — ursachi / detail
  589. sandbox updates — arthuang / detail
  590. moving towards rans adaptive cg — arthuang / detail
  591. RANS test case working — arthuang / detail
  592. rans joukowski working for real? — arthuang / detail
  593. Fixed link errors — galbramc / detail
  594. More fixes for avro+Wake. Needs some more checks. — galbramc / detail
  595. Forgot files — galbramc / detail
  596. Fixed compile error — galbramc / detail
  597. Split up the Adaptation library by dimension — galbramc / detail
  598. Compile error fix — galbramc / detail
  599. Fix link errors — galbramc / detail
  600. Another link error — galbramc / detail
  601. Migrated single boundary layer scalarfunction from 4D to 3D+T — cfrontin / detail
  602. Remove debug files — galbramc / detail
  603. Don't run avro with wakes due to failing debug dumps in avro — galbramc / detail
  604. Split avro Wake edges that span the entire wake — galbramc / detail
  605. Trying to split segments on wakes, but I need help... — galbramc / detail
  606. Fail depends tests if files are generated — galbramc / detail
  607. Reworking MOESS to use Field_CG — galbramc / detail
  608. revert away from Philip's local split — arthuang / detail
  609. update error estimate unit test — arthuang / detail
  610. unused variable — arthuang / detail
  611. added gravity to 2D two phase case — ericdow / detail
  612. New parameters for new EPIC 10.3 executable — galbramc / detail
  613. More reworking of MOESS — galbramc / detail
  614. More cleaning of MOESS — galbramc / detail
  615. Fix ccache path for SANS_Depend tests — galbramc / detail
  616. Another script fix for depends — galbramc / detail
  617. catch invalid split for high-order — pcaplan / detail
  618. Lots more work towards refactored MOESS — galbramc / detail
  619. More work on MOESS — galbramc / detail
  620. updated ADST cases. — cfrontin / detail
  621. MOESS refactoring to use fields seems to be done. — galbramc / detail
  622. Fixed includes — galbramc / detail
  623. Fixed parallel print statement — galbramc / detail
  624. SANS optimizer was using wrong initial step matric. — galbramc / detail
  625. Fixed bug in edge length deviation — galbramc / detail
  626. Minor fixes — galbramc / detail
  627. More ping tests — galbramc / detail
  628. Split up ProjectGlobalField — galbramc / detail
  629. Asymmetric cost schedule — galbramc / detail
  630. CMake updates — galbramc / detail
  631. continued working on debugging two phase gravity fluxes — ericdow / detail
  632. TAO implied metric calculation works in parallel — galbramc / detail
  633. Fix typo — galbramc / detail
  634. Remove mesh_0.json from tests with avro — galbramc / detail
  635. More work towards parallel MOESS with TAO — galbramc / detail
  636. Some compile fixes — galbramc / detail
  637. Synchronize error models in ghost/zombie cells — galbramc / detail
  638. Parallel MOESS is very close — galbramc / detail
  639. Link error fixes — galbramc / detail
  640. Some small fixes — galbramc / detail
  641. working out RANS stabilization terms — arthuang / detail
  642. pre merge — hcarson / detail
  643. Stole MMA from NLopt to parallelize with TAO. — galbramc / detail
  644. Added paralel serial equivalence test for MOESS TAO-MMA — galbramc / detail
  645. If I TAO+MMA does not wory, try MMA+MPI — galbramc / detail
  646. oliver test is running, not getting right rates yet — arthuang / detail
  647. Added artificial viscosity to tilted reservoir test case — savithru / detail
  648. version used in the git bisect — hcarson / detail
  649. refactored stabilized CG — arthuang / detail
  650. more robust quadrature tests, shouldn't have issues with quadrature caching. — cfrontin / detail
  651. push to laptop in the middle of updating RANSSA — arthuang / detail
  652. missing term for adjoint in RANSSA.. needs unit testing — arthuang / detail
  653. rans sourcegradientjacobiangradient thoroughly unit tested — arthuang / detail
  654. Added pressure integral output for two-phase. Modified tilted reservoir test-case. — savithru / detail
  655. Parallel MMA algorithm! — galbramc / detail
  656. Forgot the unit test — galbramc / detail
  657. and the actual files — galbramc / detail
  658. more forgotten files — galbramc / detail
  659. Some vera fixes — galbramc / detail
  660. took out demote surreal — arthuang / detail
  661. unit tests updated for stabilized integrand — arthuang / detail
  662. changes to error model to use order scaling in the regularization — hcarson / detail
  663. A number of fixes for parallel MOESS — galbramc / detail
  664. copyright notice fix — hcarson / detail
  665. fixing a function that got mangled somehow/sometime — hcarson / detail
  666. license error — hcarson / detail
  667. Updated ErrorModel_Element unit test — galbramc / detail
  668. Fixed warning and relaxed tolerance — galbramc / detail
  669. More minor fixes — galbramc / detail
  670. Added another derivative of St option — galbramc / detail
  671. Really really relaxed tolerance for Parallel/Serial equivalence for TAO with Intel... not sure whats up with that... — galbramc / detail
  672. updates to strongform integrand — arthuang / detail
  673. added needed hooks to 3D for stabilized CG — arthuang / detail
  674. Updated unit tests and whatno — blsc / detail
  675. Nightly fixes — galbramc / detail
  676. Trying to improve the speed of XField_Lagrange — galbramc / detail
  677. add RANS ndconvert omterface — arthuang / detail
  678. fixed up RANS asymptotic — arthuang / detail
  679. added trace on scalar, bug in new source fcn in 3d — arthuang / detail
  680. fixed unit test, mod source — arthuang / detail
  681. new adjoint analytic function for 1D BL — arthuang / detail
  682. added needed hooks for AV, implementation will be needed — arthuang / detail
  683. getting unit tests to pass — arthuang / detail
  684. working on RANS... — arthuang / detail
  685. relax tol on unit test — arthuang / detail
  686. truly linear adjoint — arthuang / detail
  687. caught some bugs, put in unit tests — arthuang / detail
  688. pre merge — hcarson / detail
  689. Quadrature fix on AD3DST. — cfrontin / detail
  690. AD4DST refactor. — cfrontin / detail
  691. orthodoxy is unconsciousness. — cfrontin / detail
  692. quadrature fixes — cfrontin / detail
  693. New unit tests and other updates — blsc / detail
  694. Moving stuff to hypersonic — blsc / detail
  695. More to hypersonic — blsc / detail
  696. AD4D update. — cfrontin / detail
  697. Fixed some analyzer warnings — galbramc / detail
  698. One more analyzer suppression — galbramc / detail
  699. Some MPI cleanup — galbramc / detail
  700. target dof factor — pcaplan / detail
  701. always forget to switch local split — pcaplan / detail
  702. horizontal tab — pcaplan / detail
  703. wake tests were originally off — pcaplan / detail
  704. Finalized moving nDOFpossessed to Field — galbramc / detail
  705. Added missing include — galbramc / detail
  706. settings for Marshall to run — hcarson / detail
  707. Fixed a bug in PTC residual indexing — shunz / detail
  708. Add debug information for MassMatrix singular matrix errors — galbramc / detail
  709. fixes to mesh adapt — hcarson / detail
  710. Missing include — galbramc / detail
  711. Enabled daisy chain in algebraic equation set class for PTC.  Refactored (and hopefully clarified) calculation of pseudo-transient contributions to residuals and jacobians — shunz / detail
  712. Fixed a bug in PTC AES's cell group integration calls, and a bug in residualPseudoTemporal daisy-chain call — shunz / detail
  713. Enabled PTC for coupled IBL of 4x4 block system — shunz / detail
  714. Updated unit test — shunz / detail
  715. CG RANS is looking more promising... — arthuang / detail
  716. loops in rans joukowski — arthuang / detail
  717. One more missing include — galbramc / detail
  718. fixes for jenkins — hcarson / detail
  719. fixed excessively small initial case... now starting from predicted uniform box size. — cfrontin / detail
  720. Added solve4d smart dof case. — cfrontin / detail
  721. added hooks for BICGStab — arthuang / detail
  722. Speed improvements for UniqueElem and XField_Lagrange — galbramc / detail
  723. Purged matrix manipulation Nishida hack — galbramc / detail
  724. fixed test to match ErrorModel_Elemental.h — hcarson / detail
  725. One move too many — galbramc / detail
  726. playing around with stabilization — arthuang / detail
  727. RANS with scaling — arthuang / detail
  728. Fix for jenkins parallel make — galbramc / detail
  729. Updates to porous media PDEs: added gravity to 2D two-phase, added pressure output functional — savithru / detail
  730. Vera fixes — savithru / detail
  731. Fixed copyright notice — savithru / detail
  732. One more fix.. — savithru / detail
  733. Fix uninitialized value — savithru / detail
  734. Some cleanup in PTC — shunz / detail
  735. Fixed a bug in PTC daisy chain implementation: previously, past solution and time step field was not properly updated for daisy-chained equations — shunz / detail
  736. reapply quadorder fix. — cfrontin / detail
  737. Fix for singular matrix detection. Only guard against 1/0. — galbramc / detail
  738. Separating out LAPACK from LAPACKE — galbramc / detail
  739. Fixes for LAPACK interface — galbramc / detail
  740. Forgot to switch back a change — galbramc / detail
  741. Only test with LAPACKE on reynolds — galbramc / detail
  742. Don't show LAPACKE as an option on OSX — galbramc / detail
  743. Minor fix — galbramc / detail
  744. Include MKL in coverge testing — galbramc / detail
  745. Source intel for coverage — galbramc / detail
  746. Fixes for checking LAPACK — galbramc / detail
  747. Automatic checking of all lapack functions used by SANS — galbramc / detail
  748. Some small fixes — galbramc / detail
  749. Relax tolerance a bit more for intel — galbramc / detail
  750. Added maximum rate matrix output — galbramc / detail
  751. updated i/o on 4d cases. — cfrontin / detail
  752. New files for Adjoint consistent potential — galbramc / detail
  753. Cleanup trace matrix print — galbramc / detail
  754. Forgot a file — galbramc / detail
  755. working on RANS — arthuang / detail
  756. Fixes for latest refine — galbramc / detail
  757. agls formulation looks better? — arthuang / detail
  758. modified RANS tests — arthuang / detail
  759. pre merge — hcarson / detail
  760. typo denomerator to denominator — hcarson / detail
  761. caught an indexing bug with interior trace groups — hcarson / detail
  762. some tweaks as was retesting using elemental estimates. They still don't work (phew....) — hcarson / detail
  763. changed the Galerkin DoubleBL case to match up with the DG one — hcarson / detail
  764. changed checkGrid() to assert(assertGrid()). This is the same as checkGrid() in debug mode, but gets removed in release — hcarson / detail
  765. bug fixes and clean up — hcarson / detail
  766. undoing the assertGrid, it doesn't work how I thought it did — hcarson / detail
  767. updated io on 2D+T cases. — cfrontin / detail
  768. fixed solve4d i/o — cfrontin / detail
  769. fixes to make the avro grids work in the adapt — hcarson / detail
  770. fixed h approximation, *philip's tableflip emoticon*. — cfrontin / detail
  771. oops. — cfrontin / detail
  772. hooks for modifying order and power and command line — hcarson / detail
  773. fixed dumbass error. — cfrontin / detail
  774. Minor fixes per intel guide. Fix avro+wake. — galbramc / detail
  775. still working on RANS... — arthuang / detail
  776. Some fixes for BLAS and turn off one Wake test — galbramc / detail
  777. adding new parmafield builders — arthuang / detail
  778. Forgot file dump — galbramc / detail
  779. Updated EPIC interface — galbramc / detail
  780. distance function gradient working — arthuang / detail
  781. hack for sourcegradient compiles — arthuang / detail
  782. unitialized warnings from jenkins — hcarson / detail
  783. tweak for hypersonic — hcarson / detail
  784. found a bug in RANS source gradients — arthuang / detail
  785. this one not that one — arthuang / detail
  786. deprecated ElementDual local patch. Everyone can use Element now, and it should throw an exception if you run with ElementDual — hcarson / detail
  787. added the spaceType to the dummy problems — hcarson / detail
  788. sigh. forgot they need override — hcarson / detail
  789. maaaaaan — hcarson / detail
  790. sigh — hcarson / detail
  791. Fix for PETSc 3.11 — galbramc / detail
  792. moved the all_reduce inside the #define of Boundary Outputs. The FunctionalCell_Galerkin already includes an all_reduce — hcarson / detail
  793. Setup for Mike Park to test metric calculations — galbramc / detail
  794. commiting the new error model and the two double boundary layer cases to run on hypersonic — hcarson / detail
  795. Fix nightly clang warning — galbramc / detail
  796. typos and a small test for the DOF Map, didn't catch anything... — hcarson / detail
  797. playing with formulations, added source to BC — arthuang / detail
  798. getting closer — arthuang / detail
  799. SA wake test case — arthuang / detail
  800. minor edits to rans, unit tests — arthuang / detail
  801. i think the stabilization is sound... — arthuang / detail
  802. Added case to adaptND_mesh_optimizer_toy to easily generate unstructured uniform grids. — cfrontin / detail
  803. SolveND_DGBR2_AD_ST_toy for 3D and 4D now have grid loading capability, but it's ifdeffed out for now. — cfrontin / detail
  804. fixed #define — cfrontin / detail
  805. start from DG grids — arthuang / detail
  806. more tinkering with RANS — arthuang / detail
  807. Some updates for a few things I' — blsc / detail
  808. nitsche param now includes source term — arthuang / detail
  809. Added 2D+T CG unstabilized advection diffusion mechanics. — cfrontin / detail
  810. added an integrand for estimating the square of the L2 error locally — hcarson / detail
  811. locked the TopoDim template to the Topology::TopoDim template. We should not be templating on both here, these should be removed — hcarson / detail
  812. added some integral tests — hcarson / detail
  813. A class for computing L2 error estimates, either nodally or elementally — hcarson / detail
  814. Reduced ErrorOrder_4D_DG_Pentatope_btest max grid size to reduce runtime — galbramc / detail
  815. Fixed uninitialized data with intel — galbramc / detail
  816. removed TopoDim from the for_each_XXX functions. Also added Topology::CellTopoDim, which gives the dimension of the topology for which Topology was a trace. — hcarson / detail
  817. Also made a GalerkinLib in the process of splitting out the local solve machinery for CG to use in the L2 proction solver — hcarson / detail
  818. fixing up unit tests to match new indicator calculation. Also changing mitState Nitsche to use the p independent lengthL. Will then need to choose constants properly some other way. — hcarson / detail
  819. A Nodal error estimate order test — hcarson / detail
  820. refactor into explicit instantiations and added GalerkinLib to a CMakeLists.txt I forgot — hcarson / detail
  821. more instantiations and fix a bug — hcarson / detail
  822. moving towards a CG L2 local projection. — hcarson / detail
  823. updating error estimate order tests. DG now uses the mitState BC, the CG one does not as it can't achieve the rates. There must be an instability in the adjoint.... — hcarson / detail
  824. Use CG local patch bcs for the local solve — hcarson / detail
  825. actually added the declaration to the header... — hcarson / detail
  826. Added a re-roll of the c++-14 make_unique feature — hcarson / detail
  827. Added a re-roll of the c++-14 make_unique feature — hcarson / detail
  828. first use of make_unique. — hcarson / detail
  829. ErrorEstimateL2 should now handle p0 or p1 estimation gracefully, and also actually handled that stupid merge conflict — hcarson / detail
  830. Fixed many clang analyzer complaints — galbramc / detail
  831. new MDG directory — arthuang / detail
  832. MDG integrand cell unit test passing — arthuang / detail
  833. changed name of test and added the notebook that generated the L2 error integrand tests — hcarson / detail
  834. forgot an mpi include — hcarson / detail
  835. all_reduce only works on POD not the KahanSum — hcarson / detail
  836. some tweaks — hcarson / detail
  837. interior trace w/ 1d unit test — arthuang / detail
  838. missed a bracket in the merge — arthuang / detail
  839. jacobian ping test added for cell,trace — arthuang / detail
  840. forgot to turn CG LG trace back on — hcarson / detail
  841. added CG sandbox for AD 2D+T problem. — cfrontin / detail
  842. Fixed more analyzer warningw — galbramc / detail
  843. fixed for push, incorporated hugh's mistakenly included preprocessor define. — cfrontin / detail
  844. more hugh fixes plus trueoutput fixes. — cfrontin / detail
  845. SolverInterfaceL2 project actually uses the correct local patch for CG now — hcarson / detail
  846. JEEEEENNNNKIONNNNSSSSS — cfrontin / detail
  847. added SA nitsche — arthuang / detail
  848. jacobian and residual unit tests passing — arthuang / detail
  849. Fixed typo — galbramc / detail
  850. jenkins punched me in the face *again*. — cfrontin / detail
  851. MDG solve works.. needs debugging — arthuang / detail
  852. grumble — cfrontin / detail
  853. VOLUME_WEIGHTED crept through on those last commits. It shouldn't have and this fixes that — hcarson / detail
  854. why oh why did i not save the fixes last time — cfrontin / detail
  855. preprocessor sandbox troubles. — cfrontin / detail
  856. dumb preprocessor stuff fix. — cfrontin / detail
  857. bad include habits fixed. — cfrontin / detail
  858. MDG solves! optimal rates! — arthuang / detail
  859. warning fix. — cfrontin / detail
  860. moved some includes into the cpps — hcarson / detail
  861. removed PrimalNeighbors and added in Vertex — hcarson / detail
  862. Created Vertex Local grid. Have the four cpp, but only Area is actually declared, others would have link errors. Also a super basic unsplit test — hcarson / detail
  863. getting closer to everything compiling — arthuang / detail
  864. moved jacobian calculations into output integrands for Galerkin. bunch of stuff still not working — arthuang / detail
  865. getting closer to passing unit tests.. — arthuang / detail
  866. unit tests updated — arthuang / detail
  867. unit test/compile fixes — arthuang / detail
  868. indentation warning — arthuang / detail
  869. last final last warning bother. — cfrontin / detail
  870. tidying solve3d_CG_AD_ST_toy — cfrontin / detail
  871. Added vertexMode to Local patch, and edgeMap constructor to LocalBase — hcarson / detail
  872. removed the vertex local specialist patch. It might eventually be faster, but the development time would be much much slower — hcarson / detail
  873. MDG jacobianfunctional in place, solves are compiling — arthuang / detail
  874. 3D+T pde stuff should be good to go. — cfrontin / detail
  875. made the central vertex always dof 0. Also added flag for whether patch comes from splitting an edge attached to the vertex — hcarson / detail
  876. MDG compiles fine but doesn't stabilize in advective limit. Hmm... — arthuang / detail
  877. forgot to include a PrimalNeighbors rename — hcarson / detail
  878. MDG working well again.. we have to figure out the Nitsche BCs — arthuang / detail
  879. Some of the updates from hypersonic before merging — blsc / detail
  880. change cb back to 2 to pass Jenkins — arthuang / detail
  881. 2D error order compiling — arthuang / detail
  882. add function hooks to 3DST — arthuang / detail
  883. added function hooks for 1d, 2d spacetime — arthuang / detail
  884. fieldweighted cell integrand for MDG — arthuang / detail
  885. Fix some issues that came up during debug build — blsc / detail
  886. added fieldweighted for MDG trace integrand — arthuang / detail
  887. More clang analyzer warning fixes. — galbramc / detail
  888. more needed function hooks — arthuang / detail
  889. change to isothermal wall BCs, push to hypersonic — arthuang / detail
  890. ughhhhhh more ndconvert troubles — arthuang / detail
  891. add isothermal to RANs BCs — arthuang / detail
  892. working towards the nodal model. Moving to laptop — hcarson / detail
  893. working towards local indicator — hcarson / detail
  894. added the Simplex meta class — hcarson / detail
  895. moving to lab box — hcarson / detail
  896. removed unused typedef — arthuang / detail
  897. Nightly fixes — galbramc / detail
  898. fixed mdg unit tests — arthuang / detail
  899. Propogating changed from develop — blsc / detail
  900. Nightly fixes — galbramc / detail
  901. reordered MDG jac, added error estimate cell — arthuang / detail
  902. merge conflict — hcarson / detail
  903. RANS cases working pretty well, pushing to hypersonic — arthuang / detail
  904. mdg error estimates in place — arthuang / detail
  905. took out adjointState functions (mostly) — arthuang / detail
  906. completed sourceJacobianHACK change. MDG adjoints not quite working... — arthuang / detail
  907. Think I've got all the updates from hypersonic — blsc / detail
  908. 4d cg fields starting up... — cfrontin / detail
  909. error estimate unit test passing, but sandbox case is off... — arthuang / detail
  910. mdg error estimates working! — arthuang / detail
  911. typo — arthuang / detail
  912. cleanup — arthuang / detail
  913. moved into the SANS namespace — hcarson / detail
  914. removed Topology template, used Simplex<TopoDim> instead — hcarson / detail
  915. fixed hack interface — arthuang / detail
  916. added sub-cell step matrix accessor with 1D and 2D unit tests — hcarson / detail
  917. added unit testing for 3D RANS fncs, other cleanup — arthuang / detail
  918. forgot a file — arthuang / detail
  919. sandbox edits — arthuang / detail
  920. complaining about includes? — arthuang / detail
  921. unused variables.. push to tucano for memcheck — arthuang / detail
  922. unit test name change — arthuang / detail
  923. missing definition — arthuang / detail
  924. trying to fix segfault — arthuang / detail
  925. fixed the warning, but there's a segfault somewhere in edgelocal3d... — arthuang / detail
  926. wow that was really dumb but took 4 hours to find — arthuang / detail
  927. putting Nitsche into stabilization object.. stil lin process — arthuang / detail
  928. premerge — arthuang / detail
  929. most things compiling... — arthuang / detail
  930. added affine invariant implied metric calculation — hcarson / detail
  931. nitsche parameter change complete.. things seem to compile ok — arthuang / detail
  932. member variables out of order — arthuang / detail
  933. Added unit tests for gravity term in PDETwoPhase2D + some cleanup — savithru / detail
  934. tweaks to get MDG working for systems — arthuang / detail
  935. fixed checks for parallel — arthuang / detail
  936. whoops switched back — arthuang / detail
  937. hopefully more correct for parallel? — arthuang / detail
  938. Nightly fixes — galbramc / detail
  939. Another nightly fix — galbramc / detail
  940. More nightly fixes — galbramc / detail
  941. Another nightly fix — galbramc / detail
  942. big refactor of the edge solve. Removed the cell group business, and now builds nodal models from the data of the edge solves. No testing quite yet, but it compiles! — hcarson / detail
  943. on the way to 4d-ification of CG... — cfrontin / detail
  944. Hopefully last warning fix — galbramc / detail
  945. more of the same... — cfrontin / detail
  946. minor edits that shouldn't affect anything — arthuang / detail
  947. Merge conflict resolution and formatting issues — blsc / detail
  948. added a cell->node map to the nodalview. Also fixed a bug with edge local not correctly identifying that a node can be common to both vertices without sharing a cell with the edge. Basically a real niche case — hcarson / detail
  949. added hashing function for GroupElemIndex. Uses boost::hash. Can now use unordered_set and unordered_map on GroupElemIndex. Should be faster in those cases where we don't need orderedness, only unique — hcarson / detail
  950. tiny tweaks. uses linspace — hcarson / detail
  951. tweaks to the affInv implied metric option. Also forgot to add the #if for reference step calc — hcarson / detail
  952. added some commented code for inspecting eigenvalues for a 2x2 system. Useful for debugging — hcarson / detail
  953. MDG with discontinuous efld.. does better! — arthuang / detail
  954. working towards error estimate from fine scale — arthuang / detail
  955. minor change to AGLS — arthuang / detail
  956. missed a function update — arthuang / detail
  957. push to hypersonic — arthuang / detail
  958. push to hypersonic — arthuang / detail
  959. few changes to MDG output — arthuang / detail
  960. mdg rans sandbox compiling — arthuang / detail
  961. extra args for output — arthuang / detail
  962. print resid bug fix — arthuang / detail
  963. MDG qp should initialize to zero — arthuang / detail
  964. Commented out some stuff (with developer exceptions), will have to go back to that code — blsc / detail
  965. Updated tolerances — blsc / detail
  966. Removed unused variables — blsc / detail
  967. towards p= 1+ 3D+T AD... — cfrontin / detail
  968. moving to hypersonic — hcarson / detail
  969. Formatting fixes — blsc / detail
  970. fixing some bugs and moving to hypersonic — hcarson / detail
  971. another flag to turn off the metric dumping — hcarson / detail
  972. More vera warnings — blsc / detail
  973. Fixed unit test bug — blsc / detail
  974. changed FrobNormSq formula for MatrixSymS to exploit the symmetry — hcarson / detail
  975. added an inner product for VectorS. Can also handle a range of weighted inner products, with MatrixS, MatrixSymS and a diagonal — hcarson / detail
  976. added some instantiations, also started using the InnerProduct function directly — hcarson / detail
  977. added some 3D+T CG stuff ... work in progress... added 1D+T AD for learning syntax, added a lot of comments. — cfrontin / detail
  978. changed to 1 pt quadrature implied metric calculation. — hcarson / detail
  979. added mean, min, max quality calculator and output in the NLOPT output — hcarson / detail
  980. linked the use of the modified model to the use of the SANS optimizer. No longer compile time flag — hcarson / detail
  981. removed VOLUME_WEIGHTED and added FULL_NODAL. This compile time flag needs to be set to run in the nodal view of the world. Long term this will be the way to go, but it only works in serial presently, so leaving it disabled by default — hcarson / detail
  982. forgot to fix the mpi bit — hcarson / detail
  983. apparently boost::mpi needs its own special minimum and maximum functions... — hcarson / detail
  984. shortened the file by removing unneeded commenting and dead space — hcarson / detail
  985. missing 4d instantiation and an attempt at removing the compiler error. At least I compiled gnu5 and couldn't recreate it... — hcarson / detail
  986. maybe this works? — hcarson / detail
  987. forgot that we can't actually dump 4d grids... — hcarson / detail
  988. changed the exception to a warning — hcarson / detail
  989. forgot to rename them edge tests — hcarson / detail
  990. sigh — hcarson / detail
  991. manually return group and elem to make intel happy. Also reduced the number of shuffles to 3 in the implied test — hcarson / detail
  992. changed the tolerances a little, should now be able to do more shuffles — hcarson / detail
  993. changed the initial condition for the optimization to Log Euclidean. Had a case where affine invariant failed the non-linear solve, so lets just skip that — hcarson / detail
  994. Increasing coverage — blsc / detail
  995. only doing 1 shuffle in 3D because the bloody coverage takes too long — hcarson / detail
  996. I swear... — hcarson / detail
  997. using the max in the implied calculation. The optimization is so much easier/faster — hcarson / detail
  998. added a 3d corner singularity and also made the 3D L2 adapt flag based — hcarson / detail
  999. tweaks to try speed this damn thing up and get it through jenkins — hcarson / detail
  1000. correct beta val — hcarson / detail
  1001. added more iterations to the AffInv calc, and use the FrobNorm from DLA — hcarson / detail
  1002. save the last mesh, explicitly 2D folder, and Affine Invariant metric calculation — hcarson / detail
  1003. added the objective of maximizing average quality, this is also not a good one, but unsure what to do... — hcarson / detail
  1004. changed the range for the loops, so that the lower dof counts can be run serial — hcarson / detail
  1005. More coverage — blsc / detail
  1006. Nightly fixes — blsc / detail
  1007. changed AffInv to throw exception and revert to Log Euclidean. Also raised the tolerance slightly, as the tolerance is done the norm. Thus sqrt(eps) = 1e-8, so setting tol to 1e-7 — hcarson / detail
  1008. fixed betas. reset dump Metric to every iteration. changed 3D to dump the final qfld with the same filename — hcarson / detail
  1009. use the max det met — hcarson / detail
  1010. added outerproduct for VectorS — hcarson / detail
  1011. Hopefully faster 3D eigen solves — galbramc / detail
  1012. Forgot unit tests — galbramc / detail
  1013. Added an enum class for adding quality to the implied metric objective, can do maximize or minimize inverse. Also InverseLengthTensor for calculating the metric. Also fixed up the AffineInvariant calculation to use the correct Gradient descent algorithm from Pennec, thus it actually works now. — hcarson / detail
  1014. tweaks for cases — hcarson / detail
  1015. much reduced the tolerance for the affine invariant calculation. The non-linear optimization is really not that bad, and it is the most theoretically justifiable metric, so we should use it — hcarson / detail
  1016. a forgotten rename — hcarson / detail
  1017. Fix for new 3D eigen value calculation — galbramc / detail
  1018. Relaxed a tolerance — galbramc / detail
  1019. Fix intel leak. Better logic checking for refine. — galbramc / detail
  1020. Updates to track CAD parameters with avro — galbramc / detail
  1021. Some fixes for avro. Show implied metric cost. — galbramc / detail
  1022. Fixes for avro with full potential — galbramc / detail
  1023. Fix typo and warning — galbramc / detail
  1024. Fixes for CAD parameters with avro in parallel — galbramc / detail

#236 (May 25, 2019, 1:52:10 AM)

  1. matmul instantiation — pcaplan / detail
  2. reduced number of orientations to make elementspacetime_pentatope test go faster — pcaplan / detail
  3. Remove maybe uninitialized wanrings on gnu 8 — galbramc / detail
  4. last instantiation i promise — pcaplan / detail
  5. bug in cost model log-euclidean test because of the vertex/step matrix ordering — pcaplan / detail
  6. seriously this has to be the last one — pcaplan / detail
  7. last one! — pcaplan / detail
  8. trigger commit — pcaplan / detail
  9. up to p=2 for element space time test because it's really slow — pcaplan / detail
  10. Revamped Qauxv/parameters API. — shunz / detail
  11. Fixed typos — shunz / detail
  12. Propagated more changes in IBL parameter API.  Verified coupled IBL UniFIeld forced laminar case. — shunz / detail
  13. Fixed more tests related to IBL parameter API — shunz / detail
  14. Update test/system/AnalyticSolve/AnalyticSolve2D_DGAdvective_IBL_StagnationFlow_SingleElem_LamiBL_btest.cpp — shunz / detail
  15. Verified two system tests with PDEIBL2D using LF flux. — shunz / detail
  16. Fixed uncoupled IBL HDG case — shunz / detail
  17. 2D+T is running, working towards validation. — cfrontin / detail
  18. Added json parser to PyDict — galbramc / detail
  19. Fixed formatting from vera++. Also reformulated 2D+T case for convergence investigation. — cfrontin / detail
  20. switched from pure adv to AD for hypersonic. — cfrontin / detail
  21. 2D+T AD ST toy fix; need unit tests for BCAD2D.h — cfrontin / detail
  22. Fixed bugs in PDEIBLUniField — shunz / detail
  23. Lots of refactoring of AFLR4 and sansLIPAIM. All seems to be functioning. — galbramc / detail
  24. Minor fix — galbramc / detail
  25. Tweak to how AFLR is found — galbramc / detail
  26. Fixed compile error — galbramc / detail
  27. Update minimum boost version to 1.50 due to bug in property_tree json reader. — galbramc / detail
  28. Merged AFLR4 test into EGTessModel — galbramc / detail
  29. Fixed flux feedthrough for 2D+T AD. — cfrontin / detail
  30. More extensive try with sansLIPAIM — galbramc / detail
  31. Most sansLIP updates — galbramc / detail
  32. Fix MKL_PARDISO for transpose solves. Bug fix for AFLR3 — galbramc / detail
  33. Use static MKL libraries due to python issues — galbramc / detail
  34. Don't statically link in the ld library — galbramc / detail
  35. Increased timout time for HDG test — galbramc / detail
  36. Realzed timing on another test — galbramc / detail
  37. Refactored UniField IBL and ran it for forced and free transition problems — shunz / detail
  38. Played captured transition (forced and free) — shunz / detail
  39. Updated initial solution guesses for reformulated captured transition IBL — shunz / detail
  40. Unified system test on the case of uncoupled IBL laminar BL on airfoil — shunz / detail
  41. Refactored IBL numerical fluxes — shunz / detail
  42. Updated pyrite files for coupled coupled IBL cases with laminarBL+turbulentWake — shunz / detail
  43. Moved 2D+T convergence to Solve3D, made Adapt3D version adapt. — cfrontin / detail
  44. Typo fix. — cfrontin / detail
  45. Ran and added pyrite files for captured forced transition without using cut-cell machinery — shunz / detail
  46. push to hypersonic — pcaplan / detail
  47. Verified reasonable agreement between natural transition solution of UniField IBL using cut-cell against that using plain DG without cut-cell — shunz / detail
  48. Added recent-5 to Adapt3D 2D+T AD — cfrontin / detail
  49. Added MKL instantiation — shunz / detail
  50. Separate list of MKL static libraries — galbramc / detail
  51. Always link in MKL statically with sansLIPAIM — galbramc / detail
  52. Moved error message for sansLIP — galbramc / detail
  53. Building mpi all_reduce into FunctionalCell_Galerkin — galbramc / detail
  54. Added missing includes — galbramc / detail
  55. projection stabilization — arthuang / detail
  56. Minor edits — shunz / detail
  57. Changed default numerical flux — shunz / detail
  58. Added pyrite files for fitted transition of forced cases — shunz / detail
  59. Removed redundant cases — shunz / detail
  60. Minor updates — shunz / detail
  61. Added an alternative turbulent onset ctau value — shunz / detail
  62. Updates before running grid convergence on fitted transition — shunz / detail
  63. fixed a bug in PDEIBL source.  other minor fixes — shunz / detail
  64. Updated pyrtied files to fix the bug in PDEIBL lag source term introduced on 2018/11/02 in commit 9625612 — shunz / detail
  65. Tweaked a default setting for system test pyrite checks — shunz / detail
  66. Cleaned up system tests — shunz / detail
  67. Fixed free-forced nested solver logic for transition at element interface — shunz / detail
  68. Updated and cleaned up pyrite files — shunz / detail
  69. Updated an initial solution file for flow transition system tests — shunz / detail
  70. Renaming — shunz / detail
  71. minor updates — shunz / detail
  72. Added a to-do — shunz / detail
  73. added to-do — shunz / detail
  74. Refactored two system tests.  Added options to change transition model parameters on the fly — shunz / detail
  75. Fixed a bug/feature in an unimportant if statement — shunz / detail
  76. Cleanup — shunz / detail
  77. Cleaned up deprecated parts.  Fixed LF flux.  Refactored transition front source/flux.  Editted printout — shunz / detail
  78. Fixed uninitialized data in Flux_mitState_Nitsche for pure advective. — galbramc / detail
  79. Updated pyrite file after updating PDEIBL LFflux related stuff — shunz / detail
  80. Removed variable length arrays — galbramc / detail
  81. Replaced turbulent BL TS wave growth rate with the previous formulation of interpolating over turbulent sub-element, which makes cd vs ntcrit relation smooth.  Updated pyrite files for free transition — shunz / detail
  82. Minor refactoring — shunz / detail
  83. Fixed LFflux for IBLUniField.  Refactored test case and updated pyrite file — shunz / detail
  84. Missed a few variable length arrays — galbramc / detail
  85. One more warning — galbramc / detail
  86. Refactored PDEIBLUniField member field to allow for parameter ntcrit sweep.  Updated initial solution guess to be based on an existing IBL solution. — shunz / detail
  87. Fixed warnings — galbramc / detail
  88. Better cleanup of coverage information — galbramc / detail
  89. Don't build sandbox with nightly — galbramc / detail
  90. Clang analyzer should still build sandbox — galbramc / detail
  91. Revived gradation penalty. Needs lots of tweaks and studying — galbramc / detail
  92. Added unit test for 2D+T implementations. — cfrontin / detail
  93. Working on pentatope tests. — cfrontin / detail
  94. Changed scaling factor for objective — ursachi / detail
  95. Added 1D and 2D includes — ursachi / detail
  96. Updates for latest version of AFLR — galbramc / detail
  97. Gradation still needs more work... — galbramc / detail
  98. Fix compiler error — galbramc / detail
  99. Fixed arry bound typo in test — galbramc / detail
  100. more tests for orientations of tets in 4d — pcaplan / detail
  101. lingering changes — pcaplan / detail
  102. DG fields in 4d + unit tests — pcaplan / detail
  103. silly typo — pcaplan / detail
  104. can only use KF triangulation if avro is hooked in — pcaplan / detail
  105. Working on unit grids... — cfrontin / detail
  106. transferring — arthuang / detail
  107. Another formatting fix. — cfrontin / detail
  108. Another formatting fix. — cfrontin / detail
  109. minor editting — shunz / detail
  110. added modified diffusion matrix — arthuang / detail
  111. minor mod to proj stabilization — arthuang / detail
  112. Fix includes. — cfrontin / detail
  113. pre merge — hcarson / detail
  114. add proj stab matrices for 1DAD, stokes — arthuang / detail
  115. taking out some comments — arthuang / detail
  116. Taking the warning machete to things. — cfrontin / detail
  117. Refactored test case input — shunz / detail
  118. Udpates to sansLIPAIM to work with new CAPS dataTransfer setup — galbramc / detail
  119. system test for DG with pentatopes — pcaplan / detail
  120. Minor update — shunz / detail
  121. Added an option of wake ctau_eq but not used — shunz / detail
  122. moving to hyper branch — hcarson / detail
  123. MCMC flat plate for class — hcarson / detail
  124. forcing function for heating — hcarson / detail
  125. use SANS convention for trace orientation instead of the one used in avro — pcaplan / detail
  126. 1Ptope test working, fixed assumptions on nodal definitions. — cfrontin / detail
  127. fixed GLS? — arthuang / detail
  128. edit cmake list — arthuang / detail
  129. 2Tope unitgrid working, testcase working. — cfrontin / detail
  130. Turned off tesseract for push. — cfrontin / detail
  131. Light LIP tecplot files — galbramc / detail
  132. Smaller tecplot file for LIP — galbramc / detail
  133. Fix scoping issues. — cfrontin / detail
  134. Fixed warnings — galbramc / detail
  135. Added comment with origin of SVD3 algorithm — galbramc / detail
  136. handmade unit grid: 1 pentatope with 5 pentatope neighbours — pcaplan / detail
  137. allow all orientations of traces (1 to 12) in checkGrid — pcaplan / detail
  138. local grid extraction for pentatopes — pcaplan / detail
  139. cell to trace connectivity for pentatopes — pcaplan / detail
  140. finish implementation of element associativity of pentatopes — pcaplan / detail
  141. unit tests for local grid extraction around pentatopes (single pentatope and single pentatope surrounded by neighbours) — pcaplan / detail
  142. other minor changes — pcaplan / detail
  143. gradprojection working — arthuang / detail
  144. verified optimal order for 1DAD grad projection — arthuang / detail
  145. comm rank = 0 using xfield_lagrange — pcaplan / detail
  146. 24Ptope working, passing checkGrids(). test in progress. — cfrontin / detail
  147. remove duplicate unit grids in favour of handmade ones — pcaplan / detail
  148. warning fix — pcaplan / detail
  149. warning fix — pcaplan / detail
  150. 24Ptope unit grid working, tested and working. — cfrontin / detail
  151. commit so it ought to run for ben? — hcarson / detail
  152. Add duration to each build in Jenkins email. — galbramc / detail
  153. tweaks and the forcing — hcarson / detail
  154. full rank diffusive stabilizaiton — arthuang / detail
  155. actually making it not work — hcarson / detail
  156. changed the try catch for implied metric optimization to doing nothing rather than excepting. Also tweaks to MCMC file — hcarson / detail
  157. tweaks and removed a bunch of heap memory allocations — hcarson / detail
  158. added options to the quadratic — hcarson / detail
  159. more mods to projection stabilization — arthuang / detail
  160. undoing a lot of sketchy things — arthuang / detail
  161. rolling back more sketchy stuff — arthuang / detail
  162. mods for running with avro — hcarson / detail
  163. comment typos — hcarson / detail
  164. switching over to avro — hcarson / detail
  165. everything compiles, gotta track down unit tests — arthuang / detail
  166. getting unit tests to pass — arthuang / detail
  167. Reworked build of parmetis. refine uses parmetis. added avro build. — galbramc / detail
  168. minor edits to edge local unit tests — arthuang / detail
  169. Fixes for avro and refine — galbramc / detail
  170. Suppress warning — galbramc / detail
  171. Parallel Field4D test fixes. Give refine more time. — galbramc / detail
  172. Relaxed tolerance for intel — galbramc / detail
  173. Don't run ErrorOrder_4D in parallel — galbramc / detail
  174. Updated refine build — galbramc / detail
  175. Updated refine check — galbramc / detail
  176. Nightly build fixes... plus a stopgap ifdef until the SVDless 4D normal vector is done. — cfrontin / detail
  177. Reduce run time of 4D error order check — galbramc / detail
  178. Relaxed another tolerance — galbramc / detail
  179. trying out some edge stabilization — arthuang / detail
  180. MCMC things and got the temp sensors working — hcarson / detail
  181. Remove files written by avro — galbramc / detail
  182. Dissable refine testing for now — galbramc / detail
  183. Added memcheck to parmetis build — galbramc / detail
  184. Ignore external parmetis — galbramc / detail
  185. added hessian to interior trace — arthuang / detail
  186. edge stabilization working-ish? — arthuang / detail
  187. changing branch — hcarson / detail
  188. MC for running on hypersonic — hcarson / detail
  189. ready for running on hypersonic — hcarson / detail
  190. Generalized valgrind suppression — galbramc / detail
  191. moving to hypersonic again — hcarson / detail
  192. egads coords must have 3 dimensions even in 2d — pcaplan / detail
  193. the final files from the project — hcarson / detail
  194. forgot a function — hcarson / detail
  195. pushing to tucano — arthuang / detail
  196. Suppressed CMakeLists errors. [TBD] — shunz / detail
  197. Fixed panel metod tests — shunz / detail
  198. AFLR4 updates and some Jenkins scripts — galbramc / detail
  199. Link tetgen before avro — galbramc / detail
  200. instantation of elementlocal version of local splits for 4d...unit test will fail because the result is different than savi's convention — pcaplan / detail
  201. missing definitions for elementlocal & edgelocal — pcaplan / detail
  202. some instantiations of savi's method for doing local splits — pcaplan / detail
  203. xfield_lagrange method of doing local splits...still debugging...will fix later... — pcaplan / detail
  204. Refactoring.  Patched unit tests — shunz / detail
  205. More unit tests — shunz / detail
  206. added unit tests — shunz / detail
  207. Fixed unit tests — shunz / detail
  208. Fixed IBL unit tests — shunz / detail
  209. Added unit test.  Turned off unused methods. — shunz / detail
  210. Fixed a bug in CMakeLists: use of out-of-scope variable — shunz / detail
  211. Fixed a bug in cmake files that only appear when building with Xcode — shunz / detail
  212. Refactored ping test input array type.  Fixed IBL-related 4x4 block system ping tests.  Added missing MPI-related method definitions for pure virtural methods — shunz / detail
  213. Relocated code into SANS_MPI macros; otherwise, errors are raised about "member access to incomplete type" — shunz / detail
  214. Verified/fixed/cleaned IBL system tests with transition (full upwind). — shunz / detail
  215. Fixed duplicate naming of boost test suite — shunz / detail
  216. Relaxed pyrite tolerance — shunz / detail
  217. Updated forced-transition pyrite files after the bug fix in commit b30121ee5531d91e84aac94fbdab6462f458f4f8 — shunz / detail
  218. Turned off file dump — shunz / detail
  219. Fixed formatting — shunz / detail
  220. Fixed empty traling line — shunz / detail
  221. Fixed DG and HDG AES tests for uncoupled IBL — shunz / detail
  222. Fixed formatting — shunz / detail
  223. Reverted changes to (viscous) HDG stuff: those abandoned changes treated qfld and afld as a single bundle field — shunz / detail
  224. Update AlgebraicEquationSet_HDGAdvective_Advection_btest.cpp — shunz / detail
  225. Fixed one more test affected by ping test refactoring.  Fixed formatting and screen output — shunz / detail
  226. Fixed another system test affected by IBL Qauxv interpreter refactoring — shunz / detail
  227. Update ErrorOrder_1D_HDGAdvective_Advection_btest.cpp — shunz / detail
  228. Fixed warning and missing instantiation — shunz / detail
  229. Added an instantiation just for completeness, although it is no longer used — shunz / detail
  230. moving towards adjoint GLS — arthuang / detail
  231. Cleaned sandbox cases — shunz / detail
  232. relaxed tolerances for clang_release — shunz / detail
  233. Suppressed output — shunz / detail
  234. Fixed bugs in CMakeLists — shunz / detail
  235. Fixed HDG advection tests — shunz / detail
  236. Removed the pure advection test case using (viscous) HDG machinery — shunz / detail
  237. parallel outputs in galerkin solver interface, AGLS error estimation fixed? — arthuang / detail
  238. Refactored halving line search and fixed unit tests — shunz / detail
  239. Fixed memory errors — shunz / detail
  240. Relaxed tolerance for intel — shunz / detail
  241. relaxed tolerances for intel18 — shunz / detail
  242. Relaxed timeout limits — shunz / detail
  243. Speed up unit tests in response to Jenkins timeout — shunz / detail
  244. Fixed typo — shunz / detail
  245. Relaxed tolerance for gnu48 — shunz / detail
  246. Tried to fix timeout on Jenkins testing (coverage_clang reynolds) — shunz / detail
  247. Reverted CMakeLists to see if TIMEOUT is set properly this time on Jenkins — shunz / detail
  248. minor refactoring — shunz / detail
  249. Refactored CMakeLists for Xcode build — shunz / detail
  250. Refactored Newton solver — shunz / detail
  251. Minor fix — shunz / detail
  252. Fixed warnings — shunz / detail
  253. Added IBL max update fraction — shunz / detail
  254. Enabled under-relaxed Newton update for coupled 4x4 block system of IBL with free transition. — shunz / detail
  255. Refactor of avro XField interface — galbramc / detail
  256. Consistent logic for setting cmake testing timout property — galbramc / detail
  257. Fixed refine interface change — galbramc / detail
  258. Fix ifdef when not using avro — galbramc / detail
  259. More fixes to deal with avro — galbramc / detail
  260. Minor cleanup — galbramc / detail
  261. Added unit tests for IBL updateFraction — shunz / detail
  262. Upgrade PETSc — galbramc / detail
  263. More avro and PETSc tweaks — galbramc / detail
  264. I don't understand why dl library is needed to link a static library... — galbramc / detail
  265. Fix for refine check — galbramc / detail
  266. Suppress compiler warning when building PETSc — galbramc / detail
  267. Fix for avro with 4D — galbramc / detail
  268. Enable refine testing again — galbramc / detail
  269. Updated copyright date to 2019 — galbramc / detail
  270. Updated copyright date to 2019 — galbramc / detail
  271. dimension-independent local splits — pcaplan / detail
  272. timing tests show dim-independent implementation on par with savithru's impl...tried to debug hugh's local xfield in primal mode but something is wrong...unit tests on the way — pcaplan / detail
  273. adding stabilized error estimation infrastructure — arthuang / detail
  274. more playing with AGLS — arthuang / detail
  275. minor edits — arthuang / detail
  276. reconciling merge conflicts and some tweaks — hcarson / detail
  277. license updates — hcarson / detail
  278. fixes to match avro — hcarson / detail
  279. forgot to add the avro defined precompile check — hcarson / detail
  280. relaxed tolerances and forgot to split world — hcarson / detail
  281. tweaking tol again... — hcarson / detail
  282. another tweak... — hcarson / detail
  283. cleanup of localpatch + commenting — pcaplan / detail
  284. copyright — pcaplan / detail
  285. more copyright — pcaplan / detail
  286. Updates for MOESS optimizations. Still needs more work. — galbramc / detail
  287. Instantiations for 4D AD solve. — galbramc / detail
  288. A few fixes — galbramc / detail
  289. Compile fixes — galbramc / detail
  290. More instantiations for 4D — galbramc / detail
  291. removed anachronistic definition of primal grid. Primal grid now matches the behavior of the normal DG grids. Unit tests have just been turned off in the meantime — hcarson / detail
  292. make sure mpi is init'd before calling rank by actually running in parallel — pcaplan / detail
  293. revert back to dual — pcaplan / detail
  294. ifdef SANS_AVRO for tests with CKF triangulation — pcaplan / detail
  295. changed to Dual in the system test — hcarson / detail
  296. attempted to fix nightly tests — shunz / detail
  297. Relaxed timings, fixed warning — galbramc / detail
  298. Updated pyrite files to fix nightly tests — shunz / detail
  299. Moved timing test into sandbox — galbramc / detail
  300. Cleanup of refine interface with auto memory management. — galbramc / detail
  301. Modest progress on instantiations. — cfrontin / detail
  302. Fix include — galbramc / detail
  303. 4D box unit grid grandfathered out of XField_KuhnFreudenthal. — cfrontin / detail
  304. added fix to 3D — hcarson / detail
  305. removed the separate 4D file, just added an instantiate at the end of 3D — hcarson / detail
  306. p=7 led to error close to machine zero, which seemed to cause touble to nightly ErrorOrder test.  Cut back p from 7 to 6 — shunz / detail
  307. p=6 still too high for pyrite test for ErrorOrder — shunz / detail
  308. Attempted to warning "use of zero-allocated memory" — shunz / detail
  309. Some cleanup in the sandbox. Added 2D L2Project adaptation — galbramc / detail
  310. Added tecplot dump for metric fields. Other small fixes — galbramc / detail
  311. Changed floor to round for generating new 1D mesh — ursachi / detail
  312. Minor refactoring — shunz / detail
  313. Compile fixes and more dependency warning suppressions — galbramc / detail
  314. Add dl library for avro — galbramc / detail
  315. Replaced nt transport equation with G variable as in SciTech paper, although the results are equivalent — shunz / detail
  316. bits and pieces — hcarson / detail
  317. added linear args and a test — hcarson / detail
  318. just wanna get my stuff in the repo — pcaplan / detail
  319. Files for parallel periodic XField2D_Box_Triangle_Lagrange (Issues need to be fixed) — kug46 / detail
  320. retrieve edge indices and sub elems from split — pcaplan / detail
  321. ref coordinates on split sub cells — pcaplan / detail
  322. Added a layer of abstractions when evaluating fluxes, sources etc. in IBL pde class — shunz / detail
  323. Fixed formatting... previously went under the radar since vera++ was not installed locally... — shunz / detail
  324. inst of some 4d adaptation things — pcaplan / detail
  325. Added scalar and dot product fixes for MatrixSymS — galbramc / detail
  326. Working on 3d ST... — cfrontin / detail
  327. Enabled smooth laminar/turbulent blending — shunz / detail
  328. Fixed SVD calculation for normal vector for 4D tet. — cfrontin / detail
  329. Scrubbed some comments. — cfrontin / detail
  330. edits to gls error estimation — arthuang / detail
  331. unit tests for basis function ref elem split — pcaplan / detail
  332. 4d adapt? — pcaplan / detail
  333. Fixed intel errors by relaxing tolerance and reconciling a missing pyrite file specialized for intel MKL — shunz / detail
  334. added a Field weighted stabilized CG nodal estimate integrand test in 2D — hcarson / detail
  335. comment — hcarson / detail
  336. Continued work on ElementXField implementations. — cfrontin / detail
  337. Vera fixes, COPYRIGHT fixes, and some avro preprocessor fixes. — cfrontin / detail
  338. Updates for 2D L2 Projection sandbox test — galbramc / detail
  339. Updates for 1D L2 Projection sandbox test — galbramc / detail
  340. Clearing out high-level exceptions whose low-level implementations are done. — cfrontin / detail
  341. Added last bits of ADST4D case, should run (?) now. — cfrontin / detail
  342. Added new trace free step matrix error model. Not enabled. — galbramc / detail
  343. added a 2D error estimate test, and asserted assumption on basis function type — hcarson / detail
  344. Fix. — cfrontin / detail
  345. fixed the estimate vary tests — hcarson / detail
  346. notebook with Double BL exact solutions — hcarson / detail
  347. forgot the copyright change — hcarson / detail
  348. Normalize MOESS optimization with nlopt — galbramc / detail
  349. Fixed undefined reference — galbramc / detail
  350. Fixed a bug in laminar/turbulent blending function — shunz / detail
  351. ifdef SANS_AVRO requirements in unit tests. — cfrontin / detail
  352. removed the scp to devastator. Should be useful for everyone now — hcarson / detail
  353. forgot to change a quadratic function explicit constructor — hcarson / detail
  354. undoing a print — hcarson / detail
  355. EQUILATERAL PENTATOPE coordinates + added unit volume check in unit test to catch this — pcaplan / detail
  356. unit test for split ref step matrix on pentatopes + generating matlab script — pcaplan / detail
  357. unit tests for error model — pcaplan / detail
  358. 4D L2 ERROR ADAPTATION WORKS...cleaning up........ — pcaplan / detail
  359. Added new MOESS optimization without global FrobNorm — galbramc / detail
  360. Forgot CMake file — galbramc / detail
  361. CG artificial viscosity in 2D — blsc / detail
  362. Small fix for cmake summary — galbramc / detail
  363. Weekly test fixes — galbramc / detail
  364. Modified AlgEqSet, IntegrandInteriorTrace and 2D DGAdvective toy for Parallel 2D Periodic Grids — kug46 / detail
  365. Towards parallel PETSc/TAO — galbramc / detail
  366. Refactored intermittency calculation — shunz / detail
  367. Generailized Projection to Qauxi to handle blended intermittency. — shunz / detail
  368. Trying to bump coverage. — cfrontin / detail
  369. Some cleanup of logEuclidian cost — galbramc / detail
  370. Added lagrange P1 to the exception — hcarson / detail
  371. copywrite update for some files — arthuang / detail
  372. Various small fixes — galbramc / detail
  373. added a Tanh2 function based on Loseille's Tanh3 — hcarson / detail
  374. Updated Embedding unit test for quadrature integration — galbramc / detail
  375. Reverted to binary intermittency as default — shunz / detail
  376. Relaxed tolerance for intel compiler.  Restored default to binary intermittency for existing tests — shunz / detail
  377. Trying to get coverage... — cfrontin / detail
  378. Tests added + un-tested, unused additions removed. — cfrontin / detail
  379. Added comments and made sure ADST4D case is ready for parallelization. — cfrontin / detail
  380. More parallel fixes. — cfrontin / detail
  381. Relaxed torleranc for gnu48 — shunz / detail
  382. More parallel fixes. — cfrontin / detail
  383. Added regularized point source to accommodate potential co-existence of free and forced transition in the captured transition treatment — shunz / detail
  384. Updated ADST3D cases (solve and adapt) for avro and MPI use. — cfrontin / detail
  385. Forgot an MPI redefine. — cfrontin / detail
  386. jk MPI fix actually this time. — cfrontin / detail
  387. Minor fix — galbramc / detail
  388. Continued avro- and MPI-ification. — cfrontin / detail
  389. Unit testing fixes. — cfrontin / detail
  390. Fixed warning. — cfrontin / detail
  391. Fixed fstream initializer. — cfrontin / detail
  392. Warning cleanup... — cfrontin / detail
  393. Fixes towards parallel+periodic — galbramc / detail
  394. Coverage improvement... — cfrontin / detail
  395. cleanup of interface to match savithru's — pcaplan / detail
  396. instantiation of 4d savithru splits (technically the extraction works because that's what i started with but the actual split does not) — pcaplan / detail
  397. Fixes for running parallel DG with periodic BCs — galbramc / detail
  398. Removed adapt4d skeleton from build. — cfrontin / detail
  399. Added instantiation — galbramc / detail
  400. ffs — cfrontin / detail
  401. instantiate SVD (with error), XField_Local calls XField_LocalPatch in 4d which local_split_patch is turned off — pcaplan / detail
  402. ifdef sans avro in sandbox file — pcaplan / detail
  403. instantiation of new MOESS SANS optimizer for 4d — pcaplan / detail
  404. experimenting w p1 adjoint — arthuang / detail
  405. adapt3d change in api — pcaplan / detail
  406. relaxed tolerance for system test — pcaplan / detail
  407. publicize error model functions...still not sure why — pcaplan / detail
  408. added note about protected methods for error model class — pcaplan / detail
  409. missing operator for 1d function — pcaplan / detail
  410. unprotected from SANS_AVRO avro namespace use — pcaplan / detail
  411. rename file to avoid copyright check — pcaplan / detail
  412. deleted file — pcaplan / detail
  413. Only have vera look at .cpp and .h files — galbramc / detail
  414. SANS_CHECK_CLOSE not BOOST_CHECK_EQUAL for floats, come on philip — pcaplan / detail
  415. bug != in shock capturing — arthuang / detail
  416. revert back to formulation — arthuang / detail
  417. add expt stab (no-op) to 2DAD — arthuang / detail
  418. Added a C2 continuous smooth abs — hcarson / detail
  419. fix intel compiler warning — pcaplan / detail
  420. add pending changes in local patch header — pcaplan / detail
  421. Run SANS_Commit in parallel — galbramc / detail
  422. Cannot specify format for 'time' on all systems — galbramc / detail
  423. Updates to SANS_Commit.sh — galbramc / detail
  424. One more parallel fix — galbramc / detail
  425. Forgot to run 'make all' — galbramc / detail
  426. Fix make warning for now — galbramc / detail
  427. dev exceptioned code required only for 4d tecplot. — cfrontin / detail
  428. added a C2 smoothabs and matlab file that generated — hcarson / detail
  429. actually got the smoothmax1, smoothmax2 functions work, also added implicitly defined smoothmin1 and smoothmin2 — hcarson / detail
  430. merge fix — cfrontin / detail
  431. merge fix 2 — cfrontin / detail
  432. working on new error models — hcarson / detail
  433. ASExpCombo function for testing L2 — hcarson / detail
  434. Revive Adapt L2Project — galbramc / detail
  435. partial cleanup of local patch before supporting CG patches — pcaplan / detail
  436. Removed PBAM — galbramc / detail
  437. fix for jenkins, smoothmax2, tweaks to SANS opt and the VectorX hack to work with Phil — hcarson / detail
  438. unparallelized a test, there's a bug in P4 Hierarchical parallel — hcarson / detail
  439. turning the P3 and P4 unsplit tests off again. There's something weird and MPI-ish going wrong here — hcarson / detail
  440. Missed one include — galbramc / detail
  441. Missed one more file — galbramc / detail
  442. more cleanup of local patch — pcaplan / detail
  443. Suppress valgrind avro+intel strange warnings — galbramc / detail
  444. Broke up DGBR2lib trying to reduce compile time — galbramc / detail
  445. pre merge — hcarson / detail
  446. support for CG local solves with XField_LocalPatch — pcaplan / detail
  447. forgot to propagate changes in function names to tests — pcaplan / detail
  448. turnon off local patch splits for jenkins — pcaplan / detail
  449. silence warning — pcaplan / detail
  450. Switched implied metric optmizer to MMA — galbramc / detail
  451. agls tweaks — arthuang / detail
  452. Relaxed tolerance — galbramc / detail
  453. complete unit tests for xfield local patch...still need some work on CG tests — pcaplan / detail
  454. merge conflict — hcarson / detail
  455. a stupid bug — hcarson / detail
  456. changes to optimizers, and also turning the modified model back off — hcarson / detail
  457. Fix work weekly — galbramc / detail
  458. Weekly suppression and revived cotire — galbramc / detail
  459. Fixed the last error. — galbramc / detail
  460. Fixed a warning — galbramc / detail
  461. Added option to use CG field for PTC time step — galbramc / detail
  462. Changed the span of the SANS frob norm penalty function — galbramc / detail
  463. unit tests for DG/CG patches — pcaplan / detail
  464. remove print_inline — pcaplan / detail
  465. Conical method of stroud added, and working. Still needs integration into pentatope. — cfrontin / detail
  466. Added a ego map to EGTessModel that maps from All egos to Unique egos — galbramc / detail
  467. add xfield for full potential code using avro — pcaplan / detail
  468. Integrated Stroud into 4D quadrature. — cfrontin / detail
  469. cleanup avro wake3d — pcaplan / detail
  470. Fixed compile error — galbramc / detail
  471. Fixed another compile error — galbramc / detail
  472. work towards high-order support for local patch split — pcaplan / detail
  473. getting unit tests to pass... — arthuang / detail
  474. fixing merge conflicts — arthuang / detail
  475. Fix up PseudoTime_btest — galbramc / detail
  476. Fixed btest memory leak. — cfrontin / detail
  477. Improved stroud testing. — cfrontin / detail
  478. experimenting with an element based local solve — arthuang / detail
  479. BCNone is dead. Long live BCNone. — hcarson / detail
  480. New Implied Metric optimizer based on logM. Various other small fixes. — galbramc / detail
  481. elemID must be global — pcaplan / detail
  482. support for high-order local patch — pcaplan / detail
  483. ifdef avro — pcaplan / detail
  484. Updates for CG 3D Euler with shock capturing and 2D RANS — blsc / detail
  485. multiple def from copy paste — pcaplan / detail
  486. uninitializaed data fix (typo) — cfrontin / detail
  487. changes to error model interface for high-order local splits — pcaplan / detail
  488. Removing problematic instantiations due to wall distance parameter with artificial viscosity for RANS — blsc / detail
  489. add info as to which type of field is being sampled — pcaplan / detail
  490. Removing code from BCEuler3D_mitState.h which was ifdef'd out — blsc / detail
  491. added integer template for equation number — hcarson / detail
  492. typo in avro wake — pcaplan / detail
  493. specialized wake model not defined without avro — pcaplan / detail
  494. added an ND test of the BCNone with and without useFluxViscous — hcarson / detail
  495. Galerkin folder passes — hcarson / detail
  496. added the downcast to NoneBC to extract the boolean — hcarson / detail
  497. converted HDG over to the new Nones — hcarson / detail
  498. Updated implied metric for TAO. Fixed a number of floating point problems. — galbramc / detail
  499. More robust testing, compiler warning silencing. — cfrontin / detail
  500. dont inherit from xfield_avro if not defined — pcaplan / detail
  501. still missing some ifdef — pcaplan / detail
  502. Various compile fixes. Generalized Adapt2D_Mesh_Optimize for all mesh generators. — galbramc / detail
  503. Missed one — galbramc / detail
  504. Warning fixes — galbramc / detail
  505. killed a few more BCTypeNone references, just plugging away — hcarson / detail
  506. pre merge — hcarson / detail
  507. Removed the BCNoneUniField — hcarson / detail
  508. Added switching for expensive PI quadrature/low-cost NI quadrature. Fixed associated tests to get correct convergence rates. — cfrontin / detail
  509. committing sandbox pre-merge — arthuang / detail
  510. someone forgot to actually use the W and B typedefs — hcarson / detail
  511. missing include — hcarson / detail
  512. fixed the CMakeLists.txt — hcarson / detail
  513. made BCNone_AV to do with annoying ArtVisc feature — hcarson / detail
  514. missing includes and last bit — hcarson / detail
  515. fixed typo: derived to dervied — hcarson / detail
  516. vera slap correction — hcarson / detail
  517. Fixed one more BCNone — galbramc / detail
  518. forgot a file — hcarson / detail
  519. Removing more of the block artificial viscosity stuff in 2D and unit test updates — blsc / detail
  520. More merge conflicts — blsc / detail
  521. More merge conflict resolution — blsc / detail
  522. Fixed memory leak. — cfrontin / detail
  523. used quadrature cache for L2 projection — pcaplan / detail
  524. fix for order = 0 integration — pcaplan / detail
  525. New cost target for SANS MOESS optimizer. Lots of work towards avro+Wakes. — galbramc / detail
  526. Fixed typo — galbramc / detail
  527. Minor fixes — galbramc / detail
  528. One more typo — galbramc / detail
  529. Unit test updates — blsc / detail
  530. Helps to use consistent array size — galbramc / detail
  531. Updates to jenkins scripts — galbramc / detail
  532. Segregating MeshAdapter — galbramc / detail
  533. Missing instantiation — blsc / detail
  534. Fixed mistake in BuildAVRO — galbramc / detail
  535. Fixes for 3D CG case with artificial viscosity — blsc / detail
  536. Fixed compile issues related to separating dimensions — galbramc / detail
  537. Initializing variables to fix some compiler warnings — blsc / detail
  538. LU factorization on processors so PETSc solves reliably — blsc / detail
  539. Missed a few — galbramc / detail
  540. IRS updates — blsc / detail
  541. Fix for gnu 4.8 — galbramc / detail
  542. Refactored tecplot output to reduce link time — galbramc / detail
  543. Forgot files — galbramc / detail
  544. Fixed muliple instantiations — galbramc / detail
  545. pre merge — pcaplan / detail
  546. Syncing with hypersonic — blsc / detail
  547. reverting a dead end — arthuang / detail
  548. Adapt4D de-mothballing. — cfrontin / detail
  549. Fixed 'potential' memory leak problem by putting frees in same scope as creation. — cfrontin / detail
  550. Suppress cppcheck bug — galbramc / detail
  551. tweaked AGLS setup, hope this one gets through!! — arthuang / detail
  552. AGLS formulation w/ correction getting good rates! push to laptop, need to fix unit tests — arthuang / detail
  553. unit tests should be working... — arthuang / detail
  554. pre merge — hcarson / detail
  555. Another cppcheck suppression — galbramc / detail
  556. clean up on choosing reSolve groups — hcarson / detail
  557. some clean up — hcarson / detail
  558. added a virtual method for computing Initial Error. The default version has the overhead of a solve associated, whereas the SolverInterface version has the cheaper version that avoids the solve and thus is more robust — hcarson / detail
  559. parameter for avro to allow for interior boundaries needed for wake models — pcaplan / detail
  560. unit tests ready to go — arthuang / detail
  561. Adding 4D Legendre basis for Adapt4D + error estimates. — cfrontin / detail
  562. cmake addition of 4d legendre... still not finished though. — cfrontin / detail
  563. oops — cfrontin / detail
  564. don't use Philip's split for now — arthuang / detail
  565. add nb for output correction — arthuang / detail
  566. got rid of a unnecessary sandbox, updated other test — arthuang / detail
  567. One less call to checkGrid for curved LocalPatch — galbramc / detail
  568. More IRS stuff — blsc / detail
  569. moved metric conformity to separate file — pcaplan / detail
  570. tried to assess metric conformity and re-adjust target cost but simpler to just ask the mesher and have inner loop on adaptations to control target cost — pcaplan / detail
  571. pushing to hypersonic — arthuang / detail
  572. some fixes to actually use the volume factor... — pcaplan / detail
  573. new elemental error estimate for CG, not especially tested but seems to be ok — hcarson / detail
  574. more tweaks to cases — hcarson / detail
  575. Add static caching for pentatope quadrature. — cfrontin / detail
  576. Set edge length bound = 1 for 1D — ursachi / detail
  577. Added exponential and maxcubic functions — ursachi / detail
  578. 1D test cases — ursachi / detail
  579. std::stringstream has a surprisingly expensive constructor — galbramc / detail
  580. Fixed formatting — galbramc / detail
  581. Added missing copyright — galbramc / detail
  582. Added missing includes — galbramc / detail
  583. include set — pcaplan / detail
  584. merge — pcaplan / detail
  585. still default to savithru's local split — pcaplan / detail
  586. protect quadrature tests with use_conical — pcaplan / detail
  587. Deleted unnecessary includes — ursachi / detail
  588. changes to make avro grids compile again — hcarson / detail
  589. cleanup and forgotten files — hcarson / detail
  590. Progress towards avro+Wakes. Added intel19 to jenkins env. — galbramc / detail
  591. Quadrature fix. — cfrontin / detail
  592. Added Legendre4D Bases. — cfrontin / detail
  593. Adapt4D ADST should *start*. — cfrontin / detail
  594. Remove files dumped by avro — galbramc / detail
  595. Fixed missing parameter checks — galbramc / detail
  596. New CFL evolution logic (ifdef'd out) — blsc / detail
  597. Missed a file — blsc / detail
  598. Improved speed of XField_LocalPatch — galbramc / detail
  599. Allow longer time for slow test — galbramc / detail
  600. debug CG local patch — pcaplan / detail
  601. Update UniqueTrace to use UniqueElem — galbramc / detail
  602. forgot a multiply — blsc / detail
  603. Added 4D pentatope Legendre unit tests. — cfrontin / detail
  604. Complete Legendre 4D test. — cfrontin / detail
  605. Actually this time. — cfrontin / detail
  606. Universalized legendre max order, refactored variable. — cfrontin / detail
  607. first errormodel additions. — cfrontin / detail
  608. Updating the delta wing case — galbramc / detail
  609. Fixed compile errors — galbramc / detail
  610. reference element tested and ready to fly. — cfrontin / detail
  611. More compile fixes for DeltaWing. avro works again with it. — galbramc / detail
  612. Logic updates for PTC to hypersonic — blsc / detail
  613. Skip blank backtrace numberes. Lots of work towards avro+Wakes — galbramc / detail
  614. Fixed test for lagrange basis function spacetime, moving coords to inherited class from base class. — cfrontin / detail
  615. warning fix, you dumbass\! — cfrontin / detail
  616. Fixed up hashing and added unit tests for UniquElem — galbramc / detail
  617. fixed cross-machine tolerancing issue. — cfrontin / detail
  618. IRS updates — blsc / detail
  619. Lots of fixes for avro+Wakes — galbramc / detail
  620. Don't dump file — galbramc / detail
  621. pre merge — hcarson / detail
  622. Reduce testing in MOESS_Gradation_Optimizer_NLOPT_btest — galbramc / detail
  623. new and improved AGLS formulation — arthuang / detail
  624. premerge — pcaplan / detail
  625. Use operator() to modify avro topologyDup — galbramc / detail
  626. Updated linesearch with missing status variables — blsc / detail
  627. Add backtrace info to singular matrix. Enable VERA_ERROR for all builds with SANS_Commit.sh — galbramc / detail
  628. Quadrature fixes — galbramc / detail
  629. Removed unnecessary line — galbramc / detail
  630. Add vera to CentOS and Rhel. Undo some fixes. — galbramc / detail
  631. Added boost to LD_LIBRARY_PATH on CentOS — galbramc / detail
  632. Guard against negative nodal metrics from ImpliedMetic optimizer — galbramc / detail
  633. Updated avro and refine build to work with .tgz files — galbramc / detail
  634. Updated build of lapack and avro build to use SANS lapack — galbramc / detail
  635. Forgot to remove test hack — galbramc / detail
  636. Fixed mistake in FindLAPACK — galbramc / detail
  637. Add more diagnostics to Jacobian failure with RefCoordSolver — galbramc / detail
  638. More debug info for singular RefCoordSolve — galbramc / detail
  639. Missing include — galbramc / detail
  640. GRRRRRRRRRRRRRRRR CELL GROUP 1 NEEDS  TO BE ADDED TO RESOLVE CELL GROUPS FOR CG GRRRRRRRRRR (╯°□°)╯︵ ┻━┻ — pcaplan / detail
  641. got rid of hackery — pcaplan / detail
  642. extra space — pcaplan / detail
  643. Working towards scale invariant DenseLinAlg solves — galbramc / detail
  644. line unit test should really allow edge split since its the same as an iso split, vera fixes too — pcaplan / detail
  645. cleanup of unused debugging stuff...what a colossal waste of time — pcaplan / detail
  646. trailing whitespace — pcaplan / detail
  647. Update vera to remove scripts when warn/error is changed. Add limits inlcude where numeric_limits is used. — galbramc / detail
  648. reverting to new AGLS formulation — arthuang / detail
  649. reverting to not use Philip's split to get thru Jenkins — arthuang / detail
  650. silence warning — pcaplan / detail
  651. Updates to CMake files — savithru / detail
  652. Fix quadrature memory leak again — galbramc / detail
  653. trying to solve pivot problem... not yet though. — cfrontin / detail
  654. added assert grid. Wraps check grid in a try-catch and return true if it passes. Can use in places where checkGrid can be removed in Release mode — hcarson / detail
  655. pre merge — hcarson / detail
  656. Updates so avro+Wake appears to be working — galbramc / detail
  657. fixed ReferenceElement constraint jacobian assignment ya dingus. — cfrontin / detail
  658. fixed ReferenceElement constraint jacobian assignment ya dingus, pt. II: unit testing boogaloo — cfrontin / detail
  659. Removed pivoting change that was dumb anyway. — cfrontin / detail
  660. Combined into one file — ursachi / detail
  661. sandbox updates — arthuang / detail
  662. moving towards rans adaptive cg — arthuang / detail
  663. RANS test case working — arthuang / detail
  664. rans joukowski working for real? — arthuang / detail
  665. Fixed link errors — galbramc / detail
  666. More fixes for avro+Wake. Needs some more checks. — galbramc / detail
  667. Forgot files — galbramc / detail
  668. Fixed compile error — galbramc / detail
  669. Split up the Adaptation library by dimension — galbramc / detail
  670. Compile error fix — galbramc / detail
  671. Fix link errors — galbramc / detail
  672. Another link error — galbramc / detail
  673. Migrated single boundary layer scalarfunction from 4D to 3D+T — cfrontin / detail
  674. Remove debug files — galbramc / detail
  675. Don't run avro with wakes due to failing debug dumps in avro — galbramc / detail
  676. Split avro Wake edges that span the entire wake — galbramc / detail
  677. Trying to split segments on wakes, but I need help... — galbramc / detail
  678. Fail depends tests if files are generated — galbramc / detail
  679. Reworking MOESS to use Field_CG — galbramc / detail
  680. revert away from Philip's local split — arthuang / detail
  681. update error estimate unit test — arthuang / detail
  682. unused variable — arthuang / detail
  683. added gravity to 2D two phase case — ericdow / detail
  684. New parameters for new EPIC 10.3 executable — galbramc / detail
  685. More reworking of MOESS — galbramc / detail
  686. More cleaning of MOESS — galbramc / detail
  687. Fix ccache path for SANS_Depend tests — galbramc / detail
  688. Another script fix for depends — galbramc / detail
  689. catch invalid split for high-order — pcaplan / detail
  690. Lots more work towards refactored MOESS — galbramc / detail
  691. More work on MOESS — galbramc / detail
  692. updated ADST cases. — cfrontin / detail
  693. MOESS refactoring to use fields seems to be done. — galbramc / detail
  694. Fixed includes — galbramc / detail
  695. Fixed parallel print statement — galbramc / detail
  696. SANS optimizer was using wrong initial step matric. — galbramc / detail
  697. Fixed bug in edge length deviation — galbramc / detail
  698. Minor fixes — galbramc / detail
  699. More ping tests — galbramc / detail
  700. Split up ProjectGlobalField — galbramc / detail
  701. Asymmetric cost schedule — galbramc / detail
  702. CMake updates — galbramc / detail
  703. continued working on debugging two phase gravity fluxes — ericdow / detail
  704. TAO implied metric calculation works in parallel — galbramc / detail
  705. Fix typo — galbramc / detail
  706. Remove mesh_0.json from tests with avro — galbramc / detail
  707. More work towards parallel MOESS with TAO — galbramc / detail
  708. Some compile fixes — galbramc / detail
  709. Synchronize error models in ghost/zombie cells — galbramc / detail
  710. Parallel MOESS is very close — galbramc / detail
  711. Link error fixes — galbramc / detail
  712. Some small fixes — galbramc / detail
  713. working out RANS stabilization terms — arthuang / detail
  714. pre merge — hcarson / detail
  715. Stole MMA from NLopt to parallelize with TAO. — galbramc / detail
  716. Added paralel serial equivalence test for MOESS TAO-MMA — galbramc / detail
  717. If I TAO+MMA does not wory, try MMA+MPI — galbramc / detail
  718. oliver test is running, not getting right rates yet — arthuang / detail
  719. Added artificial viscosity to tilted reservoir test case — savithru / detail
  720. version used in the git bisect — hcarson / detail
  721. refactored stabilized CG — arthuang / detail
  722. more robust quadrature tests, shouldn't have issues with quadrature caching. — cfrontin / detail
  723. push to laptop in the middle of updating RANSSA — arthuang / detail
  724. missing term for adjoint in RANSSA.. needs unit testing — arthuang / detail
  725. rans sourcegradientjacobiangradient thoroughly unit tested — arthuang / detail
  726. Added pressure integral output for two-phase. Modified tilted reservoir test-case. — savithru / detail
  727. Parallel MMA algorithm! — galbramc / detail
  728. Forgot the unit test — galbramc / detail
  729. and the actual files — galbramc / detail
  730. more forgotten files — galbramc / detail
  731. Some vera fixes — galbramc / detail
  732. took out demote surreal — arthuang / detail
  733. unit tests updated for stabilized integrand — arthuang / detail
  734. changes to error model to use order scaling in the regularization — hcarson / detail
  735. A number of fixes for parallel MOESS — galbramc / detail
  736. copyright notice fix — hcarson / detail
  737. fixing a function that got mangled somehow/sometime — hcarson / detail
  738. license error — hcarson / detail
  739. Updated ErrorModel_Element unit test — galbramc / detail
  740. Fixed warning and relaxed tolerance — galbramc / detail
  741. More minor fixes — galbramc / detail
  742. Added another derivative of St option — galbramc / detail
  743. Really really relaxed tolerance for Parallel/Serial equivalence for TAO with Intel... not sure whats up with that... — galbramc / detail
  744. updates to strongform integrand — arthuang / detail
  745. added needed hooks to 3D for stabilized CG — arthuang / detail
  746. Updated unit tests and whatno — blsc / detail
  747. Nightly fixes — galbramc / detail
  748. Trying to improve the speed of XField_Lagrange — galbramc / detail
  749. add RANS ndconvert omterface — arthuang / detail
  750. fixed up RANS asymptotic — arthuang / detail
  751. added trace on scalar, bug in new source fcn in 3d — arthuang / detail
  752. fixed unit test, mod source — arthuang / detail
  753. new adjoint analytic function for 1D BL — arthuang / detail
  754. added needed hooks for AV, implementation will be needed — arthuang / detail
  755. getting unit tests to pass — arthuang / detail
  756. working on RANS... — arthuang / detail
  757. relax tol on unit test — arthuang / detail
  758. truly linear adjoint — arthuang / detail
  759. caught some bugs, put in unit tests — arthuang / detail
  760. pre merge — hcarson / detail
  761. Quadrature fix on AD3DST. — cfrontin / detail
  762. AD4DST refactor. — cfrontin / detail
  763. orthodoxy is unconsciousness. — cfrontin / detail
  764. quadrature fixes — cfrontin / detail
  765. New unit tests and other updates — blsc / detail
  766. Moving stuff to hypersonic — blsc / detail
  767. More to hypersonic — blsc / detail
  768. AD4D update. — cfrontin / detail
  769. Fixed some analyzer warnings — galbramc / detail
  770. One more analyzer suppression — galbramc / detail
  771. Some MPI cleanup — galbramc / detail
  772. target dof factor — pcaplan / detail
  773. always forget to switch local split — pcaplan / detail
  774. horizontal tab — pcaplan / detail
  775. wake tests were originally off — pcaplan / detail
  776. Finalized moving nDOFpossessed to Field — galbramc / detail
  777. Added missing include — galbramc / detail
  778. settings for Marshall to run — hcarson / detail
  779. Fixed a bug in PTC residual indexing — shunz / detail
  780. Add debug information for MassMatrix singular matrix errors — galbramc / detail
  781. fixes to mesh adapt — hcarson / detail
  782. Missing include — galbramc / detail
  783. Enabled daisy chain in algebraic equation set class for PTC.  Refactored (and hopefully clarified) calculation of pseudo-transient contributions to residuals and jacobians — shunz / detail
  784. Fixed a bug in PTC AES's cell group integration calls, and a bug in residualPseudoTemporal daisy-chain call — shunz / detail
  785. Enabled PTC for coupled IBL of 4x4 block system — shunz / detail
  786. Updated unit test — shunz / detail
  787. CG RANS is looking more promising... — arthuang / detail
  788. loops in rans joukowski — arthuang / detail
  789. One more missing include — galbramc / detail
  790. fixes for jenkins — hcarson / detail
  791. fixed excessively small initial case... now starting from predicted uniform box size. — cfrontin / detail
  792. Added solve4d smart dof case. — cfrontin / detail
  793. added hooks for BICGStab — arthuang / detail
  794. Speed improvements for UniqueElem and XField_Lagrange — galbramc / detail
  795. Purged matrix manipulation Nishida hack — galbramc / detail
  796. fixed test to match ErrorModel_Elemental.h — hcarson / detail
  797. One move too many — galbramc / detail
  798. playing around with stabilization — arthuang / detail
  799. RANS with scaling — arthuang / detail
  800. Fix for jenkins parallel make — galbramc / detail
  801. Updates to porous media PDEs: added gravity to 2D two-phase, added pressure output functional — savithru / detail
  802. Vera fixes — savithru / detail
  803. Fixed copyright notice — savithru / detail
  804. One more fix.. — savithru / detail
  805. Fix uninitialized value — savithru / detail
  806. Some cleanup in PTC — shunz / detail
  807. Fixed a bug in PTC daisy chain implementation: previously, past solution and time step field was not properly updated for daisy-chained equations — shunz / detail
  808. reapply quadorder fix. — cfrontin / detail
  809. Fix for singular matrix detection. Only guard against 1/0. — galbramc / detail
  810. Separating out LAPACK from LAPACKE — galbramc / detail
  811. Fixes for LAPACK interface — galbramc / detail
  812. Forgot to switch back a change — galbramc / detail
  813. Only test with LAPACKE on reynolds — galbramc / detail
  814. Don't show LAPACKE as an option on OSX — galbramc / detail
  815. Minor fix — galbramc / detail
  816. Include MKL in coverge testing — galbramc / detail
  817. Source intel for coverage — galbramc / detail
  818. Fixes for checking LAPACK — galbramc / detail
  819. Automatic checking of all lapack functions used by SANS — galbramc / detail
  820. Some small fixes — galbramc / detail
  821. Relax tolerance a bit more for intel — galbramc / detail
  822. Added maximum rate matrix output — galbramc / detail
  823. updated i/o on 4d cases. — cfrontin / detail
  824. New files for Adjoint consistent potential — galbramc / detail
  825. Cleanup trace matrix print — galbramc / detail
  826. Forgot a file — galbramc / detail
  827. working on RANS — arthuang / detail
  828. Fixes for latest refine — galbramc / detail
  829. agls formulation looks better? — arthuang / detail
  830. modified RANS tests — arthuang / detail
  831. pre merge — hcarson / detail
  832. typo denomerator to denominator — hcarson / detail
  833. caught an indexing bug with interior trace groups — hcarson / detail
  834. some tweaks as was retesting using elemental estimates. They still don't work (phew....) — hcarson / detail
  835. changed the Galerkin DoubleBL case to match up with the DG one — hcarson / detail
  836. changed checkGrid() to assert(assertGrid()). This is the same as checkGrid() in debug mode, but gets removed in release — hcarson / detail
  837. bug fixes and clean up — hcarson / detail
  838. undoing the assertGrid, it doesn't work how I thought it did — hcarson / detail
  839. updated io on 2D+T cases. — cfrontin / detail
  840. fixed solve4d i/o — cfrontin / detail
  841. fixes to make the avro grids work in the adapt — hcarson / detail
  842. fixed h approximation, *philip's tableflip emoticon*. — cfrontin / detail
  843. oops. — cfrontin / detail
  844. hooks for modifying order and power and command line — hcarson / detail
  845. fixed dumbass error. — cfrontin / detail
  846. Minor fixes per intel guide. Fix avro+wake. — galbramc / detail
  847. still working on RANS... — arthuang / detail
  848. Some fixes for BLAS and turn off one Wake test — galbramc / detail
  849. adding new parmafield builders — arthuang / detail
  850. Forgot file dump — galbramc / detail
  851. Updated EPIC interface — galbramc / detail
  852. distance function gradient working — arthuang / detail
  853. hack for sourcegradient compiles — arthuang / detail
  854. unitialized warnings from jenkins — hcarson / detail
  855. tweak for hypersonic — hcarson / detail
  856. found a bug in RANS source gradients — arthuang / detail
  857. this one not that one — arthuang / detail
  858. deprecated ElementDual local patch. Everyone can use Element now, and it should throw an exception if you run with ElementDual — hcarson / detail
  859. added the spaceType to the dummy problems — hcarson / detail
  860. sigh. forgot they need override — hcarson / detail
  861. maaaaaan — hcarson / detail
  862. sigh — hcarson / detail
  863. Fix for PETSc 3.11 — galbramc / detail
  864. moved the all_reduce inside the #define of Boundary Outputs. The FunctionalCell_Galerkin already includes an all_reduce — hcarson / detail
  865. Setup for Mike Park to test metric calculations — galbramc / detail
  866. commiting the new error model and the two double boundary layer cases to run on hypersonic — hcarson / detail
  867. Fix nightly clang warning — galbramc / detail
  868. typos and a small test for the DOF Map, didn't catch anything... — hcarson / detail
  869. playing with formulations, added source to BC — arthuang / detail
  870. getting closer — arthuang / detail
  871. SA wake test case — arthuang / detail
  872. minor edits to rans, unit tests — arthuang / detail
  873. i think the stabilization is sound... — arthuang / detail
  874. Added case to adaptND_mesh_optimizer_toy to easily generate unstructured uniform grids. — cfrontin / detail
  875. SolveND_DGBR2_AD_ST_toy for 3D and 4D now have grid loading capability, but it's ifdeffed out for now. — cfrontin / detail
  876. fixed #define — cfrontin / detail
  877. start from DG grids — arthuang / detail
  878. more tinkering with RANS — arthuang / detail
  879. Some updates for a few things I' — blsc / detail
  880. nitsche param now includes source term — arthuang / detail
  881. Added 2D+T CG unstabilized advection diffusion mechanics. — cfrontin / detail
  882. added an integrand for estimating the square of the L2 error locally — hcarson / detail
  883. locked the TopoDim template to the Topology::TopoDim template. We should not be templating on both here, these should be removed — hcarson / detail
  884. added some integral tests — hcarson / detail
  885. A class for computing L2 error estimates, either nodally or elementally — hcarson / detail
  886. Reduced ErrorOrder_4D_DG_Pentatope_btest max grid size to reduce runtime — galbramc / detail
  887. Fixed uninitialized data with intel — galbramc / detail
  888. removed TopoDim from the for_each_XXX functions. Also added Topology::CellTopoDim, which gives the dimension of the topology for which Topology was a trace. — hcarson / detail
  889. Also made a GalerkinLib in the process of splitting out the local solve machinery for CG to use in the L2 proction solver — hcarson / detail
  890. fixing up unit tests to match new indicator calculation. Also changing mitState Nitsche to use the p independent lengthL. Will then need to choose constants properly some other way. — hcarson / detail
  891. A Nodal error estimate order test — hcarson / detail
  892. refactor into explicit instantiations and added GalerkinLib to a CMakeLists.txt I forgot — hcarson / detail
  893. more instantiations and fix a bug — hcarson / detail
  894. moving towards a CG L2 local projection. — hcarson / detail
  895. updating error estimate order tests. DG now uses the mitState BC, the CG one does not as it can't achieve the rates. There must be an instability in the adjoint.... — hcarson / detail
  896. Use CG local patch bcs for the local solve — hcarson / detail
  897. actually added the declaration to the header... — hcarson / detail
  898. Added a re-roll of the c++-14 make_unique feature — hcarson / detail
  899. Added a re-roll of the c++-14 make_unique feature — hcarson / detail
  900. first use of make_unique. — hcarson / detail
  901. ErrorEstimateL2 should now handle p0 or p1 estimation gracefully, and also actually handled that stupid merge conflict — hcarson / detail
  902. Fixed many clang analyzer complaints — galbramc / detail
  903. new MDG directory — arthuang / detail
  904. MDG integrand cell unit test passing — arthuang / detail
  905. changed name of test and added the notebook that generated the L2 error integrand tests — hcarson / detail
  906. forgot an mpi include — hcarson / detail
  907. all_reduce only works on POD not the KahanSum — hcarson / detail
  908. some tweaks — hcarson / detail
  909. interior trace w/ 1d unit test — arthuang / detail
  910. missed a bracket in the merge — arthuang / detail
  911. jacobian ping test added for cell,trace — arthuang / detail
  912. forgot to turn CG LG trace back on — hcarson / detail
  913. added CG sandbox for AD 2D+T problem. — cfrontin / detail
  914. Fixed more analyzer warningw — galbramc / detail
  915. fixed for push, incorporated hugh's mistakenly included preprocessor define. — cfrontin / detail
  916. more hugh fixes plus trueoutput fixes. — cfrontin / detail
  917. SolverInterfaceL2 project actually uses the correct local patch for CG now — hcarson / detail
  918. JEEEEENNNNKIONNNNSSSSS — cfrontin / detail
  919. added SA nitsche — arthuang / detail
  920. jacobian and residual unit tests passing — arthuang / detail
  921. Fixed typo — galbramc / detail
  922. jenkins punched me in the face *again*. — cfrontin / detail
  923. MDG solve works.. needs debugging — arthuang / detail
  924. grumble — cfrontin / detail
  925. VOLUME_WEIGHTED crept through on those last commits. It shouldn't have and this fixes that — hcarson / detail
  926. why oh why did i not save the fixes last time — cfrontin / detail
  927. preprocessor sandbox troubles. — cfrontin / detail
  928. dumb preprocessor stuff fix. — cfrontin / detail
  929. bad include habits fixed. — cfrontin / detail
  930. MDG solves! optimal rates! — arthuang / detail
  931. warning fix. — cfrontin / detail
  932. getting closer to everything compiling — arthuang / detail
  933. moved jacobian calculations into output integrands for Galerkin. bunch of stuff still not working — arthuang / detail
  934. getting closer to passing unit tests.. — arthuang / detail
  935. unit tests updated — arthuang / detail
  936. unit test/compile fixes — arthuang / detail
  937. indentation warning — arthuang / detail
  938. last final last warning bother. — cfrontin / detail
  939. tidying solve3d_CG_AD_ST_toy — cfrontin / detail
  940. MDG jacobianfunctional in place, solves are compiling — arthuang / detail
  941. 3D+T pde stuff should be good to go. — cfrontin / detail
  942. MDG compiles fine but doesn't stabilize in advective limit. Hmm... — arthuang / detail
  943. MDG working well again.. we have to figure out the Nitsche BCs — arthuang / detail
  944. Some of the updates from hypersonic before merging — blsc / detail
  945. change cb back to 2 to pass Jenkins — arthuang / detail
  946. 2D error order compiling — arthuang / detail
  947. add function hooks to 3DST — arthuang / detail
  948. added function hooks for 1d, 2d spacetime — arthuang / detail
  949. fieldweighted cell integrand for MDG — arthuang / detail
  950. Fix some issues that came up during debug build — blsc / detail
  951. added fieldweighted for MDG trace integrand — arthuang / detail
  952. More clang analyzer warning fixes. — galbramc / detail
  953. more needed function hooks — arthuang / detail
  954. change to isothermal wall BCs, push to hypersonic — arthuang / detail
  955. ughhhhhh more ndconvert troubles — arthuang / detail
  956. add isothermal to RANs BCs — arthuang / detail
  957. removed unused typedef — arthuang / detail
  958. Nightly fixes — galbramc / detail
  959. fixed mdg unit tests — arthuang / detail
  960. Propogating changed from develop — blsc / detail
  961. Nightly fixes — galbramc / detail
  962. reordered MDG jac, added error estimate cell — arthuang / detail
  963. RANS cases working pretty well, pushing to hypersonic — arthuang / detail
  964. mdg error estimates in place — arthuang / detail
  965. took out adjointState functions (mostly) — arthuang / detail
  966. completed sourceJacobianHACK change. MDG adjoints not quite working... — arthuang / detail
  967. Think I've got all the updates from hypersonic — blsc / detail
  968. 4d cg fields starting up... — cfrontin / detail
  969. error estimate unit test passing, but sandbox case is off... — arthuang / detail
  970. mdg error estimates working! — arthuang / detail
  971. typo — arthuang / detail
  972. cleanup — arthuang / detail
  973. fixed hack interface — arthuang / detail
  974. added unit testing for 3D RANS fncs, other cleanup — arthuang / detail
  975. forgot a file — arthuang / detail
  976. sandbox edits — arthuang / detail
  977. complaining about includes? — arthuang / detail
  978. unused variables.. push to tucano for memcheck — arthuang / detail
  979. unit test name change — arthuang / detail
  980. missing definition — arthuang / detail
  981. trying to fix segfault — arthuang / detail
  982. fixed the warning, but there's a segfault somewhere in edgelocal3d... — arthuang / detail
  983. wow that was really dumb but took 4 hours to find — arthuang / detail
  984. putting Nitsche into stabilization object.. stil lin process — arthuang / detail
  985. premerge — arthuang / detail
  986. most things compiling... — arthuang / detail
  987. nitsche parameter change complete.. things seem to compile ok — arthuang / detail
  988. member variables out of order — arthuang / detail
  989. Added unit tests for gravity term in PDETwoPhase2D + some cleanup — savithru / detail
  990. tweaks to get MDG working for systems — arthuang / detail
  991. fixed checks for parallel — arthuang / detail
  992. whoops switched back — arthuang / detail
  993. hopefully more correct for parallel? — arthuang / detail
  994. Nightly fixes — galbramc / detail
  995. Another nightly fix — galbramc / detail
  996. More nightly fixes — galbramc / detail
  997. Another nightly fix — galbramc / detail
  998. on the way to 4d-ification of CG... — cfrontin / detail
  999. Hopefully last warning fix — galbramc / detail
  1000. more of the same... — cfrontin / detail
  1001. minor edits that shouldn't affect anything — arthuang / detail
  1002. Merge conflict resolution and formatting issues — blsc / detail
  1003. MDG with discontinuous efld.. does better! — arthuang / detail
  1004. working towards error estimate from fine scale — arthuang / detail
  1005. minor change to AGLS — arthuang / detail
  1006. missed a function update — arthuang / detail
  1007. push to hypersonic — arthuang / detail
  1008. push to hypersonic — arthuang / detail
  1009. few changes to MDG output — arthuang / detail
  1010. mdg rans sandbox compiling — arthuang / detail
  1011. extra args for output — arthuang / detail
  1012. print resid bug fix — arthuang / detail
  1013. MDG qp should initialize to zero — arthuang / detail
  1014. Commented out some stuff (with developer exceptions), will have to go back to that code — blsc / detail
  1015. Updated tolerances — blsc / detail
  1016. Removed unused variables — blsc / detail
  1017. towards p= 1+ 3D+T AD... — cfrontin / detail
  1018. Formatting fixes — blsc / detail
  1019. More vera warnings — blsc / detail
  1020. Fixed unit test bug — blsc / detail
  1021. added some 3D+T CG stuff ... work in progress... added 1D+T AD for learning syntax, added a lot of comments. — cfrontin / detail
  1022. Increasing coverage — blsc / detail
  1023. More coverage — blsc / detail
  1024. Nightly fixes — blsc / detail

#235 (May 18, 2019, 1:52:09 AM)

  1. CG field construction for TopoD4 meshes, tested on p=1 — pcaplan / detail
  2. target metric matching in 4d sandbox — pcaplan / detail
  3. Refactored projection to Qauxi_IBL by unifying implementations for DuplicateField and UniField IBL — shunz / detail
  4. element ridge unit test + equilateral pentatope jacobian — pcaplan / detail
  5. fixed bug with equilateral pentatope jacobian + matlab script + unit test on implied metric — pcaplan / detail
  6. added a boundary output for the triple BL, various clean ups, reverting to 0.25 for the default param — hcarson / detail
  7. Refactored UniField IBL variable interpreter.  More work needed to propagate to everywhere oc the code base. — shunz / detail
  8. Minor refactoring.  Updated pyrite file. — shunz / detail
  9. Refactoring.  Realizing that using ctau is fragile since log(ctau) is frequently needed to compute n_tilde but ctau can undershoot through below zero. — shunz / detail
  10. Refactored UniField variable/eqns to use nt as a conservative quantity — shunz / detail
  11. Restored panel method unit test — shunz / detail
  12. Tweaked iteration limit to wait until convergence — shunz / detail
  13. Refactored constructors of IBL PDE and fluid models.  Started PDEIBLUniField unit test.  Other minor refactoring — shunz / detail
  14. Added 2D+T AD case, in progress, with assorted necessary changes. Still needs BC fix. Also added framework for 4D single pentatope unit grid. Should hopefully also include all necessary unit testing, as mapped from similar 1D cases to cases of interest. — cfrontin / detail
  15. Fix typo — galbramc / detail
  16. field element pentatope tests — pcaplan / detail
  17. debugging costmodel_logeuclidean on topoD4 ping tests — pcaplan / detail
  18. brace alignment — pcaplan / detail
  19. uncomment xfieldspacetime_pentatope tests until actually implemented — pcaplan / detail
  20. unused defs — pcaplan / detail
  21. undefined references without avro — pcaplan / detail
  22. sign compare — pcaplan / detail
  23. missing file to compile — pcaplan / detail
  24. lingering comma — pcaplan / detail
  25. ridge -> frame — pcaplan / detail
  26. undef references — pcaplan / detail
  27. commit deleted files — pcaplan / detail
  28. wrap ifdef SANS_AVRO further ahead — pcaplan / detail
  29. omit spacetime pentatope btest from memcheck because it takes a long time, bump up timeout for it as well — pcaplan / detail
  30. instantiate matrixsyms4 projection for tets — pcaplan / detail
  31. basis function instantiate — pcaplan / detail
  32. matmul instantiation — pcaplan / detail
  33. reduced number of orientations to make elementspacetime_pentatope test go faster — pcaplan / detail
  34. Remove maybe uninitialized wanrings on gnu 8 — galbramc / detail
  35. last instantiation i promise — pcaplan / detail
  36. bug in cost model log-euclidean test because of the vertex/step matrix ordering — pcaplan / detail
  37. seriously this has to be the last one — pcaplan / detail
  38. last one! — pcaplan / detail
  39. trigger commit — pcaplan / detail
  40. up to p=2 for element space time test because it's really slow — pcaplan / detail
  41. Revamped Qauxv/parameters API. — shunz / detail
  42. Fixed typos — shunz / detail
  43. Propagated more changes in IBL parameter API.  Verified coupled IBL UniFIeld forced laminar case. — shunz / detail
  44. Fixed more tests related to IBL parameter API — shunz / detail
  45. Update test/system/AnalyticSolve/AnalyticSolve2D_DGAdvective_IBL_StagnationFlow_SingleElem_LamiBL_btest.cpp — shunz / detail
  46. Verified two system tests with PDEIBL2D using LF flux. — shunz / detail
  47. Fixed uncoupled IBL HDG case — shunz / detail
  48. 2D+T is running, working towards validation. — cfrontin / detail
  49. Added json parser to PyDict — galbramc / detail
  50. Fixed formatting from vera++. Also reformulated 2D+T case for convergence investigation. — cfrontin / detail
  51. switched from pure adv to AD for hypersonic. — cfrontin / detail
  52. 2D+T AD ST toy fix; need unit tests for BCAD2D.h — cfrontin / detail
  53. Fixed bugs in PDEIBLUniField — shunz / detail
  54. Lots of refactoring of AFLR4 and sansLIPAIM. All seems to be functioning. — galbramc / detail
  55. Minor fix — galbramc / detail
  56. Tweak to how AFLR is found — galbramc / detail
  57. Fixed compile error — galbramc / detail
  58. Update minimum boost version to 1.50 due to bug in property_tree json reader. — galbramc / detail
  59. Merged AFLR4 test into EGTessModel — galbramc / detail
  60. Fixed flux feedthrough for 2D+T AD. — cfrontin / detail
  61. More extensive try with sansLIPAIM — galbramc / detail
  62. Most sansLIP updates — galbramc / detail
  63. Fix MKL_PARDISO for transpose solves. Bug fix for AFLR3 — galbramc / detail
  64. Use static MKL libraries due to python issues — galbramc / detail
  65. Don't statically link in the ld library — galbramc / detail
  66. Increased timout time for HDG test — galbramc / detail
  67. Realzed timing on another test — galbramc / detail
  68. Refactored UniField IBL and ran it for forced and free transition problems — shunz / detail
  69. Played captured transition (forced and free) — shunz / detail
  70. Updated initial solution guesses for reformulated captured transition IBL — shunz / detail
  71. Unified system test on the case of uncoupled IBL laminar BL on airfoil — shunz / detail
  72. Refactored IBL numerical fluxes — shunz / detail
  73. Updated pyrite files for coupled coupled IBL cases with laminarBL+turbulentWake — shunz / detail
  74. Moved 2D+T convergence to Solve3D, made Adapt3D version adapt. — cfrontin / detail
  75. Typo fix. — cfrontin / detail
  76. Ran and added pyrite files for captured forced transition without using cut-cell machinery — shunz / detail
  77. push to hypersonic — pcaplan / detail
  78. Verified reasonable agreement between natural transition solution of UniField IBL using cut-cell against that using plain DG without cut-cell — shunz / detail
  79. Added recent-5 to Adapt3D 2D+T AD — cfrontin / detail
  80. Added MKL instantiation — shunz / detail
  81. Separate list of MKL static libraries — galbramc / detail
  82. Always link in MKL statically with sansLIPAIM — galbramc / detail
  83. Moved error message for sansLIP — galbramc / detail
  84. Building mpi all_reduce into FunctionalCell_Galerkin — galbramc / detail
  85. Added missing includes — galbramc / detail
  86. projection stabilization — arthuang / detail
  87. Minor edits — shunz / detail
  88. Changed default numerical flux — shunz / detail
  89. Added pyrite files for fitted transition of forced cases — shunz / detail
  90. Removed redundant cases — shunz / detail
  91. Minor updates — shunz / detail
  92. Added an alternative turbulent onset ctau value — shunz / detail
  93. Updates before running grid convergence on fitted transition — shunz / detail
  94. fixed a bug in PDEIBL source.  other minor fixes — shunz / detail
  95. Updated pyrtied files to fix the bug in PDEIBL lag source term introduced on 2018/11/02 in commit 9625612 — shunz / detail
  96. Tweaked a default setting for system test pyrite checks — shunz / detail
  97. Cleaned up system tests — shunz / detail
  98. Fixed free-forced nested solver logic for transition at element interface — shunz / detail
  99. Updated and cleaned up pyrite files — shunz / detail
  100. Updated an initial solution file for flow transition system tests — shunz / detail
  101. Renaming — shunz / detail
  102. minor updates — shunz / detail
  103. Added a to-do — shunz / detail
  104. added to-do — shunz / detail
  105. Refactored two system tests.  Added options to change transition model parameters on the fly — shunz / detail
  106. Fixed a bug/feature in an unimportant if statement — shunz / detail
  107. Cleanup — shunz / detail
  108. Cleaned up deprecated parts.  Fixed LF flux.  Refactored transition front source/flux.  Editted printout — shunz / detail
  109. Fixed uninitialized data in Flux_mitState_Nitsche for pure advective. — galbramc / detail
  110. Updated pyrite file after updating PDEIBL LFflux related stuff — shunz / detail
  111. Removed variable length arrays — galbramc / detail
  112. Replaced turbulent BL TS wave growth rate with the previous formulation of interpolating over turbulent sub-element, which makes cd vs ntcrit relation smooth.  Updated pyrite files for free transition — shunz / detail
  113. Minor refactoring — shunz / detail
  114. Fixed LFflux for IBLUniField.  Refactored test case and updated pyrite file — shunz / detail
  115. Missed a few variable length arrays — galbramc / detail
  116. One more warning — galbramc / detail
  117. Refactored PDEIBLUniField member field to allow for parameter ntcrit sweep.  Updated initial solution guess to be based on an existing IBL solution. — shunz / detail
  118. Fixed warnings — galbramc / detail
  119. Better cleanup of coverage information — galbramc / detail
  120. Don't build sandbox with nightly — galbramc / detail
  121. Clang analyzer should still build sandbox — galbramc / detail
  122. Revived gradation penalty. Needs lots of tweaks and studying — galbramc / detail
  123. Added unit test for 2D+T implementations. — cfrontin / detail
  124. Working on pentatope tests. — cfrontin / detail
  125. Changed scaling factor for objective — ursachi / detail
  126. Added 1D and 2D includes — ursachi / detail
  127. Updates for latest version of AFLR — galbramc / detail
  128. Gradation still needs more work... — galbramc / detail
  129. Fix compiler error — galbramc / detail
  130. Fixed arry bound typo in test — galbramc / detail
  131. more tests for orientations of tets in 4d — pcaplan / detail
  132. lingering changes — pcaplan / detail
  133. DG fields in 4d + unit tests — pcaplan / detail
  134. silly typo — pcaplan / detail
  135. can only use KF triangulation if avro is hooked in — pcaplan / detail
  136. Working on unit grids... — cfrontin / detail
  137. transferring — arthuang / detail
  138. Another formatting fix. — cfrontin / detail
  139. Another formatting fix. — cfrontin / detail
  140. minor editting — shunz / detail
  141. added modified diffusion matrix — arthuang / detail
  142. minor mod to proj stabilization — arthuang / detail
  143. Fix includes. — cfrontin / detail
  144. pre merge — hcarson / detail
  145. add proj stab matrices for 1DAD, stokes — arthuang / detail
  146. taking out some comments — arthuang / detail
  147. Taking the warning machete to things. — cfrontin / detail
  148. Refactored test case input — shunz / detail
  149. Udpates to sansLIPAIM to work with new CAPS dataTransfer setup — galbramc / detail
  150. system test for DG with pentatopes — pcaplan / detail
  151. Minor update — shunz / detail
  152. Added an option of wake ctau_eq but not used — shunz / detail
  153. moving to hyper branch — hcarson / detail
  154. MCMC flat plate for class — hcarson / detail
  155. forcing function for heating — hcarson / detail
  156. use SANS convention for trace orientation instead of the one used in avro — pcaplan / detail
  157. 1Ptope test working, fixed assumptions on nodal definitions. — cfrontin / detail
  158. fixed GLS? — arthuang / detail
  159. edit cmake list — arthuang / detail
  160. 2Tope unitgrid working, testcase working. — cfrontin / detail
  161. Turned off tesseract for push. — cfrontin / detail
  162. Light LIP tecplot files — galbramc / detail
  163. Smaller tecplot file for LIP — galbramc / detail
  164. Fix scoping issues. — cfrontin / detail
  165. Fixed warnings — galbramc / detail
  166. Added comment with origin of SVD3 algorithm — galbramc / detail
  167. handmade unit grid: 1 pentatope with 5 pentatope neighbours — pcaplan / detail
  168. allow all orientations of traces (1 to 12) in checkGrid — pcaplan / detail
  169. local grid extraction for pentatopes — pcaplan / detail
  170. cell to trace connectivity for pentatopes — pcaplan / detail
  171. finish implementation of element associativity of pentatopes — pcaplan / detail
  172. unit tests for local grid extraction around pentatopes (single pentatope and single pentatope surrounded by neighbours) — pcaplan / detail
  173. other minor changes — pcaplan / detail
  174. gradprojection working — arthuang / detail
  175. verified optimal order for 1DAD grad projection — arthuang / detail
  176. comm rank = 0 using xfield_lagrange — pcaplan / detail
  177. 24Ptope working, passing checkGrids(). test in progress. — cfrontin / detail
  178. remove duplicate unit grids in favour of handmade ones — pcaplan / detail
  179. warning fix — pcaplan / detail
  180. warning fix — pcaplan / detail
  181. 24Ptope unit grid working, tested and working. — cfrontin / detail
  182. commit so it ought to run for ben? — hcarson / detail
  183. Add duration to each build in Jenkins email. — galbramc / detail
  184. tweaks and the forcing — hcarson / detail
  185. full rank diffusive stabilizaiton — arthuang / detail
  186. actually making it not work — hcarson / detail
  187. changed the try catch for implied metric optimization to doing nothing rather than excepting. Also tweaks to MCMC file — hcarson / detail
  188. tweaks and removed a bunch of heap memory allocations — hcarson / detail
  189. added options to the quadratic — hcarson / detail
  190. more mods to projection stabilization — arthuang / detail
  191. undoing a lot of sketchy things — arthuang / detail
  192. rolling back more sketchy stuff — arthuang / detail
  193. mods for running with avro — hcarson / detail
  194. comment typos — hcarson / detail
  195. switching over to avro — hcarson / detail
  196. everything compiles, gotta track down unit tests — arthuang / detail
  197. getting unit tests to pass — arthuang / detail
  198. Reworked build of parmetis. refine uses parmetis. added avro build. — galbramc / detail
  199. minor edits to edge local unit tests — arthuang / detail
  200. Fixes for avro and refine — galbramc / detail
  201. Suppress warning — galbramc / detail
  202. Parallel Field4D test fixes. Give refine more time. — galbramc / detail
  203. Relaxed tolerance for intel — galbramc / detail
  204. Don't run ErrorOrder_4D in parallel — galbramc / detail
  205. Updated refine build — galbramc / detail
  206. Updated refine check — galbramc / detail
  207. Nightly build fixes... plus a stopgap ifdef until the SVDless 4D normal vector is done. — cfrontin / detail
  208. Reduce run time of 4D error order check — galbramc / detail
  209. Relaxed another tolerance — galbramc / detail
  210. trying out some edge stabilization — arthuang / detail
  211. MCMC things and got the temp sensors working — hcarson / detail
  212. Remove files written by avro — galbramc / detail
  213. Dissable refine testing for now — galbramc / detail
  214. Added memcheck to parmetis build — galbramc / detail
  215. Ignore external parmetis — galbramc / detail
  216. added hessian to interior trace — arthuang / detail
  217. edge stabilization working-ish? — arthuang / detail
  218. changing branch — hcarson / detail
  219. MC for running on hypersonic — hcarson / detail
  220. ready for running on hypersonic — hcarson / detail
  221. Generalized valgrind suppression — galbramc / detail
  222. moving to hypersonic again — hcarson / detail
  223. egads coords must have 3 dimensions even in 2d — pcaplan / detail
  224. the final files from the project — hcarson / detail
  225. forgot a function — hcarson / detail
  226. pushing to tucano — arthuang / detail
  227. Suppressed CMakeLists errors. [TBD] — shunz / detail
  228. Fixed panel metod tests — shunz / detail
  229. AFLR4 updates and some Jenkins scripts — galbramc / detail
  230. Link tetgen before avro — galbramc / detail
  231. instantation of elementlocal version of local splits for 4d...unit test will fail because the result is different than savi's convention — pcaplan / detail
  232. missing definitions for elementlocal & edgelocal — pcaplan / detail
  233. some instantiations of savi's method for doing local splits — pcaplan / detail
  234. xfield_lagrange method of doing local splits...still debugging...will fix later... — pcaplan / detail
  235. Refactoring.  Patched unit tests — shunz / detail
  236. More unit tests — shunz / detail
  237. added unit tests — shunz / detail
  238. Fixed unit tests — shunz / detail
  239. Fixed IBL unit tests — shunz / detail
  240. Added unit test.  Turned off unused methods. — shunz / detail
  241. Fixed a bug in CMakeLists: use of out-of-scope variable — shunz / detail
  242. Fixed a bug in cmake files that only appear when building with Xcode — shunz / detail
  243. Refactored ping test input array type.  Fixed IBL-related 4x4 block system ping tests.  Added missing MPI-related method definitions for pure virtural methods — shunz / detail
  244. Relocated code into SANS_MPI macros; otherwise, errors are raised about "member access to incomplete type" — shunz / detail
  245. Verified/fixed/cleaned IBL system tests with transition (full upwind). — shunz / detail
  246. Fixed duplicate naming of boost test suite — shunz / detail
  247. Relaxed pyrite tolerance — shunz / detail
  248. Updated forced-transition pyrite files after the bug fix in commit b30121ee5531d91e84aac94fbdab6462f458f4f8 — shunz / detail
  249. Turned off file dump — shunz / detail
  250. Fixed formatting — shunz / detail
  251. Fixed empty traling line — shunz / detail
  252. Fixed DG and HDG AES tests for uncoupled IBL — shunz / detail
  253. Fixed formatting — shunz / detail
  254. Reverted changes to (viscous) HDG stuff: those abandoned changes treated qfld and afld as a single bundle field — shunz / detail
  255. Update AlgebraicEquationSet_HDGAdvective_Advection_btest.cpp — shunz / detail
  256. Fixed one more test affected by ping test refactoring.  Fixed formatting and screen output — shunz / detail
  257. Fixed another system test affected by IBL Qauxv interpreter refactoring — shunz / detail
  258. Update ErrorOrder_1D_HDGAdvective_Advection_btest.cpp — shunz / detail
  259. Fixed warning and missing instantiation — shunz / detail
  260. Added an instantiation just for completeness, although it is no longer used — shunz / detail
  261. moving towards adjoint GLS — arthuang / detail
  262. Cleaned sandbox cases — shunz / detail
  263. relaxed tolerances for clang_release — shunz / detail
  264. Suppressed output — shunz / detail
  265. Fixed bugs in CMakeLists — shunz / detail
  266. Fixed HDG advection tests — shunz / detail
  267. Removed the pure advection test case using (viscous) HDG machinery — shunz / detail
  268. parallel outputs in galerkin solver interface, AGLS error estimation fixed? — arthuang / detail
  269. Refactored halving line search and fixed unit tests — shunz / detail
  270. Fixed memory errors — shunz / detail
  271. Relaxed tolerance for intel — shunz / detail
  272. relaxed tolerances for intel18 — shunz / detail
  273. Relaxed timeout limits — shunz / detail
  274. Speed up unit tests in response to Jenkins timeout — shunz / detail
  275. Fixed typo — shunz / detail
  276. Relaxed tolerance for gnu48 — shunz / detail
  277. Tried to fix timeout on Jenkins testing (coverage_clang reynolds) — shunz / detail
  278. Reverted CMakeLists to see if TIMEOUT is set properly this time on Jenkins — shunz / detail
  279. minor refactoring — shunz / detail
  280. Refactored CMakeLists for Xcode build — shunz / detail
  281. Refactored Newton solver — shunz / detail
  282. Minor fix — shunz / detail
  283. Fixed warnings — shunz / detail
  284. Added IBL max update fraction — shunz / detail
  285. Enabled under-relaxed Newton update for coupled 4x4 block system of IBL with free transition. — shunz / detail
  286. Refactor of avro XField interface — galbramc / detail
  287. Consistent logic for setting cmake testing timout property — galbramc / detail
  288. Fixed refine interface change — galbramc / detail
  289. Fix ifdef when not using avro — galbramc / detail
  290. More fixes to deal with avro — galbramc / detail
  291. Minor cleanup — galbramc / detail
  292. Added unit tests for IBL updateFraction — shunz / detail
  293. Upgrade PETSc — galbramc / detail
  294. More avro and PETSc tweaks — galbramc / detail
  295. I don't understand why dl library is needed to link a static library... — galbramc / detail
  296. Fix for refine check — galbramc / detail
  297. Suppress compiler warning when building PETSc — galbramc / detail
  298. Fix for avro with 4D — galbramc / detail
  299. Enable refine testing again — galbramc / detail
  300. Updated copyright date to 2019 — galbramc / detail
  301. Updated copyright date to 2019 — galbramc / detail
  302. dimension-independent local splits — pcaplan / detail
  303. timing tests show dim-independent implementation on par with savithru's impl...tried to debug hugh's local xfield in primal mode but something is wrong...unit tests on the way — pcaplan / detail
  304. adding stabilized error estimation infrastructure — arthuang / detail
  305. more playing with AGLS — arthuang / detail
  306. minor edits — arthuang / detail
  307. reconciling merge conflicts and some tweaks — hcarson / detail
  308. license updates — hcarson / detail
  309. fixes to match avro — hcarson / detail
  310. forgot to add the avro defined precompile check — hcarson / detail
  311. relaxed tolerances and forgot to split world — hcarson / detail
  312. tweaking tol again... — hcarson / detail
  313. another tweak... — hcarson / detail
  314. cleanup of localpatch + commenting — pcaplan / detail
  315. copyright — pcaplan / detail
  316. more copyright — pcaplan / detail
  317. Updates for MOESS optimizations. Still needs more work. — galbramc / detail
  318. Instantiations for 4D AD solve. — galbramc / detail
  319. A few fixes — galbramc / detail
  320. Compile fixes — galbramc / detail
  321. More instantiations for 4D — galbramc / detail
  322. removed anachronistic definition of primal grid. Primal grid now matches the behavior of the normal DG grids. Unit tests have just been turned off in the meantime — hcarson / detail
  323. make sure mpi is init'd before calling rank by actually running in parallel — pcaplan / detail
  324. revert back to dual — pcaplan / detail
  325. ifdef SANS_AVRO for tests with CKF triangulation — pcaplan / detail
  326. changed to Dual in the system test — hcarson / detail
  327. attempted to fix nightly tests — shunz / detail
  328. Relaxed timings, fixed warning — galbramc / detail
  329. Updated pyrite files to fix nightly tests — shunz / detail
  330. Moved timing test into sandbox — galbramc / detail
  331. Cleanup of refine interface with auto memory management. — galbramc / detail
  332. Modest progress on instantiations. — cfrontin / detail
  333. Fix include — galbramc / detail
  334. 4D box unit grid grandfathered out of XField_KuhnFreudenthal. — cfrontin / detail
  335. added fix to 3D — hcarson / detail
  336. removed the separate 4D file, just added an instantiate at the end of 3D — hcarson / detail
  337. p=7 led to error close to machine zero, which seemed to cause touble to nightly ErrorOrder test.  Cut back p from 7 to 6 — shunz / detail
  338. p=6 still too high for pyrite test for ErrorOrder — shunz / detail
  339. Attempted to warning "use of zero-allocated memory" — shunz / detail
  340. Some cleanup in the sandbox. Added 2D L2Project adaptation — galbramc / detail
  341. Added tecplot dump for metric fields. Other small fixes — galbramc / detail
  342. Changed floor to round for generating new 1D mesh — ursachi / detail
  343. Minor refactoring — shunz / detail
  344. Compile fixes and more dependency warning suppressions — galbramc / detail
  345. Add dl library for avro — galbramc / detail
  346. Replaced nt transport equation with G variable as in SciTech paper, although the results are equivalent — shunz / detail
  347. bits and pieces — hcarson / detail
  348. added linear args and a test — hcarson / detail
  349. just wanna get my stuff in the repo — pcaplan / detail
  350. Files for parallel periodic XField2D_Box_Triangle_Lagrange (Issues need to be fixed) — kug46 / detail
  351. retrieve edge indices and sub elems from split — pcaplan / detail
  352. ref coordinates on split sub cells — pcaplan / detail
  353. Added a layer of abstractions when evaluating fluxes, sources etc. in IBL pde class — shunz / detail
  354. Fixed formatting... previously went under the radar since vera++ was not installed locally... — shunz / detail
  355. inst of some 4d adaptation things — pcaplan / detail
  356. Added scalar and dot product fixes for MatrixSymS — galbramc / detail
  357. Working on 3d ST... — cfrontin / detail
  358. Enabled smooth laminar/turbulent blending — shunz / detail
  359. Fixed SVD calculation for normal vector for 4D tet. — cfrontin / detail
  360. Scrubbed some comments. — cfrontin / detail
  361. edits to gls error estimation — arthuang / detail
  362. unit tests for basis function ref elem split — pcaplan / detail
  363. 4d adapt? — pcaplan / detail
  364. Fixed intel errors by relaxing tolerance and reconciling a missing pyrite file specialized for intel MKL — shunz / detail
  365. added a Field weighted stabilized CG nodal estimate integrand test in 2D — hcarson / detail
  366. comment — hcarson / detail
  367. Continued work on ElementXField implementations. — cfrontin / detail
  368. Vera fixes, COPYRIGHT fixes, and some avro preprocessor fixes. — cfrontin / detail
  369. Updates for 2D L2 Projection sandbox test — galbramc / detail
  370. Updates for 1D L2 Projection sandbox test — galbramc / detail
  371. Clearing out high-level exceptions whose low-level implementations are done. — cfrontin / detail
  372. Added last bits of ADST4D case, should run (?) now. — cfrontin / detail
  373. Added new trace free step matrix error model. Not enabled. — galbramc / detail
  374. added a 2D error estimate test, and asserted assumption on basis function type — hcarson / detail
  375. Fix. — cfrontin / detail
  376. fixed the estimate vary tests — hcarson / detail
  377. notebook with Double BL exact solutions — hcarson / detail
  378. forgot the copyright change — hcarson / detail
  379. Normalize MOESS optimization with nlopt — galbramc / detail
  380. Fixed undefined reference — galbramc / detail
  381. Fixed a bug in laminar/turbulent blending function — shunz / detail
  382. ifdef SANS_AVRO requirements in unit tests. — cfrontin / detail
  383. removed the scp to devastator. Should be useful for everyone now — hcarson / detail
  384. forgot to change a quadratic function explicit constructor — hcarson / detail
  385. undoing a print — hcarson / detail
  386. EQUILATERAL PENTATOPE coordinates + added unit volume check in unit test to catch this — pcaplan / detail
  387. unit test for split ref step matrix on pentatopes + generating matlab script — pcaplan / detail
  388. unit tests for error model — pcaplan / detail
  389. 4D L2 ERROR ADAPTATION WORKS...cleaning up........ — pcaplan / detail
  390. Added new MOESS optimization without global FrobNorm — galbramc / detail
  391. Forgot CMake file — galbramc / detail
  392. CG artificial viscosity in 2D — blsc / detail
  393. Small fix for cmake summary — galbramc / detail
  394. Weekly test fixes — galbramc / detail
  395. Modified AlgEqSet, IntegrandInteriorTrace and 2D DGAdvective toy for Parallel 2D Periodic Grids — kug46 / detail
  396. Towards parallel PETSc/TAO — galbramc / detail
  397. Refactored intermittency calculation — shunz / detail
  398. Generailized Projection to Qauxi to handle blended intermittency. — shunz / detail
  399. Trying to bump coverage. — cfrontin / detail
  400. Some cleanup of logEuclidian cost — galbramc / detail
  401. Added lagrange P1 to the exception — hcarson / detail
  402. copywrite update for some files — arthuang / detail
  403. Various small fixes — galbramc / detail
  404. added a Tanh2 function based on Loseille's Tanh3 — hcarson / detail
  405. Updated Embedding unit test for quadrature integration — galbramc / detail
  406. Reverted to binary intermittency as default — shunz / detail
  407. Relaxed tolerance for intel compiler.  Restored default to binary intermittency for existing tests — shunz / detail
  408. Trying to get coverage... — cfrontin / detail
  409. Tests added + un-tested, unused additions removed. — cfrontin / detail
  410. Added comments and made sure ADST4D case is ready for parallelization. — cfrontin / detail
  411. More parallel fixes. — cfrontin / detail
  412. Relaxed torleranc for gnu48 — shunz / detail
  413. More parallel fixes. — cfrontin / detail
  414. Added regularized point source to accommodate potential co-existence of free and forced transition in the captured transition treatment — shunz / detail
  415. Updated ADST3D cases (solve and adapt) for avro and MPI use. — cfrontin / detail
  416. Forgot an MPI redefine. — cfrontin / detail
  417. jk MPI fix actually this time. — cfrontin / detail
  418. Minor fix — galbramc / detail
  419. Continued avro- and MPI-ification. — cfrontin / detail
  420. Unit testing fixes. — cfrontin / detail
  421. Fixed warning. — cfrontin / detail
  422. Fixed fstream initializer. — cfrontin / detail
  423. Warning cleanup... — cfrontin / detail
  424. Fixes towards parallel+periodic — galbramc / detail
  425. Coverage improvement... — cfrontin / detail
  426. cleanup of interface to match savithru's — pcaplan / detail
  427. instantiation of 4d savithru splits (technically the extraction works because that's what i started with but the actual split does not) — pcaplan / detail
  428. Fixes for running parallel DG with periodic BCs — galbramc / detail
  429. Removed adapt4d skeleton from build. — cfrontin / detail
  430. Added instantiation — galbramc / detail
  431. ffs — cfrontin / detail
  432. instantiate SVD (with error), XField_Local calls XField_LocalPatch in 4d which local_split_patch is turned off — pcaplan / detail
  433. ifdef sans avro in sandbox file — pcaplan / detail
  434. instantiation of new MOESS SANS optimizer for 4d — pcaplan / detail
  435. experimenting w p1 adjoint — arthuang / detail
  436. adapt3d change in api — pcaplan / detail
  437. relaxed tolerance for system test — pcaplan / detail
  438. publicize error model functions...still not sure why — pcaplan / detail
  439. added note about protected methods for error model class — pcaplan / detail
  440. missing operator for 1d function — pcaplan / detail
  441. unprotected from SANS_AVRO avro namespace use — pcaplan / detail
  442. rename file to avoid copyright check — pcaplan / detail
  443. deleted file — pcaplan / detail
  444. Only have vera look at .cpp and .h files — galbramc / detail
  445. SANS_CHECK_CLOSE not BOOST_CHECK_EQUAL for floats, come on philip — pcaplan / detail
  446. bug != in shock capturing — arthuang / detail
  447. revert back to formulation — arthuang / detail
  448. add expt stab (no-op) to 2DAD — arthuang / detail
  449. Added a C2 continuous smooth abs — hcarson / detail
  450. fix intel compiler warning — pcaplan / detail
  451. add pending changes in local patch header — pcaplan / detail
  452. Run SANS_Commit in parallel — galbramc / detail
  453. Cannot specify format for 'time' on all systems — galbramc / detail
  454. Updates to SANS_Commit.sh — galbramc / detail
  455. One more parallel fix — galbramc / detail
  456. Forgot to run 'make all' — galbramc / detail
  457. Fix make warning for now — galbramc / detail
  458. dev exceptioned code required only for 4d tecplot. — cfrontin / detail
  459. added a C2 smoothabs and matlab file that generated — hcarson / detail
  460. actually got the smoothmax1, smoothmax2 functions work, also added implicitly defined smoothmin1 and smoothmin2 — hcarson / detail
  461. merge fix — cfrontin / detail
  462. merge fix 2 — cfrontin / detail
  463. working on new error models — hcarson / detail
  464. ASExpCombo function for testing L2 — hcarson / detail
  465. Revive Adapt L2Project — galbramc / detail
  466. partial cleanup of local patch before supporting CG patches — pcaplan / detail
  467. Removed PBAM — galbramc / detail
  468. fix for jenkins, smoothmax2, tweaks to SANS opt and the VectorX hack to work with Phil — hcarson / detail
  469. unparallelized a test, there's a bug in P4 Hierarchical parallel — hcarson / detail
  470. turning the P3 and P4 unsplit tests off again. There's something weird and MPI-ish going wrong here — hcarson / detail
  471. Missed one include — galbramc / detail
  472. Missed one more file — galbramc / detail
  473. more cleanup of local patch — pcaplan / detail
  474. Suppress valgrind avro+intel strange warnings — galbramc / detail
  475. Broke up DGBR2lib trying to reduce compile time — galbramc / detail
  476. pre merge — hcarson / detail
  477. support for CG local solves with XField_LocalPatch — pcaplan / detail
  478. forgot to propagate changes in function names to tests — pcaplan / detail
  479. turnon off local patch splits for jenkins — pcaplan / detail
  480. silence warning — pcaplan / detail
  481. Switched implied metric optmizer to MMA — galbramc / detail
  482. agls tweaks — arthuang / detail
  483. Relaxed tolerance — galbramc / detail
  484. complete unit tests for xfield local patch...still need some work on CG tests — pcaplan / detail
  485. merge conflict — hcarson / detail
  486. a stupid bug — hcarson / detail
  487. changes to optimizers, and also turning the modified model back off — hcarson / detail
  488. Fix work weekly — galbramc / detail
  489. Weekly suppression and revived cotire — galbramc / detail
  490. Fixed the last error. — galbramc / detail
  491. Fixed a warning — galbramc / detail
  492. Added option to use CG field for PTC time step — galbramc / detail
  493. Changed the span of the SANS frob norm penalty function — galbramc / detail
  494. unit tests for DG/CG patches — pcaplan / detail
  495. remove print_inline — pcaplan / detail
  496. Conical method of stroud added, and working. Still needs integration into pentatope. — cfrontin / detail
  497. Added a ego map to EGTessModel that maps from All egos to Unique egos — galbramc / detail
  498. add xfield for full potential code using avro — pcaplan / detail
  499. Integrated Stroud into 4D quadrature. — cfrontin / detail
  500. cleanup avro wake3d — pcaplan / detail
  501. Fixed compile error — galbramc / detail
  502. Fixed another compile error — galbramc / detail
  503. work towards high-order support for local patch split — pcaplan / detail
  504. getting unit tests to pass... — arthuang / detail
  505. fixing merge conflicts — arthuang / detail
  506. Fix up PseudoTime_btest — galbramc / detail
  507. Fixed btest memory leak. — cfrontin / detail
  508. Improved stroud testing. — cfrontin / detail
  509. experimenting with an element based local solve — arthuang / detail
  510. BCNone is dead. Long live BCNone. — hcarson / detail
  511. New Implied Metric optimizer based on logM. Various other small fixes. — galbramc / detail
  512. elemID must be global — pcaplan / detail
  513. support for high-order local patch — pcaplan / detail
  514. ifdef avro — pcaplan / detail
  515. Updates for CG 3D Euler with shock capturing and 2D RANS — blsc / detail
  516. multiple def from copy paste — pcaplan / detail
  517. uninitializaed data fix (typo) — cfrontin / detail
  518. changes to error model interface for high-order local splits — pcaplan / detail
  519. Removing problematic instantiations due to wall distance parameter with artificial viscosity for RANS — blsc / detail
  520. add info as to which type of field is being sampled — pcaplan / detail
  521. Removing code from BCEuler3D_mitState.h which was ifdef'd out — blsc / detail
  522. added integer template for equation number — hcarson / detail
  523. typo in avro wake — pcaplan / detail
  524. specialized wake model not defined without avro — pcaplan / detail
  525. added an ND test of the BCNone with and without useFluxViscous — hcarson / detail
  526. Galerkin folder passes — hcarson / detail
  527. added the downcast to NoneBC to extract the boolean — hcarson / detail
  528. converted HDG over to the new Nones — hcarson / detail
  529. Updated implied metric for TAO. Fixed a number of floating point problems. — galbramc / detail
  530. More robust testing, compiler warning silencing. — cfrontin / detail
  531. dont inherit from xfield_avro if not defined — pcaplan / detail
  532. still missing some ifdef — pcaplan / detail
  533. Various compile fixes. Generalized Adapt2D_Mesh_Optimize for all mesh generators. — galbramc / detail
  534. Missed one — galbramc / detail
  535. Warning fixes — galbramc / detail
  536. killed a few more BCTypeNone references, just plugging away — hcarson / detail
  537. pre merge — hcarson / detail
  538. Removed the BCNoneUniField — hcarson / detail
  539. Added switching for expensive PI quadrature/low-cost NI quadrature. Fixed associated tests to get correct convergence rates. — cfrontin / detail
  540. committing sandbox pre-merge — arthuang / detail
  541. someone forgot to actually use the W and B typedefs — hcarson / detail
  542. missing include — hcarson / detail
  543. fixed the CMakeLists.txt — hcarson / detail
  544. made BCNone_AV to do with annoying ArtVisc feature — hcarson / detail
  545. missing includes and last bit — hcarson / detail
  546. fixed typo: derived to dervied — hcarson / detail
  547. vera slap correction — hcarson / detail
  548. Fixed one more BCNone — galbramc / detail
  549. forgot a file — hcarson / detail
  550. Removing more of the block artificial viscosity stuff in 2D and unit test updates — blsc / detail
  551. More merge conflicts — blsc / detail
  552. More merge conflict resolution — blsc / detail
  553. Fixed memory leak. — cfrontin / detail
  554. used quadrature cache for L2 projection — pcaplan / detail
  555. fix for order = 0 integration — pcaplan / detail
  556. New cost target for SANS MOESS optimizer. Lots of work towards avro+Wakes. — galbramc / detail
  557. Fixed typo — galbramc / detail
  558. Minor fixes — galbramc / detail
  559. One more typo — galbramc / detail
  560. Unit test updates — blsc / detail
  561. Helps to use consistent array size — galbramc / detail
  562. Updates to jenkins scripts — galbramc / detail
  563. Segregating MeshAdapter — galbramc / detail
  564. Missing instantiation — blsc / detail
  565. Fixed mistake in BuildAVRO — galbramc / detail
  566. Fixes for 3D CG case with artificial viscosity — blsc / detail
  567. Fixed compile issues related to separating dimensions — galbramc / detail
  568. Initializing variables to fix some compiler warnings — blsc / detail
  569. LU factorization on processors so PETSc solves reliably — blsc / detail
  570. Missed a few — galbramc / detail
  571. IRS updates — blsc / detail
  572. Fix for gnu 4.8 — galbramc / detail
  573. Refactored tecplot output to reduce link time — galbramc / detail
  574. Forgot files — galbramc / detail
  575. Fixed muliple instantiations — galbramc / detail
  576. pre merge — pcaplan / detail
  577. Syncing with hypersonic — blsc / detail
  578. reverting a dead end — arthuang / detail
  579. Adapt4D de-mothballing. — cfrontin / detail
  580. Fixed 'potential' memory leak problem by putting frees in same scope as creation. — cfrontin / detail
  581. Suppress cppcheck bug — galbramc / detail
  582. tweaked AGLS setup, hope this one gets through!! — arthuang / detail
  583. AGLS formulation w/ correction getting good rates! push to laptop, need to fix unit tests — arthuang / detail
  584. unit tests should be working... — arthuang / detail
  585. pre merge — hcarson / detail
  586. Another cppcheck suppression — galbramc / detail
  587. clean up on choosing reSolve groups — hcarson / detail
  588. some clean up — hcarson / detail
  589. added a virtual method for computing Initial Error. The default version has the overhead of a solve associated, whereas the SolverInterface version has the cheaper version that avoids the solve and thus is more robust — hcarson / detail
  590. parameter for avro to allow for interior boundaries needed for wake models — pcaplan / detail
  591. unit tests ready to go — arthuang / detail
  592. Adding 4D Legendre basis for Adapt4D + error estimates. — cfrontin / detail
  593. cmake addition of 4d legendre... still not finished though. — cfrontin / detail
  594. oops — cfrontin / detail
  595. don't use Philip's split for now — arthuang / detail
  596. add nb for output correction — arthuang / detail
  597. got rid of a unnecessary sandbox, updated other test — arthuang / detail
  598. One less call to checkGrid for curved LocalPatch — galbramc / detail
  599. More IRS stuff — blsc / detail
  600. moved metric conformity to separate file — pcaplan / detail
  601. tried to assess metric conformity and re-adjust target cost but simpler to just ask the mesher and have inner loop on adaptations to control target cost — pcaplan / detail
  602. pushing to hypersonic — arthuang / detail
  603. some fixes to actually use the volume factor... — pcaplan / detail
  604. new elemental error estimate for CG, not especially tested but seems to be ok — hcarson / detail
  605. more tweaks to cases — hcarson / detail
  606. Add static caching for pentatope quadrature. — cfrontin / detail
  607. Set edge length bound = 1 for 1D — ursachi / detail
  608. Added exponential and maxcubic functions — ursachi / detail
  609. 1D test cases — ursachi / detail
  610. std::stringstream has a surprisingly expensive constructor — galbramc / detail
  611. Fixed formatting — galbramc / detail
  612. Added missing copyright — galbramc / detail
  613. Added missing includes — galbramc / detail
  614. include set — pcaplan / detail
  615. merge — pcaplan / detail
  616. still default to savithru's local split — pcaplan / detail
  617. protect quadrature tests with use_conical — pcaplan / detail
  618. Deleted unnecessary includes — ursachi / detail
  619. changes to make avro grids compile again — hcarson / detail
  620. cleanup and forgotten files — hcarson / detail
  621. Progress towards avro+Wakes. Added intel19 to jenkins env. — galbramc / detail
  622. Quadrature fix. — cfrontin / detail
  623. Added Legendre4D Bases. — cfrontin / detail
  624. Adapt4D ADST should *start*. — cfrontin / detail
  625. Remove files dumped by avro — galbramc / detail
  626. Fixed missing parameter checks — galbramc / detail
  627. Improved speed of XField_LocalPatch — galbramc / detail
  628. Allow longer time for slow test — galbramc / detail
  629. debug CG local patch — pcaplan / detail
  630. Update UniqueTrace to use UniqueElem — galbramc / detail
  631. Added 4D pentatope Legendre unit tests. — cfrontin / detail
  632. Complete Legendre 4D test. — cfrontin / detail
  633. Actually this time. — cfrontin / detail
  634. Universalized legendre max order, refactored variable. — cfrontin / detail
  635. first errormodel additions. — cfrontin / detail
  636. Updating the delta wing case — galbramc / detail
  637. Fixed compile errors — galbramc / detail
  638. reference element tested and ready to fly. — cfrontin / detail
  639. More compile fixes for DeltaWing. avro works again with it. — galbramc / detail
  640. Skip blank backtrace numberes. Lots of work towards avro+Wakes — galbramc / detail
  641. Fixed test for lagrange basis function spacetime, moving coords to inherited class from base class. — cfrontin / detail
  642. warning fix, you dumbass\! — cfrontin / detail
  643. Fixed up hashing and added unit tests for UniquElem — galbramc / detail
  644. fixed cross-machine tolerancing issue. — cfrontin / detail
  645. Lots of fixes for avro+Wakes — galbramc / detail
  646. Don't dump file — galbramc / detail
  647. pre merge — hcarson / detail
  648. Reduce testing in MOESS_Gradation_Optimizer_NLOPT_btest — galbramc / detail
  649. new and improved AGLS formulation — arthuang / detail
  650. premerge — pcaplan / detail
  651. Use operator() to modify avro topologyDup — galbramc / detail
  652. Add backtrace info to singular matrix. Enable VERA_ERROR for all builds with SANS_Commit.sh — galbramc / detail
  653. Quadrature fixes — galbramc / detail
  654. Removed unnecessary line — galbramc / detail
  655. Add vera to CentOS and Rhel. Undo some fixes. — galbramc / detail
  656. Added boost to LD_LIBRARY_PATH on CentOS — galbramc / detail
  657. Guard against negative nodal metrics from ImpliedMetic optimizer — galbramc / detail
  658. Updated avro and refine build to work with .tgz files — galbramc / detail
  659. Updated build of lapack and avro build to use SANS lapack — galbramc / detail
  660. Forgot to remove test hack — galbramc / detail
  661. Fixed mistake in FindLAPACK — galbramc / detail
  662. Add more diagnostics to Jacobian failure with RefCoordSolver — galbramc / detail
  663. More debug info for singular RefCoordSolve — galbramc / detail
  664. Missing include — galbramc / detail
  665. GRRRRRRRRRRRRRRRR CELL GROUP 1 NEEDS  TO BE ADDED TO RESOLVE CELL GROUPS FOR CG GRRRRRRRRRR (╯°□°)╯︵ ┻━┻ — pcaplan / detail
  666. got rid of hackery — pcaplan / detail
  667. extra space — pcaplan / detail
  668. Working towards scale invariant DenseLinAlg solves — galbramc / detail
  669. line unit test should really allow edge split since its the same as an iso split, vera fixes too — pcaplan / detail
  670. cleanup of unused debugging stuff...what a colossal waste of time — pcaplan / detail
  671. trailing whitespace — pcaplan / detail
  672. Update vera to remove scripts when warn/error is changed. Add limits inlcude where numeric_limits is used. — galbramc / detail
  673. reverting to new AGLS formulation — arthuang / detail
  674. reverting to not use Philip's split to get thru Jenkins — arthuang / detail
  675. silence warning — pcaplan / detail
  676. Updates to CMake files — savithru / detail
  677. Fix quadrature memory leak again — galbramc / detail
  678. trying to solve pivot problem... not yet though. — cfrontin / detail
  679. added assert grid. Wraps check grid in a try-catch and return true if it passes. Can use in places where checkGrid can be removed in Release mode — hcarson / detail
  680. pre merge — hcarson / detail
  681. Updates so avro+Wake appears to be working — galbramc / detail
  682. fixed ReferenceElement constraint jacobian assignment ya dingus. — cfrontin / detail
  683. fixed ReferenceElement constraint jacobian assignment ya dingus, pt. II: unit testing boogaloo — cfrontin / detail
  684. Removed pivoting change that was dumb anyway. — cfrontin / detail
  685. Combined into one file — ursachi / detail
  686. sandbox updates — arthuang / detail
  687. moving towards rans adaptive cg — arthuang / detail
  688. RANS test case working — arthuang / detail
  689. rans joukowski working for real? — arthuang / detail
  690. Fixed link errors — galbramc / detail
  691. More fixes for avro+Wake. Needs some more checks. — galbramc / detail
  692. Forgot files — galbramc / detail
  693. Fixed compile error — galbramc / detail
  694. Split up the Adaptation library by dimension — galbramc / detail
  695. Compile error fix — galbramc / detail
  696. Fix link errors — galbramc / detail
  697. Another link error — galbramc / detail
  698. Migrated single boundary layer scalarfunction from 4D to 3D+T — cfrontin / detail
  699. Remove debug files — galbramc / detail
  700. Don't run avro with wakes due to failing debug dumps in avro — galbramc / detail
  701. Split avro Wake edges that span the entire wake — galbramc / detail
  702. Trying to split segments on wakes, but I need help... — galbramc / detail
  703. Fail depends tests if files are generated — galbramc / detail
  704. Reworking MOESS to use Field_CG — galbramc / detail
  705. revert away from Philip's local split — arthuang / detail
  706. update error estimate unit test — arthuang / detail
  707. unused variable — arthuang / detail
  708. added gravity to 2D two phase case — ericdow / detail
  709. New parameters for new EPIC 10.3 executable — galbramc / detail
  710. More reworking of MOESS — galbramc / detail
  711. More cleaning of MOESS — galbramc / detail
  712. Fix ccache path for SANS_Depend tests — galbramc / detail
  713. Another script fix for depends — galbramc / detail
  714. catch invalid split for high-order — pcaplan / detail
  715. Lots more work towards refactored MOESS — galbramc / detail
  716. More work on MOESS — galbramc / detail
  717. updated ADST cases. — cfrontin / detail
  718. MOESS refactoring to use fields seems to be done. — galbramc / detail
  719. Fixed includes — galbramc / detail
  720. Fixed parallel print statement — galbramc / detail
  721. SANS optimizer was using wrong initial step matric. — galbramc / detail
  722. Fixed bug in edge length deviation — galbramc / detail
  723. Minor fixes — galbramc / detail
  724. More ping tests — galbramc / detail
  725. Split up ProjectGlobalField — galbramc / detail
  726. Asymmetric cost schedule — galbramc / detail
  727. CMake updates — galbramc / detail
  728. continued working on debugging two phase gravity fluxes — ericdow / detail
  729. TAO implied metric calculation works in parallel — galbramc / detail
  730. Fix typo — galbramc / detail
  731. Remove mesh_0.json from tests with avro — galbramc / detail
  732. More work towards parallel MOESS with TAO — galbramc / detail
  733. Some compile fixes — galbramc / detail
  734. Synchronize error models in ghost/zombie cells — galbramc / detail
  735. Parallel MOESS is very close — galbramc / detail
  736. Link error fixes — galbramc / detail
  737. Some small fixes — galbramc / detail
  738. working out RANS stabilization terms — arthuang / detail
  739. pre merge — hcarson / detail
  740. Stole MMA from NLopt to parallelize with TAO. — galbramc / detail
  741. Added paralel serial equivalence test for MOESS TAO-MMA — galbramc / detail
  742. If I TAO+MMA does not wory, try MMA+MPI — galbramc / detail
  743. oliver test is running, not getting right rates yet — arthuang / detail
  744. Added artificial viscosity to tilted reservoir test case — savithru / detail
  745. version used in the git bisect — hcarson / detail
  746. refactored stabilized CG — arthuang / detail
  747. more robust quadrature tests, shouldn't have issues with quadrature caching. — cfrontin / detail
  748. push to laptop in the middle of updating RANSSA — arthuang / detail
  749. missing term for adjoint in RANSSA.. needs unit testing — arthuang / detail
  750. rans sourcegradientjacobiangradient thoroughly unit tested — arthuang / detail
  751. Added pressure integral output for two-phase. Modified tilted reservoir test-case. — savithru / detail
  752. Parallel MMA algorithm! — galbramc / detail
  753. Forgot the unit test — galbramc / detail
  754. and the actual files — galbramc / detail
  755. more forgotten files — galbramc / detail
  756. Some vera fixes — galbramc / detail
  757. took out demote surreal — arthuang / detail
  758. unit tests updated for stabilized integrand — arthuang / detail
  759. changes to error model to use order scaling in the regularization — hcarson / detail
  760. A number of fixes for parallel MOESS — galbramc / detail
  761. copyright notice fix — hcarson / detail
  762. fixing a function that got mangled somehow/sometime — hcarson / detail
  763. license error — hcarson / detail
  764. Updated ErrorModel_Element unit test — galbramc / detail
  765. Fixed warning and relaxed tolerance — galbramc / detail
  766. More minor fixes — galbramc / detail
  767. Added another derivative of St option — galbramc / detail
  768. Really really relaxed tolerance for Parallel/Serial equivalence for TAO with Intel... not sure whats up with that... — galbramc / detail
  769. updates to strongform integrand — arthuang / detail
  770. added needed hooks to 3D for stabilized CG — arthuang / detail
  771. Nightly fixes — galbramc / detail
  772. Trying to improve the speed of XField_Lagrange — galbramc / detail
  773. add RANS ndconvert omterface — arthuang / detail
  774. fixed up RANS asymptotic — arthuang / detail
  775. added trace on scalar, bug in new source fcn in 3d — arthuang / detail
  776. fixed unit test, mod source — arthuang / detail
  777. new adjoint analytic function for 1D BL — arthuang / detail
  778. added needed hooks for AV, implementation will be needed — arthuang / detail
  779. getting unit tests to pass — arthuang / detail
  780. working on RANS... — arthuang / detail
  781. relax tol on unit test — arthuang / detail
  782. truly linear adjoint — arthuang / detail
  783. caught some bugs, put in unit tests — arthuang / detail
  784. pre merge — hcarson / detail
  785. Quadrature fix on AD3DST. — cfrontin / detail
  786. AD4DST refactor. — cfrontin / detail
  787. orthodoxy is unconsciousness. — cfrontin / detail
  788. quadrature fixes — cfrontin / detail
  789. AD4D update. — cfrontin / detail
  790. Fixed some analyzer warnings — galbramc / detail
  791. One more analyzer suppression — galbramc / detail
  792. Some MPI cleanup — galbramc / detail
  793. target dof factor — pcaplan / detail
  794. always forget to switch local split — pcaplan / detail
  795. horizontal tab — pcaplan / detail
  796. wake tests were originally off — pcaplan / detail
  797. Finalized moving nDOFpossessed to Field — galbramc / detail
  798. Added missing include — galbramc / detail
  799. settings for Marshall to run — hcarson / detail
  800. Fixed a bug in PTC residual indexing — shunz / detail
  801. Add debug information for MassMatrix singular matrix errors — galbramc / detail
  802. fixes to mesh adapt — hcarson / detail
  803. Missing include — galbramc / detail
  804. Enabled daisy chain in algebraic equation set class for PTC.  Refactored (and hopefully clarified) calculation of pseudo-transient contributions to residuals and jacobians — shunz / detail
  805. Fixed a bug in PTC AES's cell group integration calls, and a bug in residualPseudoTemporal daisy-chain call — shunz / detail
  806. Enabled PTC for coupled IBL of 4x4 block system — shunz / detail
  807. Updated unit test — shunz / detail
  808. CG RANS is looking more promising... — arthuang / detail
  809. loops in rans joukowski — arthuang / detail
  810. One more missing include — galbramc / detail
  811. fixes for jenkins — hcarson / detail
  812. fixed excessively small initial case... now starting from predicted uniform box size. — cfrontin / detail
  813. Added solve4d smart dof case. — cfrontin / detail
  814. added hooks for BICGStab — arthuang / detail
  815. Speed improvements for UniqueElem and XField_Lagrange — galbramc / detail
  816. Purged matrix manipulation Nishida hack — galbramc / detail
  817. fixed test to match ErrorModel_Elemental.h — hcarson / detail
  818. One move too many — galbramc / detail
  819. playing around with stabilization — arthuang / detail
  820. RANS with scaling — arthuang / detail
  821. Fix for jenkins parallel make — galbramc / detail
  822. Updates to porous media PDEs: added gravity to 2D two-phase, added pressure output functional — savithru / detail
  823. Vera fixes — savithru / detail
  824. Fixed copyright notice — savithru / detail
  825. One more fix.. — savithru / detail
  826. Fix uninitialized value — savithru / detail
  827. Some cleanup in PTC — shunz / detail
  828. Fixed a bug in PTC daisy chain implementation: previously, past solution and time step field was not properly updated for daisy-chained equations — shunz / detail
  829. reapply quadorder fix. — cfrontin / detail
  830. Fix for singular matrix detection. Only guard against 1/0. — galbramc / detail
  831. Separating out LAPACK from LAPACKE — galbramc / detail
  832. Fixes for LAPACK interface — galbramc / detail
  833. Forgot to switch back a change — galbramc / detail
  834. Only test with LAPACKE on reynolds — galbramc / detail
  835. Don't show LAPACKE as an option on OSX — galbramc / detail
  836. Minor fix — galbramc / detail
  837. Include MKL in coverge testing — galbramc / detail
  838. Source intel for coverage — galbramc / detail
  839. Fixes for checking LAPACK — galbramc / detail
  840. Automatic checking of all lapack functions used by SANS — galbramc / detail
  841. Some small fixes — galbramc / detail
  842. Relax tolerance a bit more for intel — galbramc / detail
  843. Added maximum rate matrix output — galbramc / detail
  844. updated i/o on 4d cases. — cfrontin / detail
  845. New files for Adjoint consistent potential — galbramc / detail
  846. Cleanup trace matrix print — galbramc / detail
  847. Forgot a file — galbramc / detail
  848. working on RANS — arthuang / detail
  849. Fixes for latest refine — galbramc / detail
  850. agls formulation looks better? — arthuang / detail
  851. modified RANS tests — arthuang / detail
  852. pre merge — hcarson / detail
  853. typo denomerator to denominator — hcarson / detail
  854. caught an indexing bug with interior trace groups — hcarson / detail
  855. some tweaks as was retesting using elemental estimates. They still don't work (phew....) — hcarson / detail
  856. changed the Galerkin DoubleBL case to match up with the DG one — hcarson / detail
  857. changed checkGrid() to assert(assertGrid()). This is the same as checkGrid() in debug mode, but gets removed in release — hcarson / detail
  858. bug fixes and clean up — hcarson / detail
  859. undoing the assertGrid, it doesn't work how I thought it did — hcarson / detail
  860. updated io on 2D+T cases. — cfrontin / detail
  861. fixed solve4d i/o — cfrontin / detail
  862. fixes to make the avro grids work in the adapt — hcarson / detail
  863. fixed h approximation, *philip's tableflip emoticon*. — cfrontin / detail
  864. oops. — cfrontin / detail
  865. hooks for modifying order and power and command line — hcarson / detail
  866. fixed dumbass error. — cfrontin / detail
  867. Minor fixes per intel guide. Fix avro+wake. — galbramc / detail
  868. still working on RANS... — arthuang / detail
  869. Some fixes for BLAS and turn off one Wake test — galbramc / detail
  870. adding new parmafield builders — arthuang / detail
  871. Forgot file dump — galbramc / detail
  872. Updated EPIC interface — galbramc / detail
  873. distance function gradient working — arthuang / detail
  874. hack for sourcegradient compiles — arthuang / detail
  875. unitialized warnings from jenkins — hcarson / detail
  876. tweak for hypersonic — hcarson / detail
  877. found a bug in RANS source gradients — arthuang / detail
  878. this one not that one — arthuang / detail
  879. deprecated ElementDual local patch. Everyone can use Element now, and it should throw an exception if you run with ElementDual — hcarson / detail
  880. added the spaceType to the dummy problems — hcarson / detail
  881. sigh. forgot they need override — hcarson / detail
  882. maaaaaan — hcarson / detail
  883. sigh — hcarson / detail
  884. Fix for PETSc 3.11 — galbramc / detail
  885. moved the all_reduce inside the #define of Boundary Outputs. The FunctionalCell_Galerkin already includes an all_reduce — hcarson / detail
  886. Setup for Mike Park to test metric calculations — galbramc / detail
  887. commiting the new error model and the two double boundary layer cases to run on hypersonic — hcarson / detail
  888. Fix nightly clang warning — galbramc / detail
  889. typos and a small test for the DOF Map, didn't catch anything... — hcarson / detail
  890. playing with formulations, added source to BC — arthuang / detail
  891. getting closer — arthuang / detail
  892. SA wake test case — arthuang / detail
  893. minor edits to rans, unit tests — arthuang / detail
  894. i think the stabilization is sound... — arthuang / detail
  895. Added case to adaptND_mesh_optimizer_toy to easily generate unstructured uniform grids. — cfrontin / detail
  896. SolveND_DGBR2_AD_ST_toy for 3D and 4D now have grid loading capability, but it's ifdeffed out for now. — cfrontin / detail
  897. fixed #define — cfrontin / detail
  898. start from DG grids — arthuang / detail
  899. more tinkering with RANS — arthuang / detail
  900. nitsche param now includes source term — arthuang / detail
  901. Added 2D+T CG unstabilized advection diffusion mechanics. — cfrontin / detail
  902. added an integrand for estimating the square of the L2 error locally — hcarson / detail
  903. locked the TopoDim template to the Topology::TopoDim template. We should not be templating on both here, these should be removed — hcarson / detail
  904. added some integral tests — hcarson / detail
  905. A class for computing L2 error estimates, either nodally or elementally — hcarson / detail
  906. Reduced ErrorOrder_4D_DG_Pentatope_btest max grid size to reduce runtime — galbramc / detail
  907. Fixed uninitialized data with intel — galbramc / detail
  908. removed TopoDim from the for_each_XXX functions. Also added Topology::CellTopoDim, which gives the dimension of the topology for which Topology was a trace. — hcarson / detail
  909. Also made a GalerkinLib in the process of splitting out the local solve machinery for CG to use in the L2 proction solver — hcarson / detail
  910. fixing up unit tests to match new indicator calculation. Also changing mitState Nitsche to use the p independent lengthL. Will then need to choose constants properly some other way. — hcarson / detail
  911. A Nodal error estimate order test — hcarson / detail
  912. refactor into explicit instantiations and added GalerkinLib to a CMakeLists.txt I forgot — hcarson / detail
  913. more instantiations and fix a bug — hcarson / detail
  914. moving towards a CG L2 local projection. — hcarson / detail
  915. updating error estimate order tests. DG now uses the mitState BC, the CG one does not as it can't achieve the rates. There must be an instability in the adjoint.... — hcarson / detail
  916. Use CG local patch bcs for the local solve — hcarson / detail
  917. actually added the declaration to the header... — hcarson / detail
  918. Added a re-roll of the c++-14 make_unique feature — hcarson / detail
  919. Added a re-roll of the c++-14 make_unique feature — hcarson / detail
  920. first use of make_unique. — hcarson / detail
  921. ErrorEstimateL2 should now handle p0 or p1 estimation gracefully, and also actually handled that stupid merge conflict — hcarson / detail
  922. Fixed many clang analyzer complaints — galbramc / detail
  923. new MDG directory — arthuang / detail
  924. MDG integrand cell unit test passing — arthuang / detail
  925. changed name of test and added the notebook that generated the L2 error integrand tests — hcarson / detail
  926. forgot an mpi include — hcarson / detail
  927. all_reduce only works on POD not the KahanSum — hcarson / detail
  928. some tweaks — hcarson / detail
  929. interior trace w/ 1d unit test — arthuang / detail
  930. missed a bracket in the merge — arthuang / detail
  931. jacobian ping test added for cell,trace — arthuang / detail
  932. forgot to turn CG LG trace back on — hcarson / detail
  933. added CG sandbox for AD 2D+T problem. — cfrontin / detail
  934. Fixed more analyzer warningw — galbramc / detail
  935. fixed for push, incorporated hugh's mistakenly included preprocessor define. — cfrontin / detail
  936. more hugh fixes plus trueoutput fixes. — cfrontin / detail
  937. SolverInterfaceL2 project actually uses the correct local patch for CG now — hcarson / detail
  938. JEEEEENNNNKIONNNNSSSSS — cfrontin / detail
  939. added SA nitsche — arthuang / detail
  940. jacobian and residual unit tests passing — arthuang / detail
  941. Fixed typo — galbramc / detail
  942. jenkins punched me in the face *again*. — cfrontin / detail
  943. MDG solve works.. needs debugging — arthuang / detail
  944. grumble — cfrontin / detail
  945. VOLUME_WEIGHTED crept through on those last commits. It shouldn't have and this fixes that — hcarson / detail
  946. why oh why did i not save the fixes last time — cfrontin / detail
  947. preprocessor sandbox troubles. — cfrontin / detail
  948. dumb preprocessor stuff fix. — cfrontin / detail
  949. bad include habits fixed. — cfrontin / detail
  950. MDG solves! optimal rates! — arthuang / detail
  951. warning fix. — cfrontin / detail
  952. getting closer to everything compiling — arthuang / detail
  953. moved jacobian calculations into output integrands for Galerkin. bunch of stuff still not working — arthuang / detail
  954. getting closer to passing unit tests.. — arthuang / detail
  955. unit tests updated — arthuang / detail
  956. unit test/compile fixes — arthuang / detail
  957. indentation warning — arthuang / detail
  958. last final last warning bother. — cfrontin / detail
  959. tidying solve3d_CG_AD_ST_toy — cfrontin / detail
  960. MDG jacobianfunctional in place, solves are compiling — arthuang / detail
  961. MDG compiles fine but doesn't stabilize in advective limit. Hmm... — arthuang / detail
  962. MDG working well again.. we have to figure out the Nitsche BCs — arthuang / detail
  963. change cb back to 2 to pass Jenkins — arthuang / detail
  964. 2D error order compiling — arthuang / detail
  965. add function hooks to 3DST — arthuang / detail
  966. added function hooks for 1d, 2d spacetime — arthuang / detail
  967. fieldweighted cell integrand for MDG — arthuang / detail
  968. added fieldweighted for MDG trace integrand — arthuang / detail
  969. More clang analyzer warning fixes. — galbramc / detail
  970. more needed function hooks — arthuang / detail
  971. change to isothermal wall BCs, push to hypersonic — arthuang / detail
  972. ughhhhhh more ndconvert troubles — arthuang / detail
  973. add isothermal to RANs BCs — arthuang / detail
  974. removed unused typedef — arthuang / detail
  975. Nightly fixes — galbramc / detail
  976. fixed mdg unit tests — arthuang / detail
  977. Nightly fixes — galbramc / detail
  978. reordered MDG jac, added error estimate cell — arthuang / detail
  979. RANS cases working pretty well, pushing to hypersonic — arthuang / detail
  980. mdg error estimates in place — arthuang / detail
  981. took out adjointState functions (mostly) — arthuang / detail
  982. completed sourceJacobianHACK change. MDG adjoints not quite working... — arthuang / detail
  983. error estimate unit test passing, but sandbox case is off... — arthuang / detail
  984. mdg error estimates working! — arthuang / detail
  985. typo — arthuang / detail
  986. cleanup — arthuang / detail
  987. fixed hack interface — arthuang / detail
  988. added unit testing for 3D RANS fncs, other cleanup — arthuang / detail
  989. forgot a file — arthuang / detail
  990. sandbox edits — arthuang / detail
  991. complaining about includes? — arthuang / detail
  992. unused variables.. push to tucano for memcheck — arthuang / detail
  993. unit test name change — arthuang / detail
  994. missing definition — arthuang / detail
  995. trying to fix segfault — arthuang / detail
  996. fixed the warning, but there's a segfault somewhere in edgelocal3d... — arthuang / detail
  997. wow that was really dumb but took 4 hours to find — arthuang / detail
  998. putting Nitsche into stabilization object.. stil lin process — arthuang / detail
  999. premerge — arthuang / detail
  1000. most things compiling... — arthuang / detail
  1001. nitsche parameter change complete.. things seem to compile ok — arthuang / detail
  1002. member variables out of order — arthuang / detail
  1003. Added unit tests for gravity term in PDETwoPhase2D + some cleanup — savithru / detail
  1004. tweaks to get MDG working for systems — arthuang / detail
  1005. fixed checks for parallel — arthuang / detail
  1006. whoops switched back — arthuang / detail
  1007. hopefully more correct for parallel? — arthuang / detail
  1008. Nightly fixes — galbramc / detail
  1009. Another nightly fix — galbramc / detail
  1010. More nightly fixes — galbramc / detail
  1011. Another nightly fix — galbramc / detail
  1012. Hopefully last warning fix — galbramc / detail
  1013. minor edits that shouldn't affect anything — arthuang / detail
  1014. MDG with discontinuous efld.. does better! — arthuang / detail
  1015. working towards error estimate from fine scale — arthuang / detail
  1016. minor change to AGLS — arthuang / detail
  1017. missed a function update — arthuang / detail
  1018. push to hypersonic — arthuang / detail
  1019. push to hypersonic — arthuang / detail
  1020. few changes to MDG output — arthuang / detail
  1021. mdg rans sandbox compiling — arthuang / detail
  1022. extra args for output — arthuang / detail
  1023. print resid bug fix — arthuang / detail
  1024. MDG qp should initialize to zero — arthuang / detail

#234 (May 11, 2019, 1:52:08 AM)

  1. git jenkins not working...dummy commit — pcaplan / detail
  2. Added CG for L2Projection — galbramc / detail
  3. added boundary functional and mathematica notebook for computing exact solutions — hcarson / detail
  4. removing unworking test from repo — hcarson / detail
  5. changed default to 1.0 for Frob constraint — hcarson / detail
  6. added scale and offset to 1D BL — hcarson / detail
  7. Missing include — galbramc / detail
  8. change case — pcaplan / detail
  9. element ridge (TopoDim-2 elements) needed to construct 4d elems — pcaplan / detail
  10. xfielddomain holds ego children not SANS::EGObject, reason is because tesseract geometry entities are not technically ego's though avro does define a unique ego for each entity — pcaplan / detail
  11. instantiations for 4d target metric matching — pcaplan / detail
  12. CG field construction for TopoD4 meshes, tested on p=1 — pcaplan / detail
  13. target metric matching in 4d sandbox — pcaplan / detail
  14. Refactored projection to Qauxi_IBL by unifying implementations for DuplicateField and UniField IBL — shunz / detail
  15. element ridge unit test + equilateral pentatope jacobian — pcaplan / detail
  16. fixed bug with equilateral pentatope jacobian + matlab script + unit test on implied metric — pcaplan / detail
  17. added a boundary output for the triple BL, various clean ups, reverting to 0.25 for the default param — hcarson / detail
  18. Refactored UniField IBL variable interpreter.  More work needed to propagate to everywhere oc the code base. — shunz / detail
  19. Minor refactoring.  Updated pyrite file. — shunz / detail
  20. Refactoring.  Realizing that using ctau is fragile since log(ctau) is frequently needed to compute n_tilde but ctau can undershoot through below zero. — shunz / detail
  21. Refactored UniField variable/eqns to use nt as a conservative quantity — shunz / detail
  22. Restored panel method unit test — shunz / detail
  23. Tweaked iteration limit to wait until convergence — shunz / detail
  24. Refactored constructors of IBL PDE and fluid models.  Started PDEIBLUniField unit test.  Other minor refactoring — shunz / detail
  25. Added 2D+T AD case, in progress, with assorted necessary changes. Still needs BC fix. Also added framework for 4D single pentatope unit grid. Should hopefully also include all necessary unit testing, as mapped from similar 1D cases to cases of interest. — cfrontin / detail
  26. Fix typo — galbramc / detail
  27. field element pentatope tests — pcaplan / detail
  28. debugging costmodel_logeuclidean on topoD4 ping tests — pcaplan / detail
  29. brace alignment — pcaplan / detail
  30. uncomment xfieldspacetime_pentatope tests until actually implemented — pcaplan / detail
  31. unused defs — pcaplan / detail
  32. undefined references without avro — pcaplan / detail
  33. sign compare — pcaplan / detail
  34. missing file to compile — pcaplan / detail
  35. lingering comma — pcaplan / detail
  36. ridge -> frame — pcaplan / detail
  37. undef references — pcaplan / detail
  38. commit deleted files — pcaplan / detail
  39. wrap ifdef SANS_AVRO further ahead — pcaplan / detail
  40. omit spacetime pentatope btest from memcheck because it takes a long time, bump up timeout for it as well — pcaplan / detail
  41. instantiate matrixsyms4 projection for tets — pcaplan / detail
  42. basis function instantiate — pcaplan / detail
  43. matmul instantiation — pcaplan / detail
  44. reduced number of orientations to make elementspacetime_pentatope test go faster — pcaplan / detail
  45. Remove maybe uninitialized wanrings on gnu 8 — galbramc / detail
  46. last instantiation i promise — pcaplan / detail
  47. bug in cost model log-euclidean test because of the vertex/step matrix ordering — pcaplan / detail
  48. seriously this has to be the last one — pcaplan / detail
  49. last one! — pcaplan / detail
  50. trigger commit — pcaplan / detail
  51. up to p=2 for element space time test because it's really slow — pcaplan / detail
  52. Revamped Qauxv/parameters API. — shunz / detail
  53. Fixed typos — shunz / detail
  54. Propagated more changes in IBL parameter API.  Verified coupled IBL UniFIeld forced laminar case. — shunz / detail
  55. Fixed more tests related to IBL parameter API — shunz / detail
  56. Update test/system/AnalyticSolve/AnalyticSolve2D_DGAdvective_IBL_StagnationFlow_SingleElem_LamiBL_btest.cpp — shunz / detail
  57. Verified two system tests with PDEIBL2D using LF flux. — shunz / detail
  58. Fixed uncoupled IBL HDG case — shunz / detail
  59. 2D+T is running, working towards validation. — cfrontin / detail
  60. Added json parser to PyDict — galbramc / detail
  61. Fixed formatting from vera++. Also reformulated 2D+T case for convergence investigation. — cfrontin / detail
  62. switched from pure adv to AD for hypersonic. — cfrontin / detail
  63. 2D+T AD ST toy fix; need unit tests for BCAD2D.h — cfrontin / detail
  64. Fixed bugs in PDEIBLUniField — shunz / detail
  65. Lots of refactoring of AFLR4 and sansLIPAIM. All seems to be functioning. — galbramc / detail
  66. Minor fix — galbramc / detail
  67. Tweak to how AFLR is found — galbramc / detail
  68. Fixed compile error — galbramc / detail
  69. Update minimum boost version to 1.50 due to bug in property_tree json reader. — galbramc / detail
  70. Merged AFLR4 test into EGTessModel — galbramc / detail
  71. Fixed flux feedthrough for 2D+T AD. — cfrontin / detail
  72. More extensive try with sansLIPAIM — galbramc / detail
  73. Most sansLIP updates — galbramc / detail
  74. Fix MKL_PARDISO for transpose solves. Bug fix for AFLR3 — galbramc / detail
  75. Use static MKL libraries due to python issues — galbramc / detail
  76. Don't statically link in the ld library — galbramc / detail
  77. Increased timout time for HDG test — galbramc / detail
  78. Realzed timing on another test — galbramc / detail
  79. Refactored UniField IBL and ran it for forced and free transition problems — shunz / detail
  80. Played captured transition (forced and free) — shunz / detail
  81. Updated initial solution guesses for reformulated captured transition IBL — shunz / detail
  82. Unified system test on the case of uncoupled IBL laminar BL on airfoil — shunz / detail
  83. Refactored IBL numerical fluxes — shunz / detail
  84. Updated pyrite files for coupled coupled IBL cases with laminarBL+turbulentWake — shunz / detail
  85. Moved 2D+T convergence to Solve3D, made Adapt3D version adapt. — cfrontin / detail
  86. Typo fix. — cfrontin / detail
  87. Ran and added pyrite files for captured forced transition without using cut-cell machinery — shunz / detail
  88. push to hypersonic — pcaplan / detail
  89. Verified reasonable agreement between natural transition solution of UniField IBL using cut-cell against that using plain DG without cut-cell — shunz / detail
  90. Added recent-5 to Adapt3D 2D+T AD — cfrontin / detail
  91. Added MKL instantiation — shunz / detail
  92. Separate list of MKL static libraries — galbramc / detail
  93. Always link in MKL statically with sansLIPAIM — galbramc / detail
  94. Moved error message for sansLIP — galbramc / detail
  95. Building mpi all_reduce into FunctionalCell_Galerkin — galbramc / detail
  96. Added missing includes — galbramc / detail
  97. projection stabilization — arthuang / detail
  98. Minor edits — shunz / detail
  99. Changed default numerical flux — shunz / detail
  100. Added pyrite files for fitted transition of forced cases — shunz / detail
  101. Removed redundant cases — shunz / detail
  102. Minor updates — shunz / detail
  103. Added an alternative turbulent onset ctau value — shunz / detail
  104. Updates before running grid convergence on fitted transition — shunz / detail
  105. fixed a bug in PDEIBL source.  other minor fixes — shunz / detail
  106. Updated pyrtied files to fix the bug in PDEIBL lag source term introduced on 2018/11/02 in commit 9625612 — shunz / detail
  107. Tweaked a default setting for system test pyrite checks — shunz / detail
  108. Cleaned up system tests — shunz / detail
  109. Fixed free-forced nested solver logic for transition at element interface — shunz / detail
  110. Updated and cleaned up pyrite files — shunz / detail
  111. Updated an initial solution file for flow transition system tests — shunz / detail
  112. Renaming — shunz / detail
  113. minor updates — shunz / detail
  114. Added a to-do — shunz / detail
  115. added to-do — shunz / detail
  116. Refactored two system tests.  Added options to change transition model parameters on the fly — shunz / detail
  117. Fixed a bug/feature in an unimportant if statement — shunz / detail
  118. Cleanup — shunz / detail
  119. Cleaned up deprecated parts.  Fixed LF flux.  Refactored transition front source/flux.  Editted printout — shunz / detail
  120. Fixed uninitialized data in Flux_mitState_Nitsche for pure advective. — galbramc / detail
  121. Updated pyrite file after updating PDEIBL LFflux related stuff — shunz / detail
  122. Removed variable length arrays — galbramc / detail
  123. Replaced turbulent BL TS wave growth rate with the previous formulation of interpolating over turbulent sub-element, which makes cd vs ntcrit relation smooth.  Updated pyrite files for free transition — shunz / detail
  124. Minor refactoring — shunz / detail
  125. Fixed LFflux for IBLUniField.  Refactored test case and updated pyrite file — shunz / detail
  126. Missed a few variable length arrays — galbramc / detail
  127. One more warning — galbramc / detail
  128. Refactored PDEIBLUniField member field to allow for parameter ntcrit sweep.  Updated initial solution guess to be based on an existing IBL solution. — shunz / detail
  129. Fixed warnings — galbramc / detail
  130. Better cleanup of coverage information — galbramc / detail
  131. Don't build sandbox with nightly — galbramc / detail
  132. Clang analyzer should still build sandbox — galbramc / detail
  133. Revived gradation penalty. Needs lots of tweaks and studying — galbramc / detail
  134. Added unit test for 2D+T implementations. — cfrontin / detail
  135. Working on pentatope tests. — cfrontin / detail
  136. Changed scaling factor for objective — ursachi / detail
  137. Added 1D and 2D includes — ursachi / detail
  138. Updates for latest version of AFLR — galbramc / detail
  139. Gradation still needs more work... — galbramc / detail
  140. Fix compiler error — galbramc / detail
  141. Fixed arry bound typo in test — galbramc / detail
  142. more tests for orientations of tets in 4d — pcaplan / detail
  143. lingering changes — pcaplan / detail
  144. DG fields in 4d + unit tests — pcaplan / detail
  145. silly typo — pcaplan / detail
  146. can only use KF triangulation if avro is hooked in — pcaplan / detail
  147. Working on unit grids... — cfrontin / detail
  148. transferring — arthuang / detail
  149. Another formatting fix. — cfrontin / detail
  150. Another formatting fix. — cfrontin / detail
  151. minor editting — shunz / detail
  152. added modified diffusion matrix — arthuang / detail
  153. minor mod to proj stabilization — arthuang / detail
  154. Fix includes. — cfrontin / detail
  155. pre merge — hcarson / detail
  156. add proj stab matrices for 1DAD, stokes — arthuang / detail
  157. taking out some comments — arthuang / detail
  158. Taking the warning machete to things. — cfrontin / detail
  159. Refactored test case input — shunz / detail
  160. Udpates to sansLIPAIM to work with new CAPS dataTransfer setup — galbramc / detail
  161. system test for DG with pentatopes — pcaplan / detail
  162. Minor update — shunz / detail
  163. Added an option of wake ctau_eq but not used — shunz / detail
  164. moving to hyper branch — hcarson / detail
  165. MCMC flat plate for class — hcarson / detail
  166. forcing function for heating — hcarson / detail
  167. use SANS convention for trace orientation instead of the one used in avro — pcaplan / detail
  168. 1Ptope test working, fixed assumptions on nodal definitions. — cfrontin / detail
  169. fixed GLS? — arthuang / detail
  170. edit cmake list — arthuang / detail
  171. 2Tope unitgrid working, testcase working. — cfrontin / detail
  172. Turned off tesseract for push. — cfrontin / detail
  173. Light LIP tecplot files — galbramc / detail
  174. Smaller tecplot file for LIP — galbramc / detail
  175. Fix scoping issues. — cfrontin / detail
  176. Fixed warnings — galbramc / detail
  177. Added comment with origin of SVD3 algorithm — galbramc / detail
  178. handmade unit grid: 1 pentatope with 5 pentatope neighbours — pcaplan / detail
  179. allow all orientations of traces (1 to 12) in checkGrid — pcaplan / detail
  180. local grid extraction for pentatopes — pcaplan / detail
  181. cell to trace connectivity for pentatopes — pcaplan / detail
  182. finish implementation of element associativity of pentatopes — pcaplan / detail
  183. unit tests for local grid extraction around pentatopes (single pentatope and single pentatope surrounded by neighbours) — pcaplan / detail
  184. other minor changes — pcaplan / detail
  185. gradprojection working — arthuang / detail
  186. verified optimal order for 1DAD grad projection — arthuang / detail
  187. comm rank = 0 using xfield_lagrange — pcaplan / detail
  188. 24Ptope working, passing checkGrids(). test in progress. — cfrontin / detail
  189. remove duplicate unit grids in favour of handmade ones — pcaplan / detail
  190. warning fix — pcaplan / detail
  191. warning fix — pcaplan / detail
  192. 24Ptope unit grid working, tested and working. — cfrontin / detail
  193. commit so it ought to run for ben? — hcarson / detail
  194. Add duration to each build in Jenkins email. — galbramc / detail
  195. tweaks and the forcing — hcarson / detail
  196. full rank diffusive stabilizaiton — arthuang / detail
  197. actually making it not work — hcarson / detail
  198. changed the try catch for implied metric optimization to doing nothing rather than excepting. Also tweaks to MCMC file — hcarson / detail
  199. tweaks and removed a bunch of heap memory allocations — hcarson / detail
  200. added options to the quadratic — hcarson / detail
  201. more mods to projection stabilization — arthuang / detail
  202. undoing a lot of sketchy things — arthuang / detail
  203. rolling back more sketchy stuff — arthuang / detail
  204. mods for running with avro — hcarson / detail
  205. comment typos — hcarson / detail
  206. switching over to avro — hcarson / detail
  207. everything compiles, gotta track down unit tests — arthuang / detail
  208. getting unit tests to pass — arthuang / detail
  209. Reworked build of parmetis. refine uses parmetis. added avro build. — galbramc / detail
  210. minor edits to edge local unit tests — arthuang / detail
  211. Fixes for avro and refine — galbramc / detail
  212. Suppress warning — galbramc / detail
  213. Parallel Field4D test fixes. Give refine more time. — galbramc / detail
  214. Relaxed tolerance for intel — galbramc / detail
  215. Don't run ErrorOrder_4D in parallel — galbramc / detail
  216. Updated refine build — galbramc / detail
  217. Updated refine check — galbramc / detail
  218. Nightly build fixes... plus a stopgap ifdef until the SVDless 4D normal vector is done. — cfrontin / detail
  219. Reduce run time of 4D error order check — galbramc / detail
  220. Relaxed another tolerance — galbramc / detail
  221. trying out some edge stabilization — arthuang / detail
  222. MCMC things and got the temp sensors working — hcarson / detail
  223. Remove files written by avro — galbramc / detail
  224. Dissable refine testing for now — galbramc / detail
  225. Added memcheck to parmetis build — galbramc / detail
  226. Ignore external parmetis — galbramc / detail
  227. added hessian to interior trace — arthuang / detail
  228. edge stabilization working-ish? — arthuang / detail
  229. changing branch — hcarson / detail
  230. MC for running on hypersonic — hcarson / detail
  231. ready for running on hypersonic — hcarson / detail
  232. Generalized valgrind suppression — galbramc / detail
  233. moving to hypersonic again — hcarson / detail
  234. egads coords must have 3 dimensions even in 2d — pcaplan / detail
  235. the final files from the project — hcarson / detail
  236. forgot a function — hcarson / detail
  237. pushing to tucano — arthuang / detail
  238. Suppressed CMakeLists errors. [TBD] — shunz / detail
  239. Fixed panel metod tests — shunz / detail
  240. AFLR4 updates and some Jenkins scripts — galbramc / detail
  241. Link tetgen before avro — galbramc / detail
  242. instantation of elementlocal version of local splits for 4d...unit test will fail because the result is different than savi's convention — pcaplan / detail
  243. missing definitions for elementlocal & edgelocal — pcaplan / detail
  244. some instantiations of savi's method for doing local splits — pcaplan / detail
  245. xfield_lagrange method of doing local splits...still debugging...will fix later... — pcaplan / detail
  246. Refactoring.  Patched unit tests — shunz / detail
  247. More unit tests — shunz / detail
  248. added unit tests — shunz / detail
  249. Fixed unit tests — shunz / detail
  250. Fixed IBL unit tests — shunz / detail
  251. Added unit test.  Turned off unused methods. — shunz / detail
  252. Fixed a bug in CMakeLists: use of out-of-scope variable — shunz / detail
  253. Fixed a bug in cmake files that only appear when building with Xcode — shunz / detail
  254. Refactored ping test input array type.  Fixed IBL-related 4x4 block system ping tests.  Added missing MPI-related method definitions for pure virtural methods — shunz / detail
  255. Relocated code into SANS_MPI macros; otherwise, errors are raised about "member access to incomplete type" — shunz / detail
  256. Verified/fixed/cleaned IBL system tests with transition (full upwind). — shunz / detail
  257. Fixed duplicate naming of boost test suite — shunz / detail
  258. Relaxed pyrite tolerance — shunz / detail
  259. Updated forced-transition pyrite files after the bug fix in commit b30121ee5531d91e84aac94fbdab6462f458f4f8 — shunz / detail
  260. Turned off file dump — shunz / detail
  261. Fixed formatting — shunz / detail
  262. Fixed empty traling line — shunz / detail
  263. Fixed DG and HDG AES tests for uncoupled IBL — shunz / detail
  264. Fixed formatting — shunz / detail
  265. Reverted changes to (viscous) HDG stuff: those abandoned changes treated qfld and afld as a single bundle field — shunz / detail
  266. Update AlgebraicEquationSet_HDGAdvective_Advection_btest.cpp — shunz / detail
  267. Fixed one more test affected by ping test refactoring.  Fixed formatting and screen output — shunz / detail
  268. Fixed another system test affected by IBL Qauxv interpreter refactoring — shunz / detail
  269. Update ErrorOrder_1D_HDGAdvective_Advection_btest.cpp — shunz / detail
  270. Fixed warning and missing instantiation — shunz / detail
  271. Added an instantiation just for completeness, although it is no longer used — shunz / detail
  272. moving towards adjoint GLS — arthuang / detail
  273. Cleaned sandbox cases — shunz / detail
  274. relaxed tolerances for clang_release — shunz / detail
  275. Suppressed output — shunz / detail
  276. Fixed bugs in CMakeLists — shunz / detail
  277. Fixed HDG advection tests — shunz / detail
  278. Removed the pure advection test case using (viscous) HDG machinery — shunz / detail
  279. parallel outputs in galerkin solver interface, AGLS error estimation fixed? — arthuang / detail
  280. Refactored halving line search and fixed unit tests — shunz / detail
  281. Fixed memory errors — shunz / detail
  282. Relaxed tolerance for intel — shunz / detail
  283. relaxed tolerances for intel18 — shunz / detail
  284. Relaxed timeout limits — shunz / detail
  285. Speed up unit tests in response to Jenkins timeout — shunz / detail
  286. Fixed typo — shunz / detail
  287. Relaxed tolerance for gnu48 — shunz / detail
  288. Tried to fix timeout on Jenkins testing (coverage_clang reynolds) — shunz / detail
  289. Reverted CMakeLists to see if TIMEOUT is set properly this time on Jenkins — shunz / detail
  290. minor refactoring — shunz / detail
  291. Refactored CMakeLists for Xcode build — shunz / detail
  292. Refactored Newton solver — shunz / detail
  293. Minor fix — shunz / detail
  294. Fixed warnings — shunz / detail
  295. Added IBL max update fraction — shunz / detail
  296. Enabled under-relaxed Newton update for coupled 4x4 block system of IBL with free transition. — shunz / detail
  297. Refactor of avro XField interface — galbramc / detail
  298. Consistent logic for setting cmake testing timout property — galbramc / detail
  299. Fixed refine interface change — galbramc / detail
  300. Fix ifdef when not using avro — galbramc / detail
  301. More fixes to deal with avro — galbramc / detail
  302. Minor cleanup — galbramc / detail
  303. Added unit tests for IBL updateFraction — shunz / detail
  304. Upgrade PETSc — galbramc / detail
  305. More avro and PETSc tweaks — galbramc / detail
  306. I don't understand why dl library is needed to link a static library... — galbramc / detail
  307. Fix for refine check — galbramc / detail
  308. Suppress compiler warning when building PETSc — galbramc / detail
  309. Fix for avro with 4D — galbramc / detail
  310. Enable refine testing again — galbramc / detail
  311. Updated copyright date to 2019 — galbramc / detail
  312. Updated copyright date to 2019 — galbramc / detail
  313. dimension-independent local splits — pcaplan / detail
  314. timing tests show dim-independent implementation on par with savithru's impl...tried to debug hugh's local xfield in primal mode but something is wrong...unit tests on the way — pcaplan / detail
  315. adding stabilized error estimation infrastructure — arthuang / detail
  316. more playing with AGLS — arthuang / detail
  317. minor edits — arthuang / detail
  318. reconciling merge conflicts and some tweaks — hcarson / detail
  319. license updates — hcarson / detail
  320. fixes to match avro — hcarson / detail
  321. forgot to add the avro defined precompile check — hcarson / detail
  322. relaxed tolerances and forgot to split world — hcarson / detail
  323. tweaking tol again... — hcarson / detail
  324. another tweak... — hcarson / detail
  325. cleanup of localpatch + commenting — pcaplan / detail
  326. copyright — pcaplan / detail
  327. more copyright — pcaplan / detail
  328. Updates for MOESS optimizations. Still needs more work. — galbramc / detail
  329. Instantiations for 4D AD solve. — galbramc / detail
  330. A few fixes — galbramc / detail
  331. Compile fixes — galbramc / detail
  332. More instantiations for 4D — galbramc / detail
  333. removed anachronistic definition of primal grid. Primal grid now matches the behavior of the normal DG grids. Unit tests have just been turned off in the meantime — hcarson / detail
  334. make sure mpi is init'd before calling rank by actually running in parallel — pcaplan / detail
  335. revert back to dual — pcaplan / detail
  336. ifdef SANS_AVRO for tests with CKF triangulation — pcaplan / detail
  337. changed to Dual in the system test — hcarson / detail
  338. attempted to fix nightly tests — shunz / detail
  339. Relaxed timings, fixed warning — galbramc / detail
  340. Updated pyrite files to fix nightly tests — shunz / detail
  341. Moved timing test into sandbox — galbramc / detail
  342. Cleanup of refine interface with auto memory management. — galbramc / detail
  343. Modest progress on instantiations. — cfrontin / detail
  344. Fix include — galbramc / detail
  345. 4D box unit grid grandfathered out of XField_KuhnFreudenthal. — cfrontin / detail
  346. added fix to 3D — hcarson / detail
  347. removed the separate 4D file, just added an instantiate at the end of 3D — hcarson / detail
  348. p=7 led to error close to machine zero, which seemed to cause touble to nightly ErrorOrder test.  Cut back p from 7 to 6 — shunz / detail
  349. p=6 still too high for pyrite test for ErrorOrder — shunz / detail
  350. Attempted to warning "use of zero-allocated memory" — shunz / detail
  351. Some cleanup in the sandbox. Added 2D L2Project adaptation — galbramc / detail
  352. Added tecplot dump for metric fields. Other small fixes — galbramc / detail
  353. Changed floor to round for generating new 1D mesh — ursachi / detail
  354. Minor refactoring — shunz / detail
  355. Compile fixes and more dependency warning suppressions — galbramc / detail
  356. Add dl library for avro — galbramc / detail
  357. Replaced nt transport equation with G variable as in SciTech paper, although the results are equivalent — shunz / detail
  358. bits and pieces — hcarson / detail
  359. added linear args and a test — hcarson / detail
  360. just wanna get my stuff in the repo — pcaplan / detail
  361. Files for parallel periodic XField2D_Box_Triangle_Lagrange (Issues need to be fixed) — kug46 / detail
  362. retrieve edge indices and sub elems from split — pcaplan / detail
  363. ref coordinates on split sub cells — pcaplan / detail
  364. Added a layer of abstractions when evaluating fluxes, sources etc. in IBL pde class — shunz / detail
  365. Fixed formatting... previously went under the radar since vera++ was not installed locally... — shunz / detail
  366. inst of some 4d adaptation things — pcaplan / detail
  367. Added scalar and dot product fixes for MatrixSymS — galbramc / detail
  368. Working on 3d ST... — cfrontin / detail
  369. Enabled smooth laminar/turbulent blending — shunz / detail
  370. Fixed SVD calculation for normal vector for 4D tet. — cfrontin / detail
  371. Scrubbed some comments. — cfrontin / detail
  372. edits to gls error estimation — arthuang / detail
  373. unit tests for basis function ref elem split — pcaplan / detail
  374. 4d adapt? — pcaplan / detail
  375. Fixed intel errors by relaxing tolerance and reconciling a missing pyrite file specialized for intel MKL — shunz / detail
  376. added a Field weighted stabilized CG nodal estimate integrand test in 2D — hcarson / detail
  377. comment — hcarson / detail
  378. Continued work on ElementXField implementations. — cfrontin / detail
  379. Vera fixes, COPYRIGHT fixes, and some avro preprocessor fixes. — cfrontin / detail
  380. Updates for 2D L2 Projection sandbox test — galbramc / detail
  381. Updates for 1D L2 Projection sandbox test — galbramc / detail
  382. Clearing out high-level exceptions whose low-level implementations are done. — cfrontin / detail
  383. Added last bits of ADST4D case, should run (?) now. — cfrontin / detail
  384. Added new trace free step matrix error model. Not enabled. — galbramc / detail
  385. added a 2D error estimate test, and asserted assumption on basis function type — hcarson / detail
  386. Fix. — cfrontin / detail
  387. fixed the estimate vary tests — hcarson / detail
  388. notebook with Double BL exact solutions — hcarson / detail
  389. forgot the copyright change — hcarson / detail
  390. Normalize MOESS optimization with nlopt — galbramc / detail
  391. Fixed undefined reference — galbramc / detail
  392. Fixed a bug in laminar/turbulent blending function — shunz / detail
  393. ifdef SANS_AVRO requirements in unit tests. — cfrontin / detail
  394. removed the scp to devastator. Should be useful for everyone now — hcarson / detail
  395. forgot to change a quadratic function explicit constructor — hcarson / detail
  396. undoing a print — hcarson / detail
  397. EQUILATERAL PENTATOPE coordinates + added unit volume check in unit test to catch this — pcaplan / detail
  398. unit test for split ref step matrix on pentatopes + generating matlab script — pcaplan / detail
  399. unit tests for error model — pcaplan / detail
  400. 4D L2 ERROR ADAPTATION WORKS...cleaning up........ — pcaplan / detail
  401. Added new MOESS optimization without global FrobNorm — galbramc / detail
  402. Forgot CMake file — galbramc / detail
  403. CG artificial viscosity in 2D — blsc / detail
  404. Small fix for cmake summary — galbramc / detail
  405. Weekly test fixes — galbramc / detail
  406. Modified AlgEqSet, IntegrandInteriorTrace and 2D DGAdvective toy for Parallel 2D Periodic Grids — kug46 / detail
  407. Towards parallel PETSc/TAO — galbramc / detail
  408. Refactored intermittency calculation — shunz / detail
  409. Generailized Projection to Qauxi to handle blended intermittency. — shunz / detail
  410. Trying to bump coverage. — cfrontin / detail
  411. Some cleanup of logEuclidian cost — galbramc / detail
  412. Added lagrange P1 to the exception — hcarson / detail
  413. copywrite update for some files — arthuang / detail
  414. Various small fixes — galbramc / detail
  415. added a Tanh2 function based on Loseille's Tanh3 — hcarson / detail
  416. Updated Embedding unit test for quadrature integration — galbramc / detail
  417. Reverted to binary intermittency as default — shunz / detail
  418. Relaxed tolerance for intel compiler.  Restored default to binary intermittency for existing tests — shunz / detail
  419. Trying to get coverage... — cfrontin / detail
  420. Tests added + un-tested, unused additions removed. — cfrontin / detail
  421. Added comments and made sure ADST4D case is ready for parallelization. — cfrontin / detail
  422. More parallel fixes. — cfrontin / detail
  423. Relaxed torleranc for gnu48 — shunz / detail
  424. More parallel fixes. — cfrontin / detail
  425. Added regularized point source to accommodate potential co-existence of free and forced transition in the captured transition treatment — shunz / detail
  426. Updated ADST3D cases (solve and adapt) for avro and MPI use. — cfrontin / detail
  427. Forgot an MPI redefine. — cfrontin / detail
  428. jk MPI fix actually this time. — cfrontin / detail
  429. Minor fix — galbramc / detail
  430. Continued avro- and MPI-ification. — cfrontin / detail
  431. Unit testing fixes. — cfrontin / detail
  432. Fixed warning. — cfrontin / detail
  433. Fixed fstream initializer. — cfrontin / detail
  434. Warning cleanup... — cfrontin / detail
  435. Fixes towards parallel+periodic — galbramc / detail
  436. Coverage improvement... — cfrontin / detail
  437. cleanup of interface to match savithru's — pcaplan / detail
  438. instantiation of 4d savithru splits (technically the extraction works because that's what i started with but the actual split does not) — pcaplan / detail
  439. Fixes for running parallel DG with periodic BCs — galbramc / detail
  440. Removed adapt4d skeleton from build. — cfrontin / detail
  441. Added instantiation — galbramc / detail
  442. ffs — cfrontin / detail
  443. instantiate SVD (with error), XField_Local calls XField_LocalPatch in 4d which local_split_patch is turned off — pcaplan / detail
  444. ifdef sans avro in sandbox file — pcaplan / detail
  445. instantiation of new MOESS SANS optimizer for 4d — pcaplan / detail
  446. experimenting w p1 adjoint — arthuang / detail
  447. adapt3d change in api — pcaplan / detail
  448. relaxed tolerance for system test — pcaplan / detail
  449. publicize error model functions...still not sure why — pcaplan / detail
  450. added note about protected methods for error model class — pcaplan / detail
  451. missing operator for 1d function — pcaplan / detail
  452. unprotected from SANS_AVRO avro namespace use — pcaplan / detail
  453. rename file to avoid copyright check — pcaplan / detail
  454. deleted file — pcaplan / detail
  455. Only have vera look at .cpp and .h files — galbramc / detail
  456. SANS_CHECK_CLOSE not BOOST_CHECK_EQUAL for floats, come on philip — pcaplan / detail
  457. bug != in shock capturing — arthuang / detail
  458. revert back to formulation — arthuang / detail
  459. add expt stab (no-op) to 2DAD — arthuang / detail
  460. Added a C2 continuous smooth abs — hcarson / detail
  461. fix intel compiler warning — pcaplan / detail
  462. add pending changes in local patch header — pcaplan / detail
  463. Run SANS_Commit in parallel — galbramc / detail
  464. Cannot specify format for 'time' on all systems — galbramc / detail
  465. Updates to SANS_Commit.sh — galbramc / detail
  466. One more parallel fix — galbramc / detail
  467. Forgot to run 'make all' — galbramc / detail
  468. Fix make warning for now — galbramc / detail
  469. dev exceptioned code required only for 4d tecplot. — cfrontin / detail
  470. added a C2 smoothabs and matlab file that generated — hcarson / detail
  471. actually got the smoothmax1, smoothmax2 functions work, also added implicitly defined smoothmin1 and smoothmin2 — hcarson / detail
  472. merge fix — cfrontin / detail
  473. merge fix 2 — cfrontin / detail
  474. working on new error models — hcarson / detail
  475. ASExpCombo function for testing L2 — hcarson / detail
  476. Revive Adapt L2Project — galbramc / detail
  477. partial cleanup of local patch before supporting CG patches — pcaplan / detail
  478. Removed PBAM — galbramc / detail
  479. fix for jenkins, smoothmax2, tweaks to SANS opt and the VectorX hack to work with Phil — hcarson / detail
  480. unparallelized a test, there's a bug in P4 Hierarchical parallel — hcarson / detail
  481. turning the P3 and P4 unsplit tests off again. There's something weird and MPI-ish going wrong here — hcarson / detail
  482. Missed one include — galbramc / detail
  483. Missed one more file — galbramc / detail
  484. more cleanup of local patch — pcaplan / detail
  485. Suppress valgrind avro+intel strange warnings — galbramc / detail
  486. Broke up DGBR2lib trying to reduce compile time — galbramc / detail
  487. pre merge — hcarson / detail
  488. support for CG local solves with XField_LocalPatch — pcaplan / detail
  489. forgot to propagate changes in function names to tests — pcaplan / detail
  490. turnon off local patch splits for jenkins — pcaplan / detail
  491. silence warning — pcaplan / detail
  492. Switched implied metric optmizer to MMA — galbramc / detail
  493. agls tweaks — arthuang / detail
  494. Relaxed tolerance — galbramc / detail
  495. complete unit tests for xfield local patch...still need some work on CG tests — pcaplan / detail
  496. merge conflict — hcarson / detail
  497. a stupid bug — hcarson / detail
  498. changes to optimizers, and also turning the modified model back off — hcarson / detail
  499. Fix work weekly — galbramc / detail
  500. Weekly suppression and revived cotire — galbramc / detail
  501. Fixed the last error. — galbramc / detail
  502. Fixed a warning — galbramc / detail
  503. Added option to use CG field for PTC time step — galbramc / detail
  504. Changed the span of the SANS frob norm penalty function — galbramc / detail
  505. unit tests for DG/CG patches — pcaplan / detail
  506. remove print_inline — pcaplan / detail
  507. Conical method of stroud added, and working. Still needs integration into pentatope. — cfrontin / detail
  508. Added a ego map to EGTessModel that maps from All egos to Unique egos — galbramc / detail
  509. add xfield for full potential code using avro — pcaplan / detail
  510. Integrated Stroud into 4D quadrature. — cfrontin / detail
  511. cleanup avro wake3d — pcaplan / detail
  512. Fixed compile error — galbramc / detail
  513. Fixed another compile error — galbramc / detail
  514. work towards high-order support for local patch split — pcaplan / detail
  515. getting unit tests to pass... — arthuang / detail
  516. fixing merge conflicts — arthuang / detail
  517. Fix up PseudoTime_btest — galbramc / detail
  518. Fixed btest memory leak. — cfrontin / detail
  519. Improved stroud testing. — cfrontin / detail
  520. experimenting with an element based local solve — arthuang / detail
  521. BCNone is dead. Long live BCNone. — hcarson / detail
  522. New Implied Metric optimizer based on logM. Various other small fixes. — galbramc / detail
  523. elemID must be global — pcaplan / detail
  524. support for high-order local patch — pcaplan / detail
  525. ifdef avro — pcaplan / detail
  526. Updates for CG 3D Euler with shock capturing and 2D RANS — blsc / detail
  527. multiple def from copy paste — pcaplan / detail
  528. uninitializaed data fix (typo) — cfrontin / detail
  529. changes to error model interface for high-order local splits — pcaplan / detail
  530. Removing problematic instantiations due to wall distance parameter with artificial viscosity for RANS — blsc / detail
  531. add info as to which type of field is being sampled — pcaplan / detail
  532. Removing code from BCEuler3D_mitState.h which was ifdef'd out — blsc / detail
  533. added integer template for equation number — hcarson / detail
  534. typo in avro wake — pcaplan / detail
  535. specialized wake model not defined without avro — pcaplan / detail
  536. added an ND test of the BCNone with and without useFluxViscous — hcarson / detail
  537. Galerkin folder passes — hcarson / detail
  538. added the downcast to NoneBC to extract the boolean — hcarson / detail
  539. converted HDG over to the new Nones — hcarson / detail
  540. Updated implied metric for TAO. Fixed a number of floating point problems. — galbramc / detail
  541. More robust testing, compiler warning silencing. — cfrontin / detail
  542. dont inherit from xfield_avro if not defined — pcaplan / detail
  543. still missing some ifdef — pcaplan / detail
  544. Various compile fixes. Generalized Adapt2D_Mesh_Optimize for all mesh generators. — galbramc / detail
  545. Missed one — galbramc / detail
  546. Warning fixes — galbramc / detail
  547. killed a few more BCTypeNone references, just plugging away — hcarson / detail
  548. pre merge — hcarson / detail
  549. Removed the BCNoneUniField — hcarson / detail
  550. Added switching for expensive PI quadrature/low-cost NI quadrature. Fixed associated tests to get correct convergence rates. — cfrontin / detail
  551. committing sandbox pre-merge — arthuang / detail
  552. someone forgot to actually use the W and B typedefs — hcarson / detail
  553. missing include — hcarson / detail
  554. fixed the CMakeLists.txt — hcarson / detail
  555. made BCNone_AV to do with annoying ArtVisc feature — hcarson / detail
  556. missing includes and last bit — hcarson / detail
  557. fixed typo: derived to dervied — hcarson / detail
  558. vera slap correction — hcarson / detail
  559. Fixed one more BCNone — galbramc / detail
  560. forgot a file — hcarson / detail
  561. Removing more of the block artificial viscosity stuff in 2D and unit test updates — blsc / detail
  562. More merge conflicts — blsc / detail
  563. More merge conflict resolution — blsc / detail
  564. Fixed memory leak. — cfrontin / detail
  565. used quadrature cache for L2 projection — pcaplan / detail
  566. fix for order = 0 integration — pcaplan / detail
  567. New cost target for SANS MOESS optimizer. Lots of work towards avro+Wakes. — galbramc / detail
  568. Fixed typo — galbramc / detail
  569. Minor fixes — galbramc / detail
  570. One more typo — galbramc / detail
  571. Unit test updates — blsc / detail
  572. Helps to use consistent array size — galbramc / detail
  573. Updates to jenkins scripts — galbramc / detail
  574. Segregating MeshAdapter — galbramc / detail
  575. Missing instantiation — blsc / detail
  576. Fixed mistake in BuildAVRO — galbramc / detail
  577. Fixes for 3D CG case with artificial viscosity — blsc / detail
  578. Fixed compile issues related to separating dimensions — galbramc / detail
  579. Initializing variables to fix some compiler warnings — blsc / detail
  580. LU factorization on processors so PETSc solves reliably — blsc / detail
  581. Missed a few — galbramc / detail
  582. IRS updates — blsc / detail
  583. Fix for gnu 4.8 — galbramc / detail
  584. Refactored tecplot output to reduce link time — galbramc / detail
  585. Forgot files — galbramc / detail
  586. Fixed muliple instantiations — galbramc / detail
  587. pre merge — pcaplan / detail
  588. Syncing with hypersonic — blsc / detail
  589. reverting a dead end — arthuang / detail
  590. Adapt4D de-mothballing. — cfrontin / detail
  591. Fixed 'potential' memory leak problem by putting frees in same scope as creation. — cfrontin / detail
  592. Suppress cppcheck bug — galbramc / detail
  593. tweaked AGLS setup, hope this one gets through!! — arthuang / detail
  594. AGLS formulation w/ correction getting good rates! push to laptop, need to fix unit tests — arthuang / detail
  595. unit tests should be working... — arthuang / detail
  596. pre merge — hcarson / detail
  597. Another cppcheck suppression — galbramc / detail
  598. clean up on choosing reSolve groups — hcarson / detail
  599. some clean up — hcarson / detail
  600. added a virtual method for computing Initial Error. The default version has the overhead of a solve associated, whereas the SolverInterface version has the cheaper version that avoids the solve and thus is more robust — hcarson / detail
  601. parameter for avro to allow for interior boundaries needed for wake models — pcaplan / detail
  602. unit tests ready to go — arthuang / detail
  603. Adding 4D Legendre basis for Adapt4D + error estimates. — cfrontin / detail
  604. cmake addition of 4d legendre... still not finished though. — cfrontin / detail
  605. oops — cfrontin / detail
  606. don't use Philip's split for now — arthuang / detail
  607. add nb for output correction — arthuang / detail
  608. got rid of a unnecessary sandbox, updated other test — arthuang / detail
  609. One less call to checkGrid for curved LocalPatch — galbramc / detail
  610. More IRS stuff — blsc / detail
  611. moved metric conformity to separate file — pcaplan / detail
  612. tried to assess metric conformity and re-adjust target cost but simpler to just ask the mesher and have inner loop on adaptations to control target cost — pcaplan / detail
  613. pushing to hypersonic — arthuang / detail
  614. some fixes to actually use the volume factor... — pcaplan / detail
  615. new elemental error estimate for CG, not especially tested but seems to be ok — hcarson / detail
  616. more tweaks to cases — hcarson / detail
  617. Add static caching for pentatope quadrature. — cfrontin / detail
  618. Set edge length bound = 1 for 1D — ursachi / detail
  619. Added exponential and maxcubic functions — ursachi / detail
  620. 1D test cases — ursachi / detail
  621. std::stringstream has a surprisingly expensive constructor — galbramc / detail
  622. Fixed formatting — galbramc / detail
  623. Added missing copyright — galbramc / detail
  624. Added missing includes — galbramc / detail
  625. include set — pcaplan / detail
  626. merge — pcaplan / detail
  627. still default to savithru's local split — pcaplan / detail
  628. protect quadrature tests with use_conical — pcaplan / detail
  629. Deleted unnecessary includes — ursachi / detail
  630. changes to make avro grids compile again — hcarson / detail
  631. cleanup and forgotten files — hcarson / detail
  632. Progress towards avro+Wakes. Added intel19 to jenkins env. — galbramc / detail
  633. Quadrature fix. — cfrontin / detail
  634. Added Legendre4D Bases. — cfrontin / detail
  635. Adapt4D ADST should *start*. — cfrontin / detail
  636. Remove files dumped by avro — galbramc / detail
  637. Fixed missing parameter checks — galbramc / detail
  638. Improved speed of XField_LocalPatch — galbramc / detail
  639. Allow longer time for slow test — galbramc / detail
  640. debug CG local patch — pcaplan / detail
  641. Update UniqueTrace to use UniqueElem — galbramc / detail
  642. Added 4D pentatope Legendre unit tests. — cfrontin / detail
  643. Complete Legendre 4D test. — cfrontin / detail
  644. Actually this time. — cfrontin / detail
  645. Universalized legendre max order, refactored variable. — cfrontin / detail
  646. first errormodel additions. — cfrontin / detail
  647. Updating the delta wing case — galbramc / detail
  648. Fixed compile errors — galbramc / detail
  649. reference element tested and ready to fly. — cfrontin / detail
  650. More compile fixes for DeltaWing. avro works again with it. — galbramc / detail
  651. Skip blank backtrace numberes. Lots of work towards avro+Wakes — galbramc / detail
  652. Fixed test for lagrange basis function spacetime, moving coords to inherited class from base class. — cfrontin / detail
  653. warning fix, you dumbass\! — cfrontin / detail
  654. Fixed up hashing and added unit tests for UniquElem — galbramc / detail
  655. fixed cross-machine tolerancing issue. — cfrontin / detail
  656. Lots of fixes for avro+Wakes — galbramc / detail
  657. Don't dump file — galbramc / detail
  658. pre merge — hcarson / detail
  659. Reduce testing in MOESS_Gradation_Optimizer_NLOPT_btest — galbramc / detail
  660. new and improved AGLS formulation — arthuang / detail
  661. premerge — pcaplan / detail
  662. Use operator() to modify avro topologyDup — galbramc / detail
  663. Add backtrace info to singular matrix. Enable VERA_ERROR for all builds with SANS_Commit.sh — galbramc / detail
  664. Quadrature fixes — galbramc / detail
  665. Removed unnecessary line — galbramc / detail
  666. Add vera to CentOS and Rhel. Undo some fixes. — galbramc / detail
  667. Added boost to LD_LIBRARY_PATH on CentOS — galbramc / detail
  668. Guard against negative nodal metrics from ImpliedMetic optimizer — galbramc / detail
  669. Updated avro and refine build to work with .tgz files — galbramc / detail
  670. Updated build of lapack and avro build to use SANS lapack — galbramc / detail
  671. Forgot to remove test hack — galbramc / detail
  672. Fixed mistake in FindLAPACK — galbramc / detail
  673. Add more diagnostics to Jacobian failure with RefCoordSolver — galbramc / detail
  674. More debug info for singular RefCoordSolve — galbramc / detail
  675. Missing include — galbramc / detail
  676. GRRRRRRRRRRRRRRRR CELL GROUP 1 NEEDS  TO BE ADDED TO RESOLVE CELL GROUPS FOR CG GRRRRRRRRRR (╯°□°)╯︵ ┻━┻ — pcaplan / detail
  677. got rid of hackery — pcaplan / detail
  678. extra space — pcaplan / detail
  679. Working towards scale invariant DenseLinAlg solves — galbramc / detail
  680. line unit test should really allow edge split since its the same as an iso split, vera fixes too — pcaplan / detail
  681. cleanup of unused debugging stuff...what a colossal waste of time — pcaplan / detail
  682. trailing whitespace — pcaplan / detail
  683. Update vera to remove scripts when warn/error is changed. Add limits inlcude where numeric_limits is used. — galbramc / detail
  684. reverting to new AGLS formulation — arthuang / detail
  685. reverting to not use Philip's split to get thru Jenkins — arthuang / detail
  686. silence warning — pcaplan / detail
  687. Updates to CMake files — savithru / detail
  688. Fix quadrature memory leak again — galbramc / detail
  689. trying to solve pivot problem... not yet though. — cfrontin / detail
  690. added assert grid. Wraps check grid in a try-catch and return true if it passes. Can use in places where checkGrid can be removed in Release mode — hcarson / detail
  691. pre merge — hcarson / detail
  692. Updates so avro+Wake appears to be working — galbramc / detail
  693. fixed ReferenceElement constraint jacobian assignment ya dingus. — cfrontin / detail
  694. fixed ReferenceElement constraint jacobian assignment ya dingus, pt. II: unit testing boogaloo — cfrontin / detail
  695. Removed pivoting change that was dumb anyway. — cfrontin / detail
  696. Combined into one file — ursachi / detail
  697. sandbox updates — arthuang / detail
  698. moving towards rans adaptive cg — arthuang / detail
  699. RANS test case working — arthuang / detail
  700. rans joukowski working for real? — arthuang / detail
  701. Fixed link errors — galbramc / detail
  702. More fixes for avro+Wake. Needs some more checks. — galbramc / detail
  703. Forgot files — galbramc / detail
  704. Fixed compile error — galbramc / detail
  705. Split up the Adaptation library by dimension — galbramc / detail
  706. Compile error fix — galbramc / detail
  707. Fix link errors — galbramc / detail
  708. Another link error — galbramc / detail
  709. Migrated single boundary layer scalarfunction from 4D to 3D+T — cfrontin / detail
  710. Remove debug files — galbramc / detail
  711. Don't run avro with wakes due to failing debug dumps in avro — galbramc / detail
  712. Split avro Wake edges that span the entire wake — galbramc / detail
  713. Trying to split segments on wakes, but I need help... — galbramc / detail
  714. Fail depends tests if files are generated — galbramc / detail
  715. Reworking MOESS to use Field_CG — galbramc / detail
  716. revert away from Philip's local split — arthuang / detail
  717. update error estimate unit test — arthuang / detail
  718. unused variable — arthuang / detail
  719. added gravity to 2D two phase case — ericdow / detail
  720. New parameters for new EPIC 10.3 executable — galbramc / detail
  721. More reworking of MOESS — galbramc / detail
  722. More cleaning of MOESS — galbramc / detail
  723. Fix ccache path for SANS_Depend tests — galbramc / detail
  724. Another script fix for depends — galbramc / detail
  725. catch invalid split for high-order — pcaplan / detail
  726. Lots more work towards refactored MOESS — galbramc / detail
  727. More work on MOESS — galbramc / detail
  728. updated ADST cases. — cfrontin / detail
  729. MOESS refactoring to use fields seems to be done. — galbramc / detail
  730. Fixed includes — galbramc / detail
  731. Fixed parallel print statement — galbramc / detail
  732. SANS optimizer was using wrong initial step matric. — galbramc / detail
  733. Fixed bug in edge length deviation — galbramc / detail
  734. Minor fixes — galbramc / detail
  735. More ping tests — galbramc / detail
  736. Split up ProjectGlobalField — galbramc / detail
  737. Asymmetric cost schedule — galbramc / detail
  738. CMake updates — galbramc / detail
  739. continued working on debugging two phase gravity fluxes — ericdow / detail
  740. TAO implied metric calculation works in parallel — galbramc / detail
  741. Fix typo — galbramc / detail
  742. Remove mesh_0.json from tests with avro — galbramc / detail
  743. More work towards parallel MOESS with TAO — galbramc / detail
  744. Some compile fixes — galbramc / detail
  745. Synchronize error models in ghost/zombie cells — galbramc / detail
  746. Parallel MOESS is very close — galbramc / detail
  747. Link error fixes — galbramc / detail
  748. Some small fixes — galbramc / detail
  749. working out RANS stabilization terms — arthuang / detail
  750. pre merge — hcarson / detail
  751. Stole MMA from NLopt to parallelize with TAO. — galbramc / detail
  752. Added paralel serial equivalence test for MOESS TAO-MMA — galbramc / detail
  753. If I TAO+MMA does not wory, try MMA+MPI — galbramc / detail
  754. oliver test is running, not getting right rates yet — arthuang / detail
  755. Added artificial viscosity to tilted reservoir test case — savithru / detail
  756. version used in the git bisect — hcarson / detail
  757. refactored stabilized CG — arthuang / detail
  758. more robust quadrature tests, shouldn't have issues with quadrature caching. — cfrontin / detail
  759. push to laptop in the middle of updating RANSSA — arthuang / detail
  760. missing term for adjoint in RANSSA.. needs unit testing — arthuang / detail
  761. rans sourcegradientjacobiangradient thoroughly unit tested — arthuang / detail
  762. Added pressure integral output for two-phase. Modified tilted reservoir test-case. — savithru / detail
  763. Parallel MMA algorithm! — galbramc / detail
  764. Forgot the unit test — galbramc / detail
  765. and the actual files — galbramc / detail
  766. more forgotten files — galbramc / detail
  767. Some vera fixes — galbramc / detail
  768. took out demote surreal — arthuang / detail
  769. unit tests updated for stabilized integrand — arthuang / detail
  770. changes to error model to use order scaling in the regularization — hcarson / detail
  771. A number of fixes for parallel MOESS — galbramc / detail
  772. copyright notice fix — hcarson / detail
  773. fixing a function that got mangled somehow/sometime — hcarson / detail
  774. license error — hcarson / detail
  775. Updated ErrorModel_Element unit test — galbramc / detail
  776. Fixed warning and relaxed tolerance — galbramc / detail
  777. More minor fixes — galbramc / detail
  778. Added another derivative of St option — galbramc / detail
  779. Really really relaxed tolerance for Parallel/Serial equivalence for TAO with Intel... not sure whats up with that... — galbramc / detail
  780. updates to strongform integrand — arthuang / detail
  781. added needed hooks to 3D for stabilized CG — arthuang / detail
  782. Nightly fixes — galbramc / detail
  783. Trying to improve the speed of XField_Lagrange — galbramc / detail
  784. add RANS ndconvert omterface — arthuang / detail
  785. fixed up RANS asymptotic — arthuang / detail
  786. added trace on scalar, bug in new source fcn in 3d — arthuang / detail
  787. fixed unit test, mod source — arthuang / detail
  788. new adjoint analytic function for 1D BL — arthuang / detail
  789. added needed hooks for AV, implementation will be needed — arthuang / detail
  790. getting unit tests to pass — arthuang / detail
  791. working on RANS... — arthuang / detail
  792. relax tol on unit test — arthuang / detail
  793. truly linear adjoint — arthuang / detail
  794. caught some bugs, put in unit tests — arthuang / detail
  795. pre merge — hcarson / detail
  796. Quadrature fix on AD3DST. — cfrontin / detail
  797. AD4DST refactor. — cfrontin / detail
  798. orthodoxy is unconsciousness. — cfrontin / detail
  799. quadrature fixes — cfrontin / detail
  800. AD4D update. — cfrontin / detail
  801. Fixed some analyzer warnings — galbramc / detail
  802. One more analyzer suppression — galbramc / detail
  803. Some MPI cleanup — galbramc / detail
  804. target dof factor — pcaplan / detail
  805. always forget to switch local split — pcaplan / detail
  806. horizontal tab — pcaplan / detail
  807. wake tests were originally off — pcaplan / detail
  808. Finalized moving nDOFpossessed to Field — galbramc / detail
  809. Added missing include — galbramc / detail
  810. settings for Marshall to run — hcarson / detail
  811. Fixed a bug in PTC residual indexing — shunz / detail
  812. Add debug information for MassMatrix singular matrix errors — galbramc / detail
  813. fixes to mesh adapt — hcarson / detail
  814. Missing include — galbramc / detail
  815. Enabled daisy chain in algebraic equation set class for PTC.  Refactored (and hopefully clarified) calculation of pseudo-transient contributions to residuals and jacobians — shunz / detail
  816. Fixed a bug in PTC AES's cell group integration calls, and a bug in residualPseudoTemporal daisy-chain call — shunz / detail
  817. Enabled PTC for coupled IBL of 4x4 block system — shunz / detail
  818. Updated unit test — shunz / detail
  819. CG RANS is looking more promising... — arthuang / detail
  820. loops in rans joukowski — arthuang / detail
  821. One more missing include — galbramc / detail
  822. fixes for jenkins — hcarson / detail
  823. fixed excessively small initial case... now starting from predicted uniform box size. — cfrontin / detail
  824. Added solve4d smart dof case. — cfrontin / detail
  825. added hooks for BICGStab — arthuang / detail
  826. Speed improvements for UniqueElem and XField_Lagrange — galbramc / detail
  827. Purged matrix manipulation Nishida hack — galbramc / detail
  828. fixed test to match ErrorModel_Elemental.h — hcarson / detail
  829. One move too many — galbramc / detail
  830. playing around with stabilization — arthuang / detail
  831. RANS with scaling — arthuang / detail
  832. Fix for jenkins parallel make — galbramc / detail
  833. Updates to porous media PDEs: added gravity to 2D two-phase, added pressure output functional — savithru / detail
  834. Vera fixes — savithru / detail
  835. Fixed copyright notice — savithru / detail
  836. One more fix.. — savithru / detail
  837. Fix uninitialized value — savithru / detail
  838. Some cleanup in PTC — shunz / detail
  839. Fixed a bug in PTC daisy chain implementation: previously, past solution and time step field was not properly updated for daisy-chained equations — shunz / detail
  840. reapply quadorder fix. — cfrontin / detail
  841. Fix for singular matrix detection. Only guard against 1/0. — galbramc / detail
  842. Separating out LAPACK from LAPACKE — galbramc / detail
  843. Fixes for LAPACK interface — galbramc / detail
  844. Forgot to switch back a change — galbramc / detail
  845. Only test with LAPACKE on reynolds — galbramc / detail
  846. Don't show LAPACKE as an option on OSX — galbramc / detail
  847. Minor fix — galbramc / detail
  848. Include MKL in coverge testing — galbramc / detail
  849. Source intel for coverage — galbramc / detail
  850. Fixes for checking LAPACK — galbramc / detail
  851. Automatic checking of all lapack functions used by SANS — galbramc / detail
  852. Some small fixes — galbramc / detail
  853. Relax tolerance a bit more for intel — galbramc / detail
  854. Added maximum rate matrix output — galbramc / detail
  855. updated i/o on 4d cases. — cfrontin / detail
  856. New files for Adjoint consistent potential — galbramc / detail
  857. Cleanup trace matrix print — galbramc / detail
  858. Forgot a file — galbramc / detail
  859. working on RANS — arthuang / detail
  860. Fixes for latest refine — galbramc / detail
  861. agls formulation looks better? — arthuang / detail
  862. modified RANS tests — arthuang / detail
  863. pre merge — hcarson / detail
  864. typo denomerator to denominator — hcarson / detail
  865. caught an indexing bug with interior trace groups — hcarson / detail
  866. some tweaks as was retesting using elemental estimates. They still don't work (phew....) — hcarson / detail
  867. changed the Galerkin DoubleBL case to match up with the DG one — hcarson / detail
  868. changed checkGrid() to assert(assertGrid()). This is the same as checkGrid() in debug mode, but gets removed in release — hcarson / detail
  869. bug fixes and clean up — hcarson / detail
  870. undoing the assertGrid, it doesn't work how I thought it did — hcarson / detail
  871. updated io on 2D+T cases. — cfrontin / detail
  872. fixed solve4d i/o — cfrontin / detail
  873. fixes to make the avro grids work in the adapt — hcarson / detail
  874. fixed h approximation, *philip's tableflip emoticon*. — cfrontin / detail
  875. oops. — cfrontin / detail
  876. hooks for modifying order and power and command line — hcarson / detail
  877. fixed dumbass error. — cfrontin / detail
  878. Minor fixes per intel guide. Fix avro+wake. — galbramc / detail
  879. still working on RANS... — arthuang / detail
  880. Some fixes for BLAS and turn off one Wake test — galbramc / detail
  881. adding new parmafield builders — arthuang / detail
  882. Forgot file dump — galbramc / detail
  883. Updated EPIC interface — galbramc / detail
  884. distance function gradient working — arthuang / detail
  885. hack for sourcegradient compiles — arthuang / detail
  886. unitialized warnings from jenkins — hcarson / detail
  887. tweak for hypersonic — hcarson / detail
  888. found a bug in RANS source gradients — arthuang / detail
  889. this one not that one — arthuang / detail
  890. deprecated ElementDual local patch. Everyone can use Element now, and it should throw an exception if you run with ElementDual — hcarson / detail
  891. added the spaceType to the dummy problems — hcarson / detail
  892. sigh. forgot they need override — hcarson / detail
  893. maaaaaan — hcarson / detail
  894. sigh — hcarson / detail
  895. Fix for PETSc 3.11 — galbramc / detail
  896. moved the all_reduce inside the #define of Boundary Outputs. The FunctionalCell_Galerkin already includes an all_reduce — hcarson / detail
  897. Setup for Mike Park to test metric calculations — galbramc / detail
  898. commiting the new error model and the two double boundary layer cases to run on hypersonic — hcarson / detail
  899. Fix nightly clang warning — galbramc / detail
  900. typos and a small test for the DOF Map, didn't catch anything... — hcarson / detail
  901. playing with formulations, added source to BC — arthuang / detail
  902. getting closer — arthuang / detail
  903. SA wake test case — arthuang / detail
  904. minor edits to rans, unit tests — arthuang / detail
  905. i think the stabilization is sound... — arthuang / detail
  906. Added case to adaptND_mesh_optimizer_toy to easily generate unstructured uniform grids. — cfrontin / detail
  907. SolveND_DGBR2_AD_ST_toy for 3D and 4D now have grid loading capability, but it's ifdeffed out for now. — cfrontin / detail
  908. fixed #define — cfrontin / detail
  909. start from DG grids — arthuang / detail
  910. more tinkering with RANS — arthuang / detail
  911. nitsche param now includes source term — arthuang / detail
  912. Added 2D+T CG unstabilized advection diffusion mechanics. — cfrontin / detail
  913. added an integrand for estimating the square of the L2 error locally — hcarson / detail
  914. locked the TopoDim template to the Topology::TopoDim template. We should not be templating on both here, these should be removed — hcarson / detail
  915. added some integral tests — hcarson / detail
  916. A class for computing L2 error estimates, either nodally or elementally — hcarson / detail
  917. Reduced ErrorOrder_4D_DG_Pentatope_btest max grid size to reduce runtime — galbramc / detail
  918. Fixed uninitialized data with intel — galbramc / detail
  919. removed TopoDim from the for_each_XXX functions. Also added Topology::CellTopoDim, which gives the dimension of the topology for which Topology was a trace. — hcarson / detail
  920. Also made a GalerkinLib in the process of splitting out the local solve machinery for CG to use in the L2 proction solver — hcarson / detail
  921. fixing up unit tests to match new indicator calculation. Also changing mitState Nitsche to use the p independent lengthL. Will then need to choose constants properly some other way. — hcarson / detail
  922. A Nodal error estimate order test — hcarson / detail
  923. refactor into explicit instantiations and added GalerkinLib to a CMakeLists.txt I forgot — hcarson / detail
  924. more instantiations and fix a bug — hcarson / detail
  925. moving towards a CG L2 local projection. — hcarson / detail
  926. updating error estimate order tests. DG now uses the mitState BC, the CG one does not as it can't achieve the rates. There must be an instability in the adjoint.... — hcarson / detail
  927. Use CG local patch bcs for the local solve — hcarson / detail
  928. actually added the declaration to the header... — hcarson / detail
  929. Added a re-roll of the c++-14 make_unique feature — hcarson / detail
  930. Added a re-roll of the c++-14 make_unique feature — hcarson / detail
  931. first use of make_unique. — hcarson / detail
  932. ErrorEstimateL2 should now handle p0 or p1 estimation gracefully, and also actually handled that stupid merge conflict — hcarson / detail
  933. Fixed many clang analyzer complaints — galbramc / detail
  934. new MDG directory — arthuang / detail
  935. MDG integrand cell unit test passing — arthuang / detail
  936. changed name of test and added the notebook that generated the L2 error integrand tests — hcarson / detail
  937. forgot an mpi include — hcarson / detail
  938. all_reduce only works on POD not the KahanSum — hcarson / detail
  939. some tweaks — hcarson / detail
  940. interior trace w/ 1d unit test — arthuang / detail
  941. missed a bracket in the merge — arthuang / detail
  942. jacobian ping test added for cell,trace — arthuang / detail
  943. forgot to turn CG LG trace back on — hcarson / detail
  944. added CG sandbox for AD 2D+T problem. — cfrontin / detail
  945. Fixed more analyzer warningw — galbramc / detail
  946. fixed for push, incorporated hugh's mistakenly included preprocessor define. — cfrontin / detail
  947. more hugh fixes plus trueoutput fixes. — cfrontin / detail
  948. SolverInterfaceL2 project actually uses the correct local patch for CG now — hcarson / detail
  949. JEEEEENNNNKIONNNNSSSSS — cfrontin / detail
  950. added SA nitsche — arthuang / detail
  951. jacobian and residual unit tests passing — arthuang / detail
  952. Fixed typo — galbramc / detail
  953. jenkins punched me in the face *again*. — cfrontin / detail
  954. MDG solve works.. needs debugging — arthuang / detail
  955. grumble — cfrontin / detail
  956. VOLUME_WEIGHTED crept through on those last commits. It shouldn't have and this fixes that — hcarson / detail
  957. why oh why did i not save the fixes last time — cfrontin / detail
  958. preprocessor sandbox troubles. — cfrontin / detail
  959. dumb preprocessor stuff fix. — cfrontin / detail
  960. bad include habits fixed. — cfrontin / detail
  961. MDG solves! optimal rates! — arthuang / detail
  962. warning fix. — cfrontin / detail
  963. getting closer to everything compiling — arthuang / detail
  964. moved jacobian calculations into output integrands for Galerkin. bunch of stuff still not working — arthuang / detail
  965. getting closer to passing unit tests.. — arthuang / detail
  966. unit tests updated — arthuang / detail
  967. unit test/compile fixes — arthuang / detail
  968. indentation warning — arthuang / detail
  969. last final last warning bother. — cfrontin / detail
  970. tidying solve3d_CG_AD_ST_toy — cfrontin / detail
  971. MDG jacobianfunctional in place, solves are compiling — arthuang / detail
  972. MDG compiles fine but doesn't stabilize in advective limit. Hmm... — arthuang / detail
  973. MDG working well again.. we have to figure out the Nitsche BCs — arthuang / detail
  974. change cb back to 2 to pass Jenkins — arthuang / detail
  975. 2D error order compiling — arthuang / detail
  976. add function hooks to 3DST — arthuang / detail
  977. added function hooks for 1d, 2d spacetime — arthuang / detail
  978. fieldweighted cell integrand for MDG — arthuang / detail
  979. added fieldweighted for MDG trace integrand — arthuang / detail
  980. More clang analyzer warning fixes. — galbramc / detail
  981. more needed function hooks — arthuang / detail
  982. change to isothermal wall BCs, push to hypersonic — arthuang / detail
  983. ughhhhhh more ndconvert troubles — arthuang / detail
  984. add isothermal to RANs BCs — arthuang / detail
  985. removed unused typedef — arthuang / detail
  986. Nightly fixes — galbramc / detail
  987. fixed mdg unit tests — arthuang / detail
  988. Nightly fixes — galbramc / detail
  989. reordered MDG jac, added error estimate cell — arthuang / detail
  990. RANS cases working pretty well, pushing to hypersonic — arthuang / detail
  991. mdg error estimates in place — arthuang / detail
  992. took out adjointState functions (mostly) — arthuang / detail
  993. completed sourceJacobianHACK change. MDG adjoints not quite working... — arthuang / detail
  994. error estimate unit test passing, but sandbox case is off... — arthuang / detail
  995. mdg error estimates working! — arthuang / detail
  996. typo — arthuang / detail
  997. cleanup — arthuang / detail
  998. fixed hack interface — arthuang / detail
  999. added unit testing for 3D RANS fncs, other cleanup — arthuang / detail
  1000. forgot a file — arthuang / detail
  1001. sandbox edits — arthuang / detail
  1002. complaining about includes? — arthuang / detail
  1003. unused variables.. push to tucano for memcheck — arthuang / detail
  1004. unit test name change — arthuang / detail
  1005. missing definition — arthuang / detail
  1006. trying to fix segfault — arthuang / detail
  1007. fixed the warning, but there's a segfault somewhere in edgelocal3d... — arthuang / detail
  1008. wow that was really dumb but took 4 hours to find — arthuang / detail
  1009. putting Nitsche into stabilization object.. stil lin process — arthuang / detail
  1010. premerge — arthuang / detail
  1011. most things compiling... — arthuang / detail
  1012. nitsche parameter change complete.. things seem to compile ok — arthuang / detail
  1013. member variables out of order — arthuang / detail
  1014. Added unit tests for gravity term in PDETwoPhase2D + some cleanup — savithru / detail
  1015. tweaks to get MDG working for systems — arthuang / detail
  1016. fixed checks for parallel — arthuang / detail
  1017. whoops switched back — arthuang / detail
  1018. hopefully more correct for parallel? — arthuang / detail
  1019. Nightly fixes — galbramc / detail
  1020. Another nightly fix — galbramc / detail
  1021. More nightly fixes — galbramc / detail
  1022. Another nightly fix — galbramc / detail
  1023. Hopefully last warning fix — galbramc / detail
  1024. minor edits that shouldn't affect anything — arthuang / detail

#233 (Feb 2, 2019, 1:52:07 AM)

  1. Added H tensor output from Euler2D — blsc / detail
  2. Working on new AFLR4 interface — galbramc / detail
  3. some tweaks — hcarson / detail
  4. tweaks — hcarson / detail
  5. Debugging AFLR4 — galbramc / detail
  6. removing erroneous refine things — hcarson / detail
  7. getting acdl develop CMakeIncludes — hcarson / detail
  8. more tweaks — hcarson / detail
  9. moving to hypersonic — hcarson / detail
  10. change to let MPI build the directories just in time — hcarson / detail
  11. too many white lines — hcarson / detail
  12. to run on devastator — hcarson / detail
  13. tweaks for hypersonic — hcarson / detail
  14. Nodal Error estimate. Takes the average of the attached nodes, the estimation happens using the weak form directly — hcarson / detail
  15. hacking about trying Nodal Estimation — hcarson / detail
  16. typo/bug maybe? — hcarson / detail
  17. another one — hcarson / detail
  18. pre merge — hcarson / detail
  19. Multiscale metric case, debugging printing a continuous Mach number field — hcarson / detail
  20. pre merge — hcarson / detail
  21. forgot to assert the basis was the same for the two fields — hcarson / detail
  22. projects from the Dfld basis onto the Cfld basis so accumulating to the dofs is consistent now — hcarson / detail
  23. pre merge — hcarson / detail
  24. seems to write Mach number solbs now — hcarson / detail
  25. moving to hypersonic — hcarson / detail
  26. a fix to go to hypersonic — hcarson / detail
  27. weird tecplot bug — hcarson / detail
  28. compiles again, moving to devastator — hcarson / detail
  29. MultiScaleMetric for transfering to NASA — hcarson / detail
  30. moving to laptop — hcarson / detail
  31. transfering to Dev — hcarson / detail
  32. moving to devastator to get EPIC — hcarson / detail
  33. --ammend — hcarson / detail
  34. moving to devastator — hcarson / detail
  35. transfering to dev — hcarson / detail
  36. moving to hyper — hcarson / detail
  37. pre merge — hcarson / detail
  38. tweak — hcarson / detail
  39. added output dump info to MultiScaleMetric case, should be ready to really run cases now — hcarson / detail
  40. making MultiScale and MOESS cases consistent and ready for hypersonic — hcarson / detail
  41. tweaks back to labbox — hcarson / detail
  42. Updates for edge based AFLR4 calculations — galbramc / detail
  43. Backwards facing step unit grid — hcarson / detail
  44. pre merge commit — hcarson / detail
  45. backwards step cases — hcarson / detail
  46. removed SolverInterface_Nodal_Galerkin, it ended up only a tiny tweak from SolverInterface_Galerkin, so changed that instead — hcarson / detail
  47. added options for tweaking order of the tau stabilization. Can force the stabilization to be at a different polynomial order than the actual solve now — hcarson / detail
  48. added Arthur's version of Experimental, copied from his email — hcarson / detail
  49. preprocessor defined version with volume weighting, ought to remove this later — hcarson / detail
  50. forgot the CMakeLists — hcarson / detail
  51. DG case updates — hcarson / detail
  52. nodal test passes again — hcarson / detail
  53. pre merge — hcarson / detail
  54. moving back to nia — hcarson / detail
  55. moving to dev — hcarson / detail
  56. tweaks to case — hcarson / detail
  57. Started a single-field IBL formulation — shunz / detail
  58. Bug fix — shunz / detail
  59. Added PDEIBL class in a single-field formulation — shunz / detail
  60. Fixed compiler errors — shunz / detail
  61. Completed UniField IBL uncoupled case of laminar BL over airfoil — shunz / detail
  62. Just file renaming — shunz / detail
  63. Coupled IBL UniField is working now.  No transition yet. — shunz / detail
  64. Fixed complier warnings and errors — shunz / detail
  65. Added a forced transition case for three-field IBL — shunz / detail
  66. Fixed compiler error — shunz / detail
  67. Refactored GalerkinWeightedIntegral for cut-cell transion IBL.  Started working on UniField implementation — shunz / detail
  68. Added UniField IBL cut-cell integrand class — shunz / detail
  69. minor edit — shunz / detail
  70. Intermediate commit: working on UniField IBL — shunz / detail
  71. Pruned some ping tests for speedup — shunz / detail
  72. pre merge — hcarson / detail
  73. moving to dev — hcarson / detail
  74. pre merge — hcarson / detail
  75. UniField IBL now working with cut-cell forced transition — shunz / detail
  76. Added a 4x4 system ping test for cut-cell UniField IBL forced transition — shunz / detail
  77. Added a 4x4 system ping test for cut-cell UniField IBL natural transition — shunz / detail
  78. Playing with natural transition cut-cell UniField IBL test case — shunz / detail
  79. added an argument for fixing the order used in the calculation of tau. Thus the same tau is used in the primal and the adjoint calculation. — hcarson / detail
  80. mod solution fcn — arthuang / detail
  81. Minor cleanup before pushing to Jenkins — shunz / detail
  82. Fixed compilation error — shunz / detail
  83. Fixed point source term at transition (aka ctau fitting) — shunz / detail
  84. moving to dev — hcarson / detail
  85. moving to dev — hcarson / detail
  86. First converged case with cut-cell UniField IBL forced transition — shunz / detail
  87. 2D refine interface, it doesn't work yet — hcarson / detail
  88. hacks to move to NASA box — hcarson / detail
  89. Output primary unknowns (delta, A) before scaling — shunz / detail
  90. Fixed typo — shunz / detail
  91. Examined DG residual smoothness on p0 and p1 — shunz / detail
  92. Added a new transition front flux formulation that is consistent with DG full-upwind interface flux scheme — shunz / detail
  93. Added remarks — shunz / detail
  94. Renamed macro — shunz / detail
  95. Added a separate trace unit normal formulation for manifold interior trace integrand — shunz / detail
  96. Refactored duplicate-field cut-cell IBL numerical flux at element interface and transition front to make them consistent.  Many pyrite files are no longer valid (to be fixed later) — shunz / detail
  97. Replaced amplification factor growth rate term in turbulent BL regions — shunz / detail
  98. Minor edits — shunz / detail
  99. went back to nNodes for advective stabilization — arthuang / detail
  100. Removed IO files — shunz / detail
  101. minor edits — shunz / detail
  102. added comments — shunz / detail
  103. Updated printout — shunz / detail
  104. changed to all take order of stabilization as argument to stab — hcarson / detail
  105. Turned off one upwind flux advective method in Projection to Qauxi.  Switched from full upwinding to LF flux — shunz / detail
  106. diff got lost in the merge, and a line too long — hcarson / detail
  107. forgot the refine preprocessor bits, and a curly brace was one space away from where it should be — hcarson / detail
  108. vera fixes — hcarson / detail
  109. forgot another one — hcarson / detail
  110. tweaks for jenkins — hcarson / detail
  111. curly braces again — hcarson / detail
  112. fixed coarsening node numbering bug, added a unit test to guard it — hcarson / detail
  113. forgot some things — hcarson / detail
  114. fixed warning about unread data — hcarson / detail
  115. modified stabilized output, reverted to node based advection stabilization — arthuang / detail
  116. sandbox, added high order quads to PX mesh reader, fixed periodic bug in DG — jzavala / detail
  117. Removed tabs from files in previous commit. — jzavala / detail
  118. stabilization consistent and passing unit tests. updated nitsche parameters — arthuang / detail
  119. Fixed curly brackets formatting in previous commit's files. — jzavala / detail
  120. Minor cleanup — galbramc / detail
  121. Fixed continuous-param assumption for fluxViscous — blsc / detail
  122. Unit tests passing with param bug fix — blsc / detail
  123. Fixed a nightly warning — galbramc / detail
  124. 1D spacetime shock problems — blsc / detail
  125. Formatting errors — blsc / detail
  126. More bug fix — blsc / detail
  127. Adding hinge computation from CSM. Other minor cleanup. — galbramc / detail
  128. Intermediate commit: working DG cut-cell IBL of various formulations.  Now switching to try HDG — shunz / detail
  129. Revert "Merge branch 'threeFieldIBL' into shunz/develop" — shunz / detail
  130. Revert "Revert "Merge branch 'threeFieldIBL' into shunz/develop"" — shunz / detail
  131. Added a pure advection HDG system test — shunz / detail
  132. Refactored residual HDG to handle tuple of qfld and afld — shunz / detail
  133. Refactored HDG boundary trace residual and jacobian to handle tuple of qfld and afld — shunz / detail
  134. minor edits — shunz / detail
  135. testing with avro — pcaplan / detail
  136. Shouldn't have removed an include — shunz / detail
  137. Forward facing step unit grid and spacetime euler2d artificial viscosity — blsc / detail
  138. Turned off some debug output — blsc / detail
  139. PETSc option for spacetime forward facing step — blsc / detail
  140. Work towards Zombie DOFs — galbramc / detail
  141. Updates for LIP solver to use hinge lines — galbramc / detail
  142. Fixed inconsistency in LIPSolver sensitivity — galbramc / detail
  143. Fixed PETSc setup in step case — blsc / detail
  144. Unit test for forward facing step grid — blsc / detail
  145. New Euler BC unit tests — blsc / detail
  146. Fixed index bug for Zombies — galbramc / detail
  147. commenting and formatting — shunz / detail
  148. Tweak for building tetgen with MSYS — galbramc / detail
  149. Minor edits on existing established code — shunz / detail
  150. drafted interior trace integrand and residual for HDGAdvective — shunz / detail
  151. Added system call option for refine — galbramc / detail
  152. Maybe BDF case for forward facing step — blsc / detail
  153. Updates for calling refine with a system call — galbramc / detail
  154. Minor edit — shunz / detail
  155. Refactored/completed HDGAdvective interior trace machinery (integrand, residual, jacobian) — shunz / detail
  156. ResidualBoundaryTrace stuff compiling for HDGAdvective — shunz / detail
  157. More refine fixes — galbramc / detail
  158. One more refine fix. And some sansLIPAIM fixes. — galbramc / detail
  159. Missing include — galbramc / detail
  160. Correct missing include — galbramc / detail
  161. Minor fix — galbramc / detail
  162. Refactored interior trace machinery for HDGAdvective — shunz / detail
  163. HDGAdvective equation set compiiles now with residuals and jacobians — shunz / detail
  164. minor refactoring — shunz / detail
  165. Cleaned up HDGAdvective test case, and some other minor refactoring — shunz / detail
  166. Found and fixed a bug when conducting ping test: forgot to set qIfldElemTrace.  Other minor refactoring — shunz / detail
  167. Bug fix in HDGAdvective boundary jacobian — shunz / detail
  168. Completed ping tests and ErrorOrder test for HDGAdvective (pure advection with source) — shunz / detail
  169. Made the volume generator option for sansLIP. — galbramc / detail
  170. Default meshesr for sansLIP — galbramc / detail
  171. Added Lagrange-basis duct mesh creator and corresponding sandbox test file. — jzavala / detail
  172. minor refactoring — shunz / detail
  173. Added discretization tag template to HDGAdvective AES class — shunz / detail
  174. Generalized HDGAdvective interior trace integrand class — shunz / detail
  175. Got HDGAdvective cell and interior trace to compile — shunz / detail
  176. Refactored None BC for HDGAdvective — shunz / detail
  177. Working on a bug in sansLIPAIM — galbramc / detail
  178. Added ping test to HDGAdvective for uncoupled IBL on airfoil only — shunz / detail
  179. sansLIPAIM fix — galbramc / detail
  180. Fixed sansLIP data transfer with hinge bodies — galbramc / detail
  181. Use hacky isValidState checks for HDGAdvective:  not checking trace variables yet — shunz / detail
  182. Fixed formatting errors. — jzavala / detail
  183. HDGAdvective uncoupled IBL (with airfoil only) now works and matches DG IBL — shunz / detail
  184. Fixed an include — shunz / detail
  185. moess to minimize distance between implied metric and target field — pcaplan / detail
  186. move to new branch — pcaplan / detail
  187. minor cleanup — shunz / detail
  188. a few (very simple) pentatope things — pcaplan / detail
  189. metric optimisation to match target metric — pcaplan / detail
  190. delete bad stuff — pcaplan / detail
  191. Fixed more formatting errors. — jzavala / detail
  192. Renamed duct mesh generator header and source files and edited corresponding includes. — jzavala / detail
  193. testing with metric optimizer, will definitely fail jenkins — pcaplan / detail
  194. forgot to remove cmake add_subdir for my sandbox, will gitignore — pcaplan / detail
  195. vera fixes, missing file — pcaplan / detail
  196. try to fix invalid initializations — pcaplan / detail
  197. Cleanup.  Working on HDGAdvective hubtrace — shunz / detail
  198. Renamed the duct mesher file mentioned inside CMakeLists.txt — jzavala / detail
  199. Get coupled IBL to compile with HDGAdvective — shunz / detail
  200. removed the rfld dumping as it doesn't work in parallel — hcarson / detail
  201. changed monomial to accept reals, added a 1D L2Projection toy — hcarson / detail
  202. changed monomial to accept reals, added a 1D L2Projection toy — hcarson / detail
  203. Updated constructor signature — shunz / detail
  204. Added ping test for coupled HDGAdv IBL system.  [TBD]: JacobianParam and hubtrace stuff — shunz / detail
  205. sandbox edits — arthuang / detail
  206. revert sandbox not working — arthuang / detail
  207. Added Pseudo Time solving to DGAdvective Smoothbump toy. — jzavala / detail
  208. Cleaned up duct mesh generator files. — jzavala / detail
  209. Added arc mesh generator and corresponding toy test file. Updated CMakeLists accordingly. — jzavala / detail
  210. Various fixes for LIP AIM — galbramc / detail
  211. Relaxed unit test timing a bit more — galbramc / detail
  212. relax tol — arthuang / detail
  213. Renamed arc mesh generator files to annulus. Minor changes elsewhere. — jzavala / detail
  214. HDGAdv progress: (1) jacobian w.r.t. parameter field now working for interior traces;  (2) hubtrace jacobian and residual now working — shunz / detail
  215. Minor change. — jzavala / detail
  216. Completed HDGAdv jacobian w.r.t. parameter fields at boundary traces — shunz / detail
  217. Turned on HDGAdv jacobian w.r.t. paramter field at HubTrace, and it just worked — shunz / detail
  218. Ping test fixed, but the resulting jacobian is too ill-conditioned such that linear solver fails.  Original DG stuff also suffers the same problem.  Probably broke sth in some previous commits --> To be fixed — shunz / detail
  219. Minor fixes. — jzavala / detail
  220. branch change — hcarson / detail
  221. Removed non-determinstic wake intersection — galbramc / detail
  222. Fixed compile errors — galbramc / detail
  223. Another compile problem — galbramc / detail
  224. Undo — galbramc / detail
  225. Lots of work towards Zombies — galbramc / detail
  226. Forgot a file — galbramc / detail
  227. Fixed compile error — galbramc / detail
  228. Added sansLIPAIM to jenkins compile — galbramc / detail
  229. Hopefully fixed local2native DG indexing — galbramc / detail
  230. Updated and verified existing test cases — shunz / detail
  231. Added ping test for HDGAdvective HubTrace AES of uncoupled IBL — shunz / detail
  232. Added ping test — shunz / detail
  233. minor refactoring — shunz / detail
  234. minor refactoring — shunz / detail
  235. Intermediate commit: debugging coupled IBL — shunz / detail
  236. Coupled IBL with HDGAdv looks good qualitatively, compared to DG results from acdl/develop branch version.  Ping test produces ill-conditioned jacoabian, which should be expected given the ill-conditioned amp equation (aka without proper initial condition at stagnation point) — shunz / detail
  237. Fix for zombie counting — galbramc / detail
  238. Implemented HDGAdv cut-cell transition, and added ping test for forced transition — shunz / detail
  239. Higher-resolution ShuOsher case — blsc / detail
  240. added order and power runtime flags — hcarson / detail
  241. Added ping test for natural transition of HDGAdv cut-cell IBL — shunz / detail
  242. Added HDGAdv cut-cell case with natural transition — shunz / detail
  243. tweaks to case and considering a different stabilization — hcarson / detail
  244. Fixed a bug in HDG interface equation of ctau — shunz / detail
  245. Enabled checking of state validity of interior trace DOFs of HDGAdv — shunz / detail
  246. Q1D Adaptive Giles Pierce nozzle with p-sequencing — ursachi / detail
  247. Fixed bugs in HDG-IBL interface fluxes and equations — shunz / detail
  248. Added supersonic outflow BC — ursachi / detail
  249. Created grid and test case for adaptive 2D Giles Pierce nozzle — ursachi / detail
  250. switched amp source, and transition front flux treatment — shunz / detail
  251. minor refactoring on HDGAdv integrands for IBL — shunz / detail
  252. Hacking with mitLG type of matching condition at element interfaces and transition front.  Hacks are turned off in this commit — shunz / detail
  253. minor refactoring — shunz / detail
  254. working on a new tau and moving some stuff to dev — hcarson / detail
  255. allowing command line spec — hcarson / detail
  256. VMS seems to be adapting properlygit status! — hcarson / detail
  257. conflicts — hcarson / detail
  258. typo — hcarson / detail
  259. put HDG interface flux and matching equation (source) into one function — shunz / detail
  260. Fixed the interface flux and source for the other version of HDG-IBL as well — shunz / detail
  261. changing back to nDOF — hcarson / detail
  262. testing theory on linear basis for tau — hcarson / detail
  263. reverting to develop — hcarson / detail
  264. tool to guide mesh generator towards target metric from implied one (this build will certainly fail but i just want to get things in the repo — pcaplan / detail
  265. changes to Experimental2, gives p order scaling stabilization now — hcarson / detail
  266. changes to Experimental2, gives p order scaling stabilization now — hcarson / detail
  267. Changes to help converge forward facing step — blsc / detail
  268. DG field now includes zombies — galbramc / detail
  269. Minor fix — galbramc / detail
  270. tweaks — hcarson / detail
  271. fix to SolverInterface, and changes to NSFlat Plate — hcarson / detail
  272. using Exp not Exp2 as missing some instanations for LinAlg. — hcarson / detail
  273. Added missing include — galbramc / detail
  274. Need to remove LocalSolve2D_DGBR2_Triangle_AD_btest — galbramc / detail
  275. Proper parallel DGBR2 LocalSolve — galbramc / detail
  276. Reduce runtime for ElementLocalSolve3D_DGBR2_Tet_AD_btest — galbramc / detail
  277. Reduced number of partitions for ElementLocalSolve2D_DGBR2_Triangle_AD_btest — galbramc / detail
  278. Various fixes — galbramc / detail
  279. Added libMeshb solution reader — galbramc / detail
  280. Reworked multiscale metric so it mostly works — galbramc / detail
  281. Minor fixes — galbramc / detail
  282. Fix link error. Zero out Mach number of walls for MultiScale metric. — galbramc / detail
  283. Tweaks to DeltaWing MultiScale — galbramc / detail
  284. Typo — galbramc / detail
  285. Fixed bug in FunctionalBoundaryTrace_DGBR2 related to new partitioning — galbramc / detail
  286. Fixed some bugs related to new partitioning — galbramc / detail
  287. Forgot some steps in the fixes — galbramc / detail
  288. updated sansLIPAIM with consistent function signatures — galbramc / detail
  289. Reworking CG DOF ordering — galbramc / detail
  290. Added spactime diffusion option for 2D Euler with artificial viscosity — blsc / detail
  291. Updated test for new PDEEuler2D with artificial viscosity interface — blsc / detail
  292. Updated 2D CG edge numbering — galbramc / detail
  293. Added back working spacetime diffusion to euler in artificial viscosity — blsc / detail
  294. Updated 1D euler with optional spacetime diffusion — blsc / detail
  295. Changed Galerkin tag to DGAdv — ursachi / detail
  296. Added asserts to stop bad parameters using for spacetime — blsc / detail
  297. Formatting errors — blsc / detail
  298. Completely reworking CG field constructions — galbramc / detail
  299. More work on new CG Field creation — galbramc / detail
  300. Hopefully fixed intel error by extending boost::mpl::vector — blsc / detail
  301. Tried continuous nt but other variables discontinuous.  Not quite fruitful yet.  Might re-examine this in the future — shunz / detail
  302. Do not check HDG trace variable validity when those variables are Lagrange multipliers instead of primary IBL unknowns — shunz / detail
  303. Cleaned up and only maintained two versions of cut-cell IBL: 1. HDG and DG whose solution are represented with DG fields;  2. HDG hacked so that all unknowns are continous across elements (essentially CG solution) — shunz / detail
  304. Committed a p0 HDG test case. (This is not expected to work for HDG that is hacked to be CG) — shunz / detail
  305. The pyrite file in the last commit seems to be corrupted.. now updated — shunz / detail
  306. NavierStokes2D with artificial viscosity — blsc / detail
  307. Formatting issues — blsc / detail
  308. Missed a few files — blsc / detail
  309. Formatting fix — blsc / detail
  310. Formatting fix — blsc / detail
  311. Formatting fix — blsc / detail
  312. Fixed residual dump to be what is described in the paramter dictionary — shunz / detail
  313. Added pyrite file for uncoupled IBL — shunz / detail
  314. Verified pyrite tests & playing with test cases — shunz / detail
  315. Complete rework of CG field construction. Works in parallel now. Removed zero initialization from fields. — galbramc / detail
  316. Fixed some warnings and compile errors — galbramc / detail
  317. Missing include — galbramc / detail
  318. More field initializations — galbramc / detail
  319. Slight efficiency improvement for HDG adjoint calculation — galbramc / detail
  320. Fixed another uninitialized field — galbramc / detail
  321. Minor edits — shunz / detail
  322. CG works in parallel! — galbramc / detail
  323. CG was missing boundary elements in parallel. Now it works! — galbramc / detail
  324. Fixed warning — galbramc / detail
  325. Added evalReferenceCoordinateHessian for 3D. More unit testing for evalReferenceCoordinateHessian — galbramc / detail
  326. Forgot some DOFs — galbramc / detail
  327. Relaxed tolerances — galbramc / detail
  328. Local solve updates — galbramc / detail
  329. Modified tolerances — galbramc / detail
  330. Remove print statements — galbramc / detail
  331. Updated 1D local solve and removed depricated test — galbramc / detail
  332. Tecplog xfld dump now includes node+cell ranks — galbramc / detail
  333. Include Galerkin integrands for DGBR2 boundary output functionals — galbramc / detail
  334. Fixed the fix — galbramc / detail
  335. Missing include — galbramc / detail
  336. fixing nightly warning — hcarson / detail
  337. Added a class that computes the natural transition location by looping over cells — shunz / detail
  338. Started a new test case to examine iterative forced transition solution — shunz / detail
  339. changed the essential bc application to use ghost boundaries. No longer need to know the neighbourhood at the AlgEqSet level, and other patches should work straight out the box — hcarson / detail
  340. Fix for DGBR2 boundary output functionals — ursachi / detail
  341. BCEuler has vector size greater than 20 — ursachi / detail
  342. Iterative forced transition solution works quite well for the two cases tried — shunz / detail
  343. 2D DGAdvective error estimate order test — ursachi / detail
  344. Changed Nitche to Cb = 2.0 for AD CG P3 adaptation — galbramc / detail
  345. Fixing errors — ursachi / detail
  346. changed Dual to Dual2 in anticipation of the new local solve — hcarson / detail
  347. updated unit tests to use the ghost boundary trace freezing rule — hcarson / detail
  348. preparations for the alternative constructor — hcarson / detail
  349. cleanup of implied metric limiter — pcaplan / detail
  350. vera fixes — pcaplan / detail
  351. Fixing errors — ursachi / detail
  352. didn't mean to include a certain test — pcaplan / detail
  353. switching back to Dual notation, splitting the EdgeLocal and ElementLocal in future — hcarson / detail
  354. moved to ptrs in the base class, dry run for elemental version — hcarson / detail
  355. Topology instantiations and avro cmake updates — galbramc / detail
  356. Dummy push — ursachi / detail
  357. Fixed AVRO cmake typo. Minor format cleanup for limited metric. — galbramc / detail
  358. refactor to move most member variables into the base class XField_Common — hcarson / detail
  359. Forgot a file, and all non edge specific methods are now buried in the base class XField_Local_Common — hcarson / detail
  360. changed a template setup and added a first Element Local test — hcarson / detail
  361. Starting work on AFLR 16.26.2 — galbramc / detail
  362. new splitting routine compiles — hcarson / detail
  363. moved the split function up to Common level, made it more sophisticated to handle edge and element grids at the same time — hcarson / detail
  364. Expanded the 3D split and changed the arguments for the 1D split to match the 2D. Field passing again — hcarson / detail
  365. forgot you can't write to tmp/ — hcarson / detail
  366. find and replace bug — hcarson / detail
  367. typo in file name — hcarson / detail
  368. forgot test directory — hcarson / detail
  369. commented out some impossible branches in 2D, and added another unsplit test — hcarson / detail
  370. unit tests — hcarson / detail
  371. ElementArea now calls the same actual split method as edge local — hcarson / detail
  372. added a copy constructor test, working on testing splits for Element Local — hcarson / detail
  373. a very first element local split test — hcarson / detail
  374. moved some memory outside of loops so it doesn't get created and destroyed so often — hcarson / detail
  375. unit tests for adding in new cellgroup 1 elements and traces, looks like everything works — hcarson / detail
  376. unit test involving reattaching a cell group 1 boundary element — hcarson / detail
  377. Adding RK Riemann Problem — eam5515 / detail
  378. Added detection for transition front that occurs at element interfaces. — shunz / detail
  379. Various fixes to get NS GLS working in 3D — galbramc / detail
  380. Updated pyrite files for nightly testing — galbramc / detail
  381. Set longer timeout for specific long running unit tests — galbramc / detail
  382. caught the memory leak, and a bunch of instantiations and fixes and unit tests etc — hcarson / detail
  383. forgot a thing — hcarson / detail
  384. style check — hcarson / detail
  385. Added promote_Surreal for ParamTuple — galbramc / detail
  386. fixes: — hcarson / detail
  387. file renaming switches — hcarson / detail
  388. forgot to remove print out. — hcarson / detail
  389. added catch for ghost boundaries — hcarson / detail
  390. forgot file write — hcarson / detail
  391. missed a thing — hcarson / detail
  392. Don't do parallel solves yet with the new ElementDualLocal solves — galbramc / detail
  393. Added TimeOut BC for spacetime that is distinct from BCNone — blsc / detail
  394. some 4d stuff — pcaplan / detail
  395. placeholders for unit tests — pcaplan / detail
  396. Start working on latest AFLR4 — galbramc / detail
  397. Many cppcheck fixes, but not all — galbramc / detail
  398. Fixed compile error — galbramc / detail
  399. caught a ghost boundary bug, now have different bugs in parallel — hcarson / detail
  400. More work on latest AFLR4, does not work yet — galbramc / detail
  401. Updated Partiioning for CG element dual solves — galbramc / detail
  402. Relaxed tolerances on local solves — galbramc / detail
  403. Nightly fixes — galbramc / detail
  404. Upgraded PETSc version — galbramc / detail
  405. Fixed PETSc version test — galbramc / detail
  406. changed to allow Real indices for monomial — hcarson / detail
  407. added ghost tests, turned off the split ghost tests, as we don't have a large enough grid that group 0 has no frozen dofs — hcarson / detail
  408. Many AFLR4 updates — galbramc / detail
  409. changed some comments — hcarson / detail
  410. vim put some actual tabs in... and changing some odd pieces — hcarson / detail
  411. Another try — galbramc / detail
  412. warning about unset data — hcarson / detail
  413. Added 1D AR test file — ursachi / detail
  414. relaxing tolerance — hcarson / detail
  415. trace to cell reference coordinates (plus matlab script), grundmann-moeller quadrature unit tests — pcaplan / detail
  416. trace to cell reference coordinates (plus matlab script), grundmann-moeller quadrature unit tests — pcaplan / detail
  417. Added a tecplot dump for EGTessModel — galbramc / detail
  418. element topology tracks number of permutations so possible trace orientations is correct — pcaplan / detail
  419. More debugging outputs — galbramc / detail
  420. Fixes so boost xml files are correctly dumped — galbramc / detail
  421. Fixed system tests for coverage — galbramc / detail
  422. Allowed for longer run times on specific tests — galbramc / detail
  423. One more tweak for coverage of system tests — galbramc / detail
  424. Typo — galbramc / detail
  425. Missed one more — galbramc / detail
  426. Forgot to add files — galbramc / detail
  427. One more typo — galbramc / detail
  428. A slightly different version — galbramc / detail
  429. Minor fix — galbramc / detail
  430. Fixed find and replace mistake — galbramc / detail
  431. fixed a few bugs with trace-to-cell ref coordinates — pcaplan / detail
  432. hasFluxConservative is noe hasFluxAdvectiveTime — blsc / detail
  433. xfield and element definitions for pentatopes — pcaplan / detail
  434. spacetime field and element files — pcaplan / detail
  435. tolerance — hcarson / detail
  436. relaxed again — hcarson / detail
  437. field and xfield instantiations in 4d — pcaplan / detail
  438. map between quadrature points of different trace orienations (in 4d) check for minimum distance — pcaplan / detail
  439. lingering space — pcaplan / detail
  440. unused variables...dont worry i'll unit test these functions — pcaplan / detail
  441. uninit fixes — pcaplan / detail
  442. 2D Riemann problem now uses surrogates — blsc / detail
  443. A box grid with two ghost boundaries — hcarson / detail
  444. added split tests with ghost boundaries attached to cell group 1, and made the assert message for cell group 0 a bit more obvious — hcarson / detail
  445. duplicate test name — hcarson / detail
  446. Fixes to EGADS loop senses when sense is +/-2 — galbramc / detail
  447. Forgot a file — galbramc / detail
  448. Fixed array out-of-bounds in Pentatope basis function. Fixed memcheck for nightly testing. — galbramc / detail
  449. Speed improvement for stabilized CG. 3DNS isothermal wall BC. Many other small fixes — galbramc / detail
  450. More robust jacobian check for CG Stabilized NS — galbramc / detail
  451. changed DOF sharing calculations to correctly use max, and to calculate the 3D sharing, assuming a regular icosahedron about a point — hcarson / detail
  452. Relaxed tolerance — galbramc / detail
  453. Fixed adjoint order error — ursachi / detail
  454. Check if error estimates are the same after several iterations — ursachi / detail
  455. 2D DGAdv error estimate order test — ursachi / detail
  456. moved the hard work split method into the common instantiation — hcarson / detail
  457. fixing up the 3D logic a little bit, the edge local still works, need to test the element dual now — hcarson / detail
  458. unsplit element dual tests — hcarson / detail
  459. Fixed warnings — galbramc / detail
  460. first, extremely basic split test — hcarson / detail
  461. another simple split test, now with reattaching boundary groups attached to cell group 1 — hcarson / detail
  462. duplicate named tests — hcarson / detail
  463. some tests for ElementDual Solution transfer, no surprises — hcarson / detail
  464. duplicate test names — hcarson / detail
  465. Reworkd DOF sync so Newton syncs zombies. Linear solver timings — galbramc / detail
  466. Missed one — galbramc / detail
  467. Forgot to add timing variable for MKL_PARDISO — galbramc / detail
  468. Copy pasta — galbramc / detail
  469. added scaling and offest to TripleBL and changed naming convention to match between 2D and 3D — hcarson / detail
  470. forgot the pattern update — hcarson / detail
  471. New parallel unit tests. Ghost/Zombie DOFs synced in Newton. PETSc build in external. Many small fixes. — galbramc / detail
  472. various changes to get 3D adapting — hcarson / detail
  473. a 3D CG adaptation! — hcarson / detail
  474. changes to 3D case to run on hypersonic — hcarson / detail
  475. Missing include — galbramc / detail
  476. to run a big case — hcarson / detail
  477. Updates for latest AFLR patches — galbramc / detail
  478. Custom build of gcc 8.2 — galbramc / detail
  479. Jenkims env fix for gcc8 — galbramc / detail
  480. Adding new RK unit test — eam5515 / detail
  481. Adding Complete RK unit test and new CMake list — eam5515 / detail
  482. AFLR4 now works. Need new library release. — galbramc / detail
  483. Cleanup RK Parallel Serial test. Have not found the bug yet. — galbramc / detail
  484. Fixes so RK works with new parallel paritioning — galbramc / detail
  485. Assert Galerkin Stabilized PDE fluxViscousLinearInGradient. Add CMake option VERA_ERROR. — galbramc / detail
  486. commiting a bunch of non-working tests and the 3D CG case. — hcarson / detail
  487. More updates for AFLR4 — galbramc / detail
  488. CG Field constructor minor speed improvements. Nightly tolerances. — galbramc / detail
  489. refactor to remove additional unneeded fields, should reduce the constructor destructor costs associated with ErrorEstimate — hcarson / detail
  490. Improved the speed of CG Field constructors. Should help local solves. — galbramc / detail
  491. Minor fixes — galbramc / detail
  492. Upgraded cppcheck on reynolds — galbramc / detail
  493. A few more minor speed improvements to Galerkin error estimates. — galbramc / detail
  494. xfielddomain fixes for avro api changes — pcaplan / detail
  495. unit test fixes for avro changes — pcaplan / detail
  496. some unit testing on polytopes — pcaplan / detail
  497. push to mac for IMR — pcaplan / detail
  498. Fixed bug when parallelizing nodal metrics — galbramc / detail
  499. Fix for MultiScale metric — galbramc / detail
  500. moved integrand construction outside of loops for speed — hcarson / detail
  501. caught bug with assignment rather than accumulation — hcarson / detail
  502. that speed up didn't work.... — hcarson / detail
  503. added get options for orientation, and caught bug with invalid split group 1 — hcarson / detail
  504. added a check to see if element is owned by local processor — hcarson / detail
  505. unused variable — hcarson / detail
  506. Suppress cppcheck — galbramc / detail
  507. another unit test — hcarson / detail
  508. Added requested element print out. Fixed int for computing cost. — galbramc / detail
  509. some more unit tests and caught a bug — hcarson / detail
  510. Better CG load balancing. PETSc BAIJ works for processors with no DOF possessions — galbramc / detail
  511. Fix for error estimate nodal outputField — galbramc / detail
  512. added dictionary options for SineSineSine — hcarson / detail
  513. hunting some int casts — hcarson / detail
  514. bumping that coverage up — hcarson / detail
  515. 3D Element Dual test — hcarson / detail
  516. Updated printout format — shunz / detail
  517. tweak — hcarson / detail
  518. Added mach output functional for DeltaWing — galbramc / detail
  519. Started to rework cmake folder test names — galbramc / detail
  520. forgot a dictionary — hcarson / detail
  521. Added mach field dump for MOESS delta wing — galbramc / detail
  522. New folder test names. We can revert/modify if they are awkward — galbramc / detail
  523. Missed XDIR related things — galbramc / detail
  524. dictionary fixes and parameter tweaks — hcarson / detail
  525. more dictionary fixes — hcarson / detail
  526. Periodic boundary support for gmsh reader — blsc / detail
  527. reduced test size — hcarson / detail
  528. Updates so refine might work in parallel — galbramc / detail
  529. Updated refine check with cmake — galbramc / detail
  530. shortened test again... — hcarson / detail
  531. Fixes for DeltaWing to dump mach field — galbramc / detail
  532. Removed deformationTime.dat — galbramc / detail
  533. PETSc uses x as initial guess. Use P-Adjoint as initial P+1-Adjoing with Galerkin. Other cleanups. — galbramc / detail
  534. Clean up adjoint solve for DeltaWing — galbramc / detail
  535. Don't run refine in parallel yet — galbramc / detail
  536. changing to unstabilized for testing — hcarson / detail
  537. tweaks and removing an unintended file — hcarson / detail
  538. basic scheduler and timing dumps at the end of test adapthist — hcarson / detail
  539. Periodic gmsh fix for parallel — blsc / detail
  540. moving box — hcarson / detail
  541. mend — hcarson / detail
  542. moving box — hcarson / detail
  543. forgot to allow PETSC — hcarson / detail
  544. JacobianFunctionalCell_Galerkin now works in parallel. Other small fixes. — galbramc / detail
  545. Started a new test case — shunz / detail
  546. changed to copy construction — hcarson / detail
  547. Exposed Netwon iterations of free-transition solve — shunz / detail
  548. Missed a solution initialization for PETSc — galbramc / detail
  549. Added parallel interfac to XField_Lagrange. — galbramc / detail
  550. Updated XField3D_refine so it hopefully works in parallel — galbramc / detail
  551. Nested forced-transition solve within nonlinear solution of free-transition problem — shunz / detail
  552. work towards calling avro from parallel SANS — pcaplan / detail
  553. Added a patch to the corner case where transition happens at an element interface — shunz / detail
  554. refine API now works in parallel — galbramc / detail
  555. Don't allocate P and P+1 jacobian at the same time for Galerkin — galbramc / detail
  556. Forgot some files — galbramc / detail
  557. Various fixes — galbramc / detail
  558. More informative error messages — galbramc / detail
  559. One more fix for parallel grid creation — galbramc / detail
  560. Typo — galbramc / detail
  561. More robust EPIC call interface. Improved refine build. — galbramc / detail
  562. Fixed a bug in transition location identification within cells — shunz / detail
  563. Fixed memory leak — galbramc / detail
  564. More robust system call to refine — galbramc / detail
  565. might Edge local work? — hcarson / detail
  566. running a 3D CG adapt in parallel! — hcarson / detail
  567. forgot to actually use the scheduler — hcarson / detail
  568. Precondition adjoint P+1 solve with adjoint P solve for DGBR2 — galbramc / detail
  569. Forgot some files — galbramc / detail
  570. Wroking on L2 projections. Various fixes — galbramc / detail
  571. Fixes for L2 projection cases — galbramc / detail
  572. Typo — galbramc / detail
  573. added a targetCost scheduler — hcarson / detail
  574. unused variable and style fixes — hcarson / detail
  575. maintain same list of lower-dim egads entities for parallel — pcaplan / detail
  576. avro interface for delta wing case — pcaplan / detail
  577. Minor cleanup — galbramc / detail
  578. Fixes for running avro in parallel — galbramc / detail
  579. merge conflict — pcaplan / detail
  580. boundary conditions in the correct order... — pcaplan / detail
  581. xfielddomain constructor when sans_avro not defined, warning fixes — pcaplan / detail
  582. lingering comma — pcaplan / detail
  583. forgot to comment some testing things that dont work — pcaplan / detail
  584. Various fixes to refine. L2 CG projection works in parallel — galbramc / detail
  585. Fixes for refine. L2 cases to run for paper. — galbramc / detail
  586. Fixed warnings — galbramc / detail
  587. Using DirectLU for DeltaWing adjoint — galbramc / detail
  588. mods to avro interface, added Curved parameter to omit visiblity checks on geometry — pcaplan / detail
  589. Various fixes to refine interface and AD L2 cases. — galbramc / detail
  590. Added mlarocca@mit.edu to DeveloperEmailAddresses — mlarocca / detail
  591. Revived UniField IBL.  Verified system test on laminarAirfoil+turbulentWake coupled solution case — shunz / detail
  592. Updated pyrite file.  Also revived and verified intra-cell forced transition case of UniField IBL — shunz / detail
  593. Minor cleanup — shunz / detail
  594. Commited: ready to run UniField IBL intra-cell forced transition in mass — shunz / detail
  595. Committed in order to run grid refinement in sweep of duplicate-field IBL intra-cell forced transition.  IO files to be cleaned up later — shunz / detail
  596. Updates for latest fefloa — galbramc / detail
  597. Fixed a bug in grid convergence running script — shunz / detail
  598. lagrange basis function on pentatopes with unit tests — pcaplan / detail
  599. change to avro interface — pcaplan / detail
  600. All kinds of fixes — galbramc / detail
  601. Added a finer grid test case — shunz / detail
  602. 4d instantiations, still undefined refs with field & element associativity & some matrix stuff... — pcaplan / detail
  603. Fixed warnings/errors — galbramc / detail
  604. un-instantiated so i can test some things, previous push had wrong include — pcaplan / detail
  605. Solver interface unit tests — ursachi / detail
  606. Solver interface unit test for DGBR2 — ursachi / detail
  607. getting final things off of devastator — hcarson / detail
  608. premerge — pcaplan / detail
  609. missing instantiations, fixing a few undef references — pcaplan / detail
  610. Relaxed tolerance — galbramc / detail
  611. Unified robuster system call function — galbramc / detail
  612. Fix mistakes I made related to label in XFieldDomain — galbramc / detail
  613. Fixed analyzer warnings — galbramc / detail
  614. prelim kuhn-freudenthal triangulation via avro — pcaplan / detail
  615. Upgraded builds to latest NLOPT and PETSc. — galbramc / detail
  616. Corrected comments, added filesysteming. — cfrontin / detail
  617. lagrange DOF map & trace2cellrefcoord + unit tests — pcaplan / detail
  618. Added some 4D stuff and some comments to help clarify things as I come back to them. — cfrontin / detail
  619. lagrange dof map testing — pcaplan / detail
  620. Fixes for latest AFLR — galbramc / detail
  621. Updates for L2 projection cases — galbramc / detail
  622. Indexing bug — galbramc / detail
  623. re-order lattice coordinates so we have canonical vertices first — pcaplan / detail
  624. moved eigenvalue calculation to impl + unit tests for 4x4 — pcaplan / detail
  625. spacetime element associativity + unit tests — pcaplan / detail
  626. Added Triple BL to the MultiScale test — galbramc / detail
  627. normal of tet in 4d via svd — pcaplan / detail
  628. finish implementation of tet normal in 4d — pcaplan / detail
  629. elementxfieldspacetime jacobian + volume + unit tests — pcaplan / detail
  630. constructed a 4d xfield! — pcaplan / detail
  631. wrap kuhn freudenthal triangulation around SANS_AVRO ifdef — pcaplan / detail
  632. still cant remember how to trigger dummy commit... — pcaplan / detail
  633. and again... — pcaplan / detail
  634. trailing whitespace — pcaplan / detail
  635. Tweak to refine build — galbramc / detail
  636. Bumped up timing more for Hex Lagrange Cache test — galbramc / detail
  637. Fixed missing feenableexcept on MacOS, thus enabling us to turn on USE_TRAP_FP in ccmake in order to catch NaNs in runtime. — shunz / detail
  638. Added L2 Projection solver interface — galbramc / detail
  639. Galerkin TripleBoundaryLayer case using MultiScale metric — hcarson / detail
  640. git jenkins not working...dummy commit — pcaplan / detail
  641. Added CG for L2Projection — galbramc / detail
  642. added boundary functional and mathematica notebook for computing exact solutions — hcarson / detail
  643. removing unworking test from repo — hcarson / detail
  644. changed default to 1.0 for Frob constraint — hcarson / detail
  645. added scale and offset to 1D BL — hcarson / detail
  646. Missing include — galbramc / detail
  647. change case — pcaplan / detail
  648. element ridge (TopoDim-2 elements) needed to construct 4d elems — pcaplan / detail
  649. xfielddomain holds ego children not SANS::EGObject, reason is because tesseract geometry entities are not technically ego's though avro does define a unique ego for each entity — pcaplan / detail
  650. instantiations for 4d target metric matching — pcaplan / detail
  651. CG field construction for TopoD4 meshes, tested on p=1 — pcaplan / detail
  652. target metric matching in 4d sandbox — pcaplan / detail
  653. Refactored projection to Qauxi_IBL by unifying implementations for DuplicateField and UniField IBL — shunz / detail
  654. element ridge unit test + equilateral pentatope jacobian — pcaplan / detail
  655. fixed bug with equilateral pentatope jacobian + matlab script + unit test on implied metric — pcaplan / detail
  656. added a boundary output for the triple BL, various clean ups, reverting to 0.25 for the default param — hcarson / detail
  657. Refactored UniField IBL variable interpreter.  More work needed to propagate to everywhere oc the code base. — shunz / detail
  658. Minor refactoring.  Updated pyrite file. — shunz / detail
  659. Refactoring.  Realizing that using ctau is fragile since log(ctau) is frequently needed to compute n_tilde but ctau can undershoot through below zero. — shunz / detail
  660. Refactored UniField variable/eqns to use nt as a conservative quantity — shunz / detail
  661. Restored panel method unit test — shunz / detail
  662. Tweaked iteration limit to wait until convergence — shunz / detail
  663. Refactored constructors of IBL PDE and fluid models.  Started PDEIBLUniField unit test.  Other minor refactoring — shunz / detail
  664. Added 2D+T AD case, in progress, with assorted necessary changes. Still needs BC fix. Also added framework for 4D single pentatope unit grid. Should hopefully also include all necessary unit testing, as mapped from similar 1D cases to cases of interest. — cfrontin / detail
  665. Fix typo — galbramc / detail
  666. field element pentatope tests — pcaplan / detail
  667. debugging costmodel_logeuclidean on topoD4 ping tests — pcaplan / detail
  668. brace alignment — pcaplan / detail
  669. uncomment xfieldspacetime_pentatope tests until actually implemented — pcaplan / detail
  670. unused defs — pcaplan / detail
  671. undefined references without avro — pcaplan / detail
  672. sign compare — pcaplan / detail
  673. missing file to compile — pcaplan / detail
  674. lingering comma — pcaplan / detail
  675. ridge -> frame — pcaplan / detail
  676. undef references — pcaplan / detail
  677. commit deleted files — pcaplan / detail
  678. wrap ifdef SANS_AVRO further ahead — pcaplan / detail
  679. omit spacetime pentatope btest from memcheck because it takes a long time, bump up timeout for it as well — pcaplan / detail
  680. instantiate matrixsyms4 projection for tets — pcaplan / detail
  681. basis function instantiate — pcaplan / detail
  682. matmul instantiation — pcaplan / detail
  683. reduced number of orientations to make elementspacetime_pentatope test go faster — pcaplan / detail
  684. Remove maybe uninitialized wanrings on gnu 8 — galbramc / detail
  685. last instantiation i promise — pcaplan / detail
  686. bug in cost model log-euclidean test because of the vertex/step matrix ordering — pcaplan / detail
  687. seriously this has to be the last one — pcaplan / detail
  688. last one! — pcaplan / detail
  689. trigger commit — pcaplan / detail
  690. up to p=2 for element space time test because it's really slow — pcaplan / detail
  691. Revamped Qauxv/parameters API. — shunz / detail
  692. Fixed typos — shunz / detail
  693. Propagated more changes in IBL parameter API.  Verified coupled IBL UniFIeld forced laminar case. — shunz / detail
  694. Fixed more tests related to IBL parameter API — shunz / detail
  695. Update test/system/AnalyticSolve/AnalyticSolve2D_DGAdvective_IBL_StagnationFlow_SingleElem_LamiBL_btest.cpp — shunz / detail
  696. Verified two system tests with PDEIBL2D using LF flux. — shunz / detail
  697. Fixed uncoupled IBL HDG case — shunz / detail
  698. 2D+T is running, working towards validation. — cfrontin / detail
  699. Added json parser to PyDict — galbramc / detail
  700. Fixed formatting from vera++. Also reformulated 2D+T case for convergence investigation. — cfrontin / detail
  701. switched from pure adv to AD for hypersonic. — cfrontin / detail
  702. 2D+T AD ST toy fix; need unit tests for BCAD2D.h — cfrontin / detail
  703. Fixed bugs in PDEIBLUniField — shunz / detail
  704. Lots of refactoring of AFLR4 and sansLIPAIM. All seems to be functioning. — galbramc / detail
  705. Minor fix — galbramc / detail
  706. Tweak to how AFLR is found — galbramc / detail
  707. Fixed compile error — galbramc / detail
  708. Update minimum boost version to 1.50 due to bug in property_tree json reader. — galbramc / detail
  709. Merged AFLR4 test into EGTessModel — galbramc / detail
  710. Fixed flux feedthrough for 2D+T AD. — cfrontin / detail
  711. More extensive try with sansLIPAIM — galbramc / detail
  712. Most sansLIP updates — galbramc / detail
  713. Fix MKL_PARDISO for transpose solves. Bug fix for AFLR3 — galbramc / detail
  714. Use static MKL libraries due to python issues — galbramc / detail
  715. Don't statically link in the ld library — galbramc / detail
  716. Increased timout time for HDG test — galbramc / detail
  717. Realzed timing on another test — galbramc / detail
  718. Refactored UniField IBL and ran it for forced and free transition problems — shunz / detail
  719. Played captured transition (forced and free) — shunz / detail
  720. Updated initial solution guesses for reformulated captured transition IBL — shunz / detail
  721. Unified system test on the case of uncoupled IBL laminar BL on airfoil — shunz / detail
  722. Refactored IBL numerical fluxes — shunz / detail
  723. Updated pyrite files for coupled coupled IBL cases with laminarBL+turbulentWake — shunz / detail
  724. Moved 2D+T convergence to Solve3D, made Adapt3D version adapt. — cfrontin / detail
  725. Typo fix. — cfrontin / detail
  726. Ran and added pyrite files for captured forced transition without using cut-cell machinery — shunz / detail
  727. push to hypersonic — pcaplan / detail
  728. Verified reasonable agreement between natural transition solution of UniField IBL using cut-cell against that using plain DG without cut-cell — shunz / detail
  729. Added recent-5 to Adapt3D 2D+T AD — cfrontin / detail
  730. Added MKL instantiation — shunz / detail
  731. Separate list of MKL static libraries — galbramc / detail
  732. Always link in MKL statically with sansLIPAIM — galbramc / detail
  733. Moved error message for sansLIP — galbramc / detail
  734. Building mpi all_reduce into FunctionalCell_Galerkin — galbramc / detail
  735. Added missing includes — galbramc / detail
  736. Minor edits — shunz / detail
  737. Changed default numerical flux — shunz / detail
  738. Added pyrite files for fitted transition of forced cases — shunz / detail
  739. Removed redundant cases — shunz / detail
  740. Minor updates — shunz / detail
  741. Added an alternative turbulent onset ctau value — shunz / detail
  742. Updates before running grid convergence on fitted transition — shunz / detail
  743. fixed a bug in PDEIBL source.  other minor fixes — shunz / detail
  744. Updated pyrtied files to fix the bug in PDEIBL lag source term introduced on 2018/11/02 in commit 9625612 — shunz / detail
  745. Tweaked a default setting for system test pyrite checks — shunz / detail
  746. Cleaned up system tests — shunz / detail
  747. Fixed free-forced nested solver logic for transition at element interface — shunz / detail
  748. Updated and cleaned up pyrite files — shunz / detail
  749. Updated an initial solution file for flow transition system tests — shunz / detail
  750. Renaming — shunz / detail
  751. minor updates — shunz / detail
  752. Added a to-do — shunz / detail
  753. added to-do — shunz / detail
  754. Refactored two system tests.  Added options to change transition model parameters on the fly — shunz / detail
  755. Fixed a bug/feature in an unimportant if statement — shunz / detail
  756. Cleanup — shunz / detail
  757. Cleaned up deprecated parts.  Fixed LF flux.  Refactored transition front source/flux.  Editted printout — shunz / detail
  758. Fixed uninitialized data in Flux_mitState_Nitsche for pure advective. — galbramc / detail
  759. Updated pyrite file after updating PDEIBL LFflux related stuff — shunz / detail
  760. Removed variable length arrays — galbramc / detail
  761. Replaced turbulent BL TS wave growth rate with the previous formulation of interpolating over turbulent sub-element, which makes cd vs ntcrit relation smooth.  Updated pyrite files for free transition — shunz / detail
  762. Minor refactoring — shunz / detail
  763. Fixed LFflux for IBLUniField.  Refactored test case and updated pyrite file — shunz / detail
  764. Missed a few variable length arrays — galbramc / detail
  765. One more warning — galbramc / detail
  766. Refactored PDEIBLUniField member field to allow for parameter ntcrit sweep.  Updated initial solution guess to be based on an existing IBL solution. — shunz / detail
  767. Fixed warnings — galbramc / detail
  768. Better cleanup of coverage information — galbramc / detail
  769. Don't build sandbox with nightly — galbramc / detail
  770. Clang analyzer should still build sandbox — galbramc / detail
  771. Revived gradation penalty. Needs lots of tweaks and studying — galbramc / detail
  772. Added unit test for 2D+T implementations. — cfrontin / detail
  773. Working on pentatope tests. — cfrontin / detail
  774. Changed scaling factor for objective — ursachi / detail
  775. Added 1D and 2D includes — ursachi / detail
  776. Updates for latest version of AFLR — galbramc / detail
  777. Gradation still needs more work... — galbramc / detail
  778. Fix compiler error — galbramc / detail
  779. Fixed arry bound typo in test — galbramc / detail
  780. more tests for orientations of tets in 4d — pcaplan / detail
  781. lingering changes — pcaplan / detail
  782. DG fields in 4d + unit tests — pcaplan / detail
  783. silly typo — pcaplan / detail
  784. can only use KF triangulation if avro is hooked in — pcaplan / detail
  785. Working on unit grids... — cfrontin / detail
  786. Another formatting fix. — cfrontin / detail
  787. Another formatting fix. — cfrontin / detail
  788. minor editting — shunz / detail
  789. Fix includes. — cfrontin / detail
  790. pre merge — hcarson / detail
  791. Taking the warning machete to things. — cfrontin / detail
  792. Refactored test case input — shunz / detail
  793. Udpates to sansLIPAIM to work with new CAPS dataTransfer setup — galbramc / detail
  794. system test for DG with pentatopes — pcaplan / detail
  795. Minor update — shunz / detail
  796. Added an option of wake ctau_eq but not used — shunz / detail
  797. moving to hyper branch — hcarson / detail
  798. use SANS convention for trace orientation instead of the one used in avro — pcaplan / detail
  799. 1Ptope test working, fixed assumptions on nodal definitions. — cfrontin / detail
  800. 2Tope unitgrid working, testcase working. — cfrontin / detail
  801. Turned off tesseract for push. — cfrontin / detail
  802. Light LIP tecplot files — galbramc / detail
  803. Smaller tecplot file for LIP — galbramc / detail
  804. Fix scoping issues. — cfrontin / detail
  805. Fixed warnings — galbramc / detail
  806. Added comment with origin of SVD3 algorithm — galbramc / detail
  807. handmade unit grid: 1 pentatope with 5 pentatope neighbours — pcaplan / detail
  808. allow all orientations of traces (1 to 12) in checkGrid — pcaplan / detail
  809. local grid extraction for pentatopes — pcaplan / detail
  810. cell to trace connectivity for pentatopes — pcaplan / detail
  811. finish implementation of element associativity of pentatopes — pcaplan / detail
  812. unit tests for local grid extraction around pentatopes (single pentatope and single pentatope surrounded by neighbours) — pcaplan / detail
  813. other minor changes — pcaplan / detail
  814. comm rank = 0 using xfield_lagrange — pcaplan / detail
  815. 24Ptope working, passing checkGrids(). test in progress. — cfrontin / detail
  816. remove duplicate unit grids in favour of handmade ones — pcaplan / detail
  817. warning fix — pcaplan / detail
  818. warning fix — pcaplan / detail
  819. 24Ptope unit grid working, tested and working. — cfrontin / detail
  820. Add duration to each build in Jenkins email. — galbramc / detail
  821. tweaks and removed a bunch of heap memory allocations — hcarson / detail
  822. added options to the quadratic — hcarson / detail
  823. mods for running with avro — hcarson / detail
  824. comment typos — hcarson / detail
  825. switching over to avro — hcarson / detail
  826. Reworked build of parmetis. refine uses parmetis. added avro build. — galbramc / detail
  827. Fixes for avro and refine — galbramc / detail
  828. Suppress warning — galbramc / detail
  829. Parallel Field4D test fixes. Give refine more time. — galbramc / detail
  830. Relaxed tolerance for intel — galbramc / detail
  831. Don't run ErrorOrder_4D in parallel — galbramc / detail
  832. Updated refine build — galbramc / detail
  833. Updated refine check — galbramc / detail
  834. Nightly build fixes... plus a stopgap ifdef until the SVDless 4D normal vector is done. — cfrontin / detail
  835. Reduce run time of 4D error order check — galbramc / detail
  836. Relaxed another tolerance — galbramc / detail
  837. Remove files written by avro — galbramc / detail
  838. Dissable refine testing for now — galbramc / detail
  839. Added memcheck to parmetis build — galbramc / detail
  840. Ignore external parmetis — galbramc / detail
  841. changing branch — hcarson / detail
  842. Generalized valgrind suppression — galbramc / detail
  843. egads coords must have 3 dimensions even in 2d — pcaplan / detail
  844. Suppressed CMakeLists errors. [TBD] — shunz / detail
  845. Fixed panel metod tests — shunz / detail
  846. AFLR4 updates and some Jenkins scripts — galbramc / detail
  847. Link tetgen before avro — galbramc / detail
  848. instantation of elementlocal version of local splits for 4d...unit test will fail because the result is different than savi's convention — pcaplan / detail
  849. missing definitions for elementlocal & edgelocal — pcaplan / detail
  850. some instantiations of savi's method for doing local splits — pcaplan / detail
  851. xfield_lagrange method of doing local splits...still debugging...will fix later... — pcaplan / detail
  852. Refactoring.  Patched unit tests — shunz / detail
  853. More unit tests — shunz / detail
  854. added unit tests — shunz / detail
  855. Fixed unit tests — shunz / detail
  856. Fixed IBL unit tests — shunz / detail
  857. Added unit test.  Turned off unused methods. — shunz / detail
  858. Fixed a bug in CMakeLists: use of out-of-scope variable — shunz / detail
  859. Fixed a bug in cmake files that only appear when building with Xcode — shunz / detail
  860. Refactored ping test input array type.  Fixed IBL-related 4x4 block system ping tests.  Added missing MPI-related method definitions for pure virtural methods — shunz / detail
  861. Relocated code into SANS_MPI macros; otherwise, errors are raised about "member access to incomplete type" — shunz / detail
  862. Verified/fixed/cleaned IBL system tests with transition (full upwind). — shunz / detail
  863. Fixed duplicate naming of boost test suite — shunz / detail
  864. Relaxed pyrite tolerance — shunz / detail
  865. Updated forced-transition pyrite files after the bug fix in commit b30121ee5531d91e84aac94fbdab6462f458f4f8 — shunz / detail
  866. Turned off file dump — shunz / detail
  867. Fixed formatting — shunz / detail
  868. Fixed empty traling line — shunz / detail
  869. Fixed DG and HDG AES tests for uncoupled IBL — shunz / detail
  870. Fixed formatting — shunz / detail
  871. Reverted changes to (viscous) HDG stuff: those abandoned changes treated qfld and afld as a single bundle field — shunz / detail
  872. Update AlgebraicEquationSet_HDGAdvective_Advection_btest.cpp — shunz / detail
  873. Fixed one more test affected by ping test refactoring.  Fixed formatting and screen output — shunz / detail
  874. Fixed another system test affected by IBL Qauxv interpreter refactoring — shunz / detail
  875. Update ErrorOrder_1D_HDGAdvective_Advection_btest.cpp — shunz / detail
  876. Fixed warning and missing instantiation — shunz / detail
  877. Added an instantiation just for completeness, although it is no longer used — shunz / detail
  878. Cleaned sandbox cases — shunz / detail
  879. relaxed tolerances for clang_release — shunz / detail
  880. Suppressed output — shunz / detail
  881. Fixed bugs in CMakeLists — shunz / detail
  882. Fixed HDG advection tests — shunz / detail
  883. Removed the pure advection test case using (viscous) HDG machinery — shunz / detail
  884. Refactored halving line search and fixed unit tests — shunz / detail
  885. Fixed memory errors — shunz / detail
  886. Relaxed tolerance for intel — shunz / detail
  887. relaxed tolerances for intel18 — shunz / detail
  888. Relaxed timeout limits — shunz / detail
  889. Speed up unit tests in response to Jenkins timeout — shunz / detail
  890. Fixed typo — shunz / detail
  891. Relaxed tolerance for gnu48 — shunz / detail
  892. Tried to fix timeout on Jenkins testing (coverage_clang reynolds) — shunz / detail
  893. Reverted CMakeLists to see if TIMEOUT is set properly this time on Jenkins — shunz / detail
  894. minor refactoring — shunz / detail
  895. Refactored CMakeLists for Xcode build — shunz / detail
  896. Refactored Newton solver — shunz / detail
  897. Minor fix — shunz / detail
  898. Fixed warnings — shunz / detail
  899. Added IBL max update fraction — shunz / detail
  900. Enabled under-relaxed Newton update for coupled 4x4 block system of IBL with free transition. — shunz / detail
  901. Refactor of avro XField interface — galbramc / detail
  902. Consistent logic for setting cmake testing timout property — galbramc / detail
  903. Fixed refine interface change — galbramc / detail
  904. Fix ifdef when not using avro — galbramc / detail
  905. More fixes to deal with avro — galbramc / detail
  906. Minor cleanup — galbramc / detail
  907. Added unit tests for IBL updateFraction — shunz / detail
  908. Upgrade PETSc — galbramc / detail
  909. More avro and PETSc tweaks — galbramc / detail
  910. I don't understand why dl library is needed to link a static library... — galbramc / detail
  911. Fix for refine check — galbramc / detail
  912. Suppress compiler warning when building PETSc — galbramc / detail
  913. Fix for avro with 4D — galbramc / detail
  914. Enable refine testing again — galbramc / detail
  915. Updated copyright date to 2019 — galbramc / detail
  916. Updated copyright date to 2019 — galbramc / detail
  917. dimension-independent local splits — pcaplan / detail
  918. timing tests show dim-independent implementation on par with savithru's impl...tried to debug hugh's local xfield in primal mode but something is wrong...unit tests on the way — pcaplan / detail
  919. reconciling merge conflicts and some tweaks — hcarson / detail
  920. license updates — hcarson / detail
  921. fixes to match avro — hcarson / detail
  922. forgot to add the avro defined precompile check — hcarson / detail
  923. relaxed tolerances and forgot to split world — hcarson / detail
  924. tweaking tol again... — hcarson / detail
  925. another tweak... — hcarson / detail
  926. cleanup of localpatch + commenting — pcaplan / detail
  927. copyright — pcaplan / detail
  928. more copyright — pcaplan / detail
  929. Updates for MOESS optimizations. Still needs more work. — galbramc / detail
  930. Instantiations for 4D AD solve. — galbramc / detail
  931. A few fixes — galbramc / detail
  932. Compile fixes — galbramc / detail
  933. More instantiations for 4D — galbramc / detail
  934. removed anachronistic definition of primal grid. Primal grid now matches the behavior of the normal DG grids. Unit tests have just been turned off in the meantime — hcarson / detail
  935. make sure mpi is init'd before calling rank by actually running in parallel — pcaplan / detail
  936. revert back to dual — pcaplan / detail
  937. ifdef SANS_AVRO for tests with CKF triangulation — pcaplan / detail
  938. changed to Dual in the system test — hcarson / detail
  939. attempted to fix nightly tests — shunz / detail
  940. Relaxed timings, fixed warning — galbramc / detail
  941. Updated pyrite files to fix nightly tests — shunz / detail
  942. Moved timing test into sandbox — galbramc / detail
  943. Cleanup of refine interface with auto memory management. — galbramc / detail
  944. Fix include — galbramc / detail
  945. added fix to 3D — hcarson / detail
  946. removed the separate 4D file, just added an instantiate at the end of 3D — hcarson / detail
  947. p=7 led to error close to machine zero, which seemed to cause touble to nightly ErrorOrder test.  Cut back p from 7 to 6 — shunz / detail
  948. p=6 still too high for pyrite test for ErrorOrder — shunz / detail
  949. Attempted to warning "use of zero-allocated memory" — shunz / detail
  950. Some cleanup in the sandbox. Added 2D L2Project adaptation — galbramc / detail
  951. Added tecplot dump for metric fields. Other small fixes — galbramc / detail
  952. Changed floor to round for generating new 1D mesh — ursachi / detail
  953. Minor refactoring — shunz / detail
  954. Compile fixes and more dependency warning suppressions — galbramc / detail
  955. Add dl library for avro — galbramc / detail
  956. Replaced nt transport equation with G variable as in SciTech paper, although the results are equivalent — shunz / detail
  957. Files for parallel periodic XField2D_Box_Triangle_Lagrange (Issues need to be fixed) — kug46 / detail
  958. Added a layer of abstractions when evaluating fluxes, sources etc. in IBL pde class — shunz / detail
  959. Fixed formatting... previously went under the radar since vera++ was not installed locally... — shunz / detail
  960. Added scalar and dot product fixes for MatrixSymS — galbramc / detail
  961. Enabled smooth laminar/turbulent blending — shunz / detail
  962. Fixed intel errors by relaxing tolerance and reconciling a missing pyrite file specialized for intel MKL — shunz / detail
  963. Updates for 2D L2 Projection sandbox test — galbramc / detail
  964. Updates for 1D L2 Projection sandbox test — galbramc / detail
  965. Added new trace free step matrix error model. Not enabled. — galbramc / detail
  966. Normalize MOESS optimization with nlopt — galbramc / detail
  967. Fixed undefined reference — galbramc / detail
  968. Fixed a bug in laminar/turbulent blending function — shunz / detail
  969. Added new MOESS optimization without global FrobNorm — galbramc / detail
  970. Forgot CMake file — galbramc / detail
  971. Small fix for cmake summary — galbramc / detail
  972. Weekly test fixes — galbramc / detail
  973. Modified AlgEqSet, IntegrandInteriorTrace and 2D DGAdvective toy for Parallel 2D Periodic Grids — kug46 / detail
  974. Towards parallel PETSc/TAO — galbramc / detail
  975. Refactored intermittency calculation — shunz / detail
  976. Generailized Projection to Qauxi to handle blended intermittency. — shunz / detail
  977. Some cleanup of logEuclidian cost — galbramc / detail
  978. Various small fixes — galbramc / detail
  979. Updated Embedding unit test for quadrature integration — galbramc / detail
  980. Reverted to binary intermittency as default — shunz / detail
  981. Relaxed tolerance for intel compiler.  Restored default to binary intermittency for existing tests — shunz / detail
  982. Relaxed torleranc for gnu48 — shunz / detail
  983. Added regularized point source to accommodate potential co-existence of free and forced transition in the captured transition treatment — shunz / detail
  984. Minor fix — galbramc / detail
  985. Fixes towards parallel+periodic — galbramc / detail

#232 (Jan 26, 2019, 1:52:10 AM)

  1. Added H tensor output from Euler2D — blsc / detail
  2. Working on new AFLR4 interface — galbramc / detail
  3. some tweaks — hcarson / detail
  4. tweaks — hcarson / detail
  5. Debugging AFLR4 — galbramc / detail
  6. removing erroneous refine things — hcarson / detail
  7. getting acdl develop CMakeIncludes — hcarson / detail
  8. more tweaks — hcarson / detail
  9. moving to hypersonic — hcarson / detail
  10. change to let MPI build the directories just in time — hcarson / detail
  11. too many white lines — hcarson / detail
  12. to run on devastator — hcarson / detail
  13. tweaks for hypersonic — hcarson / detail
  14. Nodal Error estimate. Takes the average of the attached nodes, the — hcarson / detail
  15. hacking about trying Nodal Estimation — hcarson / detail
  16. typo/bug maybe? — hcarson / detail
  17. another one — hcarson / detail
  18. pre merge — hcarson / detail
  19. Multiscale metric case, debugging printing a continuous Mach number — hcarson / detail
  20. pre merge — hcarson / detail
  21. forgot to assert the basis was the same for the two fields — hcarson / detail
  22. projects from the Dfld basis onto the Cfld basis so accumulating to the — hcarson / detail
  23. pre merge — hcarson / detail
  24. seems to write Mach number solbs now — hcarson / detail
  25. moving to hypersonic — hcarson / detail
  26. a fix to go to hypersonic — hcarson / detail
  27. weird tecplot bug — hcarson / detail
  28. compiles again, moving to devastator — hcarson / detail
  29. MultiScaleMetric for transfering to NASA — hcarson / detail
  30. moving to laptop — hcarson / detail
  31. transfering to Dev — hcarson / detail
  32. moving to devastator to get EPIC — hcarson / detail
  33. --ammend — hcarson / detail
  34. moving to devastator — hcarson / detail
  35. transfering to dev — hcarson / detail
  36. moving to hyper — hcarson / detail
  37. pre merge — hcarson / detail
  38. tweak — hcarson / detail
  39. added output dump info to MultiScaleMetric case, should be ready to — hcarson / detail
  40. making MultiScale and MOESS cases consistent and ready for hypersonic — hcarson / detail
  41. tweaks back to labbox — hcarson / detail
  42. Updates for edge based AFLR4 calculations — galbramc / detail
  43. Backwards facing step unit grid — hcarson / detail
  44. pre merge commit — hcarson / detail
  45. backwards step cases — hcarson / detail
  46. removed SolverInterface_Nodal_Galerkin, it ended up only a tiny tweak — hcarson / detail
  47. added options for tweaking order of the tau stabilization. Can force the — hcarson / detail
  48. added Arthur's version of Experimental, copied from his email — hcarson / detail
  49. preprocessor defined version with volume weighting, ought to remove this — hcarson / detail
  50. forgot the CMakeLists — hcarson / detail
  51. DG case updates — hcarson / detail
  52. nodal test passes again — hcarson / detail
  53. pre merge — hcarson / detail
  54. moving back to nia — hcarson / detail
  55. moving to dev — hcarson / detail
  56. tweaks to case — hcarson / detail
  57. Started a single-field IBL formulation — shunz / detail
  58. Bug fix — shunz / detail
  59. Added PDEIBL class in a single-field formulation — shunz / detail
  60. Fixed compiler errors — shunz / detail
  61. Completed UniField IBL uncoupled case of laminar BL over airfoil — shunz / detail
  62. Just file renaming — shunz / detail
  63. Coupled IBL UniField is working now.  No transition yet. — shunz / detail
  64. Fixed complier warnings and errors — shunz / detail
  65. Added a forced transition case for three-field IBL — shunz / detail
  66. Fixed compiler error — shunz / detail
  67. Refactored GalerkinWeightedIntegral for cut-cell transion IBL.  Started — shunz / detail
  68. Added UniField IBL cut-cell integrand class — shunz / detail
  69. minor edit — shunz / detail
  70. Intermediate commit: working on UniField IBL — shunz / detail
  71. Pruned some ping tests for speedup — shunz / detail
  72. pre merge — hcarson / detail
  73. moving to dev — hcarson / detail
  74. pre merge — hcarson / detail
  75. UniField IBL now working with cut-cell forced transition — shunz / detail
  76. Added a 4x4 system ping test for cut-cell UniField IBL forced transition — shunz / detail
  77. Added a 4x4 system ping test for cut-cell UniField IBL natural — shunz / detail
  78. Playing with natural transition cut-cell UniField IBL test case — shunz / detail
  79. added an argument for fixing the order used in the calculation of tau. — hcarson / detail
  80. mod solution fcn — arthuang / detail
  81. Minor cleanup before pushing to Jenkins — shunz / detail
  82. Fixed compilation error — shunz / detail
  83. Fixed point source term at transition (aka ctau fitting) — shunz / detail
  84. moving to dev — hcarson / detail
  85. moving to dev — hcarson / detail
  86. First converged case with cut-cell UniField IBL forced transition — shunz / detail
  87. 2D refine interface, it doesn't work yet — hcarson / detail
  88. hacks to move to NASA box — hcarson / detail
  89. Output primary unknowns (delta, A) before scaling — shunz / detail
  90. Fixed typo — shunz / detail
  91. Examined DG residual smoothness on p0 and p1 — shunz / detail
  92. Added a new transition front flux formulation that is consistent with DG — shunz / detail
  93. Added remarks — shunz / detail
  94. Renamed macro — shunz / detail
  95. Added a separate trace unit normal formulation for manifold interior — shunz / detail
  96. Refactored duplicate-field cut-cell IBL numerical flux at element — shunz / detail
  97. Replaced amplification factor growth rate term in turbulent BL regions — shunz / detail
  98. Minor edits — shunz / detail
  99. went back to nNodes for advective stabilization — arthuang / detail
  100. Removed IO files — shunz / detail
  101. minor edits — shunz / detail
  102. added comments — shunz / detail
  103. Updated printout — shunz / detail
  104. changed to all take order of stabilization as argument to stab — hcarson / detail
  105. Turned off one upwind flux advective method in Projection to Qauxi. — shunz / detail
  106. diff got lost in the merge, and a line too long — hcarson / detail
  107. forgot the refine preprocessor bits, and a curly brace was one space — hcarson / detail
  108. vera fixes — hcarson / detail
  109. forgot another one — hcarson / detail
  110. tweaks for jenkins — hcarson / detail
  111. curly braces again — hcarson / detail
  112. fixed coarsening node numbering bug, added a unit test to guard it — hcarson / detail
  113. forgot some things — hcarson / detail
  114. fixed warning about unread data — hcarson / detail
  115. modified stabilized output, reverted to node based advection — arthuang / detail
  116. sandbox, added high order quads to PX mesh reader, fixed periodic bug in — jzavala / detail
  117. Removed tabs from files in previous commit. — jzavala / detail
  118. stabilization consistent and passing unit tests. updated nitsche — arthuang / detail
  119. Fixed curly brackets formatting in previous commit's files. — jzavala / detail
  120. Minor cleanup — galbramc / detail
  121. Fixed continuous-param assumption for fluxViscous — blsc / detail
  122. Unit tests passing with param bug fix — blsc / detail
  123. Fixed a nightly warning — galbramc / detail
  124. 1D spacetime shock problems — blsc / detail
  125. Formatting errors — blsc / detail
  126. More bug fix — blsc / detail
  127. Adding hinge computation from CSM. Other minor cleanup. — galbramc / detail
  128. Intermediate commit: working DG cut-cell IBL of various formulations. — shunz / detail
  129. Revert "Merge branch 'threeFieldIBL' into shunz/develop" — shunz / detail
  130. Revert "Revert "Merge branch 'threeFieldIBL' into shunz/develop"" — shunz / detail
  131. Added a pure advection HDG system test — shunz / detail
  132. Refactored residual HDG to handle tuple of qfld and afld — shunz / detail
  133. Refactored HDG boundary trace residual and jacobian to handle tuple of — shunz / detail
  134. minor edits — shunz / detail
  135. testing with avro — pcaplan / detail
  136. Shouldn't have removed an include — shunz / detail
  137. Forward facing step unit grid and spacetime euler2d artificial viscosity — blsc / detail
  138. Turned off some debug output — blsc / detail
  139. PETSc option for spacetime forward facing step — blsc / detail
  140. Work towards Zombie DOFs — galbramc / detail
  141. Updates for LIP solver to use hinge lines — galbramc / detail
  142. Fixed inconsistency in LIPSolver sensitivity — galbramc / detail
  143. Fixed PETSc setup in step case — blsc / detail
  144. Unit test for forward facing step grid — blsc / detail
  145. New Euler BC unit tests — blsc / detail
  146. Fixed index bug for Zombies — galbramc / detail
  147. commenting and formatting — shunz / detail
  148. Tweak for building tetgen with MSYS — galbramc / detail
  149. Minor edits on existing established code — shunz / detail
  150. drafted interior trace integrand and residual for HDGAdvective — shunz / detail
  151. Added system call option for refine — galbramc / detail
  152. Maybe BDF case for forward facing step — blsc / detail
  153. Updates for calling refine with a system call — galbramc / detail
  154. Minor edit — shunz / detail
  155. Refactored/completed HDGAdvective interior trace machinery (integrand, — shunz / detail
  156. ResidualBoundaryTrace stuff compiling for HDGAdvective — shunz / detail
  157. More refine fixes — galbramc / detail
  158. One more refine fix. And some sansLIPAIM fixes. — galbramc / detail
  159. Missing include — galbramc / detail
  160. Correct missing include — galbramc / detail
  161. Minor fix — galbramc / detail
  162. Refactored interior trace machinery for HDGAdvective — shunz / detail
  163. HDGAdvective equation set compiiles now with residuals and jacobians — shunz / detail
  164. minor refactoring — shunz / detail
  165. Cleaned up HDGAdvective test case, and some other minor refactoring — shunz / detail
  166. Found and fixed a bug when conducting ping test: forgot to set — shunz / detail
  167. Bug fix in HDGAdvective boundary jacobian — shunz / detail
  168. Completed ping tests and ErrorOrder test for HDGAdvective (pure — shunz / detail
  169. Made the volume generator option for sansLIP. — galbramc / detail
  170. Default meshesr for sansLIP — galbramc / detail
  171. Added Lagrange-basis duct mesh creator and corresponding sandbox test — jzavala / detail
  172. minor refactoring — shunz / detail
  173. Added discretization tag template to HDGAdvective AES class — shunz / detail
  174. Generalized HDGAdvective interior trace integrand class — shunz / detail
  175. Got HDGAdvective cell and interior trace to compile — shunz / detail
  176. Refactored None BC for HDGAdvective — shunz / detail
  177. Working on a bug in sansLIPAIM — galbramc / detail
  178. Added ping test to HDGAdvective for uncoupled IBL on airfoil only — shunz / detail
  179. sansLIPAIM fix — galbramc / detail
  180. Fixed sansLIP data transfer with hinge bodies — galbramc / detail
  181. Use hacky isValidState checks for HDGAdvective:  not checking trace — shunz / detail
  182. Fixed formatting errors. — jzavala / detail
  183. HDGAdvective uncoupled IBL (with airfoil only) now works and matches DG — shunz / detail
  184. Fixed an include — shunz / detail
  185. moess to minimize distance between implied metric and target field — pcaplan / detail
  186. move to new branch — pcaplan / detail
  187. minor cleanup — shunz / detail
  188. a few (very simple) pentatope things — pcaplan / detail
  189. metric optimisation to match target metric — pcaplan / detail
  190. delete bad stuff — pcaplan / detail
  191. Fixed more formatting errors. — jzavala / detail
  192. Renamed duct mesh generator header and source files and edited — jzavala / detail
  193. testing with metric optimizer, will definitely fail jenkins — pcaplan / detail
  194. forgot to remove cmake add_subdir for my sandbox, will gitignore — pcaplan / detail
  195. vera fixes, missing file — pcaplan / detail
  196. try to fix invalid initializations — pcaplan / detail
  197. Cleanup.  Working on HDGAdvective hubtrace — shunz / detail
  198. Renamed the duct mesher file mentioned inside CMakeLists.txt — jzavala / detail
  199. Get coupled IBL to compile with HDGAdvective — shunz / detail
  200. removed the rfld dumping as it doesn't work in parallel — hcarson / detail
  201. changed monomial to accept reals, added a 1D L2Projection toy — hcarson / detail
  202. changed monomial to accept reals, added a 1D L2Projection toy — hcarson / detail
  203. Updated constructor signature — shunz / detail
  204. Added ping test for coupled HDGAdv IBL system.  [TBD]: JacobianParam and — shunz / detail
  205. sandbox edits — arthuang / detail
  206. revert sandbox not working — arthuang / detail
  207. Added Pseudo Time solving to DGAdvective Smoothbump toy. — jzavala / detail
  208. Cleaned up duct mesh generator files. — jzavala / detail
  209. Added arc mesh generator and corresponding toy test file. Updated — jzavala / detail
  210. Various fixes for LIP AIM — galbramc / detail
  211. Relaxed unit test timing a bit more — galbramc / detail
  212. relax tol — arthuang / detail
  213. Renamed arc mesh generator files to annulus. Minor changes elsewhere. — jzavala / detail
  214. HDGAdv progress: (1) jacobian w.r.t. parameter field now working for — shunz / detail
  215. Minor change. — jzavala / detail
  216. Completed HDGAdv jacobian w.r.t. parameter fields at boundary traces — shunz / detail
  217. Turned on HDGAdv jacobian w.r.t. paramter field at HubTrace, and it just — shunz / detail
  218. Ping test fixed, but the resulting jacobian is too ill-conditioned such — shunz / detail
  219. Minor fixes. — jzavala / detail
  220. branch change — hcarson / detail
  221. Removed non-determinstic wake intersection — galbramc / detail
  222. Fixed compile errors — galbramc / detail
  223. Another compile problem — galbramc / detail
  224. Undo — galbramc / detail
  225. Lots of work towards Zombies — galbramc / detail
  226. Forgot a file — galbramc / detail
  227. Fixed compile error — galbramc / detail
  228. Added sansLIPAIM to jenkins compile — galbramc / detail
  229. Hopefully fixed local2native DG indexing — galbramc / detail
  230. Updated and verified existing test cases — shunz / detail
  231. Added ping test for HDGAdvective HubTrace AES of uncoupled IBL — shunz / detail
  232. Added ping test — shunz / detail
  233. minor refactoring — shunz / detail
  234. minor refactoring — shunz / detail
  235. Intermediate commit: debugging coupled IBL — shunz / detail
  236. Coupled IBL with HDGAdv looks good qualitatively, compared to DG results — shunz / detail
  237. Fix for zombie counting — galbramc / detail
  238. Implemented HDGAdv cut-cell transition, and added ping test for forced — shunz / detail
  239. Higher-resolution ShuOsher case — blsc / detail
  240. added order and power runtime flags — hcarson / detail
  241. Added ping test for natural transition of HDGAdv cut-cell IBL — shunz / detail
  242. Added HDGAdv cut-cell case with natural transition — shunz / detail
  243. tweaks to case and considering a different stabilization — hcarson / detail
  244. Fixed a bug in HDG interface equation of ctau — shunz / detail
  245. Enabled checking of state validity of interior trace DOFs of HDGAdv — shunz / detail
  246. Q1D Adaptive Giles Pierce nozzle with p-sequencing — ursachi / detail
  247. Fixed bugs in HDG-IBL interface fluxes and equations — shunz / detail
  248. Added supersonic outflow BC — ursachi / detail
  249. Created grid and test case for adaptive 2D Giles Pierce nozzle — ursachi / detail
  250. switched amp source, and transition front flux treatment — shunz / detail
  251. minor refactoring on HDGAdv integrands for IBL — shunz / detail
  252. Hacking with mitLG type of matching condition at element interfaces and — shunz / detail
  253. minor refactoring — shunz / detail
  254. working on a new tau and moving some stuff to dev — hcarson / detail
  255. allowing command line spec — hcarson / detail
  256. VMS seems to be adapting properlygit status! — hcarson / detail
  257. conflicts — hcarson / detail
  258. typo — hcarson / detail
  259. put HDG interface flux and matching equation (source) into one function — shunz / detail
  260. Fixed the interface flux and source for the other version of HDG-IBL as — shunz / detail
  261. changing back to nDOF — hcarson / detail
  262. testing theory on linear basis for tau — hcarson / detail
  263. reverting to develop — hcarson / detail
  264. tool to guide mesh generator towards target metric from implied one — pcaplan / detail
  265. changes to Experimental2, gives p order scaling stabilization now — hcarson / detail
  266. changes to Experimental2, gives p order scaling stabilization now — hcarson / detail
  267. Changes to help converge forward facing step — blsc / detail
  268. DG field now includes zombies — galbramc / detail
  269. Minor fix — galbramc / detail
  270. tweaks — hcarson / detail
  271. fix to SolverInterface, and changes to NSFlat Plate — hcarson / detail
  272. using Exp not Exp2 as missing some instanations for LinAlg. — hcarson / detail
  273. Added missing include — galbramc / detail
  274. Need to remove LocalSolve2D_DGBR2_Triangle_AD_btest — galbramc / detail
  275. Proper parallel DGBR2 LocalSolve — galbramc / detail
  276. Reduce runtime for ElementLocalSolve3D_DGBR2_Tet_AD_btest — galbramc / detail
  277. Reduced number of partitions for — galbramc / detail
  278. Various fixes — galbramc / detail
  279. Added libMeshb solution reader — galbramc / detail
  280. Reworked multiscale metric so it mostly works — galbramc / detail
  281. Minor fixes — galbramc / detail
  282. Fix link error. Zero out Mach number of walls for MultiScale metric. — galbramc / detail
  283. Tweaks to DeltaWing MultiScale — galbramc / detail
  284. Typo — galbramc / detail
  285. Fixed bug in FunctionalBoundaryTrace_DGBR2 related to new partitioning — galbramc / detail
  286. Fixed some bugs related to new partitioning — galbramc / detail
  287. Forgot some steps in the fixes — galbramc / detail
  288. updated sansLIPAIM with consistent function signatures — galbramc / detail
  289. Reworking CG DOF ordering — galbramc / detail
  290. Added spactime diffusion option for 2D Euler with artificial viscosity — blsc / detail
  291. Updated test for new PDEEuler2D with artificial viscosity interface — blsc / detail
  292. Updated 2D CG edge numbering — galbramc / detail
  293. Added back working spacetime diffusion to euler in artificial viscosity — blsc / detail
  294. Updated 1D euler with optional spacetime diffusion — blsc / detail
  295. Changed Galerkin tag to DGAdv — ursachi / detail
  296. Added asserts to stop bad parameters using for spacetime — blsc / detail
  297. Formatting errors — blsc / detail
  298. Completely reworking CG field constructions — galbramc / detail
  299. More work on new CG Field creation — galbramc / detail
  300. Hopefully fixed intel error by extending boost::mpl::vector — blsc / detail
  301. Tried continuous nt but other variables discontinuous.  Not quite — shunz / detail
  302. Do not check HDG trace variable validity when those variables are — shunz / detail
  303. Cleaned up and only maintained two versions of cut-cell IBL: 1. HDG and — shunz / detail
  304. Committed a p0 HDG test case. (This is not expected to work for HDG that — shunz / detail
  305. The pyrite file in the last commit seems to be corrupted.. now updated — shunz / detail
  306. NavierStokes2D with artificial viscosity — blsc / detail
  307. Formatting issues — blsc / detail
  308. Missed a few files — blsc / detail
  309. Formatting fix — blsc / detail
  310. Formatting fix — blsc / detail
  311. Formatting fix — blsc / detail
  312. Fixed residual dump to be what is described in the paramter dictionary — shunz / detail
  313. Added pyrite file for uncoupled IBL — shunz / detail
  314. Verified pyrite tests & playing with test cases — shunz / detail
  315. Complete rework of CG field construction. Works in parallel now. Removed — galbramc / detail
  316. Fixed some warnings and compile errors — galbramc / detail
  317. Missing include — galbramc / detail
  318. More field initializations — galbramc / detail
  319. Slight efficiency improvement for HDG adjoint calculation — galbramc / detail
  320. Fixed another uninitialized field — galbramc / detail
  321. Minor edits — shunz / detail
  322. CG works in parallel! — galbramc / detail
  323. CG was missing boundary elements in parallel. Now it works! — galbramc / detail
  324. Fixed warning — galbramc / detail
  325. Added evalReferenceCoordinateHessian for 3D. More unit testing for — galbramc / detail
  326. Forgot some DOFs — galbramc / detail
  327. Relaxed tolerances — galbramc / detail
  328. Local solve updates — galbramc / detail
  329. Modified tolerances — galbramc / detail
  330. Remove print statements — galbramc / detail
  331. Updated 1D local solve and removed depricated test — galbramc / detail
  332. Tecplog xfld dump now includes node+cell ranks — galbramc / detail
  333. Include Galerkin integrands for DGBR2 boundary output functionals — galbramc / detail
  334. Fixed the fix — galbramc / detail
  335. Missing include — galbramc / detail
  336. fixing nightly warning — hcarson / detail
  337. Added a class that computes the natural transition location by looping — shunz / detail
  338. Started a new test case to examine iterative forced transition solution — shunz / detail
  339. changed the essential bc application to use ghost boundaries. No longer — hcarson / detail
  340. Fix for DGBR2 boundary output functionals — ursachi / detail
  341. BCEuler has vector size greater than 20 — ursachi / detail
  342. Iterative forced transition solution works quite well for the two cases — shunz / detail
  343. 2D DGAdvective error estimate order test — ursachi / detail
  344. Changed Nitche to Cb = 2.0 for AD CG P3 adaptation — galbramc / detail
  345. Fixing errors — ursachi / detail
  346. changed Dual to Dual2 in anticipation of the new local solve — hcarson / detail
  347. updated unit tests to use the ghost boundary trace freezing rule — hcarson / detail
  348. preparations for the alternative constructor — hcarson / detail
  349. cleanup of implied metric limiter — pcaplan / detail
  350. vera fixes — pcaplan / detail
  351. Fixing errors — ursachi / detail
  352. didn't mean to include a certain test — pcaplan / detail
  353. switching back to Dual notation, splitting the EdgeLocal and — hcarson / detail
  354. moved to ptrs in the base class, dry run for elemental version — hcarson / detail
  355. Topology instantiations and avro cmake updates — galbramc / detail
  356. Dummy push — ursachi / detail
  357. Fixed AVRO cmake typo. Minor format cleanup for limited metric. — galbramc / detail
  358. refactor to move most member variables into the base class XField_Common — hcarson / detail
  359. Forgot a file, and all non edge specific methods are now buried in the — hcarson / detail
  360. changed a template setup and added a first Element Local test — hcarson / detail
  361. Starting work on AFLR 16.26.2 — galbramc / detail
  362. new splitting routine compiles — hcarson / detail
  363. moved the split function up to Common level, made it more sophisticated — hcarson / detail
  364. Expanded the 3D split and changed the arguments for the 1D split to — hcarson / detail
  365. forgot you can't write to tmp/ — hcarson / detail
  366. find and replace bug — hcarson / detail
  367. typo in file name — hcarson / detail
  368. forgot test directory — hcarson / detail
  369. commented out some impossible branches in 2D, and added another unsplit — hcarson / detail
  370. unit tests — hcarson / detail
  371. ElementArea now calls the same actual split method as edge local — hcarson / detail
  372. added a copy constructor test, working on testing splits for Element — hcarson / detail
  373. a very first element local split test — hcarson / detail
  374. moved some memory outside of loops so it doesn't get created and — hcarson / detail
  375. unit tests for adding in new cellgroup 1 elements and traces, looks like — hcarson / detail
  376. unit test involving reattaching a cell group 1 boundary element — hcarson / detail
  377. Adding RK Riemann Problem — eam5515 / detail
  378. Added detection for transition front that occurs at element interfaces. — shunz / detail
  379. Various fixes to get NS GLS working in 3D — galbramc / detail
  380. Updated pyrite files for nightly testing — galbramc / detail
  381. Set longer timeout for specific long running unit tests — galbramc / detail
  382. caught the memory leak, and a bunch of instantiations and fixes and unit — hcarson / detail
  383. forgot a thing — hcarson / detail
  384. style check — hcarson / detail
  385. Added promote_Surreal for ParamTuple — galbramc / detail
  386. fixes: — hcarson / detail
  387. file renaming switches — hcarson / detail
  388. forgot to remove print out. — hcarson / detail
  389. added catch for ghost boundaries — hcarson / detail
  390. forgot file write — hcarson / detail
  391. missed a thing — hcarson / detail
  392. Don't do parallel solves yet with the new ElementDualLocal solves — galbramc / detail
  393. Added TimeOut BC for spacetime that is distinct from BCNone — blsc / detail
  394. some 4d stuff — pcaplan / detail
  395. placeholders for unit tests — pcaplan / detail
  396. Start working on latest AFLR4 — galbramc / detail
  397. Many cppcheck fixes, but not all — galbramc / detail
  398. Fixed compile error — galbramc / detail
  399. caught a ghost boundary bug, now have different bugs in parallel — hcarson / detail
  400. More work on latest AFLR4, does not work yet — galbramc / detail
  401. Updated Partiioning for CG element dual solves — galbramc / detail
  402. Relaxed tolerances on local solves — galbramc / detail
  403. Nightly fixes — galbramc / detail
  404. Upgraded PETSc version — galbramc / detail
  405. Fixed PETSc version test — galbramc / detail
  406. changed to allow Real indices for monomial — hcarson / detail
  407. added ghost tests, turned off the split ghost tests, as we don't have a — hcarson / detail
  408. Many AFLR4 updates — galbramc / detail
  409. changed some comments — hcarson / detail
  410. vim put some actual tabs in... and changing some odd pieces — hcarson / detail
  411. Another try — galbramc / detail
  412. warning about unset data — hcarson / detail
  413. Added 1D AR test file — ursachi / detail
  414. relaxing tolerance — hcarson / detail
  415. trace to cell reference coordinates (plus matlab script), — pcaplan / detail
  416. trace to cell reference coordinates (plus matlab script), — pcaplan / detail
  417. Added a tecplot dump for EGTessModel — galbramc / detail
  418. element topology tracks number of permutations so possible trace — pcaplan / detail
  419. More debugging outputs — galbramc / detail
  420. Fixes so boost xml files are correctly dumped — galbramc / detail
  421. Fixed system tests for coverage — galbramc / detail
  422. Allowed for longer run times on specific tests — galbramc / detail
  423. One more tweak for coverage of system tests — galbramc / detail
  424. Typo — galbramc / detail
  425. Missed one more — galbramc / detail
  426. Forgot to add files — galbramc / detail
  427. One more typo — galbramc / detail
  428. A slightly different version — galbramc / detail
  429. Minor fix — galbramc / detail
  430. Fixed find and replace mistake — galbramc / detail
  431. fixed a few bugs with trace-to-cell ref coordinates — pcaplan / detail
  432. hasFluxConservative is noe hasFluxAdvectiveTime — blsc / detail
  433. xfield and element definitions for pentatopes — pcaplan / detail
  434. spacetime field and element files — pcaplan / detail
  435. tolerance — hcarson / detail
  436. relaxed again — hcarson / detail
  437. field and xfield instantiations in 4d — pcaplan / detail
  438. map between quadrature points of different trace orienations (in 4d) — pcaplan / detail
  439. lingering space — pcaplan / detail
  440. unused variables...dont worry i'll unit test these functions — pcaplan / detail
  441. uninit fixes — pcaplan / detail
  442. 2D Riemann problem now uses surrogates — blsc / detail
  443. A box grid with two ghost boundaries — hcarson / detail
  444. added split tests with ghost boundaries attached to cell group 1, and — hcarson / detail
  445. duplicate test name — hcarson / detail
  446. Fixes to EGADS loop senses when sense is +/-2 — galbramc / detail
  447. Forgot a file — galbramc / detail
  448. Fixed array out-of-bounds in Pentatope basis function. Fixed memcheck — galbramc / detail
  449. Speed improvement for stabilized CG. 3DNS isothermal wall BC. Many other — galbramc / detail
  450. More robust jacobian check for CG Stabilized NS — galbramc / detail
  451. changed DOF sharing calculations to correctly use max, and to calculate — hcarson / detail
  452. Relaxed tolerance — galbramc / detail
  453. Fixed adjoint order error — ursachi / detail
  454. Check if error estimates are the same after several iterations — ursachi / detail
  455. 2D DGAdv error estimate order test — ursachi / detail
  456. moved the hard work split method into the common instantiation — hcarson / detail
  457. fixing up the 3D logic a little bit, the edge local still works, need to — hcarson / detail
  458. unsplit element dual tests — hcarson / detail
  459. Fixed warnings — galbramc / detail
  460. first, extremely basic split test — hcarson / detail
  461. another simple split test, now with reattaching boundary groups attached — hcarson / detail
  462. duplicate named tests — hcarson / detail
  463. some tests for ElementDual Solution transfer, no surprises — hcarson / detail
  464. duplicate test names — hcarson / detail
  465. Reworkd DOF sync so Newton syncs zombies. Linear solver timings — galbramc / detail
  466. Missed one — galbramc / detail
  467. Forgot to add timing variable for MKL_PARDISO — galbramc / detail
  468. Copy pasta — galbramc / detail
  469. added scaling and offest to TripleBL and changed naming convention to — hcarson / detail
  470. forgot the pattern update — hcarson / detail
  471. New parallel unit tests. Ghost/Zombie DOFs synced in Newton. PETSc build — galbramc / detail
  472. various changes to get 3D adapting — hcarson / detail
  473. a 3D CG adaptation! — hcarson / detail
  474. changes to 3D case to run on hypersonic — hcarson / detail
  475. Missing include — galbramc / detail
  476. to run a big case — hcarson / detail
  477. Updates for latest AFLR patches — galbramc / detail
  478. Custom build of gcc 8.2 — galbramc / detail
  479. Jenkims env fix for gcc8 — galbramc / detail
  480. Adding new RK unit test — eam5515 / detail
  481. Adding Complete RK unit test and new CMake list — eam5515 / detail
  482. AFLR4 now works. Need new library release. — galbramc / detail
  483. Cleanup RK Parallel Serial test. Have not found the bug yet. — galbramc / detail
  484. Fixes so RK works with new parallel paritioning — galbramc / detail
  485. Assert Galerkin Stabilized PDE fluxViscousLinearInGradient. Add CMake — galbramc / detail
  486. commiting a bunch of non-working tests and the 3D CG case. — hcarson / detail
  487. More updates for AFLR4 — galbramc / detail
  488. CG Field constructor minor speed improvements. Nightly tolerances. — galbramc / detail
  489. refactor to remove additional unneeded fields, should reduce the — hcarson / detail
  490. Improved the speed of CG Field constructors. Should help local solves. — galbramc / detail
  491. Minor fixes — galbramc / detail
  492. Upgraded cppcheck on reynolds — galbramc / detail
  493. A few more minor speed improvements to Galerkin error estimates. — galbramc / detail
  494. xfielddomain fixes for avro api changes — pcaplan / detail
  495. unit test fixes for avro changes — pcaplan / detail
  496. some unit testing on polytopes — pcaplan / detail
  497. push to mac for IMR — pcaplan / detail
  498. Fixed bug when parallelizing nodal metrics — galbramc / detail
  499. Fix for MultiScale metric — galbramc / detail
  500. moved integrand construction outside of loops for speed — hcarson / detail
  501. caught bug with assignment rather than accumulation — hcarson / detail
  502. that speed up didn't work.... — hcarson / detail
  503. added get options for orientation, and caught bug with invalid split — hcarson / detail
  504. added a check to see if element is owned by local processor — hcarson / detail
  505. unused variable — hcarson / detail
  506. Suppress cppcheck — galbramc / detail
  507. another unit test — hcarson / detail
  508. Added requested element print out. Fixed int for computing cost. — galbramc / detail
  509. some more unit tests and caught a bug — hcarson / detail
  510. Better CG load balancing. PETSc BAIJ works for processors with no DOF — galbramc / detail
  511. Fix for error estimate nodal outputField — galbramc / detail
  512. added dictionary options for SineSineSine — hcarson / detail
  513. hunting some int casts — hcarson / detail
  514. bumping that coverage up — hcarson / detail
  515. 3D Element Dual test — hcarson / detail
  516. Updated printout format — shunz / detail
  517. tweak — hcarson / detail
  518. Added mach output functional for DeltaWing — galbramc / detail
  519. Started to rework cmake folder test names — galbramc / detail
  520. forgot a dictionary — hcarson / detail
  521. Added mach field dump for MOESS delta wing — galbramc / detail
  522. New folder test names. We can revert/modify if they are awkward — galbramc / detail
  523. Missed XDIR related things — galbramc / detail
  524. dictionary fixes and parameter tweaks — hcarson / detail
  525. more dictionary fixes — hcarson / detail
  526. Periodic boundary support for gmsh reader — blsc / detail
  527. reduced test size — hcarson / detail
  528. Updates so refine might work in parallel — galbramc / detail
  529. Updated refine check with cmake — galbramc / detail
  530. shortened test again... — hcarson / detail
  531. Fixes for DeltaWing to dump mach field — galbramc / detail
  532. Removed deformationTime.dat — galbramc / detail
  533. PETSc uses x as initial guess. Use P-Adjoint as initial P+1-Adjoing with — galbramc / detail
  534. Clean up adjoint solve for DeltaWing — galbramc / detail
  535. Don't run refine in parallel yet — galbramc / detail
  536. changing to unstabilized for testing — hcarson / detail
  537. tweaks and removing an unintended file — hcarson / detail
  538. basic scheduler and timing dumps at the end of test adapthist — hcarson / detail
  539. Periodic gmsh fix for parallel — blsc / detail
  540. moving box — hcarson / detail
  541. mend — hcarson / detail
  542. moving box — hcarson / detail
  543. forgot to allow PETSC — hcarson / detail
  544. JacobianFunctionalCell_Galerkin now works in parallel. Other small — galbramc / detail
  545. Started a new test case — shunz / detail
  546. changed to copy construction — hcarson / detail
  547. Exposed Netwon iterations of free-transition solve — shunz / detail
  548. Missed a solution initialization for PETSc — galbramc / detail
  549. Added parallel interfac to XField_Lagrange. — galbramc / detail
  550. Updated XField3D_refine so it hopefully works in parallel — galbramc / detail
  551. Nested forced-transition solve within nonlinear solution of — shunz / detail
  552. work towards calling avro from parallel SANS — pcaplan / detail
  553. Added a patch to the corner case where transition happens at an element — shunz / detail
  554. refine API now works in parallel — galbramc / detail
  555. Don't allocate P and P+1 jacobian at the same time for Galerkin — galbramc / detail
  556. Forgot some files — galbramc / detail
  557. Various fixes — galbramc / detail
  558. More informative error messages — galbramc / detail
  559. One more fix for parallel grid creation — galbramc / detail
  560. Typo — galbramc / detail
  561. More robust EPIC call interface. Improved refine build. — galbramc / detail
  562. Fixed a bug in transition location identification within cells — shunz / detail
  563. Fixed memory leak — galbramc / detail
  564. More robust system call to refine — galbramc / detail
  565. might Edge local work? — hcarson / detail
  566. running a 3D CG adapt in parallel! — hcarson / detail
  567. forgot to actually use the scheduler — hcarson / detail
  568. Precondition adjoint P+1 solve with adjoint P solve for DGBR2 — galbramc / detail
  569. Forgot some files — galbramc / detail
  570. Wroking on L2 projections. Various fixes — galbramc / detail
  571. Fixes for L2 projection cases — galbramc / detail
  572. Typo — galbramc / detail
  573. added a targetCost scheduler — hcarson / detail
  574. unused variable and style fixes — hcarson / detail
  575. maintain same list of lower-dim egads entities for parallel — pcaplan / detail
  576. avro interface for delta wing case — pcaplan / detail
  577. Minor cleanup — galbramc / detail
  578. Fixes for running avro in parallel — galbramc / detail
  579. merge conflict — pcaplan / detail
  580. boundary conditions in the correct order... — pcaplan / detail
  581. xfielddomain constructor when sans_avro not defined, warning fixes — pcaplan / detail
  582. lingering comma — pcaplan / detail
  583. forgot to comment some testing things that dont work — pcaplan / detail
  584. Various fixes to refine. L2 CG projection works in parallel — galbramc / detail
  585. Fixes for refine. L2 cases to run for paper. — galbramc / detail
  586. Fixed warnings — galbramc / detail
  587. Using DirectLU for DeltaWing adjoint — galbramc / detail
  588. mods to avro interface, added Curved parameter to omit visiblity checks — pcaplan / detail
  589. Various fixes to refine interface and AD L2 cases. — galbramc / detail
  590. Added mlarocca@mit.edu to DeveloperEmailAddresses — mlarocca / detail
  591. Revived UniField IBL.  Verified system test on — shunz / detail
  592. Updated pyrite file.  Also revived and verified intra-cell forced — shunz / detail
  593. Minor cleanup — shunz / detail
  594. Commited: ready to run UniField IBL intra-cell forced transition in mass — shunz / detail
  595. Committed in order to run grid refinement in sweep of duplicate-field — shunz / detail
  596. Updates for latest fefloa — galbramc / detail
  597. Fixed a bug in grid convergence running script — shunz / detail
  598. lagrange basis function on pentatopes with unit tests — pcaplan / detail
  599. change to avro interface — pcaplan / detail
  600. All kinds of fixes — galbramc / detail
  601. Added a finer grid test case — shunz / detail
  602. 4d instantiations, still undefined refs with field & element — pcaplan / detail
  603. Fixed warnings/errors — galbramc / detail
  604. un-instantiated so i can test some things, previous push had wrong — pcaplan / detail
  605. getting final things off of devastator — hcarson / detail
  606. premerge — pcaplan / detail
  607. missing instantiations, fixing a few undef references — pcaplan / detail
  608. Relaxed tolerance — galbramc / detail
  609. Unified robuster system call function — galbramc / detail
  610. Fix mistakes I made related to label in XFieldDomain — galbramc / detail
  611. Fixed analyzer warnings — galbramc / detail
  612. prelim kuhn-freudenthal triangulation via avro — pcaplan / detail
  613. Upgraded builds to latest NLOPT and PETSc. — galbramc / detail
  614. Corrected comments, added filesysteming. — cfrontin / detail
  615. lagrange DOF map & trace2cellrefcoord + unit tests — pcaplan / detail
  616. Added some 4D stuff and some comments to help clarify things as I come — cfrontin / detail
  617. lagrange dof map testing — pcaplan / detail
  618. Fixes for latest AFLR — galbramc / detail
  619. Updates for L2 projection cases — galbramc / detail
  620. Indexing bug — galbramc / detail
  621. re-order lattice coordinates so we have canonical vertices first — pcaplan / detail
  622. moved eigenvalue calculation to impl + unit tests for 4x4 — pcaplan / detail
  623. spacetime element associativity + unit tests — pcaplan / detail
  624. Added Triple BL to the MultiScale test — galbramc / detail
  625. normal of tet in 4d via svd — pcaplan / detail
  626. finish implementation of tet normal in 4d — pcaplan / detail
  627. elementxfieldspacetime jacobian + volume + unit tests — pcaplan / detail
  628. constructed a 4d xfield! — pcaplan / detail
  629. wrap kuhn freudenthal triangulation around SANS_AVRO ifdef — pcaplan / detail
  630. still cant remember how to trigger dummy commit... — pcaplan / detail
  631. and again... — pcaplan / detail
  632. trailing whitespace — pcaplan / detail
  633. Tweak to refine build — galbramc / detail
  634. Bumped up timing more for Hex Lagrange Cache test — galbramc / detail
  635. Fixed missing feenableexcept on MacOS, thus enabling us to turn on — shunz / detail
  636. Added L2 Projection solver interface — galbramc / detail
  637. Galerkin TripleBoundaryLayer case using MultiScale metric — hcarson / detail
  638. git jenkins not working...dummy commit — pcaplan / detail
  639. Added CG for L2Projection — galbramc / detail
  640. added boundary functional and mathematica notebook for computing exact — hcarson / detail
  641. removing unworking test from repo — hcarson / detail
  642. changed default to 1.0 for Frob constraint — hcarson / detail
  643. added scale and offset to 1D BL — hcarson / detail
  644. Missing include — galbramc / detail
  645. change case — pcaplan / detail
  646. element ridge (TopoDim-2 elements) needed to construct 4d elems — pcaplan / detail
  647. xfielddomain holds ego children not SANS::EGObject, reason is because — pcaplan / detail
  648. instantiations for 4d target metric matching — pcaplan / detail
  649. CG field construction for TopoD4 meshes, tested on p=1 — pcaplan / detail
  650. target metric matching in 4d sandbox — pcaplan / detail
  651. Refactored projection to Qauxi_IBL by unifying implementations for — shunz / detail
  652. element ridge unit test + equilateral pentatope jacobian — pcaplan / detail
  653. fixed bug with equilateral pentatope jacobian + matlab script + unit — pcaplan / detail
  654. added a boundary output for the triple BL, various clean ups, reverting — hcarson / detail
  655. Refactored UniField IBL variable interpreter.  More work needed to — shunz / detail
  656. Minor refactoring.  Updated pyrite file. — shunz / detail
  657. Refactoring.  Realizing that using ctau is fragile since log(ctau) is — shunz / detail
  658. Refactored UniField variable/eqns to use nt as a conservative quantity — shunz / detail
  659. Restored panel method unit test — shunz / detail
  660. Tweaked iteration limit to wait until convergence — shunz / detail
  661. Refactored constructors of IBL PDE and fluid models.  Started — shunz / detail
  662. Added 2D+T AD case, in progress, with assorted necessary changes. Still — cfrontin / detail
  663. Fix typo — galbramc / detail
  664. field element pentatope tests — pcaplan / detail
  665. debugging costmodel_logeuclidean on topoD4 ping tests — pcaplan / detail
  666. brace alignment — pcaplan / detail
  667. uncomment xfieldspacetime_pentatope tests until actually implemented — pcaplan / detail
  668. unused defs — pcaplan / detail
  669. undefined references without avro — pcaplan / detail
  670. sign compare — pcaplan / detail
  671. missing file to compile — pcaplan / detail
  672. lingering comma — pcaplan / detail
  673. ridge -> frame — pcaplan / detail
  674. undef references — pcaplan / detail
  675. commit deleted files — pcaplan / detail
  676. wrap ifdef SANS_AVRO further ahead — pcaplan / detail
  677. omit spacetime pentatope btest from memcheck because it takes a long — pcaplan / detail
  678. instantiate matrixsyms4 projection for tets — pcaplan / detail
  679. basis function instantiate — pcaplan / detail
  680. matmul instantiation — pcaplan / detail
  681. reduced number of orientations to make elementspacetime_pentatope test — pcaplan / detail
  682. Remove maybe uninitialized wanrings on gnu 8 — galbramc / detail
  683. last instantiation i promise — pcaplan / detail
  684. bug in cost model log-euclidean test because of the vertex/step matrix — pcaplan / detail
  685. seriously this has to be the last one — pcaplan / detail
  686. last one! — pcaplan / detail
  687. trigger commit — pcaplan / detail
  688. up to p=2 for element space time test because it's really slow — pcaplan / detail
  689. Revamped Qauxv/parameters API. — shunz / detail
  690. Fixed typos — shunz / detail
  691. Propagated more changes in IBL parameter API.  Verified coupled IBL — shunz / detail
  692. Fixed more tests related to IBL parameter API — shunz / detail
  693. Update — shunz / detail
  694. Verified two system tests with PDEIBL2D using LF flux. — shunz / detail
  695. Fixed uncoupled IBL HDG case — shunz / detail
  696. 2D+T is running, working towards validation. — cfrontin / detail
  697. Added json parser to PyDict — galbramc / detail
  698. Fixed formatting from vera++. Also reformulated 2D+T case for — cfrontin / detail
  699. switched from pure adv to AD for hypersonic. — cfrontin / detail
  700. 2D+T AD ST toy fix; need unit tests for BCAD2D.h — cfrontin / detail
  701. Fixed bugs in PDEIBLUniField — shunz / detail
  702. Lots of refactoring of AFLR4 and sansLIPAIM. All seems to be — galbramc / detail
  703. Minor fix — galbramc / detail
  704. Tweak to how AFLR is found — galbramc / detail
  705. Fixed compile error — galbramc / detail
  706. Update minimum boost version to 1.50 due to bug in property_tree json — galbramc / detail
  707. Merged AFLR4 test into EGTessModel — galbramc / detail
  708. Fixed flux feedthrough for 2D+T AD. — cfrontin / detail
  709. More extensive try with sansLIPAIM — galbramc / detail
  710. Most sansLIP updates — galbramc / detail
  711. Fix MKL_PARDISO for transpose solves. Bug fix for AFLR3 — galbramc / detail
  712. Use static MKL libraries due to python issues — galbramc / detail
  713. Don't statically link in the ld library — galbramc / detail
  714. Increased timout time for HDG test — galbramc / detail
  715. Realzed timing on another test — galbramc / detail
  716. Refactored UniField IBL and ran it for forced and free transition — shunz / detail
  717. Played captured transition (forced and free) — shunz / detail
  718. Updated initial solution guesses for reformulated captured transition — shunz / detail
  719. Unified system test on the case of uncoupled IBL laminar BL on airfoil — shunz / detail
  720. Refactored IBL numerical fluxes — shunz / detail
  721. Updated pyrite files for coupled coupled IBL cases with — shunz / detail
  722. Moved 2D+T convergence to Solve3D, made Adapt3D version adapt. — cfrontin / detail
  723. Typo fix. — cfrontin / detail
  724. Ran and added pyrite files for captured forced transition without using — shunz / detail
  725. push to hypersonic — pcaplan / detail
  726. Verified reasonable agreement between natural transition solution of — shunz / detail
  727. Added recent-5 to Adapt3D 2D+T AD — cfrontin / detail
  728. Added MKL instantiation — shunz / detail
  729. Separate list of MKL static libraries — galbramc / detail
  730. Always link in MKL statically with sansLIPAIM — galbramc / detail
  731. Moved error message for sansLIP — galbramc / detail
  732. Building mpi all_reduce into FunctionalCell_Galerkin — galbramc / detail
  733. Added missing includes — galbramc / detail
  734. Minor edits — shunz / detail
  735. Changed default numerical flux — shunz / detail
  736. Added pyrite files for fitted transition of forced cases — shunz / detail
  737. Removed redundant cases — shunz / detail
  738. Minor updates — shunz / detail
  739. Added an alternative turbulent onset ctau value — shunz / detail
  740. Updates before running grid convergence on fitted transition — shunz / detail
  741. fixed a bug in PDEIBL source.  other minor fixes — shunz / detail
  742. Updated pyrtied files to fix the bug in PDEIBL lag source term — shunz / detail
  743. Tweaked a default setting for system test pyrite checks — shunz / detail
  744. Cleaned up system tests — shunz / detail
  745. Fixed free-forced nested solver logic for transition at element — shunz / detail
  746. Updated and cleaned up pyrite files — shunz / detail
  747. Updated an initial solution file for flow transition system tests — shunz / detail
  748. Renaming — shunz / detail
  749. minor updates — shunz / detail
  750. Added a to-do — shunz / detail
  751. added to-do — shunz / detail
  752. Refactored two system tests.  Added options to change transition model — shunz / detail
  753. Fixed a bug/feature in an unimportant if statement — shunz / detail
  754. Cleanup — shunz / detail
  755. Cleaned up deprecated parts.  Fixed LF flux.  Refactored transition — shunz / detail
  756. Fixed uninitialized data in Flux_mitState_Nitsche for pure advective. — galbramc / detail
  757. Updated pyrite file after updating PDEIBL LFflux related stuff — shunz / detail
  758. Removed variable length arrays — galbramc / detail
  759. Replaced turbulent BL TS wave growth rate with the previous formulation — shunz / detail
  760. Minor refactoring — shunz / detail
  761. Fixed LFflux for IBLUniField.  Refactored test case and updated pyrite — shunz / detail
  762. Missed a few variable length arrays — galbramc / detail
  763. One more warning — galbramc / detail
  764. Refactored PDEIBLUniField member field to allow for parameter ntcrit — shunz / detail
  765. Fixed warnings — galbramc / detail
  766. Better cleanup of coverage information — galbramc / detail
  767. Don't build sandbox with nightly — galbramc / detail
  768. Clang analyzer should still build sandbox — galbramc / detail
  769. Revived gradation penalty. Needs lots of tweaks and studying — galbramc / detail
  770. Added unit test for 2D+T implementations. — cfrontin / detail
  771. Working on pentatope tests. — cfrontin / detail
  772. Updates for latest version of AFLR — galbramc / detail
  773. Gradation still needs more work... — galbramc / detail
  774. Fix compiler error — galbramc / detail
  775. Fixed arry bound typo in test — galbramc / detail
  776. more tests for orientations of tets in 4d — pcaplan / detail
  777. lingering changes — pcaplan / detail
  778. DG fields in 4d + unit tests — pcaplan / detail
  779. silly typo — pcaplan / detail
  780. can only use KF triangulation if avro is hooked in — pcaplan / detail
  781. Working on unit grids... — cfrontin / detail
  782. Another formatting fix. — cfrontin / detail
  783. Another formatting fix. — cfrontin / detail
  784. minor editting — shunz / detail
  785. Fix includes. — cfrontin / detail
  786. pre merge — hcarson / detail
  787. Taking the warning machete to things. — cfrontin / detail
  788. Refactored test case input — shunz / detail
  789. Udpates to sansLIPAIM to work with new CAPS dataTransfer setup — galbramc / detail
  790. system test for DG with pentatopes — pcaplan / detail
  791. Minor update — shunz / detail
  792. Added an option of wake ctau_eq but not used — shunz / detail
  793. moving to hyper branch — hcarson / detail
  794. use SANS convention for trace orientation instead of the one used in — pcaplan / detail
  795. 1Ptope test working, fixed assumptions on nodal definitions. — cfrontin / detail
  796. 2Tope unitgrid working, testcase working. — cfrontin / detail
  797. Turned off tesseract for push. — cfrontin / detail
  798. Light LIP tecplot files — galbramc / detail
  799. Smaller tecplot file for LIP — galbramc / detail
  800. Fix scoping issues. — cfrontin / detail
  801. Fixed warnings — galbramc / detail
  802. Added comment with origin of SVD3 algorithm — galbramc / detail
  803. handmade unit grid: 1 pentatope with 5 pentatope neighbours — pcaplan / detail
  804. allow all orientations of traces (1 to 12) in checkGrid — pcaplan / detail
  805. local grid extraction for pentatopes — pcaplan / detail
  806. cell to trace connectivity for pentatopes — pcaplan / detail
  807. finish implementation of element associativity of pentatopes — pcaplan / detail
  808. unit tests for local grid extraction around pentatopes (single pentatope — pcaplan / detail
  809. other minor changes — pcaplan / detail
  810. comm rank = 0 using xfield_lagrange — pcaplan / detail
  811. 24Ptope working, passing checkGrids(). test in progress. — cfrontin / detail
  812. remove duplicate unit grids in favour of handmade ones — pcaplan / detail
  813. warning fix — pcaplan / detail
  814. warning fix — pcaplan / detail
  815. 24Ptope unit grid working, tested and working. — cfrontin / detail
  816. Add duration to each build in Jenkins email. — galbramc / detail
  817. tweaks and removed a bunch of heap memory allocations — hcarson / detail
  818. added options to the quadratic — hcarson / detail
  819. mods for running with avro — hcarson / detail
  820. comment typos — hcarson / detail
  821. switching over to avro — hcarson / detail
  822. Reworked build of parmetis. refine uses parmetis. added avro build. — galbramc / detail
  823. Fixes for avro and refine — galbramc / detail
  824. Suppress warning — galbramc / detail
  825. Parallel Field4D test fixes. Give refine more time. — galbramc / detail
  826. Relaxed tolerance for intel — galbramc / detail
  827. Don't run ErrorOrder_4D in parallel — galbramc / detail
  828. Updated refine build — galbramc / detail
  829. Updated refine check — galbramc / detail
  830. Nightly build fixes... plus a stopgap ifdef until the SVDless 4D normal — cfrontin / detail
  831. Reduce run time of 4D error order check — galbramc / detail
  832. Relaxed another tolerance — galbramc / detail
  833. Remove files written by avro — galbramc / detail
  834. Dissable refine testing for now — galbramc / detail
  835. Added memcheck to parmetis build — galbramc / detail
  836. Ignore external parmetis — galbramc / detail
  837. changing branch — hcarson / detail
  838. Generalized valgrind suppression — galbramc / detail
  839. egads coords must have 3 dimensions even in 2d — pcaplan / detail
  840. Suppressed CMakeLists errors. [TBD] — shunz / detail
  841. Fixed panel metod tests — shunz / detail
  842. AFLR4 updates and some Jenkins scripts — galbramc / detail
  843. Link tetgen before avro — galbramc / detail
  844. instantation of elementlocal version of local splits for 4d...unit test — pcaplan / detail
  845. missing definitions for elementlocal & edgelocal — pcaplan / detail
  846. some instantiations of savi's method for doing local splits — pcaplan / detail
  847. xfield_lagrange method of doing local splits...still debugging...will — pcaplan / detail
  848. Refactoring.  Patched unit tests — shunz / detail
  849. More unit tests — shunz / detail
  850. added unit tests — shunz / detail
  851. Fixed unit tests — shunz / detail
  852. Fixed IBL unit tests — shunz / detail
  853. Added unit test.  Turned off unused methods. — shunz / detail
  854. Fixed a bug in CMakeLists: use of out-of-scope variable — shunz / detail
  855. Fixed a bug in cmake files that only appear when building with Xcode — shunz / detail
  856. Refactored ping test input array type.  Fixed IBL-related 4x4 block — shunz / detail
  857. Relocated code into SANS_MPI macros; otherwise, errors are raised about — shunz / detail
  858. Verified/fixed/cleaned IBL system tests with transition (full upwind). — shunz / detail
  859. Fixed duplicate naming of boost test suite — shunz / detail
  860. Relaxed pyrite tolerance — shunz / detail
  861. Updated forced-transition pyrite files after the bug fix in commit — shunz / detail
  862. Turned off file dump — shunz / detail
  863. Fixed formatting — shunz / detail
  864. Fixed empty traling line — shunz / detail
  865. Fixed DG and HDG AES tests for uncoupled IBL — shunz / detail
  866. Fixed formatting — shunz / detail
  867. Reverted changes to (viscous) HDG stuff: those abandoned changes treated — shunz / detail
  868. Update AlgebraicEquationSet_HDGAdvective_Advection_btest.cpp — shunz / detail
  869. Fixed one more test affected by ping test refactoring.  Fixed formatting — shunz / detail
  870. Fixed another system test affected by IBL Qauxv interpreter refactoring — shunz / detail
  871. Update ErrorOrder_1D_HDGAdvective_Advection_btest.cpp — shunz / detail
  872. Fixed warning and missing instantiation — shunz / detail
  873. Added an instantiation just for completeness, although it is no longer — shunz / detail
  874. Cleaned sandbox cases — shunz / detail
  875. relaxed tolerances for clang_release — shunz / detail
  876. Suppressed output — shunz / detail
  877. Fixed bugs in CMakeLists — shunz / detail
  878. Fixed HDG advection tests — shunz / detail
  879. Removed the pure advection test case using (viscous) HDG machinery — shunz / detail
  880. Refactored halving line search and fixed unit tests — shunz / detail
  881. Fixed memory errors — shunz / detail
  882. Relaxed tolerance for intel — shunz / detail
  883. relaxed tolerances for intel18 — shunz / detail
  884. Relaxed timeout limits — shunz / detail
  885. Speed up unit tests in response to Jenkins timeout — shunz / detail
  886. Fixed typo — shunz / detail
  887. Relaxed tolerance for gnu48 — shunz / detail
  888. Tried to fix timeout on Jenkins testing (coverage_clang reynolds) — shunz / detail
  889. Reverted CMakeLists to see if TIMEOUT is set properly this time on — shunz / detail
  890. minor refactoring — shunz / detail
  891. Refactored CMakeLists for Xcode build — shunz / detail
  892. Refactored Newton solver — shunz / detail
  893. Minor fix — shunz / detail
  894. Fixed warnings — shunz / detail
  895. Added IBL max update fraction — shunz / detail
  896. Enabled under-relaxed Newton update for coupled 4x4 block system of IBL — shunz / detail
  897. Refactor of avro XField interface — galbramc / detail
  898. Consistent logic for setting cmake testing timout property — galbramc / detail
  899. Fixed refine interface change — galbramc / detail
  900. Fix ifdef when not using avro — galbramc / detail
  901. More fixes to deal with avro — galbramc / detail
  902. Minor cleanup — galbramc / detail
  903. Added unit tests for IBL updateFraction — shunz / detail
  904. Upgrade PETSc — galbramc / detail
  905. More avro and PETSc tweaks — galbramc / detail
  906. I don't understand why dl library is needed to link a static library... — galbramc / detail
  907. Fix for refine check — galbramc / detail
  908. Suppress compiler warning when building PETSc — galbramc / detail
  909. Fix for avro with 4D — galbramc / detail
  910. Enable refine testing again — galbramc / detail
  911. Updated copyright date to 2019 — galbramc / detail
  912. Updated copyright date to 2019 — galbramc / detail
  913. dimension-independent local splits — pcaplan / detail
  914. timing tests show dim-independent implementation on par with savithru's — pcaplan / detail
  915. reconciling merge conflicts and some tweaks — hcarson / detail
  916. license updates — hcarson / detail
  917. fixes to match avro — hcarson / detail
  918. forgot to add the avro defined precompile check — hcarson / detail
  919. relaxed tolerances and forgot to split world — hcarson / detail
  920. tweaking tol again... — hcarson / detail
  921. another tweak... — hcarson / detail
  922. cleanup of localpatch + commenting — pcaplan / detail
  923. copyright — pcaplan / detail
  924. more copyright — pcaplan / detail
  925. Updates for MOESS optimizations. Still needs more work. — galbramc / detail
  926. Instantiations for 4D AD solve. — galbramc / detail
  927. A few fixes — galbramc / detail
  928. Compile fixes — galbramc / detail
  929. More instantiations for 4D — galbramc / detail
  930. removed anachronistic definition of primal grid. Primal grid now matches — hcarson / detail
  931. make sure mpi is init'd before calling rank by actually running in — pcaplan / detail
  932. revert back to dual — pcaplan / detail
  933. ifdef SANS_AVRO for tests with CKF triangulation — pcaplan / detail
  934. changed to Dual in the system test — hcarson / detail
  935. attempted to fix nightly tests — shunz / detail
  936. Relaxed timings, fixed warning — galbramc / detail
  937. Updated pyrite files to fix nightly tests — shunz / detail
  938. Moved timing test into sandbox — galbramc / detail
  939. Cleanup of refine interface with auto memory management. — galbramc / detail
  940. Fix include — galbramc / detail
  941. added fix to 3D — hcarson / detail
  942. removed the separate 4D file, just added an instantiate at the end of 3D — hcarson / detail
  943. p=7 led to error close to machine zero, which seemed to cause touble to — shunz / detail
  944. p=6 still too high for pyrite test for ErrorOrder — shunz / detail
  945. Attempted to warning "use of zero-allocated memory" — shunz / detail
  946. Some cleanup in the sandbox. Added 2D L2Project adaptation — galbramc / detail
  947. Added tecplot dump for metric fields. Other small fixes — galbramc / detail
  948. Minor refactoring — shunz / detail
  949. Compile fixes and more dependency warning suppressions — galbramc / detail
  950. Add dl library for avro — galbramc / detail
  951. Replaced nt transport equation with G variable as in SciTech paper, — shunz / detail
  952. Added scalar and dot product fixes for MatrixSymS — galbramc / detail
  953. Fixed intel errors by relaxing tolerance and reconciling a missing — shunz / detail
  954. Updates for 2D L2 Projection sandbox test — galbramc / detail
  955. Updates for 1D L2 Projection sandbox test — galbramc / detail

#231 (Dec 8, 2018, 9:31:08 AM)

  1. Added H tensor output from Euler2D — blsc / detail
  2. Working on new AFLR4 interface — galbramc / detail
  3. some tweaks — hcarson / detail
  4. tweaks — hcarson / detail
  5. Debugging AFLR4 — galbramc / detail
  6. removing erroneous refine things — hcarson / detail
  7. getting acdl develop CMakeIncludes — hcarson / detail
  8. more tweaks — hcarson / detail
  9. moving to hypersonic — hcarson / detail
  10. change to let MPI build the directories just in time — hcarson / detail
  11. too many white lines — hcarson / detail
  12. to run on devastator — hcarson / detail
  13. tweaks for hypersonic — hcarson / detail
  14. Nodal Error estimate. Takes the average of the attached nodes, the — hcarson / detail
  15. hacking about trying Nodal Estimation — hcarson / detail
  16. typo/bug maybe? — hcarson / detail
  17. another one — hcarson / detail
  18. pre merge — hcarson / detail
  19. Multiscale metric case, debugging printing a continuous Mach number — hcarson / detail
  20. pre merge — hcarson / detail
  21. forgot to assert the basis was the same for the two fields — hcarson / detail
  22. projects from the Dfld basis onto the Cfld basis so accumulating to the — hcarson / detail
  23. pre merge — hcarson / detail
  24. seems to write Mach number solbs now — hcarson / detail
  25. moving to hypersonic — hcarson / detail
  26. a fix to go to hypersonic — hcarson / detail
  27. weird tecplot bug — hcarson / detail
  28. compiles again, moving to devastator — hcarson / detail
  29. MultiScaleMetric for transfering to NASA — hcarson / detail
  30. moving to laptop — hcarson / detail
  31. transfering to Dev — hcarson / detail
  32. moving to devastator to get EPIC — hcarson / detail
  33. --ammend — hcarson / detail
  34. moving to devastator — hcarson / detail
  35. transfering to dev — hcarson / detail
  36. moving to hyper — hcarson / detail
  37. pre merge — hcarson / detail
  38. tweak — hcarson / detail
  39. added output dump info to MultiScaleMetric case, should be ready to — hcarson / detail
  40. making MultiScale and MOESS cases consistent and ready for hypersonic — hcarson / detail
  41. tweaks back to labbox — hcarson / detail
  42. Updates for edge based AFLR4 calculations — galbramc / detail
  43. Backwards facing step unit grid — hcarson / detail
  44. pre merge commit — hcarson / detail
  45. backwards step cases — hcarson / detail
  46. removed SolverInterface_Nodal_Galerkin, it ended up only a tiny tweak — hcarson / detail
  47. added options for tweaking order of the tau stabilization. Can force the — hcarson / detail
  48. added Arthur's version of Experimental, copied from his email — hcarson / detail
  49. preprocessor defined version with volume weighting, ought to remove this — hcarson / detail
  50. forgot the CMakeLists — hcarson / detail
  51. DG case updates — hcarson / detail
  52. nodal test passes again — hcarson / detail
  53. pre merge — hcarson / detail
  54. moving back to nia — hcarson / detail
  55. moving to dev — hcarson / detail
  56. tweaks to case — hcarson / detail
  57. pre merge — hcarson / detail
  58. moving to dev — hcarson / detail
  59. pre merge — hcarson / detail
  60. added an argument for fixing the order used in the calculation of tau. — hcarson / detail
  61. mod solution fcn — arthuang / detail
  62. moving to dev — hcarson / detail
  63. moving to dev — hcarson / detail
  64. 2D refine interface, it doesn't work yet — hcarson / detail
  65. hacks to move to NASA box — hcarson / detail
  66. went back to nNodes for advective stabilization — arthuang / detail
  67. changed to all take order of stabilization as argument to stab — hcarson / detail
  68. diff got lost in the merge, and a line too long — hcarson / detail
  69. forgot the refine preprocessor bits, and a curly brace was one space — hcarson / detail
  70. vera fixes — hcarson / detail
  71. forgot another one — hcarson / detail
  72. tweaks for jenkins — hcarson / detail
  73. curly braces again — hcarson / detail
  74. fixed coarsening node numbering bug, added a unit test to guard it — hcarson / detail
  75. forgot some things — hcarson / detail
  76. fixed warning about unread data — hcarson / detail
  77. modified stabilized output, reverted to node based advection — arthuang / detail
  78. sandbox, added high order quads to PX mesh reader, fixed periodic bug in — jzavala / detail
  79. Removed tabs from files in previous commit. — jzavala / detail
  80. stabilization consistent and passing unit tests. updated nitsche — arthuang / detail
  81. Fixed curly brackets formatting in previous commit's files. — jzavala / detail
  82. Minor cleanup — galbramc / detail
  83. Fixed continuous-param assumption for fluxViscous — blsc / detail
  84. Unit tests passing with param bug fix — blsc / detail
  85. Fixed a nightly warning — galbramc / detail
  86. 1D spacetime shock problems — blsc / detail
  87. Formatting errors — blsc / detail
  88. More bug fix — blsc / detail
  89. Adding hinge computation from CSM. Other minor cleanup. — galbramc / detail
  90. testing with avro — pcaplan / detail
  91. Forward facing step unit grid and spacetime euler2d artificial viscosity — blsc / detail
  92. Turned off some debug output — blsc / detail
  93. PETSc option for spacetime forward facing step — blsc / detail
  94. Work towards Zombie DOFs — galbramc / detail
  95. Updates for LIP solver to use hinge lines — galbramc / detail
  96. Fixed inconsistency in LIPSolver sensitivity — galbramc / detail
  97. Fixed PETSc setup in step case — blsc / detail
  98. Unit test for forward facing step grid — blsc / detail
  99. New Euler BC unit tests — blsc / detail
  100. Fixed index bug for Zombies — galbramc / detail
  101. Tweak for building tetgen with MSYS — galbramc / detail
  102. Added system call option for refine — galbramc / detail
  103. Maybe BDF case for forward facing step — blsc / detail
  104. Updates for calling refine with a system call — galbramc / detail
  105. More refine fixes — galbramc / detail
  106. One more refine fix. And some sansLIPAIM fixes. — galbramc / detail
  107. Missing include — galbramc / detail
  108. Correct missing include — galbramc / detail
  109. Minor fix — galbramc / detail
  110. Made the volume generator option for sansLIP. — galbramc / detail
  111. Default meshesr for sansLIP — galbramc / detail
  112. Added Lagrange-basis duct mesh creator and corresponding sandbox test — jzavala / detail
  113. Working on a bug in sansLIPAIM — galbramc / detail
  114. sansLIPAIM fix — galbramc / detail
  115. Fixed sansLIP data transfer with hinge bodies — galbramc / detail
  116. Fixed formatting errors. — jzavala / detail
  117. moess to minimize distance between implied metric and target field — pcaplan / detail
  118. move to new branch — pcaplan / detail
  119. a few (very simple) pentatope things — pcaplan / detail
  120. metric optimisation to match target metric — pcaplan / detail
  121. delete bad stuff — pcaplan / detail
  122. Fixed more formatting errors. — jzavala / detail
  123. Renamed duct mesh generator header and source files and edited — jzavala / detail
  124. testing with metric optimizer, will definitely fail jenkins — pcaplan / detail
  125. forgot to remove cmake add_subdir for my sandbox, will gitignore — pcaplan / detail
  126. vera fixes, missing file — pcaplan / detail
  127. try to fix invalid initializations — pcaplan / detail
  128. Renamed the duct mesher file mentioned inside CMakeLists.txt — jzavala / detail
  129. removed the rfld dumping as it doesn't work in parallel — hcarson / detail
  130. changed monomial to accept reals, added a 1D L2Projection toy — hcarson / detail
  131. changed monomial to accept reals, added a 1D L2Projection toy — hcarson / detail
  132. sandbox edits — arthuang / detail
  133. revert sandbox not working — arthuang / detail
  134. Added Pseudo Time solving to DGAdvective Smoothbump toy. — jzavala / detail
  135. Cleaned up duct mesh generator files. — jzavala / detail
  136. Added arc mesh generator and corresponding toy test file. Updated — jzavala / detail
  137. Various fixes for LIP AIM — galbramc / detail
  138. Relaxed unit test timing a bit more — galbramc / detail
  139. relax tol — arthuang / detail
  140. Renamed arc mesh generator files to annulus. Minor changes elsewhere. — jzavala / detail
  141. Minor change. — jzavala / detail
  142. Minor fixes. — jzavala / detail
  143. branch change — hcarson / detail
  144. Removed non-determinstic wake intersection — galbramc / detail
  145. Fixed compile errors — galbramc / detail
  146. Another compile problem — galbramc / detail
  147. Undo — galbramc / detail
  148. Lots of work towards Zombies — galbramc / detail
  149. Forgot a file — galbramc / detail
  150. Fixed compile error — galbramc / detail
  151. Added sansLIPAIM to jenkins compile — galbramc / detail
  152. Hopefully fixed local2native DG indexing — galbramc / detail
  153. Fix for zombie counting — galbramc / detail
  154. Higher-resolution ShuOsher case — blsc / detail
  155. added order and power runtime flags — hcarson / detail
  156. tweaks to case and considering a different stabilization — hcarson / detail
  157. Q1D Adaptive Giles Pierce nozzle with p-sequencing — ursachi / detail
  158. Added supersonic outflow BC — ursachi / detail
  159. Created grid and test case for adaptive 2D Giles Pierce nozzle — ursachi / detail
  160. working on a new tau and moving some stuff to dev — hcarson / detail
  161. allowing command line spec — hcarson / detail
  162. VMS seems to be adapting properlygit status! — hcarson / detail
  163. conflicts — hcarson / detail
  164. typo — hcarson / detail
  165. changing back to nDOF — hcarson / detail
  166. testing theory on linear basis for tau — hcarson / detail
  167. reverting to develop — hcarson / detail
  168. tool to guide mesh generator towards target metric from implied one — pcaplan / detail
  169. changes to Experimental2, gives p order scaling stabilization now — hcarson / detail
  170. changes to Experimental2, gives p order scaling stabilization now — hcarson / detail
  171. Changes to help converge forward facing step — blsc / detail
  172. DG field now includes zombies — galbramc / detail
  173. Minor fix — galbramc / detail
  174. tweaks — hcarson / detail
  175. fix to SolverInterface, and changes to NSFlat Plate — hcarson / detail
  176. using Exp not Exp2 as missing some instanations for LinAlg. — hcarson / detail
  177. Added missing include — galbramc / detail
  178. Need to remove LocalSolve2D_DGBR2_Triangle_AD_btest — galbramc / detail
  179. Proper parallel DGBR2 LocalSolve — galbramc / detail
  180. Reduce runtime for ElementLocalSolve3D_DGBR2_Tet_AD_btest — galbramc / detail
  181. Reduced number of partitions for — galbramc / detail
  182. Various fixes — galbramc / detail
  183. Added libMeshb solution reader — galbramc / detail
  184. Reworked multiscale metric so it mostly works — galbramc / detail
  185. Minor fixes — galbramc / detail
  186. Fix link error. Zero out Mach number of walls for MultiScale metric. — galbramc / detail
  187. Tweaks to DeltaWing MultiScale — galbramc / detail
  188. Typo — galbramc / detail
  189. Fixed bug in FunctionalBoundaryTrace_DGBR2 related to new partitioning — galbramc / detail
  190. Fixed some bugs related to new partitioning — galbramc / detail
  191. Forgot some steps in the fixes — galbramc / detail
  192. updated sansLIPAIM with consistent function signatures — galbramc / detail
  193. Reworking CG DOF ordering — galbramc / detail
  194. Added spactime diffusion option for 2D Euler with artificial viscosity — blsc / detail
  195. Updated test for new PDEEuler2D with artificial viscosity interface — blsc / detail
  196. Updated 2D CG edge numbering — galbramc / detail
  197. Added back working spacetime diffusion to euler in artificial viscosity — blsc / detail
  198. Updated 1D euler with optional spacetime diffusion — blsc / detail
  199. Changed Galerkin tag to DGAdv — ursachi / detail
  200. Added asserts to stop bad parameters using for spacetime — blsc / detail
  201. Formatting errors — blsc / detail
  202. Completely reworking CG field constructions — galbramc / detail
  203. More work on new CG Field creation — galbramc / detail
  204. Hopefully fixed intel error by extending boost::mpl::vector — blsc / detail
  205. NavierStokes2D with artificial viscosity — blsc / detail
  206. Formatting issues — blsc / detail
  207. Missed a few files — blsc / detail
  208. Formatting fix — blsc / detail
  209. Formatting fix — blsc / detail
  210. Formatting fix — blsc / detail
  211. Complete rework of CG field construction. Works in parallel now. Removed — galbramc / detail
  212. Fixed some warnings and compile errors — galbramc / detail
  213. Missing include — galbramc / detail
  214. More field initializations — galbramc / detail
  215. Slight efficiency improvement for HDG adjoint calculation — galbramc / detail
  216. Fixed another uninitialized field — galbramc / detail
  217. CG works in parallel! — galbramc / detail
  218. CG was missing boundary elements in parallel. Now it works! — galbramc / detail
  219. Fixed warning — galbramc / detail
  220. Added evalReferenceCoordinateHessian for 3D. More unit testing for — galbramc / detail
  221. Forgot some DOFs — galbramc / detail
  222. Relaxed tolerances — galbramc / detail
  223. Local solve updates — galbramc / detail
  224. Modified tolerances — galbramc / detail
  225. Remove print statements — galbramc / detail
  226. Updated 1D local solve and removed depricated test — galbramc / detail
  227. Tecplog xfld dump now includes node+cell ranks — galbramc / detail
  228. Include Galerkin integrands for DGBR2 boundary output functionals — galbramc / detail
  229. Fixed the fix — galbramc / detail
  230. Missing include — galbramc / detail
  231. fixing nightly warning — hcarson / detail
  232. changed the essential bc application to use ghost boundaries. No longer — hcarson / detail
  233. Fix for DGBR2 boundary output functionals — ursachi / detail
  234. BCEuler has vector size greater than 20 — ursachi / detail
  235. 2D DGAdvective error estimate order test — ursachi / detail
  236. Changed Nitche to Cb = 2.0 for AD CG P3 adaptation — galbramc / detail
  237. Fixing errors — ursachi / detail
  238. changed Dual to Dual2 in anticipation of the new local solve — hcarson / detail
  239. updated unit tests to use the ghost boundary trace freezing rule — hcarson / detail
  240. preparations for the alternative constructor — hcarson / detail
  241. cleanup of implied metric limiter — pcaplan / detail
  242. vera fixes — pcaplan / detail
  243. Fixing errors — ursachi / detail
  244. didn't mean to include a certain test — pcaplan / detail
  245. switching back to Dual notation, splitting the EdgeLocal and — hcarson / detail
  246. moved to ptrs in the base class, dry run for elemental version — hcarson / detail
  247. Topology instantiations and avro cmake updates — galbramc / detail
  248. Dummy push — ursachi / detail
  249. Fixed AVRO cmake typo. Minor format cleanup for limited metric. — galbramc / detail
  250. refactor to move most member variables into the base class XField_Common — hcarson / detail
  251. Forgot a file, and all non edge specific methods are now buried in the — hcarson / detail
  252. changed a template setup and added a first Element Local test — hcarson / detail
  253. Starting work on AFLR 16.26.2 — galbramc / detail
  254. new splitting routine compiles — hcarson / detail
  255. moved the split function up to Common level, made it more sophisticated — hcarson / detail
  256. Expanded the 3D split and changed the arguments for the 1D split to — hcarson / detail
  257. forgot you can't write to tmp/ — hcarson / detail
  258. find and replace bug — hcarson / detail
  259. typo in file name — hcarson / detail
  260. forgot test directory — hcarson / detail
  261. commented out some impossible branches in 2D, and added another unsplit — hcarson / detail
  262. unit tests — hcarson / detail
  263. ElementArea now calls the same actual split method as edge local — hcarson / detail
  264. added a copy constructor test, working on testing splits for Element — hcarson / detail
  265. a very first element local split test — hcarson / detail
  266. moved some memory outside of loops so it doesn't get created and — hcarson / detail
  267. unit tests for adding in new cellgroup 1 elements and traces, looks like — hcarson / detail
  268. unit test involving reattaching a cell group 1 boundary element — hcarson / detail
  269. Adding RK Riemann Problem — eam5515 / detail
  270. Various fixes to get NS GLS working in 3D — galbramc / detail
  271. Updated pyrite files for nightly testing — galbramc / detail
  272. Set longer timeout for specific long running unit tests — galbramc / detail
  273. caught the memory leak, and a bunch of instantiations and fixes and unit — hcarson / detail
  274. forgot a thing — hcarson / detail
  275. style check — hcarson / detail
  276. Added promote_Surreal for ParamTuple — galbramc / detail
  277. fixes: — hcarson / detail
  278. file renaming switches — hcarson / detail
  279. forgot to remove print out. — hcarson / detail
  280. added catch for ghost boundaries — hcarson / detail
  281. forgot file write — hcarson / detail
  282. missed a thing — hcarson / detail
  283. Don't do parallel solves yet with the new ElementDualLocal solves — galbramc / detail
  284. Added TimeOut BC for spacetime that is distinct from BCNone — blsc / detail
  285. some 4d stuff — pcaplan / detail
  286. placeholders for unit tests — pcaplan / detail
  287. Start working on latest AFLR4 — galbramc / detail
  288. Many cppcheck fixes, but not all — galbramc / detail
  289. Fixed compile error — galbramc / detail
  290. caught a ghost boundary bug, now have different bugs in parallel — hcarson / detail
  291. More work on latest AFLR4, does not work yet — galbramc / detail
  292. Updated Partiioning for CG element dual solves — galbramc / detail
  293. Relaxed tolerances on local solves — galbramc / detail
  294. Nightly fixes — galbramc / detail
  295. Upgraded PETSc version — galbramc / detail
  296. Fixed PETSc version test — galbramc / detail
  297. changed to allow Real indices for monomial — hcarson / detail
  298. added ghost tests, turned off the split ghost tests, as we don't have a — hcarson / detail
  299. Many AFLR4 updates — galbramc / detail
  300. changed some comments — hcarson / detail
  301. vim put some actual tabs in... and changing some odd pieces — hcarson / detail
  302. Another try — galbramc / detail
  303. warning about unset data — hcarson / detail
  304. Added 1D AR test file — ursachi / detail
  305. relaxing tolerance — hcarson / detail
  306. trace to cell reference coordinates (plus matlab script), — pcaplan / detail
  307. trace to cell reference coordinates (plus matlab script), — pcaplan / detail
  308. Added a tecplot dump for EGTessModel — galbramc / detail
  309. element topology tracks number of permutations so possible trace — pcaplan / detail
  310. More debugging outputs — galbramc / detail
  311. Fixes so boost xml files are correctly dumped — galbramc / detail
  312. Fixed system tests for coverage — galbramc / detail
  313. Allowed for longer run times on specific tests — galbramc / detail
  314. One more tweak for coverage of system tests — galbramc / detail
  315. Typo — galbramc / detail
  316. Missed one more — galbramc / detail
  317. Forgot to add files — galbramc / detail
  318. One more typo — galbramc / detail
  319. A slightly different version — galbramc / detail
  320. Minor fix — galbramc / detail
  321. Fixed find and replace mistake — galbramc / detail
  322. fixed a few bugs with trace-to-cell ref coordinates — pcaplan / detail
  323. hasFluxConservative is noe hasFluxAdvectiveTime — blsc / detail
  324. xfield and element definitions for pentatopes — pcaplan / detail
  325. spacetime field and element files — pcaplan / detail
  326. tolerance — hcarson / detail
  327. relaxed again — hcarson / detail
  328. field and xfield instantiations in 4d — pcaplan / detail
  329. map between quadrature points of different trace orienations (in 4d) — pcaplan / detail
  330. lingering space — pcaplan / detail
  331. unused variables...dont worry i'll unit test these functions — pcaplan / detail
  332. uninit fixes — pcaplan / detail
  333. 2D Riemann problem now uses surrogates — blsc / detail
  334. A box grid with two ghost boundaries — hcarson / detail
  335. added split tests with ghost boundaries attached to cell group 1, and — hcarson / detail
  336. duplicate test name — hcarson / detail
  337. Fixes to EGADS loop senses when sense is +/-2 — galbramc / detail
  338. Forgot a file — galbramc / detail
  339. Fixed array out-of-bounds in Pentatope basis function. Fixed memcheck — galbramc / detail
  340. Speed improvement for stabilized CG. 3DNS isothermal wall BC. Many other — galbramc / detail
  341. More robust jacobian check for CG Stabilized NS — galbramc / detail
  342. changed DOF sharing calculations to correctly use max, and to calculate — hcarson / detail
  343. Relaxed tolerance — galbramc / detail
  344. Fixed adjoint order error — ursachi / detail
  345. Check if error estimates are the same after several iterations — ursachi / detail
  346. 2D DGAdv error estimate order test — ursachi / detail
  347. moved the hard work split method into the common instantiation — hcarson / detail
  348. fixing up the 3D logic a little bit, the edge local still works, need to — hcarson / detail
  349. unsplit element dual tests — hcarson / detail
  350. Fixed warnings — galbramc / detail
  351. first, extremely basic split test — hcarson / detail
  352. another simple split test, now with reattaching boundary groups attached — hcarson / detail
  353. duplicate named tests — hcarson / detail
  354. some tests for ElementDual Solution transfer, no surprises — hcarson / detail
  355. duplicate test names — hcarson / detail
  356. Reworkd DOF sync so Newton syncs zombies. Linear solver timings — galbramc / detail
  357. Missed one — galbramc / detail
  358. Forgot to add timing variable for MKL_PARDISO — galbramc / detail
  359. Copy pasta — galbramc / detail
  360. added scaling and offest to TripleBL and changed naming convention to — hcarson / detail
  361. forgot the pattern update — hcarson / detail
  362. New parallel unit tests. Ghost/Zombie DOFs synced in Newton. PETSc build — galbramc / detail
  363. various changes to get 3D adapting — hcarson / detail
  364. a 3D CG adaptation! — hcarson / detail
  365. changes to 3D case to run on hypersonic — hcarson / detail
  366. Missing include — galbramc / detail
  367. to run a big case — hcarson / detail
  368. Updates for latest AFLR patches — galbramc / detail
  369. Custom build of gcc 8.2 — galbramc / detail
  370. Jenkims env fix for gcc8 — galbramc / detail
  371. Adding new RK unit test — eam5515 / detail
  372. Adding Complete RK unit test and new CMake list — eam5515 / detail
  373. AFLR4 now works. Need new library release. — galbramc / detail
  374. Cleanup RK Parallel Serial test. Have not found the bug yet. — galbramc / detail
  375. Fixes so RK works with new parallel paritioning — galbramc / detail
  376. Assert Galerkin Stabilized PDE fluxViscousLinearInGradient. Add CMake — galbramc / detail
  377. commiting a bunch of non-working tests and the 3D CG case. — hcarson / detail
  378. More updates for AFLR4 — galbramc / detail
  379. CG Field constructor minor speed improvements. Nightly tolerances. — galbramc / detail
  380. refactor to remove additional unneeded fields, should reduce the — hcarson / detail
  381. Improved the speed of CG Field constructors. Should help local solves. — galbramc / detail
  382. Minor fixes — galbramc / detail
  383. Upgraded cppcheck on reynolds — galbramc / detail
  384. A few more minor speed improvements to Galerkin error estimates. — galbramc / detail
  385. xfielddomain fixes for avro api changes — pcaplan / detail
  386. unit test fixes for avro changes — pcaplan / detail
  387. some unit testing on polytopes — pcaplan / detail
  388. push to mac for IMR — pcaplan / detail
  389. Fixed bug when parallelizing nodal metrics — galbramc / detail
  390. Fix for MultiScale metric — galbramc / detail
  391. moved integrand construction outside of loops for speed — hcarson / detail
  392. caught bug with assignment rather than accumulation — hcarson / detail
  393. that speed up didn't work.... — hcarson / detail
  394. added get options for orientation, and caught bug with invalid split — hcarson / detail
  395. added a check to see if element is owned by local processor — hcarson / detail
  396. unused variable — hcarson / detail
  397. Suppress cppcheck — galbramc / detail
  398. another unit test — hcarson / detail
  399. Added requested element print out. Fixed int for computing cost. — galbramc / detail
  400. some more unit tests and caught a bug — hcarson / detail
  401. Better CG load balancing. PETSc BAIJ works for processors with no DOF — galbramc / detail
  402. Fix for error estimate nodal outputField — galbramc / detail
  403. added dictionary options for SineSineSine — hcarson / detail
  404. hunting some int casts — hcarson / detail
  405. bumping that coverage up — hcarson / detail
  406. 3D Element Dual test — hcarson / detail
  407. tweak — hcarson / detail
  408. Added mach output functional for DeltaWing — galbramc / detail
  409. Started to rework cmake folder test names — galbramc / detail
  410. forgot a dictionary — hcarson / detail
  411. Added mach field dump for MOESS delta wing — galbramc / detail
  412. New folder test names. We can revert/modify if they are awkward — galbramc / detail
  413. Missed XDIR related things — galbramc / detail
  414. dictionary fixes and parameter tweaks — hcarson / detail
  415. more dictionary fixes — hcarson / detail
  416. Periodic boundary support for gmsh reader — blsc / detail
  417. reduced test size — hcarson / detail
  418. Updates so refine might work in parallel — galbramc / detail
  419. Updated refine check with cmake — galbramc / detail
  420. shortened test again... — hcarson / detail
  421. Fixes for DeltaWing to dump mach field — galbramc / detail
  422. Removed deformationTime.dat — galbramc / detail
  423. PETSc uses x as initial guess. Use P-Adjoint as initial P+1-Adjoing with — galbramc / detail
  424. Clean up adjoint solve for DeltaWing — galbramc / detail
  425. Don't run refine in parallel yet — galbramc / detail
  426. changing to unstabilized for testing — hcarson / detail
  427. tweaks and removing an unintended file — hcarson / detail
  428. basic scheduler and timing dumps at the end of test adapthist — hcarson / detail
  429. Periodic gmsh fix for parallel — blsc / detail
  430. moving box — hcarson / detail
  431. mend — hcarson / detail
  432. moving box — hcarson / detail
  433. forgot to allow PETSC — hcarson / detail
  434. JacobianFunctionalCell_Galerkin now works in parallel. Other small — galbramc / detail
  435. changed to copy construction — hcarson / detail
  436. Missed a solution initialization for PETSc — galbramc / detail
  437. Added parallel interfac to XField_Lagrange. — galbramc / detail
  438. Updated XField3D_refine so it hopefully works in parallel — galbramc / detail
  439. work towards calling avro from parallel SANS — pcaplan / detail
  440. refine API now works in parallel — galbramc / detail
  441. Don't allocate P and P+1 jacobian at the same time for Galerkin — galbramc / detail
  442. Forgot some files — galbramc / detail
  443. Various fixes — galbramc / detail
  444. More informative error messages — galbramc / detail
  445. One more fix for parallel grid creation — galbramc / detail
  446. Typo — galbramc / detail
  447. More robust EPIC call interface. Improved refine build. — galbramc / detail
  448. Fixed memory leak — galbramc / detail
  449. More robust system call to refine — galbramc / detail
  450. might Edge local work? — hcarson / detail
  451. running a 3D CG adapt in parallel! — hcarson / detail
  452. forgot to actually use the scheduler — hcarson / detail
  453. Precondition adjoint P+1 solve with adjoint P solve for DGBR2 — galbramc / detail
  454. Forgot some files — galbramc / detail
  455. Wroking on L2 projections. Various fixes — galbramc / detail
  456. Fixes for L2 projection cases — galbramc / detail
  457. Typo — galbramc / detail
  458. added a targetCost scheduler — hcarson / detail
  459. unused variable and style fixes — hcarson / detail
  460. maintain same list of lower-dim egads entities for parallel — pcaplan / detail
  461. avro interface for delta wing case — pcaplan / detail
  462. Minor cleanup — galbramc / detail
  463. Fixes for running avro in parallel — galbramc / detail
  464. merge conflict — pcaplan / detail
  465. boundary conditions in the correct order... — pcaplan / detail
  466. xfielddomain constructor when sans_avro not defined, warning fixes — pcaplan / detail
  467. lingering comma — pcaplan / detail
  468. forgot to comment some testing things that dont work — pcaplan / detail
  469. Various fixes to refine. L2 CG projection works in parallel — galbramc / detail
  470. Fixes for refine. L2 cases to run for paper. — galbramc / detail
  471. Fixed warnings — galbramc / detail
  472. Using DirectLU for DeltaWing adjoint — galbramc / detail
  473. mods to avro interface, added Curved parameter to omit visiblity checks — pcaplan / detail
  474. Various fixes to refine interface and AD L2 cases. — galbramc / detail
  475. Added mlarocca@mit.edu to DeveloperEmailAddresses — mlarocca / detail
  476. Updates for latest fefloa — galbramc / detail
  477. lagrange basis function on pentatopes with unit tests — pcaplan / detail
  478. change to avro interface — pcaplan / detail
  479. All kinds of fixes — galbramc / detail
  480. 4d instantiations, still undefined refs with field & element — pcaplan / detail
  481. Fixed warnings/errors — galbramc / detail
  482. un-instantiated so i can test some things, previous push had wrong — pcaplan / detail
  483. premerge — pcaplan / detail
  484. missing instantiations, fixing a few undef references — pcaplan / detail
  485. Relaxed tolerance — galbramc / detail
  486. Unified robuster system call function — galbramc / detail
  487. Fix mistakes I made related to label in XFieldDomain — galbramc / detail
  488. Fixed analyzer warnings — galbramc / detail
  489. prelim kuhn-freudenthal triangulation via avro — pcaplan / detail
  490. Upgraded builds to latest NLOPT and PETSc. — galbramc / detail
  491. lagrange DOF map & trace2cellrefcoord + unit tests — pcaplan / detail
  492. lagrange dof map testing — pcaplan / detail
  493. Fixes for latest AFLR — galbramc / detail
  494. Updates for L2 projection cases — galbramc / detail
  495. Indexing bug — galbramc / detail
  496. re-order lattice coordinates so we have canonical vertices first — pcaplan / detail
  497. moved eigenvalue calculation to impl + unit tests for 4x4 — pcaplan / detail
  498. spacetime element associativity + unit tests — pcaplan / detail
  499. Added Triple BL to the MultiScale test — galbramc / detail
  500. normal of tet in 4d via svd — pcaplan / detail
  501. finish implementation of tet normal in 4d — pcaplan / detail
  502. elementxfieldspacetime jacobian + volume + unit tests — pcaplan / detail
  503. constructed a 4d xfield! — pcaplan / detail
  504. wrap kuhn freudenthal triangulation around SANS_AVRO ifdef — pcaplan / detail
  505. still cant remember how to trigger dummy commit... — pcaplan / detail
  506. and again... — pcaplan / detail
  507. trailing whitespace — pcaplan / detail
  508. Tweak to refine build — galbramc / detail
  509. Bumped up timing more for Hex Lagrange Cache test — galbramc / detail
  510. Added L2 Projection solver interface — galbramc / detail
  511. git jenkins not working...dummy commit — pcaplan / detail
  512. Added CG for L2Projection — galbramc / detail
  513. Missing include — galbramc / detail
  514. change case — pcaplan / detail
  515. element ridge (TopoDim-2 elements) needed to construct 4d elems — pcaplan / detail
  516. xfielddomain holds ego children not SANS::EGObject, reason is because — pcaplan / detail
  517. instantiations for 4d target metric matching — pcaplan / detail
  518. CG field construction for TopoD4 meshes, tested on p=1 — pcaplan / detail
  519. target metric matching in 4d sandbox — pcaplan / detail
  520. element ridge unit test + equilateral pentatope jacobian — pcaplan / detail
  521. fixed bug with equilateral pentatope jacobian + matlab script + unit — pcaplan / detail
  522. Fix typo — galbramc / detail
  523. field element pentatope tests — pcaplan / detail
  524. debugging costmodel_logeuclidean on topoD4 ping tests — pcaplan / detail
  525. brace alignment — pcaplan / detail
  526. uncomment xfieldspacetime_pentatope tests until actually implemented — pcaplan / detail
  527. unused defs — pcaplan / detail
  528. undefined references without avro — pcaplan / detail
  529. sign compare — pcaplan / detail
  530. missing file to compile — pcaplan / detail
  531. lingering comma — pcaplan / detail
  532. ridge -> frame — pcaplan / detail
  533. undef references — pcaplan / detail
  534. commit deleted files — pcaplan / detail
  535. wrap ifdef SANS_AVRO further ahead — pcaplan / detail
  536. omit spacetime pentatope btest from memcheck because it takes a long — pcaplan / detail
  537. instantiate matrixsyms4 projection for tets — pcaplan / detail
  538. basis function instantiate — pcaplan / detail
  539. matmul instantiation — pcaplan / detail
  540. reduced number of orientations to make elementspacetime_pentatope test — pcaplan / detail
  541. Remove maybe uninitialized wanrings on gnu 8 — galbramc / detail
  542. last instantiation i promise — pcaplan / detail
  543. bug in cost model log-euclidean test because of the vertex/step matrix — pcaplan / detail
  544. seriously this has to be the last one — pcaplan / detail
  545. last one! — pcaplan / detail
  546. trigger commit — pcaplan / detail
  547. up to p=2 for element space time test because it's really slow — pcaplan / detail
  548. Added json parser to PyDict — galbramc / detail
  549. Lots of refactoring of AFLR4 and sansLIPAIM. All seems to be — galbramc / detail
  550. Minor fix — galbramc / detail
  551. Tweak to how AFLR is found — galbramc / detail
  552. Fixed compile error — galbramc / detail
  553. Update minimum boost version to 1.50 due to bug in property_tree json — galbramc / detail
  554. Merged AFLR4 test into EGTessModel — galbramc / detail
  555. More extensive try with sansLIPAIM — galbramc / detail
  556. Most sansLIP updates — galbramc / detail
  557. Fix MKL_PARDISO for transpose solves. Bug fix for AFLR3 — galbramc / detail
  558. Use static MKL libraries due to python issues — galbramc / detail
  559. Don't statically link in the ld library — galbramc / detail
  560. Increased timout time for HDG test — galbramc / detail
  561. Realzed timing on another test — galbramc / detail
  562. push to hypersonic — pcaplan / detail
  563. Separate list of MKL static libraries — galbramc / detail
  564. Always link in MKL statically with sansLIPAIM — galbramc / detail
  565. Moved error message for sansLIP — galbramc / detail
  566. Building mpi all_reduce into FunctionalCell_Galerkin — galbramc / detail
  567. Added missing includes — galbramc / detail
  568. Fixed uninitialized data in Flux_mitState_Nitsche for pure advective. — galbramc / detail
  569. Removed variable length arrays — galbramc / detail
  570. Missed a few variable length arrays — galbramc / detail
  571. One more warning — galbramc / detail
  572. Fixed warnings — galbramc / detail
  573. Better cleanup of coverage information — galbramc / detail
  574. Don't build sandbox with nightly — galbramc / detail
  575. Clang analyzer should still build sandbox — galbramc / detail
  576. Revived gradation penalty. Needs lots of tweaks and studying — galbramc / detail
  577. Updates for latest version of AFLR — galbramc / detail
  578. Gradation still needs more work... — galbramc / detail
  579. Fix compiler error — galbramc / detail
  580. Fixed arry bound typo in test — galbramc / detail
  581. more tests for orientations of tets in 4d — pcaplan / detail
  582. lingering changes — pcaplan / detail
  583. DG fields in 4d + unit tests — pcaplan / detail
  584. silly typo — pcaplan / detail
  585. can only use KF triangulation if avro is hooked in — pcaplan / detail
  586. Udpates to sansLIPAIM to work with new CAPS dataTransfer setup — galbramc / detail
  587. system test for DG with pentatopes — pcaplan / detail
  588. use SANS convention for trace orientation instead of the one used in — pcaplan / detail

#230 (Dec 1, 2018, 1:52:12 AM)

  1. Added H tensor output from Euler2D — blsc / detail
  2. Working on new AFLR4 interface — galbramc / detail
  3. some tweaks — hcarson / detail
  4. tweaks — hcarson / detail
  5. Debugging AFLR4 — galbramc / detail
  6. removing erroneous refine things — hcarson / detail
  7. getting acdl develop CMakeIncludes — hcarson / detail
  8. more tweaks — hcarson / detail
  9. moving to hypersonic — hcarson / detail
  10. change to let MPI build the directories just in time — hcarson / detail
  11. too many white lines — hcarson / detail
  12. to run on devastator — hcarson / detail
  13. tweaks for hypersonic — hcarson / detail
  14. Nodal Error estimate. Takes the average of the attached nodes, the — hcarson / detail
  15. hacking about trying Nodal Estimation — hcarson / detail
  16. typo/bug maybe? — hcarson / detail
  17. another one — hcarson / detail
  18. pre merge — hcarson / detail
  19. Multiscale metric case, debugging printing a continuous Mach number — hcarson / detail
  20. pre merge — hcarson / detail
  21. forgot to assert the basis was the same for the two fields — hcarson / detail
  22. projects from the Dfld basis onto the Cfld basis so accumulating to the — hcarson / detail
  23. pre merge — hcarson / detail
  24. seems to write Mach number solbs now — hcarson / detail
  25. moving to hypersonic — hcarson / detail
  26. a fix to go to hypersonic — hcarson / detail
  27. weird tecplot bug — hcarson / detail
  28. compiles again, moving to devastator — hcarson / detail
  29. MultiScaleMetric for transfering to NASA — hcarson / detail
  30. moving to laptop — hcarson / detail
  31. transfering to Dev — hcarson / detail
  32. moving to devastator to get EPIC — hcarson / detail
  33. --ammend — hcarson / detail
  34. moving to devastator — hcarson / detail
  35. transfering to dev — hcarson / detail
  36. moving to hyper — hcarson / detail
  37. pre merge — hcarson / detail
  38. tweak — hcarson / detail
  39. added output dump info to MultiScaleMetric case, should be ready to — hcarson / detail
  40. making MultiScale and MOESS cases consistent and ready for hypersonic — hcarson / detail
  41. tweaks back to labbox — hcarson / detail
  42. Updates for edge based AFLR4 calculations — galbramc / detail
  43. Backwards facing step unit grid — hcarson / detail
  44. pre merge commit — hcarson / detail
  45. backwards step cases — hcarson / detail
  46. removed SolverInterface_Nodal_Galerkin, it ended up only a tiny tweak — hcarson / detail
  47. added options for tweaking order of the tau stabilization. Can force the — hcarson / detail
  48. added Arthur's version of Experimental, copied from his email — hcarson / detail
  49. preprocessor defined version with volume weighting, ought to remove this — hcarson / detail
  50. forgot the CMakeLists — hcarson / detail
  51. DG case updates — hcarson / detail
  52. nodal test passes again — hcarson / detail
  53. pre merge — hcarson / detail
  54. moving back to nia — hcarson / detail
  55. moving to dev — hcarson / detail
  56. tweaks to case — hcarson / detail
  57. pre merge — hcarson / detail
  58. moving to dev — hcarson / detail
  59. pre merge — hcarson / detail
  60. added an argument for fixing the order used in the calculation of tau. — hcarson / detail
  61. mod solution fcn — arthuang / detail
  62. moving to dev — hcarson / detail
  63. moving to dev — hcarson / detail
  64. 2D refine interface, it doesn't work yet — hcarson / detail
  65. hacks to move to NASA box — hcarson / detail
  66. went back to nNodes for advective stabilization — arthuang / detail
  67. changed to all take order of stabilization as argument to stab — hcarson / detail
  68. diff got lost in the merge, and a line too long — hcarson / detail
  69. forgot the refine preprocessor bits, and a curly brace was one space — hcarson / detail
  70. vera fixes — hcarson / detail
  71. forgot another one — hcarson / detail
  72. tweaks for jenkins — hcarson / detail
  73. curly braces again — hcarson / detail
  74. fixed coarsening node numbering bug, added a unit test to guard it — hcarson / detail
  75. forgot some things — hcarson / detail
  76. fixed warning about unread data — hcarson / detail
  77. modified stabilized output, reverted to node based advection — arthuang / detail
  78. sandbox, added high order quads to PX mesh reader, fixed periodic bug in — jzavala / detail
  79. Removed tabs from files in previous commit. — jzavala / detail
  80. stabilization consistent and passing unit tests. updated nitsche — arthuang / detail
  81. Fixed curly brackets formatting in previous commit's files. — jzavala / detail
  82. Minor cleanup — galbramc / detail
  83. Fixed continuous-param assumption for fluxViscous — blsc / detail
  84. Unit tests passing with param bug fix — blsc / detail
  85. Fixed a nightly warning — galbramc / detail
  86. 1D spacetime shock problems — blsc / detail
  87. Formatting errors — blsc / detail
  88. More bug fix — blsc / detail
  89. Adding hinge computation from CSM. Other minor cleanup. — galbramc / detail
  90. testing with avro — pcaplan / detail
  91. Forward facing step unit grid and spacetime euler2d artificial viscosity — blsc / detail
  92. Turned off some debug output — blsc / detail
  93. PETSc option for spacetime forward facing step — blsc / detail
  94. Work towards Zombie DOFs — galbramc / detail
  95. Updates for LIP solver to use hinge lines — galbramc / detail
  96. Fixed inconsistency in LIPSolver sensitivity — galbramc / detail
  97. Fixed PETSc setup in step case — blsc / detail
  98. Unit test for forward facing step grid — blsc / detail
  99. New Euler BC unit tests — blsc / detail
  100. Fixed index bug for Zombies — galbramc / detail
  101. Tweak for building tetgen with MSYS — galbramc / detail
  102. Added system call option for refine — galbramc / detail
  103. Maybe BDF case for forward facing step — blsc / detail
  104. Updates for calling refine with a system call — galbramc / detail
  105. More refine fixes — galbramc / detail
  106. One more refine fix. And some sansLIPAIM fixes. — galbramc / detail
  107. Missing include — galbramc / detail
  108. Correct missing include — galbramc / detail
  109. Minor fix — galbramc / detail
  110. Made the volume generator option for sansLIP. — galbramc / detail
  111. Default meshesr for sansLIP — galbramc / detail
  112. Added Lagrange-basis duct mesh creator and corresponding sandbox test — jzavala / detail
  113. Working on a bug in sansLIPAIM — galbramc / detail
  114. sansLIPAIM fix — galbramc / detail
  115. Fixed sansLIP data transfer with hinge bodies — galbramc / detail
  116. Fixed formatting errors. — jzavala / detail
  117. moess to minimize distance between implied metric and target field — pcaplan / detail
  118. move to new branch — pcaplan / detail
  119. a few (very simple) pentatope things — pcaplan / detail
  120. metric optimisation to match target metric — pcaplan / detail
  121. delete bad stuff — pcaplan / detail
  122. Fixed more formatting errors. — jzavala / detail
  123. Renamed duct mesh generator header and source files and edited — jzavala / detail
  124. testing with metric optimizer, will definitely fail jenkins — pcaplan / detail
  125. forgot to remove cmake add_subdir for my sandbox, will gitignore — pcaplan / detail
  126. vera fixes, missing file — pcaplan / detail
  127. try to fix invalid initializations — pcaplan / detail
  128. Renamed the duct mesher file mentioned inside CMakeLists.txt — jzavala / detail
  129. removed the rfld dumping as it doesn't work in parallel — hcarson / detail
  130. changed monomial to accept reals, added a 1D L2Projection toy — hcarson / detail
  131. changed monomial to accept reals, added a 1D L2Projection toy — hcarson / detail
  132. sandbox edits — arthuang / detail
  133. revert sandbox not working — arthuang / detail
  134. Added Pseudo Time solving to DGAdvective Smoothbump toy. — jzavala / detail
  135. Cleaned up duct mesh generator files. — jzavala / detail
  136. Added arc mesh generator and corresponding toy test file. Updated — jzavala / detail
  137. Various fixes for LIP AIM — galbramc / detail
  138. Relaxed unit test timing a bit more — galbramc / detail
  139. relax tol — arthuang / detail
  140. Renamed arc mesh generator files to annulus. Minor changes elsewhere. — jzavala / detail
  141. Minor change. — jzavala / detail
  142. Minor fixes. — jzavala / detail
  143. branch change — hcarson / detail
  144. Removed non-determinstic wake intersection — galbramc / detail
  145. Fixed compile errors — galbramc / detail
  146. Another compile problem — galbramc / detail
  147. Undo — galbramc / detail
  148. Lots of work towards Zombies — galbramc / detail
  149. Forgot a file — galbramc / detail
  150. Fixed compile error — galbramc / detail
  151. Added sansLIPAIM to jenkins compile — galbramc / detail
  152. Hopefully fixed local2native DG indexing — galbramc / detail
  153. Fix for zombie counting — galbramc / detail
  154. Higher-resolution ShuOsher case — blsc / detail
  155. added order and power runtime flags — hcarson / detail
  156. tweaks to case and considering a different stabilization — hcarson / detail
  157. Q1D Adaptive Giles Pierce nozzle with p-sequencing — ursachi / detail
  158. Added supersonic outflow BC — ursachi / detail
  159. Created grid and test case for adaptive 2D Giles Pierce nozzle — ursachi / detail
  160. working on a new tau and moving some stuff to dev — hcarson / detail
  161. allowing command line spec — hcarson / detail
  162. VMS seems to be adapting properlygit status! — hcarson / detail
  163. conflicts — hcarson / detail
  164. typo — hcarson / detail
  165. changing back to nDOF — hcarson / detail
  166. testing theory on linear basis for tau — hcarson / detail
  167. reverting to develop — hcarson / detail
  168. tool to guide mesh generator towards target metric from implied one — pcaplan / detail
  169. changes to Experimental2, gives p order scaling stabilization now — hcarson / detail
  170. changes to Experimental2, gives p order scaling stabilization now — hcarson / detail
  171. Changes to help converge forward facing step — blsc / detail
  172. DG field now includes zombies — galbramc / detail
  173. Minor fix — galbramc / detail
  174. tweaks — hcarson / detail
  175. fix to SolverInterface, and changes to NSFlat Plate — hcarson / detail
  176. using Exp not Exp2 as missing some instanations for LinAlg. — hcarson / detail
  177. Added missing include — galbramc / detail
  178. Need to remove LocalSolve2D_DGBR2_Triangle_AD_btest — galbramc / detail
  179. Proper parallel DGBR2 LocalSolve — galbramc / detail
  180. Reduce runtime for ElementLocalSolve3D_DGBR2_Tet_AD_btest — galbramc / detail
  181. Reduced number of partitions for — galbramc / detail
  182. Various fixes — galbramc / detail
  183. Added libMeshb solution reader — galbramc / detail
  184. Reworked multiscale metric so it mostly works — galbramc / detail
  185. Minor fixes — galbramc / detail
  186. Fix link error. Zero out Mach number of walls for MultiScale metric. — galbramc / detail
  187. Tweaks to DeltaWing MultiScale — galbramc / detail
  188. Typo — galbramc / detail
  189. Fixed bug in FunctionalBoundaryTrace_DGBR2 related to new partitioning — galbramc / detail
  190. Fixed some bugs related to new partitioning — galbramc / detail
  191. Forgot some steps in the fixes — galbramc / detail
  192. updated sansLIPAIM with consistent function signatures — galbramc / detail
  193. Reworking CG DOF ordering — galbramc / detail
  194. Added spactime diffusion option for 2D Euler with artificial viscosity — blsc / detail
  195. Updated test for new PDEEuler2D with artificial viscosity interface — blsc / detail
  196. Updated 2D CG edge numbering — galbramc / detail
  197. Added back working spacetime diffusion to euler in artificial viscosity — blsc / detail
  198. Updated 1D euler with optional spacetime diffusion — blsc / detail
  199. Changed Galerkin tag to DGAdv — ursachi / detail
  200. Added asserts to stop bad parameters using for spacetime — blsc / detail
  201. Formatting errors — blsc / detail
  202. Completely reworking CG field constructions — galbramc / detail
  203. More work on new CG Field creation — galbramc / detail
  204. Hopefully fixed intel error by extending boost::mpl::vector — blsc / detail
  205. NavierStokes2D with artificial viscosity — blsc / detail
  206. Formatting issues — blsc / detail
  207. Missed a few files — blsc / detail
  208. Formatting fix — blsc / detail
  209. Formatting fix — blsc / detail
  210. Formatting fix — blsc / detail
  211. Complete rework of CG field construction. Works in parallel now. Removed — galbramc / detail
  212. Fixed some warnings and compile errors — galbramc / detail
  213. Missing include — galbramc / detail
  214. More field initializations — galbramc / detail
  215. Slight efficiency improvement for HDG adjoint calculation — galbramc / detail
  216. Fixed another uninitialized field — galbramc / detail
  217. CG works in parallel! — galbramc / detail
  218. CG was missing boundary elements in parallel. Now it works! — galbramc / detail
  219. Fixed warning — galbramc / detail
  220. Added evalReferenceCoordinateHessian for 3D. More unit testing for — galbramc / detail
  221. Forgot some DOFs — galbramc / detail
  222. Relaxed tolerances — galbramc / detail
  223. Local solve updates — galbramc / detail
  224. Modified tolerances — galbramc / detail
  225. Remove print statements — galbramc / detail
  226. Updated 1D local solve and removed depricated test — galbramc / detail
  227. Tecplog xfld dump now includes node+cell ranks — galbramc / detail
  228. Include Galerkin integrands for DGBR2 boundary output functionals — galbramc / detail
  229. Fixed the fix — galbramc / detail
  230. Missing include — galbramc / detail
  231. fixing nightly warning — hcarson / detail
  232. changed the essential bc application to use ghost boundaries. No longer — hcarson / detail
  233. Fix for DGBR2 boundary output functionals — ursachi / detail
  234. BCEuler has vector size greater than 20 — ursachi / detail
  235. 2D DGAdvective error estimate order test — ursachi / detail
  236. Changed Nitche to Cb = 2.0 for AD CG P3 adaptation — galbramc / detail
  237. Fixing errors — ursachi / detail
  238. changed Dual to Dual2 in anticipation of the new local solve — hcarson / detail
  239. updated unit tests to use the ghost boundary trace freezing rule — hcarson / detail
  240. preparations for the alternative constructor — hcarson / detail
  241. cleanup of implied metric limiter — pcaplan / detail
  242. vera fixes — pcaplan / detail
  243. Fixing errors — ursachi / detail
  244. didn't mean to include a certain test — pcaplan / detail
  245. switching back to Dual notation, splitting the EdgeLocal and — hcarson / detail
  246. moved to ptrs in the base class, dry run for elemental version — hcarson / detail
  247. Topology instantiations and avro cmake updates — galbramc / detail
  248. Dummy push — ursachi / detail
  249. Fixed AVRO cmake typo. Minor format cleanup for limited metric. — galbramc / detail
  250. refactor to move most member variables into the base class XField_Common — hcarson / detail
  251. Forgot a file, and all non edge specific methods are now buried in the — hcarson / detail
  252. changed a template setup and added a first Element Local test — hcarson / detail
  253. Starting work on AFLR 16.26.2 — galbramc / detail
  254. new splitting routine compiles — hcarson / detail
  255. moved the split function up to Common level, made it more sophisticated — hcarson / detail
  256. Expanded the 3D split and changed the arguments for the 1D split to — hcarson / detail
  257. forgot you can't write to tmp/ — hcarson / detail
  258. find and replace bug — hcarson / detail
  259. typo in file name — hcarson / detail
  260. forgot test directory — hcarson / detail
  261. commented out some impossible branches in 2D, and added another unsplit — hcarson / detail
  262. unit tests — hcarson / detail
  263. ElementArea now calls the same actual split method as edge local — hcarson / detail
  264. added a copy constructor test, working on testing splits for Element — hcarson / detail
  265. a very first element local split test — hcarson / detail
  266. moved some memory outside of loops so it doesn't get created and — hcarson / detail
  267. unit tests for adding in new cellgroup 1 elements and traces, looks like — hcarson / detail
  268. unit test involving reattaching a cell group 1 boundary element — hcarson / detail
  269. Adding RK Riemann Problem — eam5515 / detail
  270. Various fixes to get NS GLS working in 3D — galbramc / detail
  271. Updated pyrite files for nightly testing — galbramc / detail
  272. Set longer timeout for specific long running unit tests — galbramc / detail
  273. caught the memory leak, and a bunch of instantiations and fixes and unit — hcarson / detail
  274. forgot a thing — hcarson / detail
  275. style check — hcarson / detail
  276. Added promote_Surreal for ParamTuple — galbramc / detail
  277. fixes: — hcarson / detail
  278. file renaming switches — hcarson / detail
  279. forgot to remove print out. — hcarson / detail
  280. added catch for ghost boundaries — hcarson / detail
  281. forgot file write — hcarson / detail
  282. missed a thing — hcarson / detail
  283. Don't do parallel solves yet with the new ElementDualLocal solves — galbramc / detail
  284. Added TimeOut BC for spacetime that is distinct from BCNone — blsc / detail
  285. some 4d stuff — pcaplan / detail
  286. placeholders for unit tests — pcaplan / detail
  287. Start working on latest AFLR4 — galbramc / detail
  288. Many cppcheck fixes, but not all — galbramc / detail
  289. Fixed compile error — galbramc / detail
  290. caught a ghost boundary bug, now have different bugs in parallel — hcarson / detail
  291. More work on latest AFLR4, does not work yet — galbramc / detail
  292. Updated Partiioning for CG element dual solves — galbramc / detail
  293. Relaxed tolerances on local solves — galbramc / detail
  294. Nightly fixes — galbramc / detail
  295. Upgraded PETSc version — galbramc / detail
  296. Fixed PETSc version test — galbramc / detail
  297. changed to allow Real indices for monomial — hcarson / detail
  298. added ghost tests, turned off the split ghost tests, as we don't have a — hcarson / detail
  299. Many AFLR4 updates — galbramc / detail
  300. changed some comments — hcarson / detail
  301. vim put some actual tabs in... and changing some odd pieces — hcarson / detail
  302. Another try — galbramc / detail
  303. warning about unset data — hcarson / detail
  304. Added 1D AR test file — ursachi / detail
  305. relaxing tolerance — hcarson / detail
  306. trace to cell reference coordinates (plus matlab script), — pcaplan / detail
  307. trace to cell reference coordinates (plus matlab script), — pcaplan / detail
  308. Added a tecplot dump for EGTessModel — galbramc / detail
  309. element topology tracks number of permutations so possible trace — pcaplan / detail
  310. More debugging outputs — galbramc / detail
  311. Fixes so boost xml files are correctly dumped — galbramc / detail
  312. Fixed system tests for coverage — galbramc / detail
  313. Allowed for longer run times on specific tests — galbramc / detail
  314. One more tweak for coverage of system tests — galbramc / detail
  315. Typo — galbramc / detail
  316. Missed one more — galbramc / detail
  317. Forgot to add files — galbramc / detail
  318. One more typo — galbramc / detail
  319. A slightly different version — galbramc / detail
  320. Minor fix — galbramc / detail
  321. Fixed find and replace mistake — galbramc / detail
  322. fixed a few bugs with trace-to-cell ref coordinates — pcaplan / detail
  323. hasFluxConservative is noe hasFluxAdvectiveTime — blsc / detail
  324. xfield and element definitions for pentatopes — pcaplan / detail
  325. spacetime field and element files — pcaplan / detail
  326. tolerance — hcarson / detail
  327. relaxed again — hcarson / detail
  328. field and xfield instantiations in 4d — pcaplan / detail
  329. map between quadrature points of different trace orienations (in 4d) — pcaplan / detail
  330. lingering space — pcaplan / detail
  331. unused variables...dont worry i'll unit test these functions — pcaplan / detail
  332. uninit fixes — pcaplan / detail
  333. 2D Riemann problem now uses surrogates — blsc / detail
  334. A box grid with two ghost boundaries — hcarson / detail
  335. added split tests with ghost boundaries attached to cell group 1, and — hcarson / detail
  336. duplicate test name — hcarson / detail
  337. Fixes to EGADS loop senses when sense is +/-2 — galbramc / detail
  338. Forgot a file — galbramc / detail
  339. Fixed array out-of-bounds in Pentatope basis function. Fixed memcheck — galbramc / detail
  340. Speed improvement for stabilized CG. 3DNS isothermal wall BC. Many other — galbramc / detail
  341. More robust jacobian check for CG Stabilized NS — galbramc / detail
  342. changed DOF sharing calculations to correctly use max, and to calculate — hcarson / detail
  343. Relaxed tolerance — galbramc / detail
  344. Fixed adjoint order error — ursachi / detail
  345. Check if error estimates are the same after several iterations — ursachi / detail
  346. 2D DGAdv error estimate order test — ursachi / detail
  347. moved the hard work split method into the common instantiation — hcarson / detail
  348. fixing up the 3D logic a little bit, the edge local still works, need to — hcarson / detail
  349. unsplit element dual tests — hcarson / detail
  350. Fixed warnings — galbramc / detail
  351. first, extremely basic split test — hcarson / detail
  352. another simple split test, now with reattaching boundary groups attached — hcarson / detail
  353. duplicate named tests — hcarson / detail
  354. some tests for ElementDual Solution transfer, no surprises — hcarson / detail
  355. duplicate test names — hcarson / detail
  356. Reworkd DOF sync so Newton syncs zombies. Linear solver timings — galbramc / detail
  357. Missed one — galbramc / detail
  358. Forgot to add timing variable for MKL_PARDISO — galbramc / detail
  359. Copy pasta — galbramc / detail
  360. added scaling and offest to TripleBL and changed naming convention to — hcarson / detail
  361. forgot the pattern update — hcarson / detail
  362. New parallel unit tests. Ghost/Zombie DOFs synced in Newton. PETSc build — galbramc / detail
  363. various changes to get 3D adapting — hcarson / detail
  364. a 3D CG adaptation! — hcarson / detail
  365. changes to 3D case to run on hypersonic — hcarson / detail
  366. Missing include — galbramc / detail
  367. to run a big case — hcarson / detail
  368. Updates for latest AFLR patches — galbramc / detail
  369. Custom build of gcc 8.2 — galbramc / detail
  370. Jenkims env fix for gcc8 — galbramc / detail
  371. Adding new RK unit test — eam5515 / detail
  372. Adding Complete RK unit test and new CMake list — eam5515 / detail
  373. AFLR4 now works. Need new library release. — galbramc / detail
  374. Cleanup RK Parallel Serial test. Have not found the bug yet. — galbramc / detail
  375. Fixes so RK works with new parallel paritioning — galbramc / detail
  376. Assert Galerkin Stabilized PDE fluxViscousLinearInGradient. Add CMake — galbramc / detail
  377. commiting a bunch of non-working tests and the 3D CG case. — hcarson / detail
  378. More updates for AFLR4 — galbramc / detail
  379. CG Field constructor minor speed improvements. Nightly tolerances. — galbramc / detail
  380. refactor to remove additional unneeded fields, should reduce the — hcarson / detail
  381. Improved the speed of CG Field constructors. Should help local solves. — galbramc / detail
  382. Minor fixes — galbramc / detail
  383. Upgraded cppcheck on reynolds — galbramc / detail
  384. A few more minor speed improvements to Galerkin error estimates. — galbramc / detail
  385. xfielddomain fixes for avro api changes — pcaplan / detail
  386. unit test fixes for avro changes — pcaplan / detail
  387. some unit testing on polytopes — pcaplan / detail
  388. push to mac for IMR — pcaplan / detail
  389. Fixed bug when parallelizing nodal metrics — galbramc / detail
  390. Fix for MultiScale metric — galbramc / detail
  391. moved integrand construction outside of loops for speed — hcarson / detail
  392. caught bug with assignment rather than accumulation — hcarson / detail
  393. that speed up didn't work.... — hcarson / detail
  394. added get options for orientation, and caught bug with invalid split — hcarson / detail
  395. added a check to see if element is owned by local processor — hcarson / detail
  396. unused variable — hcarson / detail
  397. Suppress cppcheck — galbramc / detail
  398. another unit test — hcarson / detail
  399. Added requested element print out. Fixed int for computing cost. — galbramc / detail
  400. some more unit tests and caught a bug — hcarson / detail
  401. Better CG load balancing. PETSc BAIJ works for processors with no DOF — galbramc / detail
  402. Fix for error estimate nodal outputField — galbramc / detail
  403. added dictionary options for SineSineSine — hcarson / detail
  404. hunting some int casts — hcarson / detail
  405. bumping that coverage up — hcarson / detail
  406. 3D Element Dual test — hcarson / detail
  407. tweak — hcarson / detail
  408. Added mach output functional for DeltaWing — galbramc / detail
  409. Started to rework cmake folder test names — galbramc / detail
  410. forgot a dictionary — hcarson / detail
  411. Added mach field dump for MOESS delta wing — galbramc / detail
  412. New folder test names. We can revert/modify if they are awkward — galbramc / detail
  413. Missed XDIR related things — galbramc / detail
  414. dictionary fixes and parameter tweaks — hcarson / detail
  415. more dictionary fixes — hcarson / detail
  416. Periodic boundary support for gmsh reader — blsc / detail
  417. reduced test size — hcarson / detail
  418. Updates so refine might work in parallel — galbramc / detail
  419. Updated refine check with cmake — galbramc / detail
  420. shortened test again... — hcarson / detail
  421. Fixes for DeltaWing to dump mach field — galbramc / detail
  422. Removed deformationTime.dat — galbramc / detail
  423. PETSc uses x as initial guess. Use P-Adjoint as initial P+1-Adjoing with — galbramc / detail
  424. Clean up adjoint solve for DeltaWing — galbramc / detail
  425. Don't run refine in parallel yet — galbramc / detail
  426. changing to unstabilized for testing — hcarson / detail
  427. tweaks and removing an unintended file — hcarson / detail
  428. basic scheduler and timing dumps at the end of test adapthist — hcarson / detail
  429. Periodic gmsh fix for parallel — blsc / detail
  430. moving box — hcarson / detail
  431. mend — hcarson / detail
  432. moving box — hcarson / detail
  433. forgot to allow PETSC — hcarson / detail
  434. JacobianFunctionalCell_Galerkin now works in parallel. Other small — galbramc / detail
  435. changed to copy construction — hcarson / detail
  436. Missed a solution initialization for PETSc — galbramc / detail
  437. Added parallel interfac to XField_Lagrange. — galbramc / detail
  438. Updated XField3D_refine so it hopefully works in parallel — galbramc / detail
  439. work towards calling avro from parallel SANS — pcaplan / detail
  440. refine API now works in parallel — galbramc / detail
  441. Don't allocate P and P+1 jacobian at the same time for Galerkin — galbramc / detail
  442. Forgot some files — galbramc / detail
  443. Various fixes — galbramc / detail
  444. More informative error messages — galbramc / detail
  445. One more fix for parallel grid creation — galbramc / detail
  446. Typo — galbramc / detail
  447. More robust EPIC call interface. Improved refine build. — galbramc / detail
  448. Fixed memory leak — galbramc / detail
  449. More robust system call to refine — galbramc / detail
  450. might Edge local work? — hcarson / detail
  451. running a 3D CG adapt in parallel! — hcarson / detail
  452. forgot to actually use the scheduler — hcarson / detail
  453. Precondition adjoint P+1 solve with adjoint P solve for DGBR2 — galbramc / detail
  454. Forgot some files — galbramc / detail
  455. Wroking on L2 projections. Various fixes — galbramc / detail
  456. Fixes for L2 projection cases — galbramc / detail
  457. Typo — galbramc / detail
  458. added a targetCost scheduler — hcarson / detail
  459. unused variable and style fixes — hcarson / detail
  460. maintain same list of lower-dim egads entities for parallel — pcaplan / detail
  461. avro interface for delta wing case — pcaplan / detail
  462. Minor cleanup — galbramc / detail
  463. Fixes for running avro in parallel — galbramc / detail
  464. merge conflict — pcaplan / detail
  465. boundary conditions in the correct order... — pcaplan / detail
  466. xfielddomain constructor when sans_avro not defined, warning fixes — pcaplan / detail
  467. lingering comma — pcaplan / detail
  468. forgot to comment some testing things that dont work — pcaplan / detail
  469. Various fixes to refine. L2 CG projection works in parallel — galbramc / detail
  470. Fixes for refine. L2 cases to run for paper. — galbramc / detail
  471. Fixed warnings — galbramc / detail
  472. Using DirectLU for DeltaWing adjoint — galbramc / detail
  473. mods to avro interface, added Curved parameter to omit visiblity checks — pcaplan / detail
  474. Various fixes to refine interface and AD L2 cases. — galbramc / detail
  475. Added mlarocca@mit.edu to DeveloperEmailAddresses — mlarocca / detail
  476. Updates for latest fefloa — galbramc / detail
  477. lagrange basis function on pentatopes with unit tests — pcaplan / detail
  478. change to avro interface — pcaplan / detail
  479. All kinds of fixes — galbramc / detail
  480. 4d instantiations, still undefined refs with field & element — pcaplan / detail
  481. Fixed warnings/errors — galbramc / detail
  482. un-instantiated so i can test some things, previous push had wrong — pcaplan / detail
  483. premerge — pcaplan / detail
  484. missing instantiations, fixing a few undef references — pcaplan / detail
  485. Relaxed tolerance — galbramc / detail
  486. Unified robuster system call function — galbramc / detail
  487. Fix mistakes I made related to label in XFieldDomain — galbramc / detail
  488. Fixed analyzer warnings — galbramc / detail
  489. prelim kuhn-freudenthal triangulation via avro — pcaplan / detail
  490. Upgraded builds to latest NLOPT and PETSc. — galbramc / detail
  491. lagrange DOF map & trace2cellrefcoord + unit tests — pcaplan / detail
  492. lagrange dof map testing — pcaplan / detail
  493. Fixes for latest AFLR — galbramc / detail
  494. Updates for L2 projection cases — galbramc / detail
  495. Indexing bug — galbramc / detail
  496. re-order lattice coordinates so we have canonical vertices first — pcaplan / detail
  497. moved eigenvalue calculation to impl + unit tests for 4x4 — pcaplan / detail
  498. spacetime element associativity + unit tests — pcaplan / detail
  499. Added Triple BL to the MultiScale test — galbramc / detail
  500. normal of tet in 4d via svd — pcaplan / detail
  501. finish implementation of tet normal in 4d — pcaplan / detail
  502. elementxfieldspacetime jacobian + volume + unit tests — pcaplan / detail
  503. constructed a 4d xfield! — pcaplan / detail
  504. wrap kuhn freudenthal triangulation around SANS_AVRO ifdef — pcaplan / detail
  505. still cant remember how to trigger dummy commit... — pcaplan / detail
  506. and again... — pcaplan / detail
  507. trailing whitespace — pcaplan / detail
  508. Tweak to refine build — galbramc / detail
  509. Bumped up timing more for Hex Lagrange Cache test — galbramc / detail
  510. Added L2 Projection solver interface — galbramc / detail
  511. git jenkins not working...dummy commit — pcaplan / detail
  512. Added CG for L2Projection — galbramc / detail
  513. Missing include — galbramc / detail
  514. change case — pcaplan / detail
  515. element ridge (TopoDim-2 elements) needed to construct 4d elems — pcaplan / detail
  516. xfielddomain holds ego children not SANS::EGObject, reason is because — pcaplan / detail
  517. instantiations for 4d target metric matching — pcaplan / detail
  518. CG field construction for TopoD4 meshes, tested on p=1 — pcaplan / detail
  519. target metric matching in 4d sandbox — pcaplan / detail
  520. element ridge unit test + equilateral pentatope jacobian — pcaplan / detail
  521. fixed bug with equilateral pentatope jacobian + matlab script + unit — pcaplan / detail
  522. Fix typo — galbramc / detail
  523. field element pentatope tests — pcaplan / detail
  524. debugging costmodel_logeuclidean on topoD4 ping tests — pcaplan / detail
  525. brace alignment — pcaplan / detail
  526. uncomment xfieldspacetime_pentatope tests until actually implemented — pcaplan / detail
  527. unused defs — pcaplan / detail
  528. undefined references without avro — pcaplan / detail
  529. sign compare — pcaplan / detail
  530. missing file to compile — pcaplan / detail
  531. lingering comma — pcaplan / detail
  532. ridge -> frame — pcaplan / detail
  533. undef references — pcaplan / detail
  534. commit deleted files — pcaplan / detail
  535. wrap ifdef SANS_AVRO further ahead — pcaplan / detail
  536. omit spacetime pentatope btest from memcheck because it takes a long — pcaplan / detail
  537. instantiate matrixsyms4 projection for tets — pcaplan / detail
  538. basis function instantiate — pcaplan / detail
  539. matmul instantiation — pcaplan / detail
  540. reduced number of orientations to make elementspacetime_pentatope test — pcaplan / detail
  541. Remove maybe uninitialized wanrings on gnu 8 — galbramc / detail
  542. last instantiation i promise — pcaplan / detail
  543. bug in cost model log-euclidean test because of the vertex/step matrix — pcaplan / detail
  544. seriously this has to be the last one — pcaplan / detail
  545. last one! — pcaplan / detail
  546. trigger commit — pcaplan / detail
  547. up to p=2 for element space time test because it's really slow — pcaplan / detail
  548. Added json parser to PyDict — galbramc / detail
  549. Lots of refactoring of AFLR4 and sansLIPAIM. All seems to be — galbramc / detail
  550. Minor fix — galbramc / detail
  551. Tweak to how AFLR is found — galbramc / detail
  552. Fixed compile error — galbramc / detail
  553. Update minimum boost version to 1.50 due to bug in property_tree json — galbramc / detail
  554. Merged AFLR4 test into EGTessModel — galbramc / detail
  555. More extensive try with sansLIPAIM — galbramc / detail
  556. Most sansLIP updates — galbramc / detail
  557. Fix MKL_PARDISO for transpose solves. Bug fix for AFLR3 — galbramc / detail
  558. Use static MKL libraries due to python issues — galbramc / detail
  559. Don't statically link in the ld library — galbramc / detail
  560. Increased timout time for HDG test — galbramc / detail
  561. Realzed timing on another test — galbramc / detail
  562. push to hypersonic — pcaplan / detail
  563. Separate list of MKL static libraries — galbramc / detail
  564. Always link in MKL statically with sansLIPAIM — galbramc / detail
  565. Moved error message for sansLIP — galbramc / detail
  566. Building mpi all_reduce into FunctionalCell_Galerkin — galbramc / detail
  567. Added missing includes — galbramc / detail
  568. Fixed uninitialized data in Flux_mitState_Nitsche for pure advective. — galbramc / detail
  569. Removed variable length arrays — galbramc / detail
  570. Missed a few variable length arrays — galbramc / detail
  571. One more warning — galbramc / detail
  572. Fixed warnings — galbramc / detail
  573. Better cleanup of coverage information — galbramc / detail
  574. Don't build sandbox with nightly — galbramc / detail
  575. Clang analyzer should still build sandbox — galbramc / detail
  576. Revived gradation penalty. Needs lots of tweaks and studying — galbramc / detail
  577. Updates for latest version of AFLR — galbramc / detail
  578. Gradation still needs more work... — galbramc / detail
  579. Fix compiler error — galbramc / detail
  580. Fixed arry bound typo in test — galbramc / detail
  581. more tests for orientations of tets in 4d — pcaplan / detail
  582. lingering changes — pcaplan / detail
  583. DG fields in 4d + unit tests — pcaplan / detail
  584. silly typo — pcaplan / detail
  585. can only use KF triangulation if avro is hooked in — pcaplan / detail

#229 (Oct 27, 2018, 1:52:10 AM)

  1. Added H tensor output from Euler2D — blsc / detail
  2. some tweaks — hcarson / detail
  3. tweaks — hcarson / detail
  4. removing erroneous refine things — hcarson / detail
  5. getting acdl develop CMakeIncludes — hcarson / detail
  6. more tweaks — hcarson / detail
  7. moving to hypersonic — hcarson / detail
  8. change to let MPI build the directories just in time — hcarson / detail
  9. too many white lines — hcarson / detail
  10. to run on devastator — hcarson / detail
  11. tweaks for hypersonic — hcarson / detail
  12. Nodal Error estimate. Takes the average of the attached nodes, the — hcarson / detail
  13. hacking about trying Nodal Estimation — hcarson / detail
  14. typo/bug maybe? — hcarson / detail
  15. another one — hcarson / detail
  16. pre merge — hcarson / detail
  17. Multiscale metric case, debugging printing a continuous Mach number — hcarson / detail
  18. pre merge — hcarson / detail
  19. forgot to assert the basis was the same for the two fields — hcarson / detail
  20. projects from the Dfld basis onto the Cfld basis so accumulating to the — hcarson / detail
  21. pre merge — hcarson / detail
  22. seems to write Mach number solbs now — hcarson / detail
  23. moving to hypersonic — hcarson / detail
  24. a fix to go to hypersonic — hcarson / detail
  25. weird tecplot bug — hcarson / detail
  26. compiles again, moving to devastator — hcarson / detail
  27. MultiScaleMetric for transfering to NASA — hcarson / detail
  28. moving to laptop — hcarson / detail
  29. transfering to Dev — hcarson / detail
  30. moving to devastator to get EPIC — hcarson / detail
  31. --ammend — hcarson / detail
  32. moving to devastator — hcarson / detail
  33. transfering to dev — hcarson / detail
  34. moving to hyper — hcarson / detail
  35. pre merge — hcarson / detail
  36. tweak — hcarson / detail
  37. added output dump info to MultiScaleMetric case, should be ready to — hcarson / detail
  38. making MultiScale and MOESS cases consistent and ready for hypersonic — hcarson / detail
  39. tweaks back to labbox — hcarson / detail
  40. Backwards facing step unit grid — hcarson / detail
  41. pre merge commit — hcarson / detail
  42. backwards step cases — hcarson / detail
  43. removed SolverInterface_Nodal_Galerkin, it ended up only a tiny tweak — hcarson / detail
  44. added options for tweaking order of the tau stabilization. Can force the — hcarson / detail
  45. added Arthur's version of Experimental, copied from his email — hcarson / detail
  46. preprocessor defined version with volume weighting, ought to remove this — hcarson / detail
  47. forgot the CMakeLists — hcarson / detail
  48. DG case updates — hcarson / detail
  49. nodal test passes again — hcarson / detail
  50. pre merge — hcarson / detail
  51. moving back to nia — hcarson / detail
  52. moving to dev — hcarson / detail
  53. tweaks to case — hcarson / detail
  54. pre merge — hcarson / detail
  55. moving to dev — hcarson / detail
  56. pre merge — hcarson / detail
  57. added an argument for fixing the order used in the calculation of tau. — hcarson / detail
  58. mod solution fcn — arthuang / detail
  59. moving to dev — hcarson / detail
  60. moving to dev — hcarson / detail
  61. 2D refine interface, it doesn't work yet — hcarson / detail
  62. hacks to move to NASA box — hcarson / detail
  63. went back to nNodes for advective stabilization — arthuang / detail
  64. changed to all take order of stabilization as argument to stab — hcarson / detail
  65. diff got lost in the merge, and a line too long — hcarson / detail
  66. forgot the refine preprocessor bits, and a curly brace was one space — hcarson / detail
  67. vera fixes — hcarson / detail
  68. forgot another one — hcarson / detail
  69. tweaks for jenkins — hcarson / detail
  70. curly braces again — hcarson / detail
  71. fixed coarsening node numbering bug, added a unit test to guard it — hcarson / detail
  72. forgot some things — hcarson / detail
  73. fixed warning about unread data — hcarson / detail
  74. modified stabilized output, reverted to node based advection — arthuang / detail
  75. sandbox, added high order quads to PX mesh reader, fixed periodic bug in — jzavala / detail
  76. Removed tabs from files in previous commit. — jzavala / detail
  77. stabilization consistent and passing unit tests. updated nitsche — arthuang / detail
  78. Fixed curly brackets formatting in previous commit's files. — jzavala / detail
  79. Minor cleanup — galbramc / detail
  80. Fixed continuous-param assumption for fluxViscous — blsc / detail
  81. Unit tests passing with param bug fix — blsc / detail
  82. Fixed a nightly warning — galbramc / detail
  83. 1D spacetime shock problems — blsc / detail
  84. Formatting errors — blsc / detail
  85. More bug fix — blsc / detail
  86. Adding hinge computation from CSM. Other minor cleanup. — galbramc / detail
  87. testing with avro — pcaplan / detail
  88. Forward facing step unit grid and spacetime euler2d artificial viscosity — blsc / detail
  89. Turned off some debug output — blsc / detail
  90. PETSc option for spacetime forward facing step — blsc / detail
  91. Work towards Zombie DOFs — galbramc / detail
  92. Updates for LIP solver to use hinge lines — galbramc / detail
  93. Fixed inconsistency in LIPSolver sensitivity — galbramc / detail
  94. Fixed PETSc setup in step case — blsc / detail
  95. Unit test for forward facing step grid — blsc / detail
  96. New Euler BC unit tests — blsc / detail
  97. Fixed index bug for Zombies — galbramc / detail
  98. Tweak for building tetgen with MSYS — galbramc / detail
  99. Added system call option for refine — galbramc / detail
  100. Maybe BDF case for forward facing step — blsc / detail
  101. Updates for calling refine with a system call — galbramc / detail
  102. More refine fixes — galbramc / detail
  103. One more refine fix. And some sansLIPAIM fixes. — galbramc / detail
  104. Missing include — galbramc / detail
  105. Correct missing include — galbramc / detail
  106. Minor fix — galbramc / detail
  107. Made the volume generator option for sansLIP. — galbramc / detail
  108. Default meshesr for sansLIP — galbramc / detail
  109. Added Lagrange-basis duct mesh creator and corresponding sandbox test — jzavala / detail
  110. Working on a bug in sansLIPAIM — galbramc / detail
  111. sansLIPAIM fix — galbramc / detail
  112. Fixed sansLIP data transfer with hinge bodies — galbramc / detail
  113. Fixed formatting errors. — jzavala / detail
  114. moess to minimize distance between implied metric and target field — pcaplan / detail
  115. move to new branch — pcaplan / detail
  116. a few (very simple) pentatope things — pcaplan / detail
  117. metric optimisation to match target metric — pcaplan / detail
  118. delete bad stuff — pcaplan / detail
  119. Fixed more formatting errors. — jzavala / detail
  120. Renamed duct mesh generator header and source files and edited — jzavala / detail
  121. testing with metric optimizer, will definitely fail jenkins — pcaplan / detail
  122. forgot to remove cmake add_subdir for my sandbox, will gitignore — pcaplan / detail
  123. vera fixes, missing file — pcaplan / detail
  124. try to fix invalid initializations — pcaplan / detail
  125. Renamed the duct mesher file mentioned inside CMakeLists.txt — jzavala / detail
  126. removed the rfld dumping as it doesn't work in parallel — hcarson / detail
  127. changed monomial to accept reals, added a 1D L2Projection toy — hcarson / detail
  128. changed monomial to accept reals, added a 1D L2Projection toy — hcarson / detail
  129. sandbox edits — arthuang / detail
  130. revert sandbox not working — arthuang / detail
  131. Added Pseudo Time solving to DGAdvective Smoothbump toy. — jzavala / detail
  132. Cleaned up duct mesh generator files. — jzavala / detail
  133. Added arc mesh generator and corresponding toy test file. Updated — jzavala / detail
  134. Various fixes for LIP AIM — galbramc / detail
  135. Relaxed unit test timing a bit more — galbramc / detail
  136. relax tol — arthuang / detail
  137. Renamed arc mesh generator files to annulus. Minor changes elsewhere. — jzavala / detail
  138. Minor change. — jzavala / detail
  139. Minor fixes. — jzavala / detail
  140. branch change — hcarson / detail
  141. Removed non-determinstic wake intersection — galbramc / detail
  142. Fixed compile errors — galbramc / detail
  143. Another compile problem — galbramc / detail
  144. Undo — galbramc / detail
  145. Lots of work towards Zombies — galbramc / detail
  146. Forgot a file — galbramc / detail
  147. Fixed compile error — galbramc / detail
  148. Added sansLIPAIM to jenkins compile — galbramc / detail
  149. Hopefully fixed local2native DG indexing — galbramc / detail
  150. Fix for zombie counting — galbramc / detail
  151. Higher-resolution ShuOsher case — blsc / detail
  152. added order and power runtime flags — hcarson / detail
  153. tweaks to case and considering a different stabilization — hcarson / detail
  154. working on a new tau and moving some stuff to dev — hcarson / detail
  155. allowing command line spec — hcarson / detail
  156. VMS seems to be adapting properlygit status! — hcarson / detail
  157. conflicts — hcarson / detail
  158. typo — hcarson / detail
  159. changing back to nDOF — hcarson / detail
  160. testing theory on linear basis for tau — hcarson / detail
  161. reverting to develop — hcarson / detail
  162. tool to guide mesh generator towards target metric from implied one — pcaplan / detail
  163. changes to Experimental2, gives p order scaling stabilization now — hcarson / detail
  164. changes to Experimental2, gives p order scaling stabilization now — hcarson / detail
  165. Changes to help converge forward facing step — blsc / detail
  166. DG field now includes zombies — galbramc / detail
  167. Minor fix — galbramc / detail
  168. tweaks — hcarson / detail
  169. fix to SolverInterface, and changes to NSFlat Plate — hcarson / detail
  170. using Exp not Exp2 as missing some instanations for LinAlg. — hcarson / detail
  171. Added missing include — galbramc / detail
  172. Need to remove LocalSolve2D_DGBR2_Triangle_AD_btest — galbramc / detail
  173. Proper parallel DGBR2 LocalSolve — galbramc / detail
  174. Reduce runtime for ElementLocalSolve3D_DGBR2_Tet_AD_btest — galbramc / detail
  175. Reduced number of partitions for — galbramc / detail
  176. Various fixes — galbramc / detail
  177. Added libMeshb solution reader — galbramc / detail
  178. Reworked multiscale metric so it mostly works — galbramc / detail
  179. Minor fixes — galbramc / detail
  180. Fix link error. Zero out Mach number of walls for MultiScale metric. — galbramc / detail
  181. Tweaks to DeltaWing MultiScale — galbramc / detail
  182. Typo — galbramc / detail
  183. Fixed bug in FunctionalBoundaryTrace_DGBR2 related to new partitioning — galbramc / detail
  184. Fixed some bugs related to new partitioning — galbramc / detail
  185. Forgot some steps in the fixes — galbramc / detail
  186. updated sansLIPAIM with consistent function signatures — galbramc / detail
  187. Reworking CG DOF ordering — galbramc / detail
  188. Added spactime diffusion option for 2D Euler with artificial viscosity — blsc / detail
  189. Updated test for new PDEEuler2D with artificial viscosity interface — blsc / detail
  190. Updated 2D CG edge numbering — galbramc / detail
  191. Added back working spacetime diffusion to euler in artificial viscosity — blsc / detail
  192. Updated 1D euler with optional spacetime diffusion — blsc / detail
  193. Added asserts to stop bad parameters using for spacetime — blsc / detail
  194. Formatting errors — blsc / detail
  195. Completely reworking CG field constructions — galbramc / detail
  196. More work on new CG Field creation — galbramc / detail
  197. Hopefully fixed intel error by extending boost::mpl::vector — blsc / detail
  198. NavierStokes2D with artificial viscosity — blsc / detail
  199. Formatting issues — blsc / detail
  200. Missed a few files — blsc / detail
  201. Formatting fix — blsc / detail
  202. Formatting fix — blsc / detail
  203. Formatting fix — blsc / detail
  204. Complete rework of CG field construction. Works in parallel now. Removed — galbramc / detail
  205. Fixed some warnings and compile errors — galbramc / detail
  206. Missing include — galbramc / detail
  207. More field initializations — galbramc / detail
  208. Slight efficiency improvement for HDG adjoint calculation — galbramc / detail
  209. Fixed another uninitialized field — galbramc / detail
  210. CG works in parallel! — galbramc / detail
  211. CG was missing boundary elements in parallel. Now it works! — galbramc / detail
  212. Fixed warning — galbramc / detail
  213. Added evalReferenceCoordinateHessian for 3D. More unit testing for — galbramc / detail
  214. Forgot some DOFs — galbramc / detail
  215. Relaxed tolerances — galbramc / detail
  216. Local solve updates — galbramc / detail
  217. Modified tolerances — galbramc / detail
  218. Remove print statements — galbramc / detail
  219. Updated 1D local solve and removed depricated test — galbramc / detail
  220. Tecplog xfld dump now includes node+cell ranks — galbramc / detail
  221. Include Galerkin integrands for DGBR2 boundary output functionals — galbramc / detail
  222. Fixed the fix — galbramc / detail
  223. Missing include — galbramc / detail
  224. fixing nightly warning — hcarson / detail
  225. changed the essential bc application to use ghost boundaries. No longer — hcarson / detail
  226. Changed Nitche to Cb = 2.0 for AD CG P3 adaptation — galbramc / detail
  227. changed Dual to Dual2 in anticipation of the new local solve — hcarson / detail
  228. updated unit tests to use the ghost boundary trace freezing rule — hcarson / detail
  229. preparations for the alternative constructor — hcarson / detail
  230. cleanup of implied metric limiter — pcaplan / detail
  231. vera fixes — pcaplan / detail
  232. didn't mean to include a certain test — pcaplan / detail
  233. switching back to Dual notation, splitting the EdgeLocal and — hcarson / detail
  234. moved to ptrs in the base class, dry run for elemental version — hcarson / detail
  235. Topology instantiations and avro cmake updates — galbramc / detail
  236. Fixed AVRO cmake typo. Minor format cleanup for limited metric. — galbramc / detail
  237. refactor to move most member variables into the base class XField_Common — hcarson / detail
  238. Forgot a file, and all non edge specific methods are now buried in the — hcarson / detail
  239. changed a template setup and added a first Element Local test — hcarson / detail
  240. new splitting routine compiles — hcarson / detail
  241. moved the split function up to Common level, made it more sophisticated — hcarson / detail
  242. Expanded the 3D split and changed the arguments for the 1D split to — hcarson / detail
  243. forgot you can't write to tmp/ — hcarson / detail
  244. find and replace bug — hcarson / detail
  245. typo in file name — hcarson / detail
  246. forgot test directory — hcarson / detail
  247. commented out some impossible branches in 2D, and added another unsplit — hcarson / detail
  248. unit tests — hcarson / detail
  249. ElementArea now calls the same actual split method as edge local — hcarson / detail
  250. added a copy constructor test, working on testing splits for Element — hcarson / detail
  251. a very first element local split test — hcarson / detail
  252. moved some memory outside of loops so it doesn't get created and — hcarson / detail
  253. unit tests for adding in new cellgroup 1 elements and traces, looks like — hcarson / detail
  254. unit test involving reattaching a cell group 1 boundary element — hcarson / detail
  255. Adding RK Riemann Problem — eam5515 / detail
  256. Various fixes to get NS GLS working in 3D — galbramc / detail
  257. Updated pyrite files for nightly testing — galbramc / detail
  258. Set longer timeout for specific long running unit tests — galbramc / detail
  259. caught the memory leak, and a bunch of instantiations and fixes and unit — hcarson / detail
  260. forgot a thing — hcarson / detail
  261. style check — hcarson / detail
  262. Added promote_Surreal for ParamTuple — galbramc / detail
  263. fixes: — hcarson / detail
  264. file renaming switches — hcarson / detail
  265. forgot to remove print out. — hcarson / detail
  266. added catch for ghost boundaries — hcarson / detail
  267. forgot file write — hcarson / detail
  268. missed a thing — hcarson / detail
  269. Don't do parallel solves yet with the new ElementDualLocal solves — galbramc / detail
  270. Added TimeOut BC for spacetime that is distinct from BCNone — blsc / detail
  271. some 4d stuff — pcaplan / detail
  272. placeholders for unit tests — pcaplan / detail
  273. Many cppcheck fixes, but not all — galbramc / detail
  274. Fixed compile error — galbramc / detail
  275. caught a ghost boundary bug, now have different bugs in parallel — hcarson / detail
  276. Updated Partiioning for CG element dual solves — galbramc / detail
  277. Relaxed tolerances on local solves — galbramc / detail
  278. Nightly fixes — galbramc / detail
  279. Upgraded PETSc version — galbramc / detail
  280. Fixed PETSc version test — galbramc / detail
  281. changed to allow Real indices for monomial — hcarson / detail
  282. added ghost tests, turned off the split ghost tests, as we don't have a — hcarson / detail
  283. changed some comments — hcarson / detail
  284. vim put some actual tabs in... and changing some odd pieces — hcarson / detail
  285. warning about unset data — hcarson / detail
  286. relaxing tolerance — hcarson / detail
  287. trace to cell reference coordinates (plus matlab script), — pcaplan / detail
  288. trace to cell reference coordinates (plus matlab script), — pcaplan / detail
  289. element topology tracks number of permutations so possible trace — pcaplan / detail
  290. Fixes so boost xml files are correctly dumped — galbramc / detail
  291. Fixed system tests for coverage — galbramc / detail
  292. Allowed for longer run times on specific tests — galbramc / detail
  293. One more tweak for coverage of system tests — galbramc / detail
  294. Typo — galbramc / detail
  295. Missed one more — galbramc / detail
  296. Forgot to add files — galbramc / detail
  297. One more typo — galbramc / detail
  298. A slightly different version — galbramc / detail
  299. Minor fix — galbramc / detail
  300. Fixed find and replace mistake — galbramc / detail
  301. fixed a few bugs with trace-to-cell ref coordinates — pcaplan / detail
  302. hasFluxConservative is noe hasFluxAdvectiveTime — blsc / detail
  303. xfield and element definitions for pentatopes — pcaplan / detail
  304. spacetime field and element files — pcaplan / detail
  305. tolerance — hcarson / detail
  306. relaxed again — hcarson / detail
  307. field and xfield instantiations in 4d — pcaplan / detail
  308. map between quadrature points of different trace orienations (in 4d) — pcaplan / detail
  309. lingering space — pcaplan / detail
  310. unused variables...dont worry i'll unit test these functions — pcaplan / detail
  311. uninit fixes — pcaplan / detail
  312. 2D Riemann problem now uses surrogates — blsc / detail
  313. A box grid with two ghost boundaries — hcarson / detail
  314. added split tests with ghost boundaries attached to cell group 1, and — hcarson / detail
  315. duplicate test name — hcarson / detail
  316. Fixes to EGADS loop senses when sense is +/-2 — galbramc / detail
  317. Forgot a file — galbramc / detail
  318. Fixed array out-of-bounds in Pentatope basis function. Fixed memcheck — galbramc / detail
  319. Speed improvement for stabilized CG. 3DNS isothermal wall BC. Many other — galbramc / detail
  320. More robust jacobian check for CG Stabilized NS — galbramc / detail
  321. changed DOF sharing calculations to correctly use max, and to calculate — hcarson / detail
  322. Relaxed tolerance — galbramc / detail
  323. moved the hard work split method into the common instantiation — hcarson / detail
  324. fixing up the 3D logic a little bit, the edge local still works, need to — hcarson / detail
  325. unsplit element dual tests — hcarson / detail
  326. Fixed warnings — galbramc / detail
  327. first, extremely basic split test — hcarson / detail
  328. another simple split test, now with reattaching boundary groups attached — hcarson / detail
  329. duplicate named tests — hcarson / detail
  330. some tests for ElementDual Solution transfer, no surprises — hcarson / detail
  331. duplicate test names — hcarson / detail
  332. Reworkd DOF sync so Newton syncs zombies. Linear solver timings — galbramc / detail
  333. Missed one — galbramc / detail
  334. Forgot to add timing variable for MKL_PARDISO — galbramc / detail
  335. Copy pasta — galbramc / detail
  336. added scaling and offest to TripleBL and changed naming convention to — hcarson / detail
  337. forgot the pattern update — hcarson / detail
  338. New parallel unit tests. Ghost/Zombie DOFs synced in Newton. PETSc build — galbramc / detail
  339. various changes to get 3D adapting — hcarson / detail
  340. a 3D CG adaptation! — hcarson / detail
  341. changes to 3D case to run on hypersonic — hcarson / detail
  342. Missing include — galbramc / detail
  343. to run a big case — hcarson / detail
  344. Custom build of gcc 8.2 — galbramc / detail
  345. Jenkims env fix for gcc8 — galbramc / detail
  346. Adding new RK unit test — eam5515 / detail
  347. Adding Complete RK unit test and new CMake list — eam5515 / detail
  348. Cleanup RK Parallel Serial test. Have not found the bug yet. — galbramc / detail
  349. Fixes so RK works with new parallel paritioning — galbramc / detail
  350. Assert Galerkin Stabilized PDE fluxViscousLinearInGradient. Add CMake — galbramc / detail
  351. commiting a bunch of non-working tests and the 3D CG case. — hcarson / detail
  352. CG Field constructor minor speed improvements. Nightly tolerances. — galbramc / detail
  353. refactor to remove additional unneeded fields, should reduce the — hcarson / detail
  354. Improved the speed of CG Field constructors. Should help local solves. — galbramc / detail
  355. Minor fixes — galbramc / detail
  356. Upgraded cppcheck on reynolds — galbramc / detail
  357. A few more minor speed improvements to Galerkin error estimates. — galbramc / detail
  358. xfielddomain fixes for avro api changes — pcaplan / detail
  359. unit test fixes for avro changes — pcaplan / detail
  360. some unit testing on polytopes — pcaplan / detail
  361. push to mac for IMR — pcaplan / detail
  362. Fixed bug when parallelizing nodal metrics — galbramc / detail
  363. Fix for MultiScale metric — galbramc / detail
  364. moved integrand construction outside of loops for speed — hcarson / detail
  365. caught bug with assignment rather than accumulation — hcarson / detail
  366. that speed up didn't work.... — hcarson / detail
  367. added get options for orientation, and caught bug with invalid split — hcarson / detail
  368. added a check to see if element is owned by local processor — hcarson / detail
  369. unused variable — hcarson / detail
  370. Suppress cppcheck — galbramc / detail
  371. another unit test — hcarson / detail
  372. Added requested element print out. Fixed int for computing cost. — galbramc / detail
  373. some more unit tests and caught a bug — hcarson / detail
  374. Better CG load balancing. PETSc BAIJ works for processors with no DOF — galbramc / detail
  375. Fix for error estimate nodal outputField — galbramc / detail
  376. added dictionary options for SineSineSine — hcarson / detail
  377. hunting some int casts — hcarson / detail
  378. bumping that coverage up — hcarson / detail
  379. 3D Element Dual test — hcarson / detail
  380. tweak — hcarson / detail
  381. Added mach output functional for DeltaWing — galbramc / detail
  382. Started to rework cmake folder test names — galbramc / detail
  383. forgot a dictionary — hcarson / detail
  384. Added mach field dump for MOESS delta wing — galbramc / detail
  385. New folder test names. We can revert/modify if they are awkward — galbramc / detail
  386. Missed XDIR related things — galbramc / detail
  387. dictionary fixes and parameter tweaks — hcarson / detail
  388. more dictionary fixes — hcarson / detail
  389. Periodic boundary support for gmsh reader — blsc / detail
  390. reduced test size — hcarson / detail
  391. Updates so refine might work in parallel — galbramc / detail
  392. Updated refine check with cmake — galbramc / detail
  393. shortened test again... — hcarson / detail
  394. Fixes for DeltaWing to dump mach field — galbramc / detail
  395. Removed deformationTime.dat — galbramc / detail
  396. PETSc uses x as initial guess. Use P-Adjoint as initial P+1-Adjoing with — galbramc / detail
  397. Clean up adjoint solve for DeltaWing — galbramc / detail
  398. Don't run refine in parallel yet — galbramc / detail
  399. changing to unstabilized for testing — hcarson / detail
  400. tweaks and removing an unintended file — hcarson / detail
  401. basic scheduler and timing dumps at the end of test adapthist — hcarson / detail
  402. Periodic gmsh fix for parallel — blsc / detail
  403. moving box — hcarson / detail
  404. mend — hcarson / detail
  405. moving box — hcarson / detail
  406. forgot to allow PETSC — hcarson / detail
  407. JacobianFunctionalCell_Galerkin now works in parallel. Other small — galbramc / detail
  408. changed to copy construction — hcarson / detail
  409. Missed a solution initialization for PETSc — galbramc / detail
  410. Added parallel interfac to XField_Lagrange. — galbramc / detail
  411. Updated XField3D_refine so it hopefully works in parallel — galbramc / detail
  412. work towards calling avro from parallel SANS — pcaplan / detail
  413. refine API now works in parallel — galbramc / detail
  414. Don't allocate P and P+1 jacobian at the same time for Galerkin — galbramc / detail
  415. Forgot some files — galbramc / detail
  416. Various fixes — galbramc / detail
  417. More informative error messages — galbramc / detail
  418. One more fix for parallel grid creation — galbramc / detail
  419. Typo — galbramc / detail
  420. More robust EPIC call interface. Improved refine build. — galbramc / detail
  421. Fixed memory leak — galbramc / detail
  422. More robust system call to refine — galbramc / detail
  423. might Edge local work? — hcarson / detail
  424. running a 3D CG adapt in parallel! — hcarson / detail
  425. forgot to actually use the scheduler — hcarson / detail
  426. Precondition adjoint P+1 solve with adjoint P solve for DGBR2 — galbramc / detail
  427. Forgot some files — galbramc / detail
  428. Wroking on L2 projections. Various fixes — galbramc / detail
  429. Fixes for L2 projection cases — galbramc / detail
  430. Typo — galbramc / detail
  431. added a targetCost scheduler — hcarson / detail
  432. unused variable and style fixes — hcarson / detail
  433. maintain same list of lower-dim egads entities for parallel — pcaplan / detail
  434. avro interface for delta wing case — pcaplan / detail
  435. Minor cleanup — galbramc / detail
  436. Fixes for running avro in parallel — galbramc / detail
  437. merge conflict — pcaplan / detail
  438. boundary conditions in the correct order... — pcaplan / detail
  439. xfielddomain constructor when sans_avro not defined, warning fixes — pcaplan / detail
  440. lingering comma — pcaplan / detail
  441. forgot to comment some testing things that dont work — pcaplan / detail
  442. Various fixes to refine. L2 CG projection works in parallel — galbramc / detail
  443. Fixes for refine. L2 cases to run for paper. — galbramc / detail
  444. Fixed warnings — galbramc / detail
  445. Using DirectLU for DeltaWing adjoint — galbramc / detail
  446. mods to avro interface, added Curved parameter to omit visiblity checks — pcaplan / detail
  447. Various fixes to refine interface and AD L2 cases. — galbramc / detail
  448. Added mlarocca@mit.edu to DeveloperEmailAddresses — mlarocca / detail
  449. Updates for latest fefloa — galbramc / detail
  450. lagrange basis function on pentatopes with unit tests — pcaplan / detail
  451. change to avro interface — pcaplan / detail
  452. All kinds of fixes — galbramc / detail
  453. 4d instantiations, still undefined refs with field & element — pcaplan / detail
  454. Fixed warnings/errors — galbramc / detail
  455. un-instantiated so i can test some things, previous push had wrong — pcaplan / detail
  456. premerge — pcaplan / detail
  457. missing instantiations, fixing a few undef references — pcaplan / detail
  458. Relaxed tolerance — galbramc / detail
  459. Unified robuster system call function — galbramc / detail
  460. Fix mistakes I made related to label in XFieldDomain — galbramc / detail
  461. Fixed analyzer warnings — galbramc / detail
  462. Upgraded builds to latest NLOPT and PETSc. — galbramc / detail
  463. Updates for L2 projection cases — galbramc / detail
  464. Indexing bug — galbramc / detail
  465. Added Triple BL to the MultiScale test — galbramc / detail

#228 (Jul 21, 2018, 1:52:10 AM)

  1. Added Linf cost calculation (not tested). Fixed ReferenceElementCost to — galbramc / detail
  2. Fixed compile error — galbramc / detail
  3. Forgot instantiation — galbramc / detail
  4. Speed up ping test by commenting out tests that are covered in other — shunz / detail
  5. Relaxed tolerance — shunz / detail

#227 (Jul 14, 2018, 1:52:10 AM)

  1. Cleaned up test case — eam5515 / detail
  2. Added updated gmsh reader test — eam5515 / detail
  3. Reader change — eam5515 / detail
  4. Added a control test case — eam5515 / detail
  5. Added plate test case — eam5515 / detail
  6. Fixed tandem sphere normalization — galbramc / detail
  7. Fixed vara and compiler warnings — galbramc / detail
  8. Refactored indexing in IBL — shunz / detail
  9. Removed redundant IBL auxiliary equation implementation — shunz / detail
  10. Refactored IBL to include placeholders for the amplification factor — shunz / detail
  11. Refactored/fixed panel method to accommodate changes in PDEIBL.  Patched — shunz / detail
  12. Removed more unnecessary files — shunz / detail
  13. Turned off verbose printout — shunz / detail
  14. Delta wing case to dump metrics for ODU — hcarson / detail
  15. Added IBL PDE indexing checks.  Added a var interpreter method.  Fixed a — shunz / detail
  16. Added equations to IBL: amplification factor growth and shear stress — shunz / detail
  17. Added 4th order Lagrange Basis Functions for Hexs and Unit Tests — eam5515 / detail
  18. patched some unit tests, but still working progress — shunz / detail
  19. Cleaned up IO files in sandbox — shunz / detail
  20. Refactored to use line-based parsing when reading initial IBL solutions. — shunz / detail
  21. Added more quantities to IBL output list — shunz / detail
  22. Added pressure gradient parameter beta to IBL output list — shunz / detail
  23. 1. Refactored/debugged IBL PDE's transition and lag implementation; 2. — shunz / detail
  24. Refactored profile selection.  Minor working update on lag equation — shunz / detail
  25. Cleaned up IBL transition and lag source terms — shunz / detail
  26. Changed primary unknown from G to ctau.  Updated naming. — shunz / detail
  27. More fix on VarType naming — shunz / detail
  28. 1. Cleaned up template types; 2. Refactored lag equation formulation: — shunz / detail
  29. Minor refactoring on IBL pde — shunz / detail
  30. tweaks to read in ODU grids — hcarson / detail
  31. Refactored secondary var calculations: now supporting multiple — shunz / detail
  32. Added ctau_eq to IBL output list — shunz / detail
  33. Fixed a bug in ctau_eq calculation — shunz / detail
  34. a possible bug fix for FeFloa — hcarson / detail
  35. stuff to read in the ODU grids — hcarson / detail
  36. Fixed system test on coupled IBL/panel.  Verified that newly added — shunz / detail
  37. Avoided dividing by zero when calculating pressure gradient parameter — shunz / detail
  38. Fixed XFOIL-lag closure — shunz / detail
  39. Completed IBL3 lag/dissipation formulation and add that of XFOIL — shunz / detail
  40. refactored ctau transition fitting: forced transition at airfoil TE now — shunz / detail
  41. Refactored transition fitting of ctau for transition that happens on the — shunz / detail
  42. tweaks to read in the ODU grids — hcarson / detail
  43. minor edit — shunz / detail
  44. First solution of forced transition at a grid node — shunz / detail
  45. Fixed typos in comments — shunz / detail
  46. Renamed velocity profile class — shunz / detail
  47. Renamed secondary var class — shunz / detail
  48. Fixed IBL unit tests compilation — shunz / detail
  49. Modularized fluid parameters into a dedicated model class — shunz / detail
  50. refactored and unit tested gas model in IBL — shunz / detail
  51. Removed Pr in IBL — shunz / detail
  52. Refactored IBL edge viscosity model/parameter — shunz / detail
  53. A solve case for running a sequence of grids — hcarson / detail
  54. increased the PTC max iter and use the final solution from the previous — hcarson / detail
  55. always starts from a p0 solve, now has lots of Newton steps allowed — hcarson / detail
  56. Generalized abstractions of flow parameters and compressibility types. — shunz / detail
  57. Added more velocity profile unit tests. Updated function name — shunz / detail
  58. Fixed an insidious bug in IBL source term — shunz / detail
  59. Passed all the IBL unit tests — shunz / detail
  60. Added instantiation.  Fixed panel method unit tests. — shunz / detail
  61. minor fix — shunz / detail
  62. Removed files that popped up again in the last merge.  Fix for last — shunz / detail
  63. Abstracted transition model into a dedicated class — shunz / detail
  64. Replaced DBL_EPSILON with std::numeric_limits<Real>::epsilon() — shunz / detail
  65. Fixed missing typename and template keywords — shunz / detail
  66. Fixed panel method system testing dump.  Refactored transition model — shunz / detail
  67. Updating delta wing — galbramc / detail
  68. Updated linesearch names — galbramc / detail
  69. Refactored transition model: 1. ensures profile and intermittency is — shunz / detail
  70. Refactored control statements to avoid compiler warnings — shunz / detail
  71. Fixed uncoupled IBL test cases.  Airfoil+wake may be refactored after — shunz / detail
  72. Fixed system tests for IBL. Deleted obsolete ones — shunz / detail
  73. Moved the TE thickness treatment from integrand to PDEIBL — shunz / detail
  74. Covered fluid models with more extensive unit tests.  Turned off some — shunz / detail
  75. Refactored transition model profile choice logic.  Fixed PDEIBL unit — shunz / detail
  76. Fixed system test.  More unit tests.  Some cleanup — shunz / detail
  77. Updated TE matching condition for amp factor eqn — shunz / detail
  78. Minor refactoring — shunz / detail
  79. Refactored secondary variable class in IBL and added more unit tests — shunz / detail
  80. Minor update.  Added a system test — shunz / detail
  81. Added a system test for forced transition case — shunz / detail
  82. Fixed some double semicolons — shunz / detail
  83. Overhauled IBL with 6-unknown cut-cell formulation.  All unit test — shunz / detail
  84. Went on fixing PanelMethod unit tests that are affected by IBL — shunz / detail
  85. Fixed missing keywords: typename and template — shunz / detail
  86. Refactored IBL-related fluxAdvectiveUpwind to fix compiling errors. — shunz / detail
  87. Fixed uncoupled IBL system test case on airfoil only.  [TBD] — shunz / detail
  88. Fixed block 4x4 jacobian ping test.  Minor refactoring — shunz / detail
  89. Fixed the uncoupled IBL airfoil+wake case.  Previously failing due to a — shunz / detail
  90. Updated IBL output functions and unit tests — shunz / detail
  91. Put new IBL output function to work in a system test — shunz / detail
  92. updated forced transition coordinate default — shunz / detail
  93. (1) Debugged and refactored hubtrace matching conditions (eqns) and — shunz / detail
  94. Debugged and refactored IBL hubtrace equation/flux formulation. — shunz / detail
  95. Refactored IBL-related machinery involving profile determination at — shunz / detail
  96. Initial solution matters in IBL cases!  Tweaked it to make test cases — shunz / detail
  97. pre merge — hcarson / detail
  98. Fixed a runtime error.  The problem was caused by using the same name — shunz / detail
  99. Cleaned PDEIBL a bit and added unit tests on hubtrace fluxes/sources — shunz / detail
  100. Relaxed IBL output unit tests given that I am currently hacking p1 for — shunz / detail
  101. Fixed error. Lesson: cannot use static members without instantiating the — shunz / detail
  102. Relaxed pyrite tolerance for clang on reynolds — shunz / detail
  103. Added high-level machinery (higher than elemental Galerkin weighted — shunz / detail
  104. Refactored logic: use cut-cell transition Galerkin weighted integral — shunz / detail
  105. Completed an initial version of cut-cell transition IBL residual --> — shunz / detail
  106. Added specialized jacobian clasess for cut-cell transition IBL — shunz / detail
  107. Got new Jacobian machinery to compile with existing no-transition IBL — shunz / detail
  108. Added a new ping test for cut-cell transition IBL.  [To be completed] — shunz / detail
  109. Fixed a bug in cut-cell elemental jacobian.  Ping test passes now :) — shunz / detail
  110. Got cut-cell machinery to work for forced transition at an element — shunz / detail
  111. Fixed interface flux at transition front.  Updated system test pyrite — shunz / detail
  112. Fix for a jacobian ping test — shunz / detail
  113. Refactored cut-cell integrandCell class. Updated system test initial — shunz / detail
  114. Fixed a bug in cut-cell transition Galerkin weighted integral: missing — shunz / detail
  115. Some cleanup — shunz / detail
  116. updated a pyrite file since the Auxi equation upwind flux changed in two — shunz / detail
  117. Added a system test case [Only works for intra cell force transition — shunz / detail
  118. Intra-cell transition is working with no explicit mass conservation at — shunz / detail
  119. Got intra-cell transition to work with explicit mass conservation. — shunz / detail
  120. Verified that forced transition at element interface still works will — shunz / detail
  121. Fixed asymmetric solution with explicit mass conservation.  [TBD] needs — shunz / detail
  122. Adding Bernstein BF for triangles and Tets — eam5515 / detail
  123. Cleaned up a system test — shunz / detail
  124. Added a toy case for examing volume ratio's effect on system — shunz / detail
  125. Renamed file.  Separated cut-cell hack of integrand cell out to a — shunz / detail
  126. Mostly cleanup and restoration — shunz / detail
  127. Switched weighting function is DG weighted residuals from original — shunz / detail
  128. Updated gitignore — shunz / detail
  129. Fixed the ill-conditioning issue with cut-cell transition IBL (when cut — shunz / detail
  130. Fixed the ill-conditioning issue with cut-cell transition IBL (when cut — shunz / detail
  131. Refactored indexing usage — shunz / detail
  132. Some cleanup — shunz / detail
  133. pre merge — hcarson / detail
  134. Revived hacks for explicit mass conservation at transition front — shunz / detail
  135. Refactored IBL transition treatment with or without explicit mass — shunz / detail
  136. Renaming for clarity — shunz / detail
  137. Refactored IBL elemental weighted residual computation so that it can — shunz / detail
  138. Minor refactoring — shunz / detail
  139. Started working on explicit mass conservation at transition front via an — shunz / detail
  140. Refactoring so that  residual machinery compiles.   Jacobian stuff to be — shunz / detail
  141. Minor refactoring for speedup — shunz / detail
  142. Implemented coupling jacobian between matching conditions/variables and — shunz / detail
  143. Fixed a bug in DOF mapping call.  Completed dummy equation/jacobian for — shunz / detail
  144. Completed jacobian w.r.t. parameters.  Jacobian ping test underway — shunz / detail
  145. minor edits — shunz / detail
  146. minor refactoring — shunz / detail
  147. Bug fix in residual cell. Other minor refactoring — shunz / detail
  148. minor refactoring — shunz / detail
  149. Fixefd a bug in jacobian param — shunz / detail
  150. Verified the new transition IBL formulation works with no explicit mass — shunz / detail
  151. Fixed ping test for transition IBL — shunz / detail
  152. Updated pyrite files.  Minor refactoring — shunz / detail
  153. cleanup — shunz / detail
  154. added windowed output — arthuang / detail
  155. changed to pressure squared output — arthuang / detail
  156. Minor refactoring — shunz / detail
  157. Refactored cut-cell determination logic to include natural transition — shunz / detail
  158. first steps toward general harmonic balance — arthuang / detail
  159. prints whether using solve or project now — hcarson / detail
  160. have a harmonic balance algebraic equation set, trying to fill out — arthuang / detail
  161. forgot to include extra typedef — arthuang / detail
  162. trying to add NS field-weighted/basis-weighted comparison — arthuang / detail
  163. fixed but in stabilized CG, field-weighted consistency check for NS — arthuang / detail
  164. enable nitsche parameters — arthuang / detail
  165. incremental HB changes — arthuang / detail
  166. working on HB residual, took lifting operator out of CG flat plate — arthuang / detail
  167. full VMS in place, bug in flux mitstate fieldweighted — arthuang / detail
  168. harmonic balance still not compiling.. — arthuang / detail
  169. Various fixes — galbramc / detail
  170. Fixed compile errors — galbramc / detail
  171. Updated transition IBL algebraic equation set to use SystemMatrixView — shunz / detail
  172. galerkin output functional now uses linearization on g, nitsche params — arthuang / detail
  173. HB getting there, just need to sort out element associativity — arthuang / detail
  174. forgot jacobian file — arthuang / detail
  175. HB working?? — arthuang / detail
  176. Working on Surrealized reference coordinate sRef for IBL transition — shunz / detail
  177. bug fixes for wake-cut — allmaras / detail
  178. minor mods to CG tecplot output (not active) — allmaras / detail
  179. added PX-to-SANS ordering for P1 quad; added better developer exception — allmaras / detail
  180. //#define --> #undef — allmaras / detail
  181. added ordering option for all applicable preconditioners — allmaras / detail
  182. the HB solution looks correct! — arthuang / detail
  183. Allows IBL parameter field (Qauxv) to be surrealized based on IBL — shunz / detail
  184. Now able to propagate Surrealized reference coordinate sRef through some — shunz / detail
  185. unit tests for linearized stabilized cg output passing — arthuang / detail
  186. Completed propagation of jacobian calculation for solution-dependent — shunz / detail
  187. moved HB toy to asymptotic unit test — arthuang / detail
  188. Refactored cut-cell elemental residual logic a little bit.  Ping tested — shunz / detail
  189. Added a test case to examine natural transition [working progress] — shunz / detail
  190. Added a BCList BoundaryGroups consistency checker — galbramc / detail
  191. Added pressure output — ursachi / detail
  192. Fixed dimension and added dimension checker — ursachi / detail
  193. Refactored IBL and GalerkinWeightedIntegral_TransitionIBL — shunz / detail
  194. added nEqn() — hcarson / detail
  195. Refactored IBL for simplicity and cleanness — shunz / detail
  196. Adding Restart Hack files — eam5515 / detail
  197. Adding correct restart files — eam5515 / detail
  198. unit tests passing for Galerkin mitstate w DC term and nitsche params — arthuang / detail
  199. Unit tests for BC input check. More MatrixDView fixes — galbramc / detail
  200. updated Galerkin unit test nb — arthuang / detail
  201. Fixed instantiations — galbramc / detail
  202. Fixed nightly error? — galbramc / detail
  203. fixed a typo — shunz / detail
  204. First success in cut-cell solution-dependent natural transition — shunz / detail
  205. generated genuine algebraic equation set for IPTF; moved explicit Ax=b — allmaras / detail
  206. Trying to fix Jenkins errors — eam5515 / detail
  207. Adding tests for LIP sensitivities. Fixed missing check in MDF ordering — galbramc / detail
  208. Added Roe1D — ursachi / detail
  209. Updates to Burgers BCs — savithru / detail
  210. Forgot files — galbramc / detail
  211. added checks for pow(0,b) — allmaras / detail
  212. Fixed ternary operator compile problem — galbramc / detail
  213. Various fixes — galbramc / detail
  214. Updated unit tests — savithru / detail
  215. added checks for pow(0,b) in Surreals — allmaras / detail
  216. Updated porous media test cases — savithru / detail
  217. generalized IPTF solver to allow for non-L2 functional minimization; — allmaras / detail
  218. Updates for Burgers — savithru / detail
  219. Fixed compile errors and Lagrange P4 CG Hex field construction — galbramc / detail
  220. removed line-length warning — allmaras / detail
  221. Updated amplification factor equation source term — shunz / detail
  222. More BC tests for Burgers and Buckley-Leverett — savithru / detail
  223. Fixed hubtrace AES residual norm calculation for transitional IBL — shunz / detail
  224. Fixed formatting — ursachi / detail
  225. Clean up — ursachi / detail
  226. Re-push — ursachi / detail
  227. Unit tests for LIP sensitivity calculations — galbramc / detail
  228. Fixed compile error — galbramc / detail
  229. Link error fixes — galbramc / detail
  230. Fixed missing includes — galbramc / detail
  231. new linesearch dump files for comparison; appears that corrected Surreal — allmaras / detail
  232. Forgot mpiexec — galbramc / detail
  233. added p6 and p7 lagrange node points — hcarson / detail
  234. trying to get thru Jenkins — arthuang / detail
  235. Added an exception — shunz / detail
  236. Actual nightly fix — galbramc / detail
  237. added output jacobians — arthuang / detail
  238. Adding unit test for restart hack as well as trying to get though — eam5515 / detail
  239. clang complains of a missing include that defines sparse-matrix — allmaras / detail
  240. made IPTF unit tests consistent with generalized Lp norm minimization — allmaras / detail
  241. preliminary avro interface — pcaplan / detail
  242. removed copied test, guard SANS_AVRO — pcaplan / detail
  243. oops — pcaplan / detail
  244. forgot copyright...its been a while since i committed to sans — pcaplan / detail
  245. changed ifld accumulation to be sqrt of a sum of squares — hcarson / detail
  246. moving to hypersonic — hcarson / detail
  247. undoing p6 and p7, don't have all the functions right now — hcarson / detail
  248. modified left BC data (from Sw=1 to Sw=0.9) to avoid machine precision — allmaras / detail
  249. Upwinding Kutta condition. Jenkins tweaks — galbramc / detail
  250. Added missing include — galbramc / detail
  251. changed left BC to (SwL=0.9) to avoid machine precision issues in BL — allmaras / detail
  252. some domain work — pcaplan / detail
  253. Tangentual Us for Kutta LIP — galbramc / detail
  254. Added std::remove for partitioning test — galbramc / detail
  255. Fixed for correct std::accumulate include — galbramc / detail
  256. Fixed warnings — galbramc / detail
  257. Played with a toy case — shunz / detail
  258. Removed duplicate instantiations — galbramc / detail
  259. Minor fixes — galbramc / detail
  260. Updated ccache path on testing machines — galbramc / detail
  261. retention of point markers and map to egads entities in EGTriangle — pcaplan / detail
  262. construction of a domain (&xfield) from avro mesh — pcaplan / detail
  263. changes to avro interface with XFieldDomain — pcaplan / detail
  264. eLfld works, removed the comment about turning it off. — hcarson / detail
  265. guard AvroEGModel in instantiation — pcaplan / detail
  266. added pringle function — hcarson / detail
  267. asan needs to be turned on in sans if turned on in avro, otherwise apple — pcaplan / detail
  268. libmeshb library linked in tests for EGTess — pcaplan / detail
  269. Working on full potential — galbramc / detail
  270. More full potential work — galbramc / detail
  271. conversion between sans XFieldDomain and avro::Mesh — pcaplan / detail
  272. apparently i changed a space in MeshAdapter — pcaplan / detail
  273. Fixed warning and compile error — galbramc / detail
  274. Fixed clang analyzer warning — galbramc / detail
  275. Bumped up unit testing time — galbramc / detail
  276. Making CG and DG field constructors consistent — galbramc / detail
  277. Tweaks to jenkins scripts — galbramc / detail
  278. renaming Estimate Galerkin to Estimate_StrongForm_Galerkin. This — hcarson / detail
  279. changing to camel case — hcarson / detail
  280. renaming cell and interior trace — hcarson / detail
  281. Simplifed Newton solver and added unit test — ursachi / detail
  282. Fixed warning — ursachi / detail
  283. Fixes to LIP and FP for Kutta and Wake — galbramc / detail
  284. changed FieldWeighted integrand to allow efldElem basis functions. — hcarson / detail
  285. more special cases for Surreal::pow — allmaras / detail
  286. Finished up making CG and DG Field constructors consistent — galbramc / detail
  287. Added vector cast multiplication — galbramc / detail
  288. changed back to absolute values for collecting LO and PDE errors. Should — hcarson / detail
  289. missing use of VectorD.h — hcarson / detail
  290. renamed old tests to StrongForm, started work on ErrorEstimate with — hcarson / detail
  291. Removed optimization and debug information from header compile check — galbramc / detail
  292. experimental changes to GLS tau — arthuang / detail
  293. added pow(0,b) tests for SurrealD — allmaras / detail
  294. new linesearch pyrite files for DG Buckley-Leverett consistent with — allmaras / detail
  295. moving to lab box — hcarson / detail
  296. convert Interior Trace to use efldElems — hcarson / detail
  297. added a second type of consistency check, recovers BasisWeighted with — hcarson / detail
  298. more consistency checks — hcarson / detail
  299. poundif back to conventional tau, to get thru Jenkins — arthuang / detail
  300. Nightly fixes — galbramc / detail
  301. Increased ccache size — galbramc / detail
  302. Another MKL valgrind suppression — galbramc / detail
  303. changed galerkin mitstate integrand to nitsche, updated unit test — arthuang / detail
  304. changed over a lot of integrands to the new field weighted, the — hcarson / detail
  305. turned off tecplot dump in galerkin moess — arthuang / detail
  306. Fixed compiler warnings — galbramc / detail
  307. pre merge — hcarson / detail
  308. Surreal cleanup with new pow around 0 logic — galbramc / detail
  309. bug fix for dK/dUx term in stabilized CG — arthuang / detail
  310. experimental GLS tau — arthuang / detail
  311. sandbox tweak — arthuang / detail
  312. CG local solves extract sub-matrix — galbramc / detail
  313. Refactored ping test function error logic — shunz / detail
  314. Updates for new homebrew boost-python naming convention — galbramc / detail
  315. Fixes for OSX — galbramc / detail
  316. Only set boost-python suffix on APPLE — galbramc / detail
  317. More intel valgrind suppressions — galbramc / detail
  318. stabilized cell works, added estimate vary consistency check — hcarson / detail
  319. Galerkin disc folder working again — hcarson / detail
  320. Error Estimate folder passing — hcarson / detail
  321. moved disc object out of fieldbundle. every AES will have a disc — arthuang / detail
  322. forgot generic disc for Galerkin, DGAdv — arthuang / detail
  323. abs to fabs — hcarson / detail
  324. More tests for Vector-Vector multiplication — galbramc / detail
  325. Removed PROCESSOR_COUNT and CMake is way faster on OSX now — galbramc / detail
  326. Some more CMake cleanup — galbramc / detail
  327. forgot to change an interface — hcarson / detail
  328. Fixed ProcessorCount for OSX, but we don't use it at the moment — galbramc / detail
  329. camel case bug — hcarson / detail
  330. unsigned int comparison warnings — hcarson / detail
  331. reverting src/Meshing to the main branch versions — hcarson / detail
  332. Fixed intel optimization uninitialized data bug (bug in intel compiler) — galbramc / detail
  333. forgot another one — hcarson / detail
  334. sandbox tests compiling — arthuang / detail
  335. Suppress analyzier warning — galbramc / detail
  336. removed the memory leak — hcarson / detail
  337. Removed unnessesary includes — galbramc / detail
  338. Fixed one more memory leak — galbramc / detail
  339. put back constructors without disc object — arthuang / detail
  340. reverted unit test to not use disc — arthuang / detail
  341. Added more checks for finding refine, and the optional automatic build — galbramc / detail
  342. removing loop over pde index — hcarson / detail
  343. Better EGADS specification for refine — galbramc / detail
  344. Fixed logic whether to build refine — galbramc / detail
  345. added mach number derived quantity output for 3D NS — hcarson / detail
  346. Fixed link problems when building refine — galbramc / detail
  347. Fixes for DeltaWing — galbramc / detail
  348. Reverted PETSc build back to 3.8.4 as the transpose solve broke in 3.9.* — galbramc / detail
  349. new stabilizationMatrix seems to be working! no PDE template — arthuang / detail
  350. Added missing ifdef SANS_PETSC — galbramc / detail
  351. some function calls changed to references — arthuang / detail
  352. reverting to develop — hcarson / detail
  353. filing system tweaks and petsc parameters — hcarson / detail
  354. minor tweaks to get thru Jenkins — arthuang / detail
  355. Added warnings to not use PETSc 3.9 for now — galbramc / detail
  356. Added jzavala@mit.edu to DeveloperEmailAddresses — jzavala / detail
  357. Extrapolated nt growth source term in turbulent sub-element.  Working — shunz / detail
  358. minor cleanup — shunz / detail
  359. Updated initial guess.  Enabled restarted solution from a previous — shunz / detail
  360. BuildREFINE uses new --with-OpenCASCADE flag — galbramc / detail
  361. Fixed memory leak — galbramc / detail
  362. Updated pyrite files — shunz / detail
  363. IBL PDE cleanup.  Started working on upwinding at transition — shunz / detail
  364. Implemented upwinding at transition front.  Added/update pyrite check — shunz / detail
  365. Fixed warnings about uninitialized data — shunz / detail
  366. minor cleanup — shunz / detail
  367. Added unit tets for reference element mesh — galbramc / detail
  368. Fixed array out of bounds error for reference element mesh — galbramc / detail
  369. Refactored PDEIBL implementation.  In particular, relocated hubtrace — shunz / detail
  370. Cleaning up Restart file read in to not need two reads, added Partition — eam5515 / detail
  371. Refactored PDEIBL and added plenty of unit tests — shunz / detail
  372. Patch unit tests for IBL BC — shunz / detail
  373. Cleaned up more IBL unit tests — shunz / detail
  374. FIxed a bug in panel equation residual norm calculation.  Plenty of — shunz / detail
  375. Retired some unit tests.  Added missing include — shunz / detail
  376. Turned off some old unit tests — shunz / detail
  377. minor cleanup, added some interfaces to ndconverts — arthuang / detail
  378. Refactored ctau numerical flux when transition happens at an interior — shunz / detail
  379. Disentangled cut-cell transition IBL machinery with the rest so that — shunz / detail
  380. Fixed a test case — shunz / detail
  381. relaxed torlerance — shunz / detail
  382. relaxed tolerances — shunz / detail
  383. Revived the stagnation flow test for laminar BL — shunz / detail
  384. Refactored stagnation flow laminar BL cases — shunz / detail
  385. Turned off a verbose printout — shunz / detail
  386. Cleaned up CodeConsistency system test cases for IBL — shunz / detail
  387. Fixed warnings etc. — shunz / detail
  388. Relaxed tolerances.  Fixed warnings — shunz / detail
  389. Removed an obsolete toy case — shunz / detail
  390. Relaxed tolerance — shunz / detail
  391. Fixed warning — shunz / detail
  392. Added explicit instantiations to fix gnu compiler errors — shunz / detail
  393. Separated template methods into implementation header — shunz / detail
  394. Removed template keywords — shunz / detail
  395. Minor refactoring — shunz / detail
  396. Added missing template to the delight of gnu8 — shunz / detail
  397. Added explicit instantiations.  Fixed unused variable warnings — shunz / detail
  398. One more attempt — shunz / detail
  399. Added a missing instantiation — shunz / detail
  400. Missed typename keyword — shunz / detail
  401. missed template keyword — shunz / detail
  402. Removed an troublesome solution order case — shunz / detail
  403. sans interface to avro complete, sandbox case for AD, doesnt really work — pcaplan / detail
  404. Added missing instantiations for python Dict parameter get — shunz / detail
  405. Fixed warnings/errors — shunz / detail
  406. added instantiations — shunz / detail
  407. Relaxed tolerances for intel — shunz / detail
  408. fixed warnings and style — pcaplan / detail
  409. moved order of links in CMakeLists for AFLR — pcaplan / detail
  410. missing link to avroLib in Adaptation/MOESS — pcaplan / detail
  411. Relaxed tolerances for release_intel18 — shunz / detail
  412. Replaced M_PI with PI — galbramc / detail
  413. AdaptationLib needs link to TetGenLib too since XFieldDomain uses it — pcaplan / detail
  414. more missing links, this time in system/adaptation — pcaplan / detail
  415. more missing links — pcaplan / detail
  416. bumped EGTessLib before SANS_TETGENLIB — pcaplan / detail
  417. setting geometry in domain — pcaplan / detail
  418. link in TAO optimizer too......... — pcaplan / detail
  419. Minor naming refactoring — shunz / detail
  420. minor cleanup — shunz / detail
  421. setting up a case to examine whether cut-cell IBL residual is smooth — shunz / detail
  422. changed Euclidian to the more typical spelling Euclidean — hcarson / detail
  423. forgot two — hcarson / detail
  424. Added printout in Newton solver — shunz / detail
  425. minor changes in soln function, output. changed tau inverse to LUP — arthuang / detail
  426. Added ugrid reader. Fixed some cmake bugs — galbramc / detail
  427. Fixed warning — galbramc / detail
  428. Updates for the latest version of EPIC. NodeMovement is now effective in — galbramc / detail
  429. Dissable AFLR4 for LIPSolver — galbramc / detail
  430. Added and tried full upwinding in IBL pde flux and and transition front — shunz / detail
  431. Gmsh can now copy partitions — galbramc / detail
  432. Small fix for gmsh — galbramc / detail
  433. Various updates and fixes — galbramc / detail
  434. Fixes for runing Q2 HCH — galbramc / detail
  435. HCH updates for new EPIC — galbramc / detail
  436. completed ns jacobian flux viscous unit test — arthuang / detail
  437. Fixed parallel tecplot dumps — galbramc / detail
  438. fixes to errororder nightly — arthuang / detail
  439. Tweaks for MinGW — galbramc / detail
  440. Updated gmsh writer so each BC is displayed independently in gmsh GUI — galbramc / detail
  441. Added directory creation for HCH — galbramc / detail
  442. Updated dummy variable values.  Added and turned off some hacks — shunz / detail
  443. Updated toy case that examines residual smoothness of cut-cell — shunz / detail
  444. added LUP solve for surreal1 — arthuang / detail
  445. Different initial qualeties for EPIC 2D vs 3D — galbramc / detail
  446. Updated toy case to examine cut-cell IBL residual smoothness — shunz / detail
  447. turned off a state validity check that is being developed — shunz / detail
  448. Updates for compiling with mingw — galbramc / detail
  449. Refafored IBL upwind flux to accommodate mit-state inflow BC, along with — shunz / detail
  450. Reverted a pyrite file — shunz / detail
  451. BOOST_DATA_TEST_CASE is not available on older versions of BOOST (e.g. — shunz / detail
  452. Forgot that some outdated pyrite files were deleted — shunz / detail
  453. Reorded matching conditions at transition front — shunz / detail
  454. relaxed tolerance — shunz / detail
  455. minor tweaks — arthuang / detail
  456. Tweaks to boost and cblas — galbramc / detail
  457. Reorded matching equations in unit test — shunz / detail
  458. Updated assertion — shunz / detail
  459. playing with toy case — shunz / detail
  460. Renamed a function to avoid misuse — shunz / detail
  461. Added MKL as an option to sansLIP solver — galbramc / detail
  462. Fixed unit test — shunz / detail
  463. Added ugrid reader unit test — galbramc / detail
  464. Fixed missing call to base class constructor in XField_ugrid — galbramc / detail
  465. minor refactoring — shunz / detail
  466. mod'd solution fcn, test cases — arthuang / detail
  467. format error fixed — arthuang / detail
  468. another stupid format error — arthuang / detail
  469. minor refactoring — shunz / detail
  470. revert BN BC to original formulation — arthuang / detail
  471. added HB unit test, fixed format — arthuang / detail
  472. order of cmake file wrong? — arthuang / detail
  473. new hb unit tests — arthuang / detail
  474. modified ojeda soln fcn — arthuang / detail
  475. remove adjoint dumps from CG MOESS — arthuang / detail

#226 (May 26, 2018, 1:52:11 AM)

  1. Cleaning up potential flow — galbramc / detail
  2. Minor fixes — galbramc / detail
  3. Working on stability derivatives — galbramc / detail
  4. Updates for stability derivatives for LIP — galbramc / detail
  5. More work on stability derivatives — galbramc / detail
  6. Fixed instantiation — galbramc / detail
  7. Changed vectors to vector view in algebraic equation sets — galbramc / detail
  8. PETSc updates with Vector View — galbramc / detail
  9. Updated Matrix View for algebraic equation sets as well — galbramc / detail
  10. Minimize dependencies for LIP aim — galbramc / detail
  11. Added timings for UMFPACK — galbramc / detail
  12. Upates to sensitvity calculations — galbramc / detail

#225 (May 19, 2018, 1:52:11 AM)

  1. Cleaning up potential flow — galbramc / detail
  2. Minor fixes — galbramc / detail
  3. Working on stability derivatives — galbramc / detail
  4. Updates for stability derivatives for LIP — galbramc / detail
  5. More work on stability derivatives — galbramc / detail
  6. Fixed instantiation — galbramc / detail
  7. Changed vectors to vector view in algebraic equation sets — galbramc / detail
  8. PETSc updates with Vector View — galbramc / detail
  9. Updated Matrix View for algebraic equation sets as well — galbramc / detail

#224 (May 12, 2018, 8:42:24 AM)

  1. added euler soln functions for shocked nozzle, backpressure — arthuang / detail
  2. brought jacobianFluxViscous subfunction back — arthuang / detail
  3. relax tol for intel — arthuang / detail
  4. added solution fcn unit test — arthuang / detail
  5. trying to get solution function working with spacetime — arthuang / detail
  6. rolled back function stuff, getting rid of unneeded ST BC — arthuang / detail
  7. added getEulerTraits, adapt is running — arthuang / detail
  8. additional instantiations, added missing spacetime specialization — arthuang / detail
  9. have space and spacetime BCs working again — arthuang / detail
  10. nozzle bdf is compiling.. not sure if AV is working — arthuang / detail
  11. forgot teh actual sandbox toy — arthuang / detail
  12. removed unneeded templating, BDF getting closer... — arthuang / detail
  13. Nozzle BDF is working! — arthuang / detail
  14. added dumps and timings — arthuang / detail
  15. convergedResidual, decreasedResidual and atMachinePrecision now take in — blsc / detail
  16. tweak to soln function unit test — arthuang / detail
  17. Bug in custom jacobian — blsc / detail
  18. Just some formatting cleanup — galbramc / detail
  19. Updates cases that only run with MPI / PETSc — blsc / detail
  20. Minor refactoring for speedup — shunz / detail
  21. Upgraded PETSc version — galbramc / detail
  22. Removed some variable length arrays. Fixes for g++ 8 — galbramc / detail
  23. Updates for clang 5.0 on Linux — galbramc / detail
  24. Minor cleanup — galbramc / detail
  25. Added solver interface for DG Advective — ursachi / detail
  26. Testing of DG Advective solver interface — ursachi / detail
  27. Some cleanup of full potential. Added moment outputs. — galbramc / detail
  28. Fixes for Solve1D_DGAdvective_AR_toy — galbramc / detail
  29. Fixed variable length arrays — galbramc / detail
  30. Fixed array out of bounds — galbramc / detail
  31. Removed variable lenght arrays. Woking on LIP. — galbramc / detail
  32. Removed redundant body copy — galbramc / detail
  33. Fixed a fiew missing variable lenght arrays — galbramc / detail
  34. Fixed uninitialized warning — galbramc / detail
  35. Fixed mistake — galbramc / detail

#223 (May 5, 2018, 1:52:12 AM)

  1. Enabled pseudo-time continuation for space-time problems + with separate — savithru / detail
  2. Updated test cases — savithru / detail
  3. Working on cleaning up functionals a bit — galbramc / detail
  4. Fixed warning — galbramc / detail
  5. Updated gitignore — shunz / detail
  6. Working on cleaning up functionals — galbramc / detail
  7. Fixed dimension bug in outputs — ursachi / detail
  8. minor refactoring — shunz / detail

#222 (Apr 28, 2018, 8:20:59 AM)

  1. add p-seq — arthuang / detail
  2. minor CG edits — arthuang / detail
  3. fixed bug in 2D jacobianGradientSource — arthuang / detail
  4. debugging jacobianfluxviscous — arthuang / detail
  5. working on fluxjacobianviscous — arthuang / detail
  6. working on fluent 2d file write — arthuang / detail
  7. added PtHa BN bc, debugged fluent file writer — arthuang / detail
  8. added PtHa solution function — arthuang / detail
  9. bug fix for BN PtHa — arthuang / detail
  10. no contribution to lifting operator resid for non-visc bc — arthuang / detail
  11. sandbox edits — arthuang / detail
  12. change NS solution mitstate to inviscid implementation, added Pt BN — arthuang / detail
  13. merge conflicts, also added MassFlux output — arthuang / detail
  14. new WBWT sandbox — arthuang / detail
  15. added RANS exclusion to btest length, mods for WBWT solve — arthuang / detail
  16. added RANS2D w source term. — arthuang / detail
  17. modified source — arthuang / detail
  18. minor edit to usersource — arthuang / detail
  19. added 3D user source rans — arthuang / detail
  20. forgot a file — arthuang / detail
  21. working towards 3D rans w source term — arthuang / detail
  22. minor mods — arthuang / detail
  23. added 1D stab cg adjoint convergence tests — arthuang / detail
  24. merge — arthuang / detail
  25. further exploring 1D supg — arthuang / detail
  26. adding stabilization to the strong form integrand. — hcarson / detail
  27. forgot to hide stab from the agnostic constructors — hcarson / detail
  28. indexing bug with order increaser — hcarson / detail
  29. switch from std::set to std::vector — hcarson / detail
  30. speed ups for EdgeLocal. For DG 40% faster than elemental now — hcarson / detail
  31. speed ups for EdgeLocal. For DG 40% faster than elemental now — hcarson / detail
  32. working towards 3D XField_EdgeLocal — hcarson / detail
  33. a slightly bigger unsplit test — hcarson / detail
  34. forgot some files from the edgeLocal speed up — hcarson / detail
  35. set a proper exception in ErrorModel.cpp, also caught a few forgotten — hcarson / detail
  36. tweaks to solutions and bcs — hcarson / detail
  37. added constructors that take in FieldBundles, in order to keep — hcarson / detail
  38. forgot to add stabilization parameter — hcarson / detail
  39. some debug stuff and an additional WriteMatrixMarketFile method — hcarson / detail
  40. forgot to comment out Nitsche params, and added fieldwweighted Dirichlet — hcarson / detail
  41. forgot to remove dumping to tmp — hcarson / detail
  42. dev excepting body out because doesn't have test yet — hcarson / detail
  43. commenting out untested bit in strongform — hcarson / detail
  44. added a fix to set normalSignL for 1D meshes — hcarson / detail
  45. Added a finite-volume (with two-point flux approx) AlgEqnSet — savithru / detail
  46. Added some jacobian tests for FV_TPFA — savithru / detail
  47. Added Solve2D_FV_BDF case for two-phase problem — savithru / detail
  48. Updated Galerkin cell outputs to work in parallel — savithru / detail
  49. Updated FV test case — savithru / detail
  50. Fixed wrong include — savithru / detail
  51. Test case updates — savithru / detail
  52. #if petsc things — hcarson / detail
  53. working on edge grids, fixed a bug in 1D with unassigned normal — hcarson / detail
  54. some placeholder/developer excepted methods so that I could compile — hcarson / detail
  55. general clean up — hcarson / detail
  56. stabilization needed for Euler tests — hcarson / detail
  57. switch based on Neighborhood, added some more LocalSolve tests — hcarson / detail
  58. switched to static constexpr values for spaceType rather than a method — hcarson / detail
  59. weird bit of attempted metaprogramming, wasn't needed in the end but — hcarson / detail
  60. spaceType() to spaceType fixes — hcarson / detail
  61. some Advection Reaction adapt toys — hcarson / detail
  62. Some Euler adapts. Still pretty suspicious of them both, but they run — hcarson / detail
  63. a 1D Galerkin AD adapt — hcarson / detail
  64. an Alg EqSet test for Euler — hcarson / detail
  65. merge — arthuang / detail
  66. airfoil case — arthuang / detail
  67. added an exact solution for the characteristic AdvectionReaction case — hcarson / detail
  68. added missing NoneBC for use in ErrorEstimate_Galerkin's undo boundary — hcarson / detail
  69. Test case updates — savithru / detail
  70. converted all SANS_ASSERT to SANS_ASSERT_MSG — allmaras / detail
  71. modified integrand so PDE IPB terms and strong-form BCs are more clear; — allmaras / detail
  72. added blunt-TE NACA test case; small mods to existing IPTF test cases — allmaras / detail
  73. Minor fix — savithru / detail
  74. Added cosine-wave permeability field — savithru / detail
  75. removed AdvectionReaction analytic function, and then fixed up ASExp to — hcarson / detail
  76. local Solve directory was working — hcarson / detail
  77. AlgEqSets now working for p1-3 and more configurations. Also the Euler — hcarson / detail
  78. general clean up, and hopefully boosted the coverage a little — hcarson / detail
  79. forgot to not write jacobians to tmp, and also an AR DGBR2 adapt and — hcarson / detail
  80. boosting coverage and fixing jenkins complaint for code that I hadn't — hcarson / detail
  81. Q1D source term up and running — arthuang / detail
  82. edits to CG AD toy — arthuang / detail
  83. it compiles! Now for unit tests — hcarson / detail
  84. minor updates — arthuang / detail
  85. super basic split a single tet test passes! — hcarson / detail
  86. Fixed bug in AVSensor_ViscousFlux1D for space-time diffusion — savithru / detail
  87. bug fix — hcarson / detail
  88. a more complicated test with new interior traces — hcarson / detail
  89. coverage hunting — hcarson / detail
  90. getting close to spacetime Q1DEuler — arthuang / detail
  91. mpi communicators are now actually being passed in the constructor — hcarson / detail
  92. changed BCTypeFlux that wasn't being used so it can specify inflow and — hcarson / detail
  93. had to add 1d and 3d, and also bits and pieces comments wise — hcarson / detail
  94. Updated heterogeneity in test cases — savithru / detail
  95. added double flux eval testing — hcarson / detail
  96. changes towards being able to expose ErrorEstimates at SolverInterface — hcarson / detail
  97. tweaking some of the accessors — hcarson / detail
  98. changed the virtual function. Fixed someone using {} instead of a — hcarson / detail
  99. changed the virtual function. Fixed someone using {} instead of a — hcarson / detail
  100. turns out can't just in time construct estimates, because member const — hcarson / detail
  101. Updated IntegrandCell_FV_TPFA to use GalerkinWeightedIntegral_New — savithru / detail
  102. Changes to Buckley-Leverett AV BCs — savithru / detail
  103. More test case updates — savithru / detail
  104. moving toward spacetime q1d euler — arthuang / detail
  105. Added p-sequencing to heterogeneous test case — savithru / detail
  106. Missing robustness term added — blsc / detail
  107. Added 1D AV adaptive nozzle — ursachi / detail
  108. Filled in line search unit test — ursachi / detail
  109. hunting coverage — hcarson / detail
  110. Added deleted functions — ursachi / detail
  111. Various updates. Added FP control surface deflection — galbramc / detail
  112. Test case update — savithru / detail
  113. Merge conflict fix — savithru / detail
  114. Includes for MPI communicator — savithru / detail
  115. Updated tests — savithru / detail
  116. Fixed residinterp and nMonitor in PDEEuler1D — savithru / detail
  117. Fixes for CauchyRiemann — galbramc / detail
  118. added a tolerance for Reynolds — hcarson / detail
  119. Minor cleanup of adaptive nozzle case — ursachi / detail
  120. Fixed when unit test file is checked — ursachi / detail
  121. Modified AV source terms to allow for different activation ranges — savithru / detail
  122. Fixed compile error — galbramc / detail
  123. Fixed warnings — ursachi / detail
  124. Unified Buckley-Leverett AV BCs + updated unit-tests — savithru / detail
  125. Unifying twophase AV BCs — savithru / detail
  126. dictionary option for silencing the 'Primal solve time:' etc, for use in — hcarson / detail
  127. added additional template arguments so can be used in boundary — hcarson / detail
  128. pre merge — hcarson / detail
  129. added function weighted boundary output, and a very simple test — hcarson / detail
  130. forgot to include the templating changes in the tests 2 commits ago — hcarson / detail
  131. typos — hcarson / detail
  132. put the option in the wrong dictionary, and also added another link — hcarson / detail
  133. a jacobian functional test. — hcarson / detail
  134. Unified twophase AV BCs + added more unit-tests — savithru / detail
  135. Cleaning up adaptation toys — savithru / detail
  136. Updated unit-tests — savithru / detail
  137. Fixed compiler warnings — ursachi / detail
  138. Fixed link error — galbramc / detail
  139. Forgot to update some cases — savithru / detail
  140. boundary output functional estimate case. Currently not working — hcarson / detail
  141. two tests for computing output functionals via dispatch. Neither working — hcarson / detail
  142. two tests for computing output functionals via dispatch. Neither working — hcarson / detail
  143. Minor updates — galbramc / detail
  144. a lot of additional boundary functionals for AD — hcarson / detail
  145. broke into separate files — hcarson / detail
  146. removed tests that wouldn't work, made an actual dispatch test, it — hcarson / detail
  147. removed algEqSet, just testing the dispatcher now — hcarson / detail
  148. Primal strong form cell error estimates — hcarson / detail
  149. strong form interior trace integrand — hcarson / detail
  150. Working on boundary functionals — galbramc / detail
  151. Added a DG P0 GenHField + unit-tests — savithru / detail
  152. Switching from smoothabs to smoothmax may have just fixed our AV — savithru / detail
  153. Forgot methematica file — galbramc / detail
  154. Fixed nightly link error — galbramc / detail
  155. Minor fix — galbramc / detail
  156. AV working much better with max in AV PDE — arthuang / detail
  157. split up BCEuler into two files to make vera happy — arthuang / detail
  158. Updates for SuitesSparse library dependencies — galbramc / detail
  159. Removed static boost libraries — galbramc / detail
  160. Made suitesparse metis library optional — galbramc / detail
  161. Separated out EGADS tessellation into a separate library — galbramc / detail
  162. Forgot one cmake file — galbramc / detail
  163. found bug in 2D RANSSA unit test — arthuang / detail
  164. updated unit tests to conform to max in AV — arthuang / detail
  165. missed an instantiation — arthuang / detail
  166. Added ParamFieldBuilder for GenH_DG + unit-tests — savithru / detail
  167. Updated sandbox toys — savithru / detail
  168. added accumulation unit tests, also some missing BC unit tests — arthuang / detail
  169. Minor cleanup — galbramc / detail
  170. fixed uninitialized data, struct warning — arthuang / detail
  171. resolve merge conflicts, apply AV max change to 2D, 3D Euler — arthuang / detail
  172. Removed Euler/DBR2 instantiations — galbramc / detail
  173. No false results during unit tests, but might not work — blsc / detail
  174. Moved precision check into algebraic equation set, it might be broken — blsc / detail
  175. Better logic — blsc / detail
  176. More tidying — blsc / detail
  177. Minor formatting and performance cleanup — galbramc / detail
  178. Fix some issues Jenkins found — blsc / detail
  179. More fixes for Jenkins — blsc / detail
  180. Another fix — blsc / detail
  181. Missing override — blsc / detail
  182. Small fixes — galbramc / detail
  183. Fixed typo — galbramc / detail
  184. Undo template change — galbramc / detail

#221 (Apr 21, 2018, 8:41:35 AM)

  1. Trying to build a non-block Euler Q1D nozzle case — blsc / detail
  2. Missing instantiations and some code updates — blsc / detail
  3. Sandbox compiles and runs — blsc / detail
  4. Minor cleanups — galbramc / detail
  5. Some AIM cleanup — galbramc / detail
  6. Fixed a bug in PDEEulerQ1D_ArtificialViscosity — blsc / detail
  7. Fixed an integration test and added another required instantiation — blsc / detail
  8. Another missing instantiation — blsc / detail
  9. Working on CAPS LIP coupling — galbramc / detail
  10. Updates for CAPS data transfer with LIP — galbramc / detail
  11. Fixed compiler errors (appearing on MacOS 10.13 but passing under — shunz / detail
  12. Fixed more missing keywords — shunz / detail
  13. Fixed OSX clang 9.1.0 error — galbramc / detail
  14. LIP CAPS interfaces seems to work even better now — galbramc / detail
  15. Added precompiled parmetis to macys for jenkins — galbramc / detail
  16. bug fix in 1d embedding mesher — pcaplan / detail
  17. trigger build — pcaplan / detail
  18. Various cleanup for line search and cmake — galbramc / detail
  19. trigger commit — pcaplan / detail
  20. trigger commit — pcaplan / detail
  21. non-uniform mesh sizing unit test for 1d embedding mesher — pcaplan / detail
  22. Xcode is now automatically configured with Xcode in the build directory — galbramc / detail
  23. Setting up CMake build of boost — galbramc / detail
  24. Added functionatiliy to automatically download and compile ESP — galbramc / detail
  25. More EGADS build fixes — galbramc / detail
  26. Fixed typo — galbramc / detail
  27. Refactored ResidualCell_Galerkin to use the GalerkinWeightedIntegral_New — shunz / detail
  28. Updates so AFLR3 meshes are consitent with EGTessModel — galbramc / detail
  29. Refactored one more integrand cell class — shunz / detail
  30. Typo fix — shunz / detail
  31. That didn't work... — galbramc / detail
  32. More udf for FP — galbramc / detail
  33. Various cleanup — galbramc / detail
  34. Missed a few — galbramc / detail
  35. One more fix — galbramc / detail
  36. Missed one more — galbramc / detail
  37. Added some LIP debug info — galbramc / detail
  38. Updated artificial viscosity naming and unit tests for flux accumulation — blsc / detail
  39. More cleanup for LIP — galbramc / detail