Started by upstream project "SANS_avro_poll" build number 55 originally caused by: Started by an SCM change Running as SYSTEM [EnvInject] - Loading node environment variables. Building remotely on reynolds in workspace /jenkins/workspace/SANS_avro [WS-CLEANUP] Deleting project workspace... [WS-CLEANUP] Done The recommended git tool is: NONE using credential 3614a4cf-01de-4393-97de-73734b7dd5a2 > git rev-parse --resolve-git-dir /jenkins/workspace/SANS_avro/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.acdl.url ssh://jenkins@acdl.mit.edu/home/svnroot/SANSproto/ # timeout=10 Pruning obsolete local branches Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 Fetching upstream changes from ssh://jenkins@acdl.mit.edu/home/svnroot/SANSproto/ > git --version # timeout=10 > git --version # 'git version 2.25.1' using GIT_SSH to set credentials > git fetch --tags --force --progress --prune -- ssh://jenkins@acdl.mit.edu/home/svnroot/SANSproto/ +refs/heads/*:refs/remotes/acdl/* # timeout=10 > git rev-parse acdl/develop^{commit} # timeout=10 Checking out Revision e19c47a63fbbd9f771ed0066b6481693f301e089 (acdl/develop) > git config core.sparsecheckout # timeout=10 > git checkout -f e19c47a63fbbd9f771ed0066b6481693f301e089 # timeout=10 Commit message: "Mechanical power correction" > git rev-list --no-walk e19c47a63fbbd9f771ed0066b6481693f301e089 # timeout=10 The recommended git tool is: NONE using credential 3614a4cf-01de-4393-97de-73734b7dd5a2 > git rev-parse e19c47a63fbbd9f771ed0066b6481693f301e089^{commit} # timeout=10 The recommended git tool is: NONE using credential 3614a4cf-01de-4393-97de-73734b7dd5a2 [GitCheckoutListener] Recording commits of 'git ssh://jenkins@acdl.mit.edu/home/svnroot/SANSproto/' [GitCheckoutListener] Found previous build 'SANS_avro #65' that contains recorded Git commits [GitCheckoutListener] -> Starting recording of new commits since 'e19c47a' [GitCheckoutListener] -> Using head commit 'e19c47a' as starting point [GitCheckoutListener] -> Git commit decorator could not be created for SCM 'hudson.plugins.git.GitSCM@34f2bcde' [GitCheckoutListener] -> No new commits found No emails were triggered. Triggering SANS_avro » release_intel,reynolds Triggering SANS_avro » release_gnu9,reynolds Triggering SANS_avro » release_clang,reynolds Triggering SANS_avro » release_gnu11,reynolds Triggering SANS_avro » release_gnu10,reynolds SANS_avro » release_intel,reynolds completed with result SUCCESS SANS_avro » release_gnu9,reynolds completed with result SUCCESS SANS_avro » release_clang,reynolds completed with result SUCCESS SANS_avro » release_gnu11,reynolds completed with result SUCCESS SANS_avro » release_gnu10,reynolds completed with result SUCCESS Email was triggered for: Success Sending email for trigger: Success Sending email to: allmaras@mit.edu galbramc@mit.edu darmofal@mit.edu pcaplan@mit.edu arthuang@mit.edu savithru@mit.edu hcarson@mit.edu blsc@mit.edu shunz@mit.edu dmw72@psu.edu eam5515@psu.edu kug46@psu.edu ursachi@mit.edu cfrontin@mit.edu jzavala@mit.edu mlarocca@mit.edu ksabo@mit.edu vpr11@mit.edu jta29@psu.edu waligura@mit.edu cwomack@mit.edu deanna.sewell@colorado.edu [PostBuildScript] - [INFO] Executing post build scripts. [SANS_avro] $ /bin/bash -xe /tmp/jenkins9707040279127857005.sh + cd /home/jenkins/util/avro/ + git pull From https://gitlab.com/philipclaude/avro 2343aa7..94a77e7 main -> origin/main 9d40245..c04103b philip -> origin/philip Updating 2343aa7..94a77e7 Fast-forward COPYRIGHT.txt | 2 +- README.md | 2 +- src/bin/adapt.cpp | 2 +- src/bin/arguments.cpp | 2 +- src/bin/avro.cpp | 2 +- src/bin/conformity.cpp | 2 +- src/examples/adapt_custom_geometry.cpp | 2 +- src/examples/adapt_parallel.cpp | 2 +- src/examples/adapt_serial.cpp | 2 +- src/examples/laguerre.cpp | 2 +- src/include/avro_config.h.in | 2 +- src/include/avro_types.h | 2 +- src/lib/adaptation/adapt.cpp | 2 +- src/lib/adaptation/adapt.h | 2 +- src/lib/adaptation/cavity.cpp | 2 +- src/lib/adaptation/cavity.h | 2 +- src/lib/adaptation/collapses.cpp | 2 +- src/lib/adaptation/filter.cpp | 2 +- src/lib/adaptation/filter.h | 2 +- src/lib/adaptation/geometry.cpp | 2 +- src/lib/adaptation/geometry.h | 2 +- src/lib/adaptation/implied_metric.cpp | 2 +- src/lib/adaptation/implied_metric.h | 2 +- src/lib/adaptation/insertions.cpp | 2 +- src/lib/adaptation/metric.cpp | 2 +- src/lib/adaptation/metric.h | 2 +- src/lib/adaptation/parallel.cpp | 2 +- src/lib/adaptation/parallel.h | 2 +- src/lib/adaptation/primitive.cpp | 2 +- src/lib/adaptation/primitive.h | 2 +- src/lib/adaptation/properties.cpp | 2 +- src/lib/adaptation/properties.h | 2 +- src/lib/adaptation/smoothing.cpp | 2 +- src/lib/adaptation/swaps.cpp | 2 +- src/lib/common/array.h | 2 +- src/lib/common/crypto.cpp | 2 +- src/lib/common/crypto.h | 2 +- src/lib/common/directory.h | 2 +- src/lib/common/error.cpp | 2 +- src/lib/common/error.h | 2 +- src/lib/common/graph.h | 2 +- src/lib/common/json.h | 2 +- src/lib/common/kdtree.cpp | 2 +- src/lib/common/kdtree.h | 2 +- src/lib/common/mpi.hpp | 2 +- src/lib/common/nearest_neighbours.cpp | 2 +- src/lib/common/nearest_neighbours.h | 2 +- src/lib/common/parallel_for.h | 2 +- src/lib/common/parallel_for.hpp | 2 +- src/lib/common/process.h | 2 +- src/lib/common/process_cpu.cpp | 2 +- src/lib/common/process_gpu.cpp | 2 +- src/lib/common/process_mpi.cpp | 2 +- src/lib/common/set.h | 2 +- src/lib/common/table.h | 2 +- src/lib/common/thread.h | 2 +- src/lib/common/tools.cpp | 4 ++-- src/lib/common/tools.h | 2 +- src/lib/common/tree.h | 2 +- src/lib/common/tree.hpp | 2 +- src/lib/element/basis.cpp | 2 +- src/lib/element/basis.h | 2 +- src/lib/element/bernstein_line.cpp | 2 +- src/lib/element/bernstein_pentatope.cpp | 2 +- src/lib/element/bernstein_tetrahedron.cpp | 2 +- src/lib/element/bernstein_triangle.cpp | 2 +- src/lib/element/element.cpp | 2 +- src/lib/element/element.h | 2 +- src/lib/element/lagrange_line.cpp | 2 +- src/lib/element/lagrange_nodes.cpp | 2 +- src/lib/element/lagrange_nodes.h | 2 +- src/lib/element/lagrange_pentatope.cpp | 2 +- src/lib/element/lagrange_tetrahedron.cpp | 2 +- src/lib/element/lagrange_triangle.cpp | 2 +- src/lib/element/legendre_line.cpp | 2 +- src/lib/element/legendre_pentatope.cpp | 2 +- src/lib/element/legendre_tetrahedron.cpp | 2 +- src/lib/element/legendre_triangle.cpp | 2 +- src/lib/element/polytope.cpp | 2 +- src/lib/element/polytope.h | 2 +- src/lib/element/quadrature.cpp | 2 +- src/lib/element/quadrature.h | 2 +- src/lib/element/quadrature_cp.h | 2 +- src/lib/element/reference.cpp | 2 +- src/lib/element/reference.h | 2 +- src/lib/element/simplex.cpp | 2 +- src/lib/element/simplex.h | 2 +- src/lib/element/trace2cell.cpp | 2 +- src/lib/element/trace2cell.h | 2 +- src/lib/element/transfer.hpp | 2 +- src/lib/geometry/body.cpp | 2 +- src/lib/geometry/body.h | 2 +- src/lib/geometry/egads/body.cpp | 2 +- src/lib/geometry/egads/body.h | 2 +- src/lib/geometry/egads/context.cpp | 2 +- src/lib/geometry/egads/context.h | 2 +- src/lib/geometry/egads/data.cpp | 2 +- src/lib/geometry/egads/data.h | 2 +- src/lib/geometry/egads/egads_fwd.h | 2 +- src/lib/geometry/egads/model.cpp | 2 +- src/lib/geometry/egads/model.h | 2 +- src/lib/geometry/egads/object.cpp | 2 +- src/lib/geometry/egads/object.h | 2 +- src/lib/geometry/entity.cpp | 2 +- src/lib/geometry/entity.h | 2 +- src/lib/geometry/model.cpp | 2 +- src/lib/geometry/model.h | 2 +- src/lib/geometry/psc/facet.cpp | 2 +- src/lib/geometry/psc/facet.h | 2 +- src/lib/geometry/psc/node.cpp | 2 +- src/lib/geometry/psc/node.h | 2 +- src/lib/geometry/psc/object.cpp | 2 +- src/lib/geometry/psc/object.h | 2 +- src/lib/geometry/tessellation.cpp | 2 +- src/lib/geometry/tessellation.h | 2 +- src/lib/graphics/application.cpp | 2 +- src/lib/graphics/application.h | 2 +- src/lib/graphics/bsp.cpp | 2 +- src/lib/graphics/bsp.h | 2 +- src/lib/graphics/camera.cpp | 2 +- src/lib/graphics/camera.h | 2 +- src/lib/graphics/colormap.cpp | 2 +- src/lib/graphics/colormap.h | 2 +- src/lib/graphics/gl.cpp | 2 +- src/lib/graphics/gl.h | 2 +- src/lib/graphics/gui.cpp | 2 +- src/lib/graphics/gui.h | 2 +- src/lib/graphics/managers.h | 2 +- src/lib/graphics/math.cpp | 2 +- src/lib/graphics/math.h | 2 +- src/lib/graphics/opengl.cpp | 2 +- src/lib/graphics/plot.cpp | 2 +- src/lib/graphics/plot.h | 2 +- src/lib/graphics/postscript.cpp | 2 +- src/lib/graphics/postscript.h | 2 +- src/lib/graphics/primitives.cpp | 2 +- src/lib/graphics/primitives.h | 2 +- src/lib/graphics/raytracer.cpp | 2 +- src/lib/graphics/raytracer.h | 2 +- src/lib/graphics/shader.cpp | 2 +- src/lib/graphics/shader.h | 2 +- src/lib/graphics/shader_library.h | 2 +- src/lib/graphics/vao.cpp | 2 +- src/lib/graphics/vao.h | 2 +- src/lib/graphics/vao_polytope.cpp | 2 +- src/lib/graphics/webglpp.cpp | 2 +- src/lib/graphics/webglpp.h | 2 +- src/lib/graphics/websockets.cpp | 2 +- src/lib/graphics/window.cpp | 2 +- src/lib/graphics/window.h | 2 +- src/lib/library/ckf.cpp | 2 +- src/lib/library/ckf.h | 2 +- src/lib/library/csm.cpp | 2 +- src/lib/library/csm.h | 2 +- src/lib/library/egads.cpp | 2 +- src/lib/library/egads.h | 2 +- src/lib/library/eps.cpp | 2 +- src/lib/library/eps.h | 2 +- src/lib/library/factory.cpp | 2 +- src/lib/library/factory.h | 2 +- src/lib/library/field.cpp | 2 +- src/lib/library/field.h | 2 +- src/lib/library/library.cpp | 2 +- src/lib/library/library.h | 2 +- src/lib/library/meshb.cpp | 2 +- src/lib/library/meshb.h | 2 +- src/lib/library/metric.cpp | 2 +- src/lib/library/metric.h | 2 +- src/lib/library/obj.cpp | 2 +- src/lib/library/obj.h | 2 +- src/lib/library/plots.cpp | 2 +- src/lib/library/plots.h | 2 +- src/lib/library/samples.cpp | 2 +- src/lib/library/samples.h | 2 +- src/lib/library/spacetime.cpp | 2 +- src/lib/library/spacetime.h | 2 +- src/lib/library/tesseract.cpp | 2 +- src/lib/library/tesseract.h | 2 +- src/lib/mesh/boundary.cpp | 2 +- src/lib/mesh/boundary.h | 2 +- src/lib/mesh/builder.cpp | 2 +- src/lib/mesh/builder.h | 2 +- src/lib/mesh/builder.hpp | 2 +- src/lib/mesh/decomposition.cpp | 2 +- src/lib/mesh/decomposition.h | 2 +- src/lib/mesh/dof.cpp | 2 +- src/lib/mesh/dof.h | 2 +- src/lib/mesh/facets.cpp | 2 +- src/lib/mesh/facets.h | 2 +- src/lib/mesh/field.cpp | 2 +- src/lib/mesh/field.h | 2 +- src/lib/mesh/field.hpp | 2 +- src/lib/mesh/interpolation.cpp | 2 +- src/lib/mesh/interpolation.h | 2 +- src/lib/mesh/inverse.cpp | 2 +- src/lib/mesh/inverse.h | 2 +- src/lib/mesh/mesh.cpp | 2 +- src/lib/mesh/mesh.h | 2 +- src/lib/mesh/mpi.cpp | 2 +- src/lib/mesh/mpi_tags.h | 2 +- src/lib/mesh/neighbours.cpp | 2 +- src/lib/mesh/neighbours.h | 2 +- src/lib/mesh/partition.cpp | 2 +- src/lib/mesh/partition.h | 2 +- src/lib/mesh/points.cpp | 2 +- src/lib/mesh/points.h | 2 +- src/lib/mesh/search.cpp | 2 +- src/lib/mesh/search.h | 2 +- src/lib/mesh/topology.cpp | 2 +- src/lib/mesh/topology.h | 2 +- src/lib/mesh/topology.hpp | 2 +- src/lib/mesh/topology_polytope.cpp | 2 +- src/lib/mesh/topology_simplex.cpp | 2 +- src/lib/numerics/dual.h | 2 +- src/lib/numerics/expansion.h | 2 +- src/lib/numerics/functions.cpp | 2 +- src/lib/numerics/functions.h | 2 +- src/lib/numerics/geometry.cpp | 2 +- src/lib/numerics/geometry.h | 2 +- src/lib/numerics/integration.h | 2 +- src/lib/numerics/integration_rank.h | 2 +- src/lib/numerics/lapack.h | 2 +- src/lib/numerics/linear_algebra.cpp | 2 +- src/lib/numerics/linear_algebra.h | 2 +- src/lib/numerics/mat.cpp | 2 +- src/lib/numerics/mat.h | 2 +- src/lib/numerics/mat.hpp | 2 +- src/lib/numerics/nlopt_result.h | 2 +- src/lib/numerics/orient4d_filter.h | 2 +- src/lib/numerics/predicates.cpp | 2 +- src/lib/numerics/predicates.h | 2 +- src/lib/numerics/predicates/geo_side_exact.h | 2 +- src/lib/numerics/predicates/geo_side_filters.h | 2 +- src/lib/numerics/predicates/orient4d.cpp | 2 +- src/lib/numerics/predicates/side1_exact.cpp | 2 +- src/lib/numerics/predicates/side2_exact.cpp | 2 +- src/lib/numerics/predicates/side3_exact.cpp | 2 +- src/lib/numerics/predicates/side4_exact.cpp | 2 +- src/lib/numerics/predicates/side5_exact.cpp | 2 +- src/lib/numerics/predicates/side_exact.h | 2 +- src/lib/numerics/predicates/side_filters.h | 2 +- src/lib/numerics/predicates/side_filters_10d.cpp | 2 +- src/lib/numerics/predicates/side_filters_3d.cpp | 2 +- src/lib/numerics/predicates/side_filters_4d.cpp | 2 +- src/lib/numerics/predicates/side_filters_5d.cpp | 2 +- src/lib/numerics/predicates/side_filters_6d.cpp | 2 +- src/lib/numerics/predicates/side_filters_7d.cpp | 2 +- src/lib/numerics/predicates/side_filters_8d.cpp | 2 +- src/lib/numerics/predicates/side_filters_9d.cpp | 2 +- src/lib/numerics/predicates/side_impl.h | 2 +- src/lib/numerics/quaternion.h | 2 +- src/lib/numerics/result_of.h | 2 +- src/lib/numerics/sym.cpp | 2 +- src/lib/numerics/sym.h | 2 +- src/lib/numerics/tools.cpp | 2 +- src/lib/numerics/tools.h | 2 +- src/lib/numerics/vec.cpp | 2 +- src/lib/numerics/vec.h | 2 +- src/lib/numerics/vec.hpp | 2 +- src/lib/python/pyavro.cpp | 2 +- src/lib/voronoi/algorithms.h | 2 +- src/lib/voronoi/bowyer_watson.cpp | 2 +- src/lib/voronoi/vertex.cpp | 2 +- test/api/egg_ut.cpp | 2 +- test/api/parameters_ut.cpp | 2 +- test/lib/adaptation/adapt3d_ut.cpp | 2 +- test/lib/adaptation/adapt3ds_ut.cpp | 2 +- test/lib/adaptation/adapt4d_ut.cpp | 2 +- test/lib/adaptation/cavity_geometry_ut.cpp | 2 +- test/lib/adaptation/collapse2d_geometry_ut.cpp | 2 +- test/lib/adaptation/collapse3ds_geometry_ut.cpp | 2 +- test/lib/adaptation/collapse_ut.cpp | 2 +- test/lib/adaptation/filter_ut.cpp | 2 +- test/lib/adaptation/insertions_geometry_ut.cpp | 2 +- test/lib/adaptation/metric_ut.cpp | 2 +- test/lib/adaptation/parallel_ut.cpp | 2 +- test/lib/adaptation/parmetis_ut.cpp | 2 +- test/lib/adaptation/smoothing_geometry_ut.cpp | 2 +- test/lib/adaptation/smoothing_ut.cpp | 2 +- test/lib/adaptation/swaps_geometry_ut.cpp | 2 +- test/lib/common/containers_ut.cpp | 2 +- test/lib/common/directory_ut.cpp | 2 +- test/lib/common/nnsearch_ut.cpp | 2 +- test/lib/common/process_cpu_ut.cpp | 2 +- test/lib/common/process_mpi_ut.cpp | 2 +- test/lib/common/tools_ut.cpp | 2 +- test/lib/element/element_ut.cpp | 2 +- test/lib/element/quadrature_ut.cpp | 2 +- test/lib/element/simplex_ut.cpp | 2 +- test/lib/element/store_ut.cpp | 2 +- test/lib/geometry/body_ut.cpp | 2 +- test/lib/geometry/model_ut.cpp | 2 +- test/lib/geometry/primitive_ut.cpp | 2 +- test/lib/geometry/tessellation_ut.cpp | 2 +- test/lib/graphics/bsp_ut.cpp | 2 +- test/lib/graphics/gui_ut.cpp | 2 +- test/lib/graphics/raytracer_ut.cpp | 2 +- test/lib/graphics/vao_polytope_ut.cpp | 2 +- test/lib/graphics/vao_ut.cpp | 2 +- test/lib/graphics/webglpp_ut.cpp | 2 +- test/lib/graphics/window_ut.cpp | 2 +- test/lib/library/ckf_ut.cpp | 2 +- test/lib/library/csm_ut.cpp | 2 +- test/lib/library/egads_ut.cpp | 2 +- test/lib/library/meshb_ut.cpp | 2 +- test/lib/library/metric_ut.cpp | 2 +- test/lib/library/obj_ut.cpp | 2 +- test/lib/library/spacetime_ut.cpp | 2 +- test/lib/library/tesseract_ut.cpp | 2 +- test/lib/mesh/boundary_ut.cpp | 2 +- test/lib/mesh/builder_ut.cpp | 2 +- test/lib/mesh/curvilinear_ut.cpp | 2 +- test/lib/mesh/decomposition_ut.cpp | 2 +- test/lib/mesh/facets_ut.cpp | 2 +- test/lib/mesh/interpolation_ut.cpp | 2 +- test/lib/mesh/inverse_ut.cpp | 2 +- test/lib/mesh/mesh_ut.cpp | 2 +- test/lib/mesh/parameter_ut.cpp | 2 +- test/lib/mesh/partition_ut.cpp | 2 +- test/lib/mesh/points_ut.cpp | 2 +- test/lib/mesh/search_ut.cpp | 2 +- test/lib/mesh/topology_ut.cpp | 2 +- test/lib/numerics/functions_ut.cpp | 2 +- test/lib/numerics/integration_ut.cpp | 2 +- test/lib/numerics/linear_algebra_ut.cpp | 2 +- test/lib/numerics/predicates_ut.cpp | 2 +- test/lib/numerics/vector_ut.cpp | 2 +- test/lib/voronoi/bowyer_watson_ut.cpp | 2 +- test/sandbox/hiro/pentatope_toy.cpp | 2 +- test/sandbox/philip/adapt_toy.cpp | 2 +- test/sandbox/philip/bnot_toy.cpp | 2 +- test/sandbox/philip/conformity_toy.cpp | 2 +- test/sandbox/philip/curved_viz_toy.cpp | 2 +- test/sandbox/philip/geometry_toy.cpp | 2 +- test/sandbox/philip/high_order_viz_toy.cpp | 2 +- test/sandbox/philip/imr29_performance_toy.cpp | 2 +- test/sandbox/philip/imr29_quantization_toy.cpp | 2 +- test/sandbox/philip/imr29_sdot_toy.cpp | 2 +- test/sandbox/philip/imr29_whitenoise_toy.cpp | 2 +- test/sandbox/philip/imr30_partition_plot_toy.cpp | 2 +- test/sandbox/philip/measures.h | 2 +- test/sandbox/philip/parallel_toy.cpp | 2 +- test/sandbox/philip/plot_toy.cpp | 2 +- test/sandbox/philip/scaling_toy.cpp | 2 +- test/sandbox/philip/sdot_toy.cpp | 2 +- test/sandbox/philip/visualize.h | 2 +- test/unit_tester.hpp | 2 +- test/ut_common.cpp | 2 +- test/ut_driver.cpp | 2 +- 349 files changed, 350 insertions(+), 350 deletions(-) + ./get_submodules.sh + cd build + git archive --remote=ssh://acdl.mit.edu/master/home/svnroot/SANSproto develop:scripts/jenkins -- jenkins_env.sh + tar -O -xf - + source jenkins_env.sh ++ shopt -s nocasematch +++ pwd ++ dir=/home/jenkins/util/avro/build +++ basename /home/jenkins/util/avro/build ++ builddir=build ++ export AFLR_VERSION=10.17.5 ++ AFLR_VERSION=10.17.5 +++ hostname ++ [[ reynolds == *\r\e\y\n\o\l\d\s* ]] ++ [[ build == *\i\n\t\e\l* ]] ++ [[ build == *\c\o\v\e\r\a\g\e* ]] ++ export PATH=/usr/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin ++ PATH=/usr/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin ++ export LD_LIBRARY_PATH=/usr/lib: ++ LD_LIBRARY_PATH=/usr/lib: ++ export LAPACK_DIR=/home/jenkins/util/lapack/lapack-3.6.1/install ++ LAPACK_DIR=/home/jenkins/util/lapack/lapack-3.6.1/install ++ export ESP_DIR=/home/jenkins/util/ESP/EngSketchPad ++ ESP_DIR=/home/jenkins/util/ESP/EngSketchPad ++ export CAS_DIR=/home/jenkins/util/ESP/OpenCASCADE-7.4.1 ++ CAS_DIR=/home/jenkins/util/ESP/OpenCASCADE-7.4.1 ++ export AFLR_DIR=/home/jenkins/util/AFLR/aflr_lib_10.17.5 ++ AFLR_DIR=/home/jenkins/util/AFLR/aflr_lib_10.17.5 +++ ls -d /home/jenkins/util/PETSc/petsc/install_dir ++ export PETSC_DIR=/home/jenkins/util/PETSc/petsc/install_dir ++ PETSC_DIR=/home/jenkins/util/PETSc/petsc/install_dir ++ export PARMETIS_DIR=/home/jenkins/util/parmetis/parmetis-4.0.3/install ++ PARMETIS_DIR=/home/jenkins/util/parmetis/parmetis-4.0.3/install ++ export METIS_DIR=/home/jenkins/util/parmetis/metis-5.1.0/install ++ METIS_DIR=/home/jenkins/util/parmetis/metis-5.1.0/install ++ export REFINE_DIR=/home/jenkins/util/refine/build_parallel/install ++ REFINE_DIR=/home/jenkins/util/refine/build_parallel/install ++ export AVRO_DIR=/home/jenkins/util/avro ++ AVRO_DIR=/home/jenkins/util/avro ++ '[' -d /home/jenkins/util/NLOPT ']' ++ export PATH=/home/jenkins/util/vera/vera/install/bin:/usr/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin ++ PATH=/home/jenkins/util/vera/vera/install/bin:/usr/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin ++ export PATH=/home/jenkins/util/cppcheck/cppcheck-1.79/:/home/jenkins/util/vera/vera/install/bin:/usr/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin ++ PATH=/home/jenkins/util/cppcheck/cppcheck-1.79/:/home/jenkins/util/vera/vera/install/bin:/usr/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin +++ ls -d /home/jenkins/util/ccache/ccache-4.4/install/bin ++ export PATH=/home/jenkins/util/ccache/ccache-4.4/install/bin:/home/jenkins/util/cppcheck/cppcheck-1.79/:/home/jenkins/util/vera/vera/install/bin:/usr/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin ++ PATH=/home/jenkins/util/ccache/ccache-4.4/install/bin:/home/jenkins/util/cppcheck/cppcheck-1.79/:/home/jenkins/util/vera/vera/install/bin:/usr/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin ++ export PATH=/home/jenkins/util/valgrind/valgrind-3.17.0/install/bin:/home/jenkins/util/ccache/ccache-4.4/install/bin:/home/jenkins/util/cppcheck/cppcheck-1.79/:/home/jenkins/util/vera/vera/install/bin:/usr/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin ++ PATH=/home/jenkins/util/valgrind/valgrind-3.17.0/install/bin:/home/jenkins/util/ccache/ccache-4.4/install/bin:/home/jenkins/util/cppcheck/cppcheck-1.79/:/home/jenkins/util/vera/vera/install/bin:/usr/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin ++ export PATH=/home/jenkins/util/fefloa/bin:/home/jenkins/util/valgrind/valgrind-3.17.0/install/bin:/home/jenkins/util/ccache/ccache-4.4/install/bin:/home/jenkins/util/cppcheck/cppcheck-1.79/:/home/jenkins/util/vera/vera/install/bin:/usr/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin ++ PATH=/home/jenkins/util/fefloa/bin:/home/jenkins/util/valgrind/valgrind-3.17.0/install/bin:/home/jenkins/util/ccache/ccache-4.4/install/bin:/home/jenkins/util/cppcheck/cppcheck-1.79/:/home/jenkins/util/vera/vera/install/bin:/usr/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin ++ [[ build == *\i\n\t\e\l* ]] +++ hostname ++ [[ reynolds == *\c\e\n\t\O\S\7* ]] +++ hostname ++ [[ reynolds == *\r\h\e\l* ]] ++ export Boost_NO_SYSTEM_PATHS=OFF ++ Boost_NO_SYSTEM_PATHS=OFF ++ env + make avro_lib make -C debug_gnu9 --no-print-directory avro_lib -- Build type = debug -- lapack not found -- only supporting WebViewer -- Setting gnu compiler flags -- CPU thread manager = c++11. -- GPU threading not enabled. GPU thread manager = serial. -- Please install kcachegrind for graphical profiling. -- Please install massif-visualizer for graphical heap memory usage. -- pybind11 v2.10.0 dev1 -- Configuring done -- Generating done -- Build files have been written to: /home/jenkins/util/avro/build/debug_gnu9 Consolidate compiler generated dependencies of target avro_src [ 0%] Building CXX object src/CMakeFiles/avro_src.dir/include/avro.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/include/avro_params.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/adapt.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/cavity.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/collapses.cpp.o [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/filter.cpp.o /home/jenkins/util/avro/src/lib/adaptation/filter.cpp: In member function ‘void avro::Filter::generateCandidates(avro::Topology&, avro::MetricField&, avro::real_t, avro::Insert&)’: /home/jenkins/util/avro/src/lib/adaptation/filter.cpp:139:11: warning: variable ‘TIME0’ set but not used [-Wunused-but-set-variable] 139 | clock_t TIME0, TIME1; | ^~~~~ /home/jenkins/util/avro/src/lib/adaptation/filter.cpp:139:18: warning: variable ‘TIME1’ set but not used [-Wunused-but-set-variable] 139 | clock_t TIME0, TIME1; | ^~~~~ [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/geometry.cpp.o [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/implied_metric.cpp.o /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp: In instantiation of ‘void avro::ElementImpliedMetric::compute(const std::vector&) [with type = avro::Simplex]’: /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:638:16: required from here /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:96:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 96 | J_ = J0_*Jeq_; | ~~~^~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:99:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 99 | M_ = numerics::inverse( JJt ); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp: In instantiation of ‘void avro::ElementImpliedMetric::compute(const avro::Points&, const index_t*, avro::index_t) [with type = avro::Simplex; avro::index_t = long unsigned int]’: /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:638:16: required from here /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:110:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 110 | J_ = J0_*Jeq_; | ~~~^~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:113:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 113 | M_ = numerics::inverse( JJt ); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp: In instantiation of ‘void avro::ElementImpliedMetric::inverse(const avro::Points&, const index_t*, avro::index_t) [with type = avro::Simplex; avro::index_t = long unsigned int]’: /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:638:16: required from here /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:125:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 125 | J_ = J0_*Jeq_; | ~~~^~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:126:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 126 | M_ = J_*numerics::transpose(J_); // no inverse | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/insertions.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/metric.cpp.o /home/jenkins/util/avro/src/lib/adaptation/metric.cpp: In instantiation of ‘avro::real_t avro::MetricField::length(avro::index_t, avro::index_t) const [with type = avro::Simplex; avro::real_t = double; avro::index_t = long unsigned int]’: /home/jenkins/util/avro/src/lib/adaptation/metric.cpp:708:16: required from here /home/jenkins/util/avro/src/lib/adaptation/metric.cpp:146:10: warning: variable ‘dim’ set but not used [-Wunused-but-set-variable] 146 | coord_t dim = topology_.points().dim(); | ^~~ [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/parallel.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/primitive.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/properties.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/smoothing.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/swaps.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/crypto.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/error.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/kdtree.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/nearest_neighbours.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/process_cpu.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/process_gpu.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/process_mpi.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/tools.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/basis.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_line.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_pentatope.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_tetrahedron.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_triangle.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/element.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_line.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_nodes.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_pentatope.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_tetrahedron.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_triangle.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_line.cpp.o /home/jenkins/util/avro/src/lib/element/legendre_line.cpp: In static member function ‘static void avro::Legendre::eval(const double*, double*) [with int N = 1; int P = 0]’: /home/jenkins/util/avro/src/lib/element/legendre_line.cpp:24:10: warning: unused variable ‘s’ [-Wunused-variable] 24 | real_t s = x[0]; | ^ [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_pentatope.cpp.o [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_tetrahedron.cpp.o [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_triangle.cpp.o [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/polytope.cpp.o [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/quadrature.cpp.o /home/jenkins/util/avro/src/lib/element/quadrature.cpp: In instantiation of ‘void avro::QuadratureStore::build() [with type = avro::Simplex]’: /home/jenkins/util/avro/src/lib/element/quadrature.cpp:34:3: required from ‘avro::QuadratureStore::QuadratureStore(avro::BasisFunctionCategory) [with type = avro::Simplex]’ /home/jenkins/util/avro/src/lib/element/quadrature.cpp:22:83: required from here /home/jenkins/util/avro/src/lib/element/quadrature.cpp:89:16: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 89 | B[d] = matd( nb_basis , quad.nb() ); In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/quadrature.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/element/quadrature.cpp:110:16: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 110 | B[d] = Ainv*B[d]; // convert modal basis to nodal basis In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/quadrature.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/reference.cpp.o [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/simplex.cpp.o /home/jenkins/util/avro/src/lib/element/simplex.cpp: In member function ‘void avro::Simplex::precalculate()’: /home/jenkins/util/avro/src/lib/element/simplex.cpp:127:25: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 127 | for (index_t k = 0; k < number_+1; k++) | ~~^~~~~~~~~~~ [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/trace2cell.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/body.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/entity.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/model.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/tessellation.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/body.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/context.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/data.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/model.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/object.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/psc/facet.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/psc/node.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/psc/object.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/application.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/bsp.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/camera.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/colormap.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/gl.cpp.o [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/gui.cpp.o /home/jenkins/util/avro/src/lib/graphics/gui.cpp:71:1: warning: ‘std::vector avro::graphics::convert_to_char(const std::vector >&)’ defined but not used [-Wunused-function] 71 | convert_to_char( const std::vector& s ) { | ^~~~~~~~~~~~~~~ [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/math.cpp.o [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/opengl.cpp.o /home/jenkins/util/avro/src/lib/graphics/opengl.cpp: In member function ‘void avro::graphics::Window::select_colormap(const string&)’: /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:475:11: warning: unused variable ‘ncolor’ [-Wunused-variable] 475 | index_t ncolor = 256*3; | ^~~~~~ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp: In member function ‘void avro::graphics::ClipPlane::write()’: /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:418:28: warning: ‘buffers[0]’ is used uninitialized in this function [-Wuninitialized] 418 | point_buffer_ = buffers[0]; | ~~~~~~~~~^ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:419:28: warning: ‘buffers[1]’ is used uninitialized in this function [-Wuninitialized] 419 | index_buffer_ = buffers[1]; | ~~~~~~~~~^ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp: In member function ‘void avro::graphics::Window::select_colormap(const string&)’: /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:486:25: warning: ‘colormap_texture’ may be used uninitialized in this function [-Wmaybe-uninitialized] 486 | manager_.track_texture(colormap_texture); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:487:24: warning: ‘colormap_buffer’ may be used uninitialized in this function [-Wmaybe-uninitialized] 487 | manager_.track_buffer(colormap_buffer); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/plot.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/postscript.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/primitives.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/raytracer.cpp.o /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp: In member function ‘void avro::graphics::Canvas::convert()’: /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp:97:25: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 97 | for (index_t i = 0; i < height_; i++) | ~~^~~~~~~~~ /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp:98:25: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 98 | for (index_t j = 0; j < width_; j++) | ~~^~~~~~~~ /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp: In member function ‘void avro::graphics::RayTracer::render()’: /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp:435:27: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 435 | for (index_t j = 0; j < canvas_.width(); j++) { | ~~^~~~~~~~~~~~~~~~~ [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/shader.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/vao.cpp.o [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/vao_polytope.cpp.o /home/jenkins/util/avro/src/lib/graphics/vao_polytope.cpp: In member function ‘void avro::graphics::PolytopeDecomposition::triangulate()’: /home/jenkins/util/avro/src/lib/graphics/vao_polytope.cpp:136:11: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 136 | for (index_t j = 0; j < coordinates_.size()/3; j++) | ^~~ /home/jenkins/util/avro/src/lib/graphics/vao_polytope.cpp:139:13: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 139 | for (index_t j = 0; j < output.numberofpoints; j++) | ^~~ /home/jenkins/util/avro/src/lib/graphics/vao_polytope.cpp:139:35: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 139 | for (index_t j = 0; j < output.numberofpoints; j++) | ~~^~~~~~~~~~~~~~~~~~~~~~~ [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/webglpp.cpp.o [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/websockets.cpp.o [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/window.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/ckf.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/csm.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/egads.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/eps.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/factory.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/field.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/library.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/meshb.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/metric.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/obj.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/plots.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/samples.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/spacetime.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/tesseract.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/boundary.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/builder.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/decomposition.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/dof.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/facets.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/field.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/interpolation.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/inverse.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/mesh.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/mpi.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/neighbours.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/partition.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/points.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/search.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/topology.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/topology_polytope.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/topology_simplex.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/functions.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/geometry.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/linear_algebra.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/mat.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/sym.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/tools.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/vec.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/orient4d.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side1_exact.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side2_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side3_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side4_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side5_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_10d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_3d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_4d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_5d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_6d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_7d.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_8d.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_9d.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/bowyer_watson.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/cell.cpp.o [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/cell_nd.cpp.o [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/diagram.cpp.o /home/jenkins/util/avro/src/lib/voronoi/diagram.cpp: In member function ‘void avro::voronoi::PowerDiagram::add_cell(const avro::voronoi::Cell&, bool)’: /home/jenkins/util/avro/src/lib/voronoi/diagram.cpp:187:7: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 187 | for (index_t i = 0; i < polytope.size(); i++) | ^~~ /home/jenkins/util/avro/src/lib/voronoi/diagram.cpp:189:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 189 | add( polytope.data() , polytope.size() ); | ^~~ [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/facets.cpp.o [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/optimal_transport.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/particles.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/vertex.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/bin/adapt.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/bin/animate.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/arguments.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/check.cpp.o /home/jenkins/util/avro/src/bin/check.cpp: In function ‘int avro::programs::check(int, const char**)’: /home/jenkins/util/avro/src/bin/check.cpp:66:19: warning: unused variable ‘topology’ [-Wunused-variable] 66 | Topology& topology = *static_cast*>(ptopology.get()); | ^~~~~~~~ [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/conformity.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/conformityp.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/convert.cpp.o [ 94%] Building CXX object src/CMakeFiles/avro_src.dir/bin/image.cpp.o [ 94%] Building CXX object src/CMakeFiles/avro_src.dir/bin/plot.cpp.o [ 94%] Built target avro_src Consolidate compiler generated dependencies of target avro_third_party [ 94%] Building CXX object src/third_party/CMakeFiles/avro_third_party.dir/geogram/kd_tree.cpp.o [ 94%] Building CXX object src/third_party/CMakeFiles/avro_third_party.dir/geogram/nn_search.cpp.o [100%] Built target avro_third_party [100%] Linking CXX static library ../lib/libavro.a [100%] Built target avro_static [100%] Linking CXX shared library ../lib/libavro.so [100%] Built target avro_shared [100%] Built target avro_lib make -C debug_gnu10 --no-print-directory avro_lib -- Build type = debug -- lapack not found -- only supporting WebViewer -- Setting gnu compiler flags -- CPU thread manager = c++11. -- GPU threading not enabled. GPU thread manager = serial. -- Please install kcachegrind for graphical profiling. -- Please install massif-visualizer for graphical heap memory usage. -- pybind11 v2.10.0 dev1 -- Configuring done -- Generating done -- Build files have been written to: /home/jenkins/util/avro/build/debug_gnu10 Consolidate compiler generated dependencies of target avro_src [ 0%] Building CXX object src/CMakeFiles/avro_src.dir/include/avro.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/include/avro_params.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/adapt.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/cavity.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/collapses.cpp.o [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/filter.cpp.o /home/jenkins/util/avro/src/lib/adaptation/filter.cpp: In member function ‘void avro::Filter::generateCandidates(avro::Topology&, avro::MetricField&, avro::real_t, avro::Insert&)’: /home/jenkins/util/avro/src/lib/adaptation/filter.cpp:139:11: warning: variable ‘TIME0’ set but not used [-Wunused-but-set-variable] 139 | clock_t TIME0, TIME1; | ^~~~~ /home/jenkins/util/avro/src/lib/adaptation/filter.cpp:139:18: warning: variable ‘TIME1’ set but not used [-Wunused-but-set-variable] 139 | clock_t TIME0, TIME1; | ^~~~~ [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/geometry.cpp.o [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/implied_metric.cpp.o /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp: In instantiation of ‘void avro::ElementImpliedMetric::compute(const std::vector&) [with type = avro::Simplex]’: /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:638:16: required from here /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:96:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 96 | J_ = J0_*Jeq_; | ~~~^~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:99:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 99 | M_ = numerics::inverse( JJt ); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp: In instantiation of ‘void avro::ElementImpliedMetric::compute(const avro::Points&, const index_t*, avro::index_t) [with type = avro::Simplex; avro::index_t = long unsigned int]’: /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:638:16: required from here /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:110:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 110 | J_ = J0_*Jeq_; | ~~~^~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:113:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 113 | M_ = numerics::inverse( JJt ); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp: In instantiation of ‘void avro::ElementImpliedMetric::inverse(const avro::Points&, const index_t*, avro::index_t) [with type = avro::Simplex; avro::index_t = long unsigned int]’: /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:638:16: required from here /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:125:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 125 | J_ = J0_*Jeq_; | ~~~^~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:126:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 126 | M_ = J_*numerics::transpose(J_); // no inverse | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/insertions.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/metric.cpp.o /home/jenkins/util/avro/src/lib/adaptation/metric.cpp: In instantiation of ‘avro::real_t avro::MetricField::length(avro::index_t, avro::index_t) const [with type = avro::Simplex; avro::real_t = double; avro::index_t = long unsigned int]’: /home/jenkins/util/avro/src/lib/adaptation/metric.cpp:708:16: required from here /home/jenkins/util/avro/src/lib/adaptation/metric.cpp:146:10: warning: variable ‘dim’ set but not used [-Wunused-but-set-variable] 146 | coord_t dim = topology_.points().dim(); | ^~~ [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/parallel.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/primitive.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/properties.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/smoothing.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/swaps.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/crypto.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/error.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/kdtree.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/nearest_neighbours.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/process_cpu.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/process_gpu.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/process_mpi.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/tools.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/basis.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_line.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_pentatope.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_tetrahedron.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_triangle.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/element.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_line.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_nodes.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_pentatope.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_tetrahedron.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_triangle.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_line.cpp.o /home/jenkins/util/avro/src/lib/element/legendre_line.cpp: In static member function ‘static void avro::Legendre::eval(const double*, double*) [with int N = 1; int P = 0]’: /home/jenkins/util/avro/src/lib/element/legendre_line.cpp:24:10: warning: unused variable ‘s’ [-Wunused-variable] 24 | real_t s = x[0]; | ^ [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_pentatope.cpp.o [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_tetrahedron.cpp.o [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_triangle.cpp.o [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/polytope.cpp.o [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/quadrature.cpp.o /home/jenkins/util/avro/src/lib/element/quadrature.cpp: In instantiation of ‘void avro::QuadratureStore::build() [with type = avro::Simplex]’: /home/jenkins/util/avro/src/lib/element/quadrature.cpp:34:3: required from ‘avro::QuadratureStore::QuadratureStore(avro::BasisFunctionCategory) [with type = avro::Simplex]’ /home/jenkins/util/avro/src/lib/element/quadrature.cpp:22:83: required from here /home/jenkins/util/avro/src/lib/element/quadrature.cpp:89:16: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 89 | B[d] = matd( nb_basis , quad.nb() ); In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/quadrature.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/element/quadrature.cpp:110:16: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 110 | B[d] = Ainv*B[d]; // convert modal basis to nodal basis In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/quadrature.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/reference.cpp.o [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/simplex.cpp.o /home/jenkins/util/avro/src/lib/element/simplex.cpp: In member function ‘void avro::Simplex::precalculate()’: /home/jenkins/util/avro/src/lib/element/simplex.cpp:127:25: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 127 | for (index_t k = 0; k < number_+1; k++) | ~~^~~~~~~~~~~ [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/trace2cell.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/body.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/entity.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/model.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/tessellation.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/body.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/context.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/data.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/model.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/object.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/psc/facet.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/psc/node.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/psc/object.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/application.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/bsp.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/camera.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/colormap.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/gl.cpp.o [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/gui.cpp.o /home/jenkins/util/avro/src/lib/graphics/gui.cpp:71:1: warning: ‘std::vector avro::graphics::convert_to_char(const std::vector >&)’ defined but not used [-Wunused-function] 71 | convert_to_char( const std::vector& s ) { | ^~~~~~~~~~~~~~~ [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/math.cpp.o [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/opengl.cpp.o /home/jenkins/util/avro/src/lib/graphics/opengl.cpp: In member function ‘void avro::graphics::Window::select_colormap(const string&)’: /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:475:11: warning: unused variable ‘ncolor’ [-Wunused-variable] 475 | index_t ncolor = 256*3; | ^~~~~~ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp: In member function ‘void avro::graphics::ClipPlane::write()’: /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:418:28: warning: ‘buffers[0]’ is used uninitialized in this function [-Wuninitialized] 418 | point_buffer_ = buffers[0]; | ~~~~~~~~~^ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:419:28: warning: ‘buffers[1]’ is used uninitialized in this function [-Wuninitialized] 419 | index_buffer_ = buffers[1]; | ~~~~~~~~~^ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp: In member function ‘void avro::graphics::Window::select_colormap(const string&)’: /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:486:25: warning: ‘colormap_texture’ may be used uninitialized in this function [-Wmaybe-uninitialized] 486 | manager_.track_texture(colormap_texture); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:487:24: warning: ‘colormap_buffer’ may be used uninitialized in this function [-Wmaybe-uninitialized] 487 | manager_.track_buffer(colormap_buffer); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/plot.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/postscript.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/primitives.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/raytracer.cpp.o /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp: In member function ‘void avro::graphics::Canvas::convert()’: /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp:97:25: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 97 | for (index_t i = 0; i < height_; i++) | ~~^~~~~~~~~ /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp:98:25: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 98 | for (index_t j = 0; j < width_; j++) | ~~^~~~~~~~ /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp: In member function ‘void avro::graphics::RayTracer::render()’: /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp:435:27: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 435 | for (index_t j = 0; j < canvas_.width(); j++) { | ~~^~~~~~~~~~~~~~~~~ [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/shader.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/vao.cpp.o [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/vao_polytope.cpp.o /home/jenkins/util/avro/src/lib/graphics/vao_polytope.cpp: In member function ‘void avro::graphics::PolytopeDecomposition::triangulate()’: /home/jenkins/util/avro/src/lib/graphics/vao_polytope.cpp:136:11: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 136 | for (index_t j = 0; j < coordinates_.size()/3; j++) | ^~~ /home/jenkins/util/avro/src/lib/graphics/vao_polytope.cpp:139:13: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 139 | for (index_t j = 0; j < output.numberofpoints; j++) | ^~~ /home/jenkins/util/avro/src/lib/graphics/vao_polytope.cpp:139:35: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 139 | for (index_t j = 0; j < output.numberofpoints; j++) | ~~^~~~~~~~~~~~~~~~~~~~~~~ [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/webglpp.cpp.o [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/websockets.cpp.o [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/window.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/ckf.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/csm.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/egads.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/eps.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/factory.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/field.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/library.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/meshb.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/metric.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/obj.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/plots.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/samples.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/spacetime.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/tesseract.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/boundary.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/builder.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/decomposition.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/dof.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/facets.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/field.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/interpolation.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/inverse.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/mesh.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/mpi.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/neighbours.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/partition.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/points.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/search.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/topology.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/topology_polytope.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/topology_simplex.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/functions.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/geometry.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/linear_algebra.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/mat.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/sym.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/tools.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/vec.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/orient4d.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side1_exact.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side2_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side3_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side4_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side5_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_10d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_3d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_4d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_5d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_6d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_7d.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_8d.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_9d.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/bowyer_watson.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/cell.cpp.o [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/cell_nd.cpp.o [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/diagram.cpp.o /home/jenkins/util/avro/src/lib/voronoi/diagram.cpp: In member function ‘void avro::voronoi::PowerDiagram::add_cell(const avro::voronoi::Cell&, bool)’: /home/jenkins/util/avro/src/lib/voronoi/diagram.cpp:187:7: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 187 | for (index_t i = 0; i < polytope.size(); i++) | ^~~ /home/jenkins/util/avro/src/lib/voronoi/diagram.cpp:189:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 189 | add( polytope.data() , polytope.size() ); | ^~~ [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/facets.cpp.o [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/optimal_transport.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/particles.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/vertex.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/bin/adapt.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/bin/animate.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/arguments.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/check.cpp.o /home/jenkins/util/avro/src/bin/check.cpp: In function ‘int avro::programs::check(int, const char**)’: /home/jenkins/util/avro/src/bin/check.cpp:66:19: warning: unused variable ‘topology’ [-Wunused-variable] 66 | Topology& topology = *static_cast*>(ptopology.get()); | ^~~~~~~~ [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/conformity.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/conformityp.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/convert.cpp.o [ 94%] Building CXX object src/CMakeFiles/avro_src.dir/bin/image.cpp.o [ 94%] Building CXX object src/CMakeFiles/avro_src.dir/bin/plot.cpp.o [ 94%] Built target avro_src Consolidate compiler generated dependencies of target avro_third_party [ 94%] Building CXX object src/third_party/CMakeFiles/avro_third_party.dir/geogram/kd_tree.cpp.o [ 94%] Building CXX object src/third_party/CMakeFiles/avro_third_party.dir/geogram/nn_search.cpp.o [100%] Built target avro_third_party [100%] Linking CXX static library ../lib/libavro.a [100%] Built target avro_static [100%] Linking CXX shared library ../lib/libavro.so [100%] Built target avro_shared [100%] Built target avro_lib make -C debug_gnu11 --no-print-directory avro_lib -- Build type = debug -- lapack not found -- only supporting WebViewer -- Setting gnu compiler flags -- CPU thread manager = c++11. -- GPU threading not enabled. GPU thread manager = serial. -- Please install kcachegrind for graphical profiling. -- Please install massif-visualizer for graphical heap memory usage. -- pybind11 v2.10.0 dev1 -- Configuring done -- Generating done -- Build files have been written to: /home/jenkins/util/avro/build/debug_gnu11 Consolidate compiler generated dependencies of target avro_src [ 0%] Building CXX object src/CMakeFiles/avro_src.dir/include/avro.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/include/avro_params.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/adapt.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/cavity.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/collapses.cpp.o [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/filter.cpp.o /home/jenkins/util/avro/src/lib/adaptation/filter.cpp: In member function ‘void avro::Filter::generateCandidates(avro::Topology&, avro::MetricField&, avro::real_t, avro::Insert&)’: /home/jenkins/util/avro/src/lib/adaptation/filter.cpp:139:11: warning: variable ‘TIME0’ set but not used [-Wunused-but-set-variable] 139 | clock_t TIME0, TIME1; | ^~~~~ /home/jenkins/util/avro/src/lib/adaptation/filter.cpp:139:18: warning: variable ‘TIME1’ set but not used [-Wunused-but-set-variable] 139 | clock_t TIME0, TIME1; | ^~~~~ [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/geometry.cpp.o [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/implied_metric.cpp.o /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp: In instantiation of ‘void avro::ElementImpliedMetric::compute(const std::vector&) [with type = avro::Simplex]’: /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:638:16: required from here /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:96:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 96 | J_ = J0_*Jeq_; | ~~~^~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:99:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 99 | M_ = numerics::inverse( JJt ); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp: In instantiation of ‘void avro::ElementImpliedMetric::compute(const avro::Points&, const index_t*, avro::index_t) [with type = avro::Simplex; avro::index_t = long unsigned int]’: /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:638:16: required from here /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:110:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 110 | J_ = J0_*Jeq_; | ~~~^~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:113:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 113 | M_ = numerics::inverse( JJt ); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp: In instantiation of ‘void avro::ElementImpliedMetric::inverse(const avro::Points&, const index_t*, avro::index_t) [with type = avro::Simplex; avro::index_t = long unsigned int]’: /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:638:16: required from here /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:125:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 125 | J_ = J0_*Jeq_; | ~~~^~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:126:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 126 | M_ = J_*numerics::transpose(J_); // no inverse | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/insertions.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/metric.cpp.o /home/jenkins/util/avro/src/lib/adaptation/metric.cpp: In instantiation of ‘avro::real_t avro::MetricField::length(avro::index_t, avro::index_t) const [with type = avro::Simplex; avro::real_t = double; avro::index_t = long unsigned int]’: /home/jenkins/util/avro/src/lib/adaptation/metric.cpp:708:16: required from here /home/jenkins/util/avro/src/lib/adaptation/metric.cpp:146:10: warning: variable ‘dim’ set but not used [-Wunused-but-set-variable] 146 | coord_t dim = topology_.points().dim(); | ^~~ [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/parallel.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/primitive.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/properties.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/smoothing.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/swaps.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/crypto.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/error.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/kdtree.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/nearest_neighbours.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/process_cpu.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/process_gpu.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/process_mpi.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/tools.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/basis.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_line.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_pentatope.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_tetrahedron.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_triangle.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/element.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_line.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_nodes.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_pentatope.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_tetrahedron.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_triangle.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_line.cpp.o /home/jenkins/util/avro/src/lib/element/legendre_line.cpp: In static member function ‘static void avro::Legendre::eval(const double*, double*) [with int N = 1; int P = 0]’: /home/jenkins/util/avro/src/lib/element/legendre_line.cpp:24:10: warning: unused variable ‘s’ [-Wunused-variable] 24 | real_t s = x[0]; | ^ [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_pentatope.cpp.o [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_tetrahedron.cpp.o [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_triangle.cpp.o [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/polytope.cpp.o [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/quadrature.cpp.o /home/jenkins/util/avro/src/lib/element/quadrature.cpp: In instantiation of ‘void avro::QuadratureStore::build() [with type = avro::Simplex]’: /home/jenkins/util/avro/src/lib/element/quadrature.cpp:34:3: required from ‘avro::QuadratureStore::QuadratureStore(avro::BasisFunctionCategory) [with type = avro::Simplex]’ /home/jenkins/util/avro/src/lib/element/quadrature.cpp:22:83: required from here /home/jenkins/util/avro/src/lib/element/quadrature.cpp:89:16: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 89 | B[d] = matd( nb_basis , quad.nb() ); In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/quadrature.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/element/quadrature.cpp:110:16: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 110 | B[d] = Ainv*B[d]; // convert modal basis to nodal basis In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/quadrature.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/reference.cpp.o [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/simplex.cpp.o /home/jenkins/util/avro/src/lib/element/simplex.cpp: In member function ‘void avro::Simplex::precalculate()’: /home/jenkins/util/avro/src/lib/element/simplex.cpp:127:25: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 127 | for (index_t k = 0; k < number_+1; k++) | ~~^~~~~~~~~~~ [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/trace2cell.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/body.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/entity.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/model.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/tessellation.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/body.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/context.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/data.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/model.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/object.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/psc/facet.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/psc/node.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/psc/object.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/application.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/bsp.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/camera.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/colormap.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/gl.cpp.o [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/gui.cpp.o /home/jenkins/util/avro/src/lib/graphics/gui.cpp:71:1: warning: ‘std::vector avro::graphics::convert_to_char(const std::vector >&)’ defined but not used [-Wunused-function] 71 | convert_to_char( const std::vector& s ) { | ^~~~~~~~~~~~~~~ [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/math.cpp.o [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/opengl.cpp.o /home/jenkins/util/avro/src/lib/graphics/opengl.cpp: In member function ‘void avro::graphics::Window::select_colormap(const string&)’: /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:475:11: warning: unused variable ‘ncolor’ [-Wunused-variable] 475 | index_t ncolor = 256*3; | ^~~~~~ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp: In member function ‘void avro::graphics::ClipPlane::write()’: /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:418:28: warning: ‘buffers[0]’ is used uninitialized in this function [-Wuninitialized] 418 | point_buffer_ = buffers[0]; | ~~~~~~~~~^ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:419:28: warning: ‘buffers[1]’ is used uninitialized in this function [-Wuninitialized] 419 | index_buffer_ = buffers[1]; | ~~~~~~~~~^ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp: In member function ‘void avro::graphics::Window::select_colormap(const string&)’: /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:486:25: warning: ‘colormap_texture’ may be used uninitialized in this function [-Wmaybe-uninitialized] 486 | manager_.track_texture(colormap_texture); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:487:24: warning: ‘colormap_buffer’ may be used uninitialized in this function [-Wmaybe-uninitialized] 487 | manager_.track_buffer(colormap_buffer); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/plot.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/postscript.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/primitives.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/raytracer.cpp.o /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp: In member function ‘void avro::graphics::Canvas::convert()’: /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp:97:25: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 97 | for (index_t i = 0; i < height_; i++) | ~~^~~~~~~~~ /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp:98:25: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 98 | for (index_t j = 0; j < width_; j++) | ~~^~~~~~~~ /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp: In member function ‘void avro::graphics::RayTracer::render()’: /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp:435:27: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 435 | for (index_t j = 0; j < canvas_.width(); j++) { | ~~^~~~~~~~~~~~~~~~~ [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/shader.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/vao.cpp.o [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/vao_polytope.cpp.o /home/jenkins/util/avro/src/lib/graphics/vao_polytope.cpp: In member function ‘void avro::graphics::PolytopeDecomposition::triangulate()’: /home/jenkins/util/avro/src/lib/graphics/vao_polytope.cpp:136:11: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 136 | for (index_t j = 0; j < coordinates_.size()/3; j++) | ^~~ /home/jenkins/util/avro/src/lib/graphics/vao_polytope.cpp:139:13: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 139 | for (index_t j = 0; j < output.numberofpoints; j++) | ^~~ /home/jenkins/util/avro/src/lib/graphics/vao_polytope.cpp:139:35: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 139 | for (index_t j = 0; j < output.numberofpoints; j++) | ~~^~~~~~~~~~~~~~~~~~~~~~~ [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/webglpp.cpp.o [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/websockets.cpp.o [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/window.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/ckf.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/csm.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/egads.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/eps.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/factory.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/field.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/library.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/meshb.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/metric.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/obj.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/plots.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/samples.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/spacetime.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/tesseract.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/boundary.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/builder.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/decomposition.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/dof.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/facets.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/field.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/interpolation.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/inverse.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/mesh.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/mpi.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/neighbours.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/partition.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/points.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/search.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/topology.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/topology_polytope.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/topology_simplex.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/functions.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/geometry.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/linear_algebra.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/mat.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/sym.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/tools.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/vec.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/orient4d.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side1_exact.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side2_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side3_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side4_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side5_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_10d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_3d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_4d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_5d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_6d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_7d.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_8d.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_9d.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/bowyer_watson.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/cell.cpp.o [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/cell_nd.cpp.o [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/diagram.cpp.o /home/jenkins/util/avro/src/lib/voronoi/diagram.cpp: In member function ‘void avro::voronoi::PowerDiagram::add_cell(const avro::voronoi::Cell&, bool)’: /home/jenkins/util/avro/src/lib/voronoi/diagram.cpp:187:7: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 187 | for (index_t i = 0; i < polytope.size(); i++) | ^~~ /home/jenkins/util/avro/src/lib/voronoi/diagram.cpp:189:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 189 | add( polytope.data() , polytope.size() ); | ^~~ [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/facets.cpp.o [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/optimal_transport.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/particles.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/vertex.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/bin/adapt.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/bin/animate.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/arguments.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/check.cpp.o /home/jenkins/util/avro/src/bin/check.cpp: In function ‘int avro::programs::check(int, const char**)’: /home/jenkins/util/avro/src/bin/check.cpp:66:19: warning: unused variable ‘topology’ [-Wunused-variable] 66 | Topology& topology = *static_cast*>(ptopology.get()); | ^~~~~~~~ [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/conformity.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/conformityp.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/convert.cpp.o [ 94%] Building CXX object src/CMakeFiles/avro_src.dir/bin/image.cpp.o [ 94%] Building CXX object src/CMakeFiles/avro_src.dir/bin/plot.cpp.o [ 94%] Built target avro_src Consolidate compiler generated dependencies of target avro_third_party [ 94%] Building CXX object src/third_party/CMakeFiles/avro_third_party.dir/geogram/kd_tree.cpp.o [ 94%] Building CXX object src/third_party/CMakeFiles/avro_third_party.dir/geogram/nn_search.cpp.o [100%] Built target avro_third_party [100%] Linking CXX static library ../lib/libavro.a [100%] Built target avro_static [100%] Linking CXX shared library ../lib/libavro.so [100%] Built target avro_shared [100%] Built target avro_lib make -C debug_clang --no-print-directory avro_lib -- Build type = debug -- lapack not found -- only supporting WebViewer -- Setting clang compiler flags -- CPU thread manager = c++11. -- GPU threading not enabled. GPU thread manager = serial. -- Please install kcachegrind for graphical profiling. -- Please install massif-visualizer for graphical heap memory usage. -- pybind11 v2.10.0 dev1 -- Configuring done -- Generating done -- Build files have been written to: /home/jenkins/util/avro/build/debug_clang Consolidate compiler generated dependencies of target avro_src [ 0%] Building CXX object src/CMakeFiles/avro_src.dir/include/avro.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/include/avro_params.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/adapt.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/cavity.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/collapses.cpp.o [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/filter.cpp.o [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/geometry.cpp.o [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/implied_metric.cpp.o [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/insertions.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/metric.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/parallel.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/primitive.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/properties.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/smoothing.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/swaps.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/crypto.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/error.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/kdtree.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/nearest_neighbours.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/process_cpu.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/process_gpu.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/process_mpi.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/tools.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/basis.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_line.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_pentatope.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_tetrahedron.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_triangle.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/element.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_line.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_nodes.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_pentatope.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_tetrahedron.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_triangle.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_line.cpp.o /home/jenkins/util/avro/src/lib/element/legendre_line.cpp:24:10: warning: unused variable 's' [-Wunused-variable] real_t s = x[0]; ^ 1 warning generated. [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_pentatope.cpp.o [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_tetrahedron.cpp.o [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_triangle.cpp.o [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/polytope.cpp.o [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/quadrature.cpp.o In file included from /home/jenkins/util/avro/src/lib/element/quadrature.cpp:14: /home/jenkins/util/avro/src/lib/element/quadrature_cp.h:1065:7: warning: misleading indentation; statement is not part of the previous 'for' [-Wmisleading-indentation] for (int k = 0; k < order; k++) ^ /home/jenkins/util/avro/src/lib/element/quadrature_cp.h:1061:5: note: previous statement is here for (int j = 0; j < nDim; j++) ^ 1 warning generated. [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/reference.cpp.o [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/simplex.cpp.o [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/trace2cell.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/body.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/entity.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/model.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/tessellation.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/body.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/context.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/data.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/model.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/object.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/psc/facet.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/psc/node.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/psc/object.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/application.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/bsp.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/camera.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/colormap.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/gl.cpp.o [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/gui.cpp.o /home/jenkins/util/avro/src/lib/graphics/gui.cpp:71:1: warning: unused function 'convert_to_char' [-Wunused-function] convert_to_char( const std::vector& s ) { ^ 1 warning generated. [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/math.cpp.o [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/opengl.cpp.o /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:475:11: warning: unused variable 'ncolor' [-Wunused-variable] index_t ncolor = 256*3; ^ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:486:26: warning: variable 'colormap_texture' is uninitialized when used here [-Wuninitialized] manager_.track_texture(colormap_texture); ^~~~~~~~~~~~~~~~ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:480:26: note: initialize the variable 'colormap_texture' to silence this warning GLuint colormap_texture; ^ = 0 /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:487:25: warning: variable 'colormap_buffer' is uninitialized when used here [-Wuninitialized] manager_.track_buffer(colormap_buffer); ^~~~~~~~~~~~~~~ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:471:27: note: initialize the variable 'colormap_buffer' to silence this warning gl_index colormap_buffer; ^ = 0 3 warnings generated. [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/plot.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/postscript.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/primitives.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/raytracer.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/shader.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/vao.cpp.o [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/vao_polytope.cpp.o /home/jenkins/util/avro/src/lib/graphics/vao_polytope.cpp:139:13: warning: misleading indentation; statement is not part of the previous 'for' [-Wmisleading-indentation] for (index_t j = 0; j < output.numberofpoints; j++) ^ /home/jenkins/util/avro/src/lib/graphics/vao_polytope.cpp:136:11: note: previous statement is here for (index_t j = 0; j < coordinates_.size()/3; j++) ^ 1 warning generated. [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/webglpp.cpp.o [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/websockets.cpp.o [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/window.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/ckf.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/csm.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/egads.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/eps.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/factory.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/field.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/library.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/meshb.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/metric.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/obj.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/plots.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/samples.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/spacetime.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/tesseract.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/boundary.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/builder.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/decomposition.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/dof.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/facets.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/field.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/interpolation.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/inverse.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/mesh.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/mpi.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/neighbours.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/partition.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/points.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/search.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/topology.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/topology_polytope.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/topology_simplex.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/functions.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/geometry.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/linear_algebra.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/mat.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/sym.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/tools.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/vec.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/orient4d.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side1_exact.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side2_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side3_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side4_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side5_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_10d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_3d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_4d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_5d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_6d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_7d.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_8d.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_9d.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/bowyer_watson.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/cell.cpp.o [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/cell_nd.cpp.o [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/diagram.cpp.o /home/jenkins/util/avro/src/lib/voronoi/diagram.cpp:189:9: warning: misleading indentation; statement is not part of the previous 'for' [-Wmisleading-indentation] add( polytope.data() , polytope.size() ); ^ /home/jenkins/util/avro/src/lib/voronoi/diagram.cpp:187:7: note: previous statement is here for (index_t i = 0; i < polytope.size(); i++) ^ 1 warning generated. [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/facets.cpp.o [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/optimal_transport.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/particles.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/vertex.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/bin/adapt.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/bin/animate.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/arguments.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/check.cpp.o /home/jenkins/util/avro/src/bin/check.cpp:66:19: warning: unused variable 'topology' [-Wunused-variable] Topology& topology = *static_cast*>(ptopology.get()); ^ 1 warning generated. [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/conformity.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/conformityp.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/convert.cpp.o [ 94%] Building CXX object src/CMakeFiles/avro_src.dir/bin/image.cpp.o [ 94%] Building CXX object src/CMakeFiles/avro_src.dir/bin/plot.cpp.o [ 94%] Built target avro_src Consolidate compiler generated dependencies of target avro_third_party [ 94%] Building CXX object src/third_party/CMakeFiles/avro_third_party.dir/geogram/kd_tree.cpp.o [ 94%] Building CXX object src/third_party/CMakeFiles/avro_third_party.dir/geogram/nn_search.cpp.o [100%] Built target avro_third_party [100%] Linking CXX static library ../lib/libavro.a [100%] Built target avro_static [100%] Linking CXX shared library ../lib/libavro.so [100%] Built target avro_shared [100%] Built target avro_lib make -C debug_intel --no-print-directory avro_lib -- Build type = debug -- lapack not found -- only supporting WebViewer -- Setting intel compiler flags -- CPU thread manager = c++11. -- GPU threading not enabled. GPU thread manager = serial. -- Please install kcachegrind for graphical profiling. -- Please install massif-visualizer for graphical heap memory usage. -- pybind11 v2.10.0 dev1 -- Configuring done -- Generating done -- Build files have been written to: /home/jenkins/util/avro/build/debug_intel Consolidate compiler generated dependencies of target avro_src [ 0%] Building CXX object src/CMakeFiles/avro_src.dir/include/avro.cpp.o In file included from /home/jenkins/util/avro/src/lib/graphics/plot.h(13), from /home/jenkins/util/avro/src/lib/graphics/application.h(16), from /home/jenkins/util/avro/src/include/avro.cpp(18): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/include/avro_params.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/adapt.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/cavity.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/collapses.cpp.o [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/filter.cpp.o [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/geometry.cpp.o [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/implied_metric.cpp.o [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/insertions.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/metric.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/parallel.cpp.o In file included from /home/jenkins/util/avro/src/lib/graphics/plot.h(13), from /home/jenkins/util/avro/src/lib/graphics/application.h(16), from /home/jenkins/util/avro/src/lib/adaptation/parallel.cpp(21): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/primitive.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/properties.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/smoothing.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/swaps.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/crypto.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/error.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/kdtree.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/nearest_neighbours.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/process_cpu.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/process_gpu.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/process_mpi.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/tools.cpp.o In file included from /home/jenkins/util/avro/src/lib/common/tools.cpp(14): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/basis.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_line.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_pentatope.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_tetrahedron.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_triangle.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/element.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_line.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_nodes.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_pentatope.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_tetrahedron.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_triangle.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_line.cpp.o [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_pentatope.cpp.o [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_tetrahedron.cpp.o [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_triangle.cpp.o [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/polytope.cpp.o [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/quadrature.cpp.o [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/reference.cpp.o [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/simplex.cpp.o [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/trace2cell.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/body.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/entity.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/model.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/tessellation.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/body.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/context.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/data.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/model.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/object.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/psc/facet.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/psc/node.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/psc/object.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/application.cpp.o In file included from /home/jenkins/util/avro/src/lib/graphics/plot.h(13), from /home/jenkins/util/avro/src/lib/graphics/application.h(16), from /home/jenkins/util/avro/src/lib/graphics/application.cpp(11): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/bsp.cpp.o In file included from /home/jenkins/util/avro/src/lib/graphics/plot.h(13), from /home/jenkins/util/avro/src/lib/graphics/bsp.h(18), from /home/jenkins/util/avro/src/lib/graphics/bsp.cpp(10): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/camera.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/colormap.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/gl.cpp.o In file included from /home/jenkins/util/avro/src/lib/graphics/gl.cpp(10): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/gui.cpp.o In file included from /home/jenkins/util/avro/src/lib/graphics/plot.h(13), from /home/jenkins/util/avro/src/lib/graphics/bsp.h(18), from /home/jenkins/util/avro/src/lib/graphics/gui.cpp(10): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/math.cpp.o [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/opengl.cpp.o In file included from /home/jenkins/util/avro/src/lib/graphics/plot.h(13), from /home/jenkins/util/avro/src/lib/graphics/application.h(16), from /home/jenkins/util/avro/src/lib/graphics/opengl.cpp(11): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/plot.cpp.o In file included from /home/jenkins/util/avro/src/lib/graphics/plot.h(13), from /home/jenkins/util/avro/src/lib/graphics/plot.cpp(12): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/postscript.cpp.o In file included from /home/jenkins/util/avro/src/lib/graphics/plot.h(13), from /home/jenkins/util/avro/src/lib/graphics/bsp.h(18), from /home/jenkins/util/avro/src/lib/graphics/postscript.cpp(10): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/primitives.cpp.o In file included from /home/jenkins/util/avro/src/lib/graphics/primitives.h(15), from /home/jenkins/util/avro/src/lib/graphics/primitives.cpp(12): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/raytracer.cpp.o In file included from /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp(12): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/shader.cpp.o In file included from /home/jenkins/util/avro/src/lib/graphics/shader.h(13), from /home/jenkins/util/avro/src/lib/graphics/shader.cpp(12): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/vao.cpp.o In file included from /home/jenkins/util/avro/src/lib/graphics/primitives.h(15), from /home/jenkins/util/avro/src/lib/graphics/vao.cpp(18): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/vao_polytope.cpp.o In file included from /home/jenkins/util/avro/src/lib/graphics/primitives.h(15), from /home/jenkins/util/avro/src/lib/graphics/vao_polytope.cpp(15): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/webglpp.cpp.o In file included from /home/jenkins/util/avro/src/lib/graphics/primitives.h(15), from /home/jenkins/util/avro/src/lib/graphics/webglpp.cpp(10): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/websockets.cpp.o [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/window.cpp.o In file included from /home/jenkins/util/avro/src/lib/graphics/vao.h(15), from /home/jenkins/util/avro/src/lib/graphics/window.cpp(11): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ /home/jenkins/util/avro/src/lib/graphics/window.cpp(265): warning #823: reference is to variable "d" (declared at line 261) -- under old for-init scoping rules it would have been variable "d" (declared at line 263) if (plot_[k]->length_scale() > d) ^ /home/jenkins/util/avro/src/lib/graphics/window.cpp(266): warning #823: reference is to variable "d" (declared at line 261) -- under old for-init scoping rules it would have been variable "d" (declared at line 263) d = plot_[k]->length_scale(); ^ [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/ckf.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/csm.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/egads.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/eps.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/factory.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/field.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/library.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/meshb.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/metric.cpp.o /home/jenkins/util/avro/src/lib/library/metric.h(245): warning #1011: missing return statement at end of non-void function "avro::library::MetricField_UniformGeometry::operator()(const avro::real_t={double} *) const" } ^ [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/obj.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/plots.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/samples.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/spacetime.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/tesseract.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/boundary.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/builder.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/decomposition.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/dof.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/facets.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/field.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/interpolation.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/inverse.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/mesh.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/mpi.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/neighbours.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/partition.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/points.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/search.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/topology.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/topology_polytope.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/topology_simplex.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/functions.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/geometry.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/linear_algebra.cpp.o /home/jenkins/util/avro/src/lib/numerics/linear_algebra.cpp(668): warning #1011: missing return statement at end of non-void function "avro::numerics::det(const avro::symd &) [with type=avro::real_t={double}]" } ^ detected during instantiation of "type avro::numerics::det(const avro::symd &) [with type=avro::real_t={double}]" at line 478 [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/mat.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/sym.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/tools.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/vec.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/orient4d.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side1_exact.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side2_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side3_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side4_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side5_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_10d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_3d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_4d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_5d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_6d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_7d.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_8d.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_9d.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/bowyer_watson.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/cell.cpp.o [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/cell_nd.cpp.o [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/diagram.cpp.o [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/facets.cpp.o [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/optimal_transport.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/particles.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/vertex.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/bin/adapt.cpp.o In file included from /home/jenkins/util/avro/src/lib/graphics/plot.h(13), from /home/jenkins/util/avro/src/lib/graphics/application.h(16), from /home/jenkins/util/avro/src/bin/adapt.cpp(20): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/bin/animate.cpp.o In file included from /home/jenkins/util/avro/src/bin/animate.cpp(6): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/arguments.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/check.cpp.o In file included from /home/jenkins/util/avro/src/lib/graphics/plot.h(13), from /home/jenkins/util/avro/src/lib/graphics/application.h(16), from /home/jenkins/util/avro/src/bin/check.cpp(10): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/conformity.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/conformityp.cpp.o In file included from /home/jenkins/util/avro/src/lib/graphics/plot.h(13), from /home/jenkins/util/avro/src/lib/graphics/application.h(16), from /home/jenkins/util/avro/src/bin/conformityp.cpp(12): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/convert.cpp.o In file included from /home/jenkins/util/avro/src/lib/graphics/plot.h(13), from /home/jenkins/util/avro/src/lib/graphics/application.h(16), from /home/jenkins/util/avro/src/bin/convert.cpp(8): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 94%] Building CXX object src/CMakeFiles/avro_src.dir/bin/image.cpp.o In file included from /home/jenkins/util/avro/src/lib/graphics/plot.h(13), from /home/jenkins/util/avro/src/lib/graphics/application.h(16), from /home/jenkins/util/avro/src/bin/image.cpp(10): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 94%] Building CXX object src/CMakeFiles/avro_src.dir/bin/plot.cpp.o In file included from /home/jenkins/util/avro/src/lib/graphics/plot.h(13), from /home/jenkins/util/avro/src/lib/graphics/application.h(16), from /home/jenkins/util/avro/src/bin/plot.cpp(10): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 94%] Built target avro_src Consolidate compiler generated dependencies of target avro_third_party [ 94%] Building CXX object src/third_party/CMakeFiles/avro_third_party.dir/geogram/kd_tree.cpp.o [ 94%] Building CXX object src/third_party/CMakeFiles/avro_third_party.dir/geogram/nn_search.cpp.o [100%] Built target avro_third_party [100%] Linking CXX static library ../lib/libavro.a [100%] Built target avro_static [100%] Linking CXX shared library ../lib/libavro.so [100%] Built target avro_shared [100%] Built target avro_lib make -C release_gnu9 --no-print-directory avro_lib -- Build type = release -- lapack not found -- only supporting WebViewer -- Setting gnu compiler flags -- CPU thread manager = c++11. -- GPU threading not enabled. GPU thread manager = serial. -- Please install kcachegrind for graphical profiling. -- Please install massif-visualizer for graphical heap memory usage. -- pybind11 v2.10.0 dev1 -- Configuring done -- Generating done -- Build files have been written to: /home/jenkins/util/avro/build/release_gnu9 Consolidate compiler generated dependencies of target avro_src [ 0%] Building CXX object src/CMakeFiles/avro_src.dir/include/avro.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/include/avro_params.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/adapt.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/cavity.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/collapses.cpp.o [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/filter.cpp.o /home/jenkins/util/avro/src/lib/adaptation/filter.cpp: In member function ‘void avro::Filter::generateCandidates(avro::Topology&, avro::MetricField&, avro::real_t, avro::Insert&)’: /home/jenkins/util/avro/src/lib/adaptation/filter.cpp:139:11: warning: variable ‘TIME0’ set but not used [-Wunused-but-set-variable] 139 | clock_t TIME0, TIME1; | ^~~~~ /home/jenkins/util/avro/src/lib/adaptation/filter.cpp:139:18: warning: variable ‘TIME1’ set but not used [-Wunused-but-set-variable] 139 | clock_t TIME0, TIME1; | ^~~~~ [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/geometry.cpp.o [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/implied_metric.cpp.o /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp: In instantiation of ‘void avro::ElementImpliedMetric::compute(const std::vector&) [with type = avro::Simplex]’: /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:638:16: required from here /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:96:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 96 | J_ = J0_*Jeq_; | ~~~^~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:99:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 99 | M_ = numerics::inverse( JJt ); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp: In instantiation of ‘void avro::ElementImpliedMetric::compute(const avro::Points&, const index_t*, avro::index_t) [with type = avro::Simplex; avro::index_t = long unsigned int]’: /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:638:16: required from here /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:110:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 110 | J_ = J0_*Jeq_; | ~~~^~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:113:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 113 | M_ = numerics::inverse( JJt ); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp: In instantiation of ‘void avro::ElementImpliedMetric::inverse(const avro::Points&, const index_t*, avro::index_t) [with type = avro::Simplex; avro::index_t = long unsigned int]’: /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:638:16: required from here /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:125:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 125 | J_ = J0_*Jeq_; | ~~~^~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:126:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 126 | M_ = J_*numerics::transpose(J_); // no inverse | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/insertions.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/metric.cpp.o /home/jenkins/util/avro/src/lib/adaptation/metric.cpp: In instantiation of ‘avro::real_t avro::MetricField::length(avro::index_t, avro::index_t) const [with type = avro::Simplex; avro::real_t = double; avro::index_t = long unsigned int]’: /home/jenkins/util/avro/src/lib/adaptation/metric.cpp:708:16: required from here /home/jenkins/util/avro/src/lib/adaptation/metric.cpp:146:10: warning: variable ‘dim’ set but not used [-Wunused-but-set-variable] 146 | coord_t dim = topology_.points().dim(); | ^~~ [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/parallel.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/primitive.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/properties.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/smoothing.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/swaps.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/crypto.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/error.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/kdtree.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/nearest_neighbours.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/process_cpu.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/process_gpu.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/process_mpi.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/tools.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/basis.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_line.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_pentatope.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_tetrahedron.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_triangle.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/element.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_line.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_nodes.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_pentatope.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_tetrahedron.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_triangle.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_line.cpp.o /home/jenkins/util/avro/src/lib/element/legendre_line.cpp: In static member function ‘static void avro::Legendre::eval(const double*, double*) [with int N = 1; int P = 0]’: /home/jenkins/util/avro/src/lib/element/legendre_line.cpp:24:10: warning: unused variable ‘s’ [-Wunused-variable] 24 | real_t s = x[0]; | ^ [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_pentatope.cpp.o [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_tetrahedron.cpp.o [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_triangle.cpp.o [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/polytope.cpp.o [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/quadrature.cpp.o /home/jenkins/util/avro/src/lib/element/quadrature.cpp: In instantiation of ‘void avro::QuadratureStore::build() [with type = avro::Simplex]’: /home/jenkins/util/avro/src/lib/element/quadrature.cpp:34:3: required from ‘avro::QuadratureStore::QuadratureStore(avro::BasisFunctionCategory) [with type = avro::Simplex]’ /home/jenkins/util/avro/src/lib/element/quadrature.cpp:22:83: required from here /home/jenkins/util/avro/src/lib/element/quadrature.cpp:89:16: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 89 | B[d] = matd( nb_basis , quad.nb() ); In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/quadrature.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/element/quadrature.cpp:110:16: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 110 | B[d] = Ainv*B[d]; // convert modal basis to nodal basis In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/quadrature.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/reference.cpp.o [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/simplex.cpp.o /home/jenkins/util/avro/src/lib/element/simplex.cpp: In member function ‘void avro::Simplex::precalculate()’: /home/jenkins/util/avro/src/lib/element/simplex.cpp:127:25: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 127 | for (index_t k = 0; k < number_+1; k++) | ~~^~~~~~~~~~~ [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/trace2cell.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/body.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/entity.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/model.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/tessellation.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/body.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/context.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/data.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/model.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/object.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/psc/facet.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/psc/node.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/psc/object.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/application.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/bsp.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/camera.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/colormap.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/gl.cpp.o [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/gui.cpp.o /home/jenkins/util/avro/src/lib/graphics/gui.cpp:71:1: warning: ‘std::vector avro::graphics::convert_to_char(const std::vector >&)’ defined but not used [-Wunused-function] 71 | convert_to_char( const std::vector& s ) { | ^~~~~~~~~~~~~~~ [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/math.cpp.o [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/opengl.cpp.o /home/jenkins/util/avro/src/lib/graphics/opengl.cpp: In member function ‘void avro::graphics::Window::select_colormap(const string&)’: /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:475:11: warning: unused variable ‘ncolor’ [-Wunused-variable] 475 | index_t ncolor = 256*3; | ^~~~~~ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp: In member function ‘void avro::graphics::ClipPlane::write()’: /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:418:28: warning: ‘buffers[0]’ is used uninitialized in this function [-Wuninitialized] 418 | point_buffer_ = buffers[0]; | ~~~~~~~~~^ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:419:28: warning: ‘buffers[1]’ is used uninitialized in this function [-Wuninitialized] 419 | index_buffer_ = buffers[1]; | ~~~~~~~~~^ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:418:28: warning: ‘buffers’ is used uninitialized in this function [-Wuninitialized] 418 | point_buffer_ = buffers[0]; | ~~~~~~~~~^ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp: In member function ‘void avro::graphics::Window::select_colormap(const string&)’: /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:480:10: warning: ‘colormap_texture’ may be used uninitialized in this function [-Wmaybe-uninitialized] 480 | GLuint colormap_texture; | ^~~~~~~~~~~~~~~~ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:471:12: warning: ‘colormap_buffer’ may be used uninitialized in this function [-Wmaybe-uninitialized] 471 | gl_index colormap_buffer; | ^~~~~~~~~~~~~~~ [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/plot.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/postscript.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/primitives.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/raytracer.cpp.o /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp: In member function ‘void avro::graphics::Canvas::convert()’: /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp:97:25: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 97 | for (index_t i = 0; i < height_; i++) | ~~^~~~~~~~~ /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp:98:25: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 98 | for (index_t j = 0; j < width_; j++) | ~~^~~~~~~~ /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp: In member function ‘void avro::graphics::RayTracer::render()’: /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp:435:27: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 435 | for (index_t j = 0; j < canvas_.width(); j++) { | ~~^~~~~~~~~~~~~~~~~ [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/shader.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/vao.cpp.o [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/vao_polytope.cpp.o /home/jenkins/util/avro/src/lib/graphics/vao_polytope.cpp: In member function ‘void avro::graphics::PolytopeDecomposition::triangulate()’: /home/jenkins/util/avro/src/lib/graphics/vao_polytope.cpp:136:11: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 136 | for (index_t j = 0; j < coordinates_.size()/3; j++) | ^~~ /home/jenkins/util/avro/src/lib/graphics/vao_polytope.cpp:139:13: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 139 | for (index_t j = 0; j < output.numberofpoints; j++) | ^~~ /home/jenkins/util/avro/src/lib/graphics/vao_polytope.cpp:139:35: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 139 | for (index_t j = 0; j < output.numberofpoints; j++) | ~~^~~~~~~~~~~~~~~~~~~~~~~ [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/webglpp.cpp.o [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/websockets.cpp.o [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/window.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/ckf.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/csm.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/egads.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/eps.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/factory.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/field.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/library.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/meshb.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/metric.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/obj.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/plots.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/samples.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/spacetime.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/tesseract.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/boundary.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/builder.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/decomposition.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/dof.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/facets.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/field.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/interpolation.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/inverse.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/mesh.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/mpi.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/neighbours.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/partition.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/points.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/search.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/topology.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/topology_polytope.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/topology_simplex.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/functions.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/geometry.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/linear_algebra.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/mat.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/sym.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/tools.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/vec.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/orient4d.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side1_exact.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side2_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side3_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side4_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side5_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_10d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_3d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_4d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_5d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_6d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_7d.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_8d.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_9d.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/bowyer_watson.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/cell.cpp.o [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/cell_nd.cpp.o [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/diagram.cpp.o /home/jenkins/util/avro/src/lib/voronoi/diagram.cpp: In member function ‘void avro::voronoi::PowerDiagram::add_cell(const avro::voronoi::Cell&, bool)’: /home/jenkins/util/avro/src/lib/voronoi/diagram.cpp:187:7: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 187 | for (index_t i = 0; i < polytope.size(); i++) | ^~~ /home/jenkins/util/avro/src/lib/voronoi/diagram.cpp:189:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 189 | add( polytope.data() , polytope.size() ); | ^~~ [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/facets.cpp.o [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/optimal_transport.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/particles.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/vertex.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/bin/adapt.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/bin/animate.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/arguments.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/check.cpp.o /home/jenkins/util/avro/src/bin/check.cpp: In function ‘int avro::programs::check(int, const char**)’: /home/jenkins/util/avro/src/bin/check.cpp:66:19: warning: unused variable ‘topology’ [-Wunused-variable] 66 | Topology& topology = *static_cast*>(ptopology.get()); | ^~~~~~~~ [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/conformity.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/conformityp.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/convert.cpp.o [ 94%] Building CXX object src/CMakeFiles/avro_src.dir/bin/image.cpp.o [ 94%] Building CXX object src/CMakeFiles/avro_src.dir/bin/plot.cpp.o [ 94%] Built target avro_src Consolidate compiler generated dependencies of target avro_third_party [ 94%] Building CXX object src/third_party/CMakeFiles/avro_third_party.dir/geogram/kd_tree.cpp.o [ 94%] Building CXX object src/third_party/CMakeFiles/avro_third_party.dir/geogram/nn_search.cpp.o [100%] Built target avro_third_party [100%] Linking CXX static library ../lib/libavro.a [100%] Built target avro_static [100%] Linking CXX shared library ../lib/libavro.so [100%] Built target avro_shared [100%] Built target avro_lib make -C release_gnu10 --no-print-directory avro_lib -- Build type = release -- lapack not found -- only supporting WebViewer -- Setting gnu compiler flags -- CPU thread manager = c++11. -- GPU threading not enabled. GPU thread manager = serial. -- Please install kcachegrind for graphical profiling. -- Please install massif-visualizer for graphical heap memory usage. -- pybind11 v2.10.0 dev1 -- Configuring done -- Generating done -- Build files have been written to: /home/jenkins/util/avro/build/release_gnu10 Consolidate compiler generated dependencies of target avro_src [ 0%] Building CXX object src/CMakeFiles/avro_src.dir/include/avro.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/include/avro_params.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/adapt.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/cavity.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/collapses.cpp.o [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/filter.cpp.o /home/jenkins/util/avro/src/lib/adaptation/filter.cpp: In member function ‘void avro::Filter::generateCandidates(avro::Topology&, avro::MetricField&, avro::real_t, avro::Insert&)’: /home/jenkins/util/avro/src/lib/adaptation/filter.cpp:139:11: warning: variable ‘TIME0’ set but not used [-Wunused-but-set-variable] 139 | clock_t TIME0, TIME1; | ^~~~~ /home/jenkins/util/avro/src/lib/adaptation/filter.cpp:139:18: warning: variable ‘TIME1’ set but not used [-Wunused-but-set-variable] 139 | clock_t TIME0, TIME1; | ^~~~~ [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/geometry.cpp.o [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/implied_metric.cpp.o /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp: In instantiation of ‘void avro::ElementImpliedMetric::compute(const std::vector&) [with type = avro::Simplex]’: /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:638:16: required from here /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:96:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 96 | J_ = J0_*Jeq_; | ~~~^~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:99:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 99 | M_ = numerics::inverse( JJt ); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp: In instantiation of ‘void avro::ElementImpliedMetric::compute(const avro::Points&, const index_t*, avro::index_t) [with type = avro::Simplex; avro::index_t = long unsigned int]’: /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:638:16: required from here /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:110:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 110 | J_ = J0_*Jeq_; | ~~~^~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:113:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 113 | M_ = numerics::inverse( JJt ); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp: In instantiation of ‘void avro::ElementImpliedMetric::inverse(const avro::Points&, const index_t*, avro::index_t) [with type = avro::Simplex; avro::index_t = long unsigned int]’: /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:638:16: required from here /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:125:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 125 | J_ = J0_*Jeq_; | ~~~^~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:126:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 126 | M_ = J_*numerics::transpose(J_); // no inverse | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/insertions.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/metric.cpp.o /home/jenkins/util/avro/src/lib/adaptation/metric.cpp: In instantiation of ‘avro::real_t avro::MetricField::length(avro::index_t, avro::index_t) const [with type = avro::Simplex; avro::real_t = double; avro::index_t = long unsigned int]’: /home/jenkins/util/avro/src/lib/adaptation/metric.cpp:708:16: required from here /home/jenkins/util/avro/src/lib/adaptation/metric.cpp:146:10: warning: variable ‘dim’ set but not used [-Wunused-but-set-variable] 146 | coord_t dim = topology_.points().dim(); | ^~~ [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/parallel.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/primitive.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/properties.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/smoothing.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/swaps.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/crypto.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/error.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/kdtree.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/nearest_neighbours.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/process_cpu.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/process_gpu.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/process_mpi.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/tools.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/basis.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_line.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_pentatope.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_tetrahedron.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_triangle.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/element.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_line.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_nodes.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_pentatope.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_tetrahedron.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_triangle.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_line.cpp.o /home/jenkins/util/avro/src/lib/element/legendre_line.cpp: In static member function ‘static void avro::Legendre::eval(const double*, double*) [with int N = 1; int P = 0]’: /home/jenkins/util/avro/src/lib/element/legendre_line.cpp:24:10: warning: unused variable ‘s’ [-Wunused-variable] 24 | real_t s = x[0]; | ^ [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_pentatope.cpp.o [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_tetrahedron.cpp.o [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_triangle.cpp.o [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/polytope.cpp.o [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/quadrature.cpp.o /home/jenkins/util/avro/src/lib/element/quadrature.cpp: In instantiation of ‘void avro::QuadratureStore::build() [with type = avro::Simplex]’: /home/jenkins/util/avro/src/lib/element/quadrature.cpp:34:3: required from ‘avro::QuadratureStore::QuadratureStore(avro::BasisFunctionCategory) [with type = avro::Simplex]’ /home/jenkins/util/avro/src/lib/element/quadrature.cpp:22:83: required from here /home/jenkins/util/avro/src/lib/element/quadrature.cpp:89:16: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 89 | B[d] = matd( nb_basis , quad.nb() ); In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/quadrature.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/element/quadrature.cpp:110:16: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 110 | B[d] = Ainv*B[d]; // convert modal basis to nodal basis In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/quadrature.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/reference.cpp.o [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/simplex.cpp.o /home/jenkins/util/avro/src/lib/element/simplex.cpp: In member function ‘void avro::Simplex::precalculate()’: /home/jenkins/util/avro/src/lib/element/simplex.cpp:127:25: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 127 | for (index_t k = 0; k < number_+1; k++) | ~~^~~~~~~~~~~ [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/trace2cell.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/body.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/entity.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/model.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/tessellation.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/body.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/context.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/data.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/model.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/object.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/psc/facet.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/psc/node.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/psc/object.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/application.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/bsp.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/camera.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/colormap.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/gl.cpp.o [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/gui.cpp.o /home/jenkins/util/avro/src/lib/graphics/gui.cpp:71:1: warning: ‘std::vector avro::graphics::convert_to_char(const std::vector >&)’ defined but not used [-Wunused-function] 71 | convert_to_char( const std::vector& s ) { | ^~~~~~~~~~~~~~~ [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/math.cpp.o [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/opengl.cpp.o /home/jenkins/util/avro/src/lib/graphics/opengl.cpp: In member function ‘void avro::graphics::Window::select_colormap(const string&)’: /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:475:11: warning: unused variable ‘ncolor’ [-Wunused-variable] 475 | index_t ncolor = 256*3; | ^~~~~~ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp: In member function ‘void avro::graphics::ClipPlane::write()’: /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:418:28: warning: ‘buffers[0]’ is used uninitialized in this function [-Wuninitialized] 418 | point_buffer_ = buffers[0]; | ~~~~~~~~~^ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:419:28: warning: ‘buffers[1]’ is used uninitialized in this function [-Wuninitialized] 419 | index_buffer_ = buffers[1]; | ~~~~~~~~~^ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:418:28: warning: ‘buffers’ is used uninitialized in this function [-Wuninitialized] 418 | point_buffer_ = buffers[0]; | ~~~~~~~~~^ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp: In member function ‘void avro::graphics::Window::select_colormap(const string&)’: /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:480:10: warning: ‘colormap_texture’ may be used uninitialized in this function [-Wmaybe-uninitialized] 480 | GLuint colormap_texture; | ^~~~~~~~~~~~~~~~ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:471:12: warning: ‘colormap_buffer’ may be used uninitialized in this function [-Wmaybe-uninitialized] 471 | gl_index colormap_buffer; | ^~~~~~~~~~~~~~~ [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/plot.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/postscript.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/primitives.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/raytracer.cpp.o /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp: In member function ‘void avro::graphics::Canvas::convert()’: /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp:97:25: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 97 | for (index_t i = 0; i < height_; i++) | ~~^~~~~~~~~ /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp:98:25: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 98 | for (index_t j = 0; j < width_; j++) | ~~^~~~~~~~ /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp: In member function ‘void avro::graphics::RayTracer::render()’: /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp:435:27: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 435 | for (index_t j = 0; j < canvas_.width(); j++) { | ~~^~~~~~~~~~~~~~~~~ [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/shader.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/vao.cpp.o [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/vao_polytope.cpp.o /home/jenkins/util/avro/src/lib/graphics/vao_polytope.cpp: In member function ‘void avro::graphics::PolytopeDecomposition::triangulate()’: /home/jenkins/util/avro/src/lib/graphics/vao_polytope.cpp:136:11: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 136 | for (index_t j = 0; j < coordinates_.size()/3; j++) | ^~~ /home/jenkins/util/avro/src/lib/graphics/vao_polytope.cpp:139:13: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 139 | for (index_t j = 0; j < output.numberofpoints; j++) | ^~~ /home/jenkins/util/avro/src/lib/graphics/vao_polytope.cpp:139:35: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 139 | for (index_t j = 0; j < output.numberofpoints; j++) | ~~^~~~~~~~~~~~~~~~~~~~~~~ [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/webglpp.cpp.o [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/websockets.cpp.o [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/window.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/ckf.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/csm.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/egads.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/eps.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/factory.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/field.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/library.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/meshb.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/metric.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/obj.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/plots.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/samples.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/spacetime.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/tesseract.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/boundary.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/builder.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/decomposition.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/dof.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/facets.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/field.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/interpolation.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/inverse.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/mesh.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/mpi.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/neighbours.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/partition.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/points.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/search.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/topology.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/topology_polytope.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/topology_simplex.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/functions.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/geometry.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/linear_algebra.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/mat.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/sym.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/tools.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/vec.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/orient4d.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side1_exact.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side2_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side3_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side4_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side5_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_10d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_3d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_4d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_5d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_6d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_7d.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_8d.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_9d.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/bowyer_watson.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/cell.cpp.o [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/cell_nd.cpp.o [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/diagram.cpp.o /home/jenkins/util/avro/src/lib/voronoi/diagram.cpp: In member function ‘void avro::voronoi::PowerDiagram::add_cell(const avro::voronoi::Cell&, bool)’: /home/jenkins/util/avro/src/lib/voronoi/diagram.cpp:187:7: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 187 | for (index_t i = 0; i < polytope.size(); i++) | ^~~ /home/jenkins/util/avro/src/lib/voronoi/diagram.cpp:189:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 189 | add( polytope.data() , polytope.size() ); | ^~~ [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/facets.cpp.o [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/optimal_transport.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/particles.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/vertex.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/bin/adapt.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/bin/animate.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/arguments.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/check.cpp.o /home/jenkins/util/avro/src/bin/check.cpp: In function ‘int avro::programs::check(int, const char**)’: /home/jenkins/util/avro/src/bin/check.cpp:66:19: warning: unused variable ‘topology’ [-Wunused-variable] 66 | Topology& topology = *static_cast*>(ptopology.get()); | ^~~~~~~~ [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/conformity.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/conformityp.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/convert.cpp.o [ 94%] Building CXX object src/CMakeFiles/avro_src.dir/bin/image.cpp.o [ 94%] Building CXX object src/CMakeFiles/avro_src.dir/bin/plot.cpp.o [ 94%] Built target avro_src Consolidate compiler generated dependencies of target avro_third_party [ 94%] Building CXX object src/third_party/CMakeFiles/avro_third_party.dir/geogram/kd_tree.cpp.o [ 94%] Building CXX object src/third_party/CMakeFiles/avro_third_party.dir/geogram/nn_search.cpp.o [100%] Built target avro_third_party [100%] Linking CXX static library ../lib/libavro.a [100%] Built target avro_static [100%] Linking CXX shared library ../lib/libavro.so [100%] Built target avro_shared [100%] Built target avro_lib make -C release_gnu11 --no-print-directory avro_lib -- Build type = release -- lapack not found -- only supporting WebViewer -- Setting gnu compiler flags -- CPU thread manager = c++11. -- GPU threading not enabled. GPU thread manager = serial. -- Please install kcachegrind for graphical profiling. -- Please install massif-visualizer for graphical heap memory usage. -- pybind11 v2.10.0 dev1 -- Configuring done -- Generating done -- Build files have been written to: /home/jenkins/util/avro/build/release_gnu11 Consolidate compiler generated dependencies of target avro_src [ 0%] Building CXX object src/CMakeFiles/avro_src.dir/include/avro.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/include/avro_params.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/adapt.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/cavity.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/collapses.cpp.o [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/filter.cpp.o /home/jenkins/util/avro/src/lib/adaptation/filter.cpp: In member function ‘void avro::Filter::generateCandidates(avro::Topology&, avro::MetricField&, avro::real_t, avro::Insert&)’: /home/jenkins/util/avro/src/lib/adaptation/filter.cpp:139:11: warning: variable ‘TIME0’ set but not used [-Wunused-but-set-variable] 139 | clock_t TIME0, TIME1; | ^~~~~ /home/jenkins/util/avro/src/lib/adaptation/filter.cpp:139:18: warning: variable ‘TIME1’ set but not used [-Wunused-but-set-variable] 139 | clock_t TIME0, TIME1; | ^~~~~ [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/geometry.cpp.o [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/implied_metric.cpp.o /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp: In instantiation of ‘void avro::ElementImpliedMetric::compute(const std::vector&) [with type = avro::Simplex]’: /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:638:16: required from here /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:96:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 96 | J_ = J0_*Jeq_; | ~~~^~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:99:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 99 | M_ = numerics::inverse( JJt ); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp: In instantiation of ‘void avro::ElementImpliedMetric::compute(const avro::Points&, const index_t*, avro::index_t) [with type = avro::Simplex; avro::index_t = long unsigned int]’: /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:638:16: required from here /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:110:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 110 | J_ = J0_*Jeq_; | ~~~^~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:113:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 113 | M_ = numerics::inverse( JJt ); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp: In instantiation of ‘void avro::ElementImpliedMetric::inverse(const avro::Points&, const index_t*, avro::index_t) [with type = avro::Simplex; avro::index_t = long unsigned int]’: /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:638:16: required from here /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:125:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 125 | J_ = J0_*Jeq_; | ~~~^~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:126:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 126 | M_ = J_*numerics::transpose(J_); // no inverse | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/insertions.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/metric.cpp.o /home/jenkins/util/avro/src/lib/adaptation/metric.cpp: In instantiation of ‘avro::real_t avro::MetricField::length(avro::index_t, avro::index_t) const [with type = avro::Simplex; avro::real_t = double; avro::index_t = long unsigned int]’: /home/jenkins/util/avro/src/lib/adaptation/metric.cpp:708:16: required from here /home/jenkins/util/avro/src/lib/adaptation/metric.cpp:146:10: warning: variable ‘dim’ set but not used [-Wunused-but-set-variable] 146 | coord_t dim = topology_.points().dim(); | ^~~ [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/parallel.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/primitive.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/properties.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/smoothing.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/swaps.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/crypto.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/error.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/kdtree.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/nearest_neighbours.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/process_cpu.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/process_gpu.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/process_mpi.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/tools.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/basis.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_line.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_pentatope.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_tetrahedron.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_triangle.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/element.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_line.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_nodes.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_pentatope.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_tetrahedron.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_triangle.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_line.cpp.o /home/jenkins/util/avro/src/lib/element/legendre_line.cpp: In static member function ‘static void avro::Legendre::eval(const double*, double*) [with int N = 1; int P = 0]’: /home/jenkins/util/avro/src/lib/element/legendre_line.cpp:24:10: warning: unused variable ‘s’ [-Wunused-variable] 24 | real_t s = x[0]; | ^ [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_pentatope.cpp.o [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_tetrahedron.cpp.o [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_triangle.cpp.o [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/polytope.cpp.o [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/quadrature.cpp.o /home/jenkins/util/avro/src/lib/element/quadrature.cpp: In instantiation of ‘void avro::QuadratureStore::build() [with type = avro::Simplex]’: /home/jenkins/util/avro/src/lib/element/quadrature.cpp:34:3: required from ‘avro::QuadratureStore::QuadratureStore(avro::BasisFunctionCategory) [with type = avro::Simplex]’ /home/jenkins/util/avro/src/lib/element/quadrature.cpp:22:83: required from here /home/jenkins/util/avro/src/lib/element/quadrature.cpp:89:16: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 89 | B[d] = matd( nb_basis , quad.nb() ); In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/quadrature.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/element/quadrature.cpp:110:16: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 110 | B[d] = Ainv*B[d]; // convert modal basis to nodal basis In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/quadrature.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/reference.cpp.o [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/simplex.cpp.o /home/jenkins/util/avro/src/lib/element/simplex.cpp: In member function ‘void avro::Simplex::precalculate()’: /home/jenkins/util/avro/src/lib/element/simplex.cpp:127:25: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 127 | for (index_t k = 0; k < number_+1; k++) | ~~^~~~~~~~~~~ [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/trace2cell.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/body.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/entity.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/model.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/tessellation.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/body.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/context.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/data.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/model.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/object.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/psc/facet.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/psc/node.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/psc/object.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/application.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/bsp.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/camera.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/colormap.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/gl.cpp.o [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/gui.cpp.o /home/jenkins/util/avro/src/lib/graphics/gui.cpp:71:1: warning: ‘std::vector avro::graphics::convert_to_char(const std::vector >&)’ defined but not used [-Wunused-function] 71 | convert_to_char( const std::vector& s ) { | ^~~~~~~~~~~~~~~ [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/math.cpp.o [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/opengl.cpp.o /home/jenkins/util/avro/src/lib/graphics/opengl.cpp: In member function ‘void avro::graphics::Window::select_colormap(const string&)’: /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:475:11: warning: unused variable ‘ncolor’ [-Wunused-variable] 475 | index_t ncolor = 256*3; | ^~~~~~ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp: In member function ‘void avro::graphics::ClipPlane::write()’: /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:418:28: warning: ‘buffers[0]’ is used uninitialized in this function [-Wuninitialized] 418 | point_buffer_ = buffers[0]; | ~~~~~~~~~^ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:419:28: warning: ‘buffers[1]’ is used uninitialized in this function [-Wuninitialized] 419 | index_buffer_ = buffers[1]; | ~~~~~~~~~^ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:418:28: warning: ‘buffers’ is used uninitialized in this function [-Wuninitialized] 418 | point_buffer_ = buffers[0]; | ~~~~~~~~~^ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp: In member function ‘void avro::graphics::Window::select_colormap(const string&)’: /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:480:10: warning: ‘colormap_texture’ may be used uninitialized in this function [-Wmaybe-uninitialized] 480 | GLuint colormap_texture; | ^~~~~~~~~~~~~~~~ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:471:12: warning: ‘colormap_buffer’ may be used uninitialized in this function [-Wmaybe-uninitialized] 471 | gl_index colormap_buffer; | ^~~~~~~~~~~~~~~ [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/plot.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/postscript.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/primitives.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/raytracer.cpp.o /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp: In member function ‘void avro::graphics::Canvas::convert()’: /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp:97:25: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 97 | for (index_t i = 0; i < height_; i++) | ~~^~~~~~~~~ /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp:98:25: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 98 | for (index_t j = 0; j < width_; j++) | ~~^~~~~~~~ /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp: In member function ‘void avro::graphics::RayTracer::render()’: /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp:435:27: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 435 | for (index_t j = 0; j < canvas_.width(); j++) { | ~~^~~~~~~~~~~~~~~~~ [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/shader.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/vao.cpp.o [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/vao_polytope.cpp.o /home/jenkins/util/avro/src/lib/graphics/vao_polytope.cpp: In member function ‘void avro::graphics::PolytopeDecomposition::triangulate()’: /home/jenkins/util/avro/src/lib/graphics/vao_polytope.cpp:136:11: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 136 | for (index_t j = 0; j < coordinates_.size()/3; j++) | ^~~ /home/jenkins/util/avro/src/lib/graphics/vao_polytope.cpp:139:13: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 139 | for (index_t j = 0; j < output.numberofpoints; j++) | ^~~ /home/jenkins/util/avro/src/lib/graphics/vao_polytope.cpp:139:35: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 139 | for (index_t j = 0; j < output.numberofpoints; j++) | ~~^~~~~~~~~~~~~~~~~~~~~~~ [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/webglpp.cpp.o [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/websockets.cpp.o [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/window.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/ckf.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/csm.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/egads.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/eps.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/factory.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/field.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/library.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/meshb.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/metric.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/obj.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/plots.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/samples.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/spacetime.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/tesseract.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/boundary.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/builder.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/decomposition.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/dof.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/facets.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/field.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/interpolation.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/inverse.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/mesh.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/mpi.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/neighbours.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/partition.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/points.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/search.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/topology.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/topology_polytope.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/topology_simplex.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/functions.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/geometry.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/linear_algebra.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/mat.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/sym.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/tools.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/vec.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/orient4d.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side1_exact.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side2_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side3_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side4_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side5_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_10d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_3d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_4d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_5d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_6d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_7d.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_8d.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_9d.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/bowyer_watson.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/cell.cpp.o [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/cell_nd.cpp.o [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/diagram.cpp.o /home/jenkins/util/avro/src/lib/voronoi/diagram.cpp: In member function ‘void avro::voronoi::PowerDiagram::add_cell(const avro::voronoi::Cell&, bool)’: /home/jenkins/util/avro/src/lib/voronoi/diagram.cpp:187:7: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 187 | for (index_t i = 0; i < polytope.size(); i++) | ^~~ /home/jenkins/util/avro/src/lib/voronoi/diagram.cpp:189:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 189 | add( polytope.data() , polytope.size() ); | ^~~ [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/facets.cpp.o [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/optimal_transport.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/particles.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/vertex.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/bin/adapt.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/bin/animate.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/arguments.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/check.cpp.o /home/jenkins/util/avro/src/bin/check.cpp: In function ‘int avro::programs::check(int, const char**)’: /home/jenkins/util/avro/src/bin/check.cpp:66:19: warning: unused variable ‘topology’ [-Wunused-variable] 66 | Topology& topology = *static_cast*>(ptopology.get()); | ^~~~~~~~ [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/conformity.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/conformityp.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/convert.cpp.o [ 94%] Building CXX object src/CMakeFiles/avro_src.dir/bin/image.cpp.o [ 94%] Building CXX object src/CMakeFiles/avro_src.dir/bin/plot.cpp.o [ 94%] Built target avro_src Consolidate compiler generated dependencies of target avro_third_party [ 94%] Building CXX object src/third_party/CMakeFiles/avro_third_party.dir/geogram/kd_tree.cpp.o [ 94%] Building CXX object src/third_party/CMakeFiles/avro_third_party.dir/geogram/nn_search.cpp.o [100%] Built target avro_third_party [100%] Linking CXX static library ../lib/libavro.a [100%] Built target avro_static [100%] Linking CXX shared library ../lib/libavro.so [100%] Built target avro_shared [100%] Built target avro_lib make -C release_clang --no-print-directory avro_lib -- Build type = release -- lapack not found -- only supporting WebViewer -- Setting clang compiler flags -- CPU thread manager = c++11. -- GPU threading not enabled. GPU thread manager = serial. -- Please install kcachegrind for graphical profiling. -- Please install massif-visualizer for graphical heap memory usage. -- pybind11 v2.10.0 dev1 -- Configuring done -- Generating done -- Build files have been written to: /home/jenkins/util/avro/build/release_clang Consolidate compiler generated dependencies of target avro_src [ 0%] Building CXX object src/CMakeFiles/avro_src.dir/include/avro.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/include/avro_params.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/adapt.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/cavity.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/collapses.cpp.o [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/filter.cpp.o [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/geometry.cpp.o [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/implied_metric.cpp.o [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/insertions.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/metric.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/parallel.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/primitive.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/properties.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/smoothing.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/swaps.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/crypto.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/error.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/kdtree.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/nearest_neighbours.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/process_cpu.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/process_gpu.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/process_mpi.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/tools.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/basis.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_line.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_pentatope.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_tetrahedron.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_triangle.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/element.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_line.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_nodes.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_pentatope.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_tetrahedron.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_triangle.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_line.cpp.o /home/jenkins/util/avro/src/lib/element/legendre_line.cpp:24:10: warning: unused variable 's' [-Wunused-variable] real_t s = x[0]; ^ 1 warning generated. [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_pentatope.cpp.o [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_tetrahedron.cpp.o [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_triangle.cpp.o [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/polytope.cpp.o [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/quadrature.cpp.o In file included from /home/jenkins/util/avro/src/lib/element/quadrature.cpp:14: /home/jenkins/util/avro/src/lib/element/quadrature_cp.h:1065:7: warning: misleading indentation; statement is not part of the previous 'for' [-Wmisleading-indentation] for (int k = 0; k < order; k++) ^ /home/jenkins/util/avro/src/lib/element/quadrature_cp.h:1061:5: note: previous statement is here for (int j = 0; j < nDim; j++) ^ 1 warning generated. [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/reference.cpp.o [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/simplex.cpp.o [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/trace2cell.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/body.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/entity.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/model.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/tessellation.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/body.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/context.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/data.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/model.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/object.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/psc/facet.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/psc/node.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/psc/object.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/application.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/bsp.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/camera.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/colormap.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/gl.cpp.o [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/gui.cpp.o /home/jenkins/util/avro/src/lib/graphics/gui.cpp:71:1: warning: unused function 'convert_to_char' [-Wunused-function] convert_to_char( const std::vector& s ) { ^ 1 warning generated. [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/math.cpp.o [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/opengl.cpp.o /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:475:11: warning: unused variable 'ncolor' [-Wunused-variable] index_t ncolor = 256*3; ^ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:486:26: warning: variable 'colormap_texture' is uninitialized when used here [-Wuninitialized] manager_.track_texture(colormap_texture); ^~~~~~~~~~~~~~~~ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:480:26: note: initialize the variable 'colormap_texture' to silence this warning GLuint colormap_texture; ^ = 0 /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:487:25: warning: variable 'colormap_buffer' is uninitialized when used here [-Wuninitialized] manager_.track_buffer(colormap_buffer); ^~~~~~~~~~~~~~~ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:471:27: note: initialize the variable 'colormap_buffer' to silence this warning gl_index colormap_buffer; ^ = 0 3 warnings generated. [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/plot.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/postscript.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/primitives.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/raytracer.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/shader.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/vao.cpp.o [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/vao_polytope.cpp.o /home/jenkins/util/avro/src/lib/graphics/vao_polytope.cpp:139:13: warning: misleading indentation; statement is not part of the previous 'for' [-Wmisleading-indentation] for (index_t j = 0; j < output.numberofpoints; j++) ^ /home/jenkins/util/avro/src/lib/graphics/vao_polytope.cpp:136:11: note: previous statement is here for (index_t j = 0; j < coordinates_.size()/3; j++) ^ 1 warning generated. [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/webglpp.cpp.o [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/websockets.cpp.o [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/window.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/ckf.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/csm.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/egads.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/eps.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/factory.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/field.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/library.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/meshb.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/metric.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/obj.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/plots.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/samples.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/spacetime.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/tesseract.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/boundary.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/builder.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/decomposition.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/dof.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/facets.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/field.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/interpolation.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/inverse.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/mesh.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/mpi.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/neighbours.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/partition.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/points.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/search.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/topology.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/topology_polytope.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/topology_simplex.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/functions.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/geometry.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/linear_algebra.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/mat.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/sym.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/tools.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/vec.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/orient4d.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side1_exact.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side2_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side3_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side4_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side5_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_10d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_3d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_4d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_5d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_6d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_7d.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_8d.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_9d.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/bowyer_watson.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/cell.cpp.o [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/cell_nd.cpp.o [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/diagram.cpp.o /home/jenkins/util/avro/src/lib/voronoi/diagram.cpp:189:9: warning: misleading indentation; statement is not part of the previous 'for' [-Wmisleading-indentation] add( polytope.data() , polytope.size() ); ^ /home/jenkins/util/avro/src/lib/voronoi/diagram.cpp:187:7: note: previous statement is here for (index_t i = 0; i < polytope.size(); i++) ^ 1 warning generated. [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/facets.cpp.o [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/optimal_transport.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/particles.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/vertex.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/bin/adapt.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/bin/animate.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/arguments.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/check.cpp.o /home/jenkins/util/avro/src/bin/check.cpp:66:19: warning: unused variable 'topology' [-Wunused-variable] Topology& topology = *static_cast*>(ptopology.get()); ^ 1 warning generated. [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/conformity.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/conformityp.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/convert.cpp.o [ 94%] Building CXX object src/CMakeFiles/avro_src.dir/bin/image.cpp.o [ 94%] Building CXX object src/CMakeFiles/avro_src.dir/bin/plot.cpp.o [ 94%] Built target avro_src Consolidate compiler generated dependencies of target avro_third_party [ 94%] Building CXX object src/third_party/CMakeFiles/avro_third_party.dir/geogram/kd_tree.cpp.o [ 94%] Building CXX object src/third_party/CMakeFiles/avro_third_party.dir/geogram/nn_search.cpp.o [100%] Built target avro_third_party [100%] Linking CXX static library ../lib/libavro.a [100%] Built target avro_static [100%] Linking CXX shared library ../lib/libavro.so [100%] Built target avro_shared [100%] Built target avro_lib make -C release_intel --no-print-directory avro_lib -- Build type = release -- lapack not found -- only supporting WebViewer -- Setting intel compiler flags -- CPU thread manager = c++11. -- GPU threading not enabled. GPU thread manager = serial. -- Please install kcachegrind for graphical profiling. -- Please install massif-visualizer for graphical heap memory usage. -- pybind11 v2.10.0 dev1 -- Configuring done -- Generating done -- Build files have been written to: /home/jenkins/util/avro/build/release_intel Consolidate compiler generated dependencies of target avro_src [ 0%] Building CXX object src/CMakeFiles/avro_src.dir/include/avro.cpp.o In file included from /home/jenkins/util/avro/src/lib/graphics/plot.h(13), from /home/jenkins/util/avro/src/lib/graphics/application.h(16), from /home/jenkins/util/avro/src/include/avro.cpp(18): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/include/avro_params.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/adapt.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/cavity.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/collapses.cpp.o [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/filter.cpp.o [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/geometry.cpp.o [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/implied_metric.cpp.o [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/insertions.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/metric.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/parallel.cpp.o In file included from /home/jenkins/util/avro/src/lib/graphics/plot.h(13), from /home/jenkins/util/avro/src/lib/graphics/application.h(16), from /home/jenkins/util/avro/src/lib/adaptation/parallel.cpp(21): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/primitive.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/properties.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/smoothing.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/swaps.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/crypto.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/error.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/kdtree.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/nearest_neighbours.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/process_cpu.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/process_gpu.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/process_mpi.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/tools.cpp.o In file included from /home/jenkins/util/avro/src/lib/common/tools.cpp(14): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/basis.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_line.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_pentatope.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_tetrahedron.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_triangle.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/element.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_line.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_nodes.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_pentatope.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_tetrahedron.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_triangle.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_line.cpp.o [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_pentatope.cpp.o [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_tetrahedron.cpp.o [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_triangle.cpp.o [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/polytope.cpp.o [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/quadrature.cpp.o [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/reference.cpp.o [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/simplex.cpp.o [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/trace2cell.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/body.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/entity.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/model.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/tessellation.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/body.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/context.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/data.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/model.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/object.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/psc/facet.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/psc/node.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/psc/object.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/application.cpp.o In file included from /home/jenkins/util/avro/src/lib/graphics/plot.h(13), from /home/jenkins/util/avro/src/lib/graphics/application.h(16), from /home/jenkins/util/avro/src/lib/graphics/application.cpp(11): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/bsp.cpp.o In file included from /home/jenkins/util/avro/src/lib/graphics/plot.h(13), from /home/jenkins/util/avro/src/lib/graphics/bsp.h(18), from /home/jenkins/util/avro/src/lib/graphics/bsp.cpp(10): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/camera.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/colormap.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/gl.cpp.o In file included from /home/jenkins/util/avro/src/lib/graphics/gl.cpp(10): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/gui.cpp.o In file included from /home/jenkins/util/avro/src/lib/graphics/plot.h(13), from /home/jenkins/util/avro/src/lib/graphics/bsp.h(18), from /home/jenkins/util/avro/src/lib/graphics/gui.cpp(10): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/math.cpp.o [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/opengl.cpp.o In file included from /home/jenkins/util/avro/src/lib/graphics/plot.h(13), from /home/jenkins/util/avro/src/lib/graphics/application.h(16), from /home/jenkins/util/avro/src/lib/graphics/opengl.cpp(11): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/plot.cpp.o In file included from /home/jenkins/util/avro/src/lib/graphics/plot.h(13), from /home/jenkins/util/avro/src/lib/graphics/plot.cpp(12): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/postscript.cpp.o In file included from /home/jenkins/util/avro/src/lib/graphics/plot.h(13), from /home/jenkins/util/avro/src/lib/graphics/bsp.h(18), from /home/jenkins/util/avro/src/lib/graphics/postscript.cpp(10): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/primitives.cpp.o In file included from /home/jenkins/util/avro/src/lib/graphics/primitives.h(15), from /home/jenkins/util/avro/src/lib/graphics/primitives.cpp(12): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/raytracer.cpp.o In file included from /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp(12): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/shader.cpp.o In file included from /home/jenkins/util/avro/src/lib/graphics/shader.h(13), from /home/jenkins/util/avro/src/lib/graphics/shader.cpp(12): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/vao.cpp.o In file included from /home/jenkins/util/avro/src/lib/graphics/primitives.h(15), from /home/jenkins/util/avro/src/lib/graphics/vao.cpp(18): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/vao_polytope.cpp.o In file included from /home/jenkins/util/avro/src/lib/graphics/primitives.h(15), from /home/jenkins/util/avro/src/lib/graphics/vao_polytope.cpp(15): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/webglpp.cpp.o In file included from /home/jenkins/util/avro/src/lib/graphics/primitives.h(15), from /home/jenkins/util/avro/src/lib/graphics/webglpp.cpp(10): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/websockets.cpp.o [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/window.cpp.o In file included from /home/jenkins/util/avro/src/lib/graphics/vao.h(15), from /home/jenkins/util/avro/src/lib/graphics/window.cpp(11): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ /home/jenkins/util/avro/src/lib/graphics/window.cpp(265): warning #823: reference is to variable "d" (declared at line 261) -- under old for-init scoping rules it would have been variable "d" (declared at line 263) if (plot_[k]->length_scale() > d) ^ /home/jenkins/util/avro/src/lib/graphics/window.cpp(266): warning #823: reference is to variable "d" (declared at line 261) -- under old for-init scoping rules it would have been variable "d" (declared at line 263) d = plot_[k]->length_scale(); ^ [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/ckf.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/csm.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/egads.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/eps.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/factory.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/field.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/library.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/meshb.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/metric.cpp.o /home/jenkins/util/avro/src/lib/library/metric.h(245): warning #1011: missing return statement at end of non-void function "avro::library::MetricField_UniformGeometry::operator()(const avro::real_t={double} *) const" } ^ [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/obj.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/plots.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/samples.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/spacetime.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/tesseract.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/boundary.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/builder.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/decomposition.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/dof.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/facets.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/field.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/interpolation.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/inverse.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/mesh.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/mpi.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/neighbours.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/partition.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/points.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/search.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/topology.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/topology_polytope.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/topology_simplex.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/functions.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/geometry.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/linear_algebra.cpp.o /home/jenkins/util/avro/src/lib/numerics/linear_algebra.cpp(668): warning #1011: missing return statement at end of non-void function "avro::numerics::det(const avro::symd &) [with type=avro::real_t={double}]" } ^ detected during instantiation of "type avro::numerics::det(const avro::symd &) [with type=avro::real_t={double}]" at line 478 [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/mat.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/sym.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/tools.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/vec.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/orient4d.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side1_exact.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side2_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side3_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side4_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side5_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_10d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_3d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_4d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_5d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_6d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_7d.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_8d.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_9d.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/bowyer_watson.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/cell.cpp.o [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/cell_nd.cpp.o [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/diagram.cpp.o [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/facets.cpp.o [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/optimal_transport.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/particles.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/vertex.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/bin/adapt.cpp.o In file included from /home/jenkins/util/avro/src/lib/graphics/plot.h(13), from /home/jenkins/util/avro/src/lib/graphics/application.h(16), from /home/jenkins/util/avro/src/bin/adapt.cpp(20): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/bin/animate.cpp.o In file included from /home/jenkins/util/avro/src/bin/animate.cpp(6): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/arguments.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/check.cpp.o In file included from /home/jenkins/util/avro/src/lib/graphics/plot.h(13), from /home/jenkins/util/avro/src/lib/graphics/application.h(16), from /home/jenkins/util/avro/src/bin/check.cpp(10): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/conformity.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/conformityp.cpp.o In file included from /home/jenkins/util/avro/src/lib/graphics/plot.h(13), from /home/jenkins/util/avro/src/lib/graphics/application.h(16), from /home/jenkins/util/avro/src/bin/conformityp.cpp(12): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/convert.cpp.o In file included from /home/jenkins/util/avro/src/lib/graphics/plot.h(13), from /home/jenkins/util/avro/src/lib/graphics/application.h(16), from /home/jenkins/util/avro/src/bin/convert.cpp(8): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 94%] Building CXX object src/CMakeFiles/avro_src.dir/bin/image.cpp.o In file included from /home/jenkins/util/avro/src/lib/graphics/plot.h(13), from /home/jenkins/util/avro/src/lib/graphics/application.h(16), from /home/jenkins/util/avro/src/bin/image.cpp(10): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 94%] Building CXX object src/CMakeFiles/avro_src.dir/bin/plot.cpp.o In file included from /home/jenkins/util/avro/src/lib/graphics/plot.h(13), from /home/jenkins/util/avro/src/lib/graphics/application.h(16), from /home/jenkins/util/avro/src/bin/plot.cpp(10): /home/jenkins/util/avro/src/lib/graphics/gl.h(148): warning #1011: missing return statement at end of non-void function "avro::graphics::glGetUniformLocation" inline gl_index glGetUniformLocation( gl_index , const std::string& ) { avro_assert_not_reached; } ^ [ 94%] Built target avro_src Consolidate compiler generated dependencies of target avro_third_party [ 94%] Building CXX object src/third_party/CMakeFiles/avro_third_party.dir/geogram/kd_tree.cpp.o [ 94%] Building CXX object src/third_party/CMakeFiles/avro_third_party.dir/geogram/nn_search.cpp.o [100%] Built target avro_third_party [100%] Linking CXX static library ../lib/libavro.a [100%] Built target avro_static [100%] Linking CXX shared library ../lib/libavro.so [100%] Built target avro_shared [100%] Built target avro_lib make -C analyze_clang --no-print-directory avro_lib -- Build type = debug -- lapack not found -- only supporting WebViewer -- Setting clang compiler flags -- CPU thread manager = c++11. -- GPU threading not enabled. GPU thread manager = serial. -- Please install kcachegrind for graphical profiling. -- Please install massif-visualizer for graphical heap memory usage. -- pybind11 v2.10.0 dev1 -- Configuring done -- Generating done -- Build files have been written to: /home/jenkins/util/avro/build/analyze_clang Consolidate compiler generated dependencies of target avro_src [ 0%] Building CXX object src/CMakeFiles/avro_src.dir/include/avro.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/include/avro_params.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/adapt.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/cavity.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/collapses.cpp.o [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/filter.cpp.o [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/geometry.cpp.o [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/implied_metric.cpp.o [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/insertions.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/metric.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/parallel.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/primitive.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/properties.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/smoothing.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/swaps.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/crypto.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/error.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/kdtree.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/nearest_neighbours.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/process_cpu.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/process_gpu.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/process_mpi.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/tools.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/basis.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_line.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_pentatope.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_tetrahedron.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_triangle.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/element.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_line.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_nodes.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_pentatope.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_tetrahedron.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_triangle.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_line.cpp.o /home/jenkins/util/avro/src/lib/element/legendre_line.cpp:24:10: warning: unused variable 's' [-Wunused-variable] real_t s = x[0]; ^ 1 warning generated. [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_pentatope.cpp.o [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_tetrahedron.cpp.o [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_triangle.cpp.o [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/polytope.cpp.o [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/quadrature.cpp.o In file included from /home/jenkins/util/avro/src/lib/element/quadrature.cpp:14: /home/jenkins/util/avro/src/lib/element/quadrature_cp.h:1065:7: warning: misleading indentation; statement is not part of the previous 'for' [-Wmisleading-indentation] for (int k = 0; k < order; k++) ^ /home/jenkins/util/avro/src/lib/element/quadrature_cp.h:1061:5: note: previous statement is here for (int j = 0; j < nDim; j++) ^ 1 warning generated. [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/reference.cpp.o [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/simplex.cpp.o [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/trace2cell.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/body.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/entity.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/model.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/tessellation.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/body.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/context.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/data.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/model.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/object.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/psc/facet.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/psc/node.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/psc/object.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/application.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/bsp.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/camera.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/colormap.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/gl.cpp.o [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/gui.cpp.o /home/jenkins/util/avro/src/lib/graphics/gui.cpp:71:1: warning: unused function 'convert_to_char' [-Wunused-function] convert_to_char( const std::vector& s ) { ^ 1 warning generated. [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/math.cpp.o [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/opengl.cpp.o /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:475:11: warning: unused variable 'ncolor' [-Wunused-variable] index_t ncolor = 256*3; ^ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:486:26: warning: variable 'colormap_texture' is uninitialized when used here [-Wuninitialized] manager_.track_texture(colormap_texture); ^~~~~~~~~~~~~~~~ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:480:26: note: initialize the variable 'colormap_texture' to silence this warning GLuint colormap_texture; ^ = 0 /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:487:25: warning: variable 'colormap_buffer' is uninitialized when used here [-Wuninitialized] manager_.track_buffer(colormap_buffer); ^~~~~~~~~~~~~~~ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:471:27: note: initialize the variable 'colormap_buffer' to silence this warning gl_index colormap_buffer; ^ = 0 3 warnings generated. [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/plot.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/postscript.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/primitives.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/raytracer.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/shader.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/vao.cpp.o [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/vao_polytope.cpp.o /home/jenkins/util/avro/src/lib/graphics/vao_polytope.cpp:139:13: warning: misleading indentation; statement is not part of the previous 'for' [-Wmisleading-indentation] for (index_t j = 0; j < output.numberofpoints; j++) ^ /home/jenkins/util/avro/src/lib/graphics/vao_polytope.cpp:136:11: note: previous statement is here for (index_t j = 0; j < coordinates_.size()/3; j++) ^ 1 warning generated. [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/webglpp.cpp.o [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/websockets.cpp.o [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/window.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/ckf.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/csm.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/egads.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/eps.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/factory.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/field.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/library.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/meshb.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/metric.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/obj.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/plots.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/samples.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/spacetime.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/tesseract.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/boundary.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/builder.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/decomposition.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/dof.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/facets.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/field.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/interpolation.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/inverse.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/mesh.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/mpi.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/neighbours.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/partition.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/points.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/search.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/topology.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/topology_polytope.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/topology_simplex.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/functions.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/geometry.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/linear_algebra.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/mat.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/sym.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/tools.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/vec.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/orient4d.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side1_exact.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side2_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side3_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side4_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side5_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_10d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_3d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_4d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_5d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_6d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_7d.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_8d.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_9d.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/bowyer_watson.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/cell.cpp.o [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/cell_nd.cpp.o [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/diagram.cpp.o /home/jenkins/util/avro/src/lib/voronoi/diagram.cpp:189:9: warning: misleading indentation; statement is not part of the previous 'for' [-Wmisleading-indentation] add( polytope.data() , polytope.size() ); ^ /home/jenkins/util/avro/src/lib/voronoi/diagram.cpp:187:7: note: previous statement is here for (index_t i = 0; i < polytope.size(); i++) ^ 1 warning generated. [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/facets.cpp.o [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/optimal_transport.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/particles.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/vertex.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/bin/adapt.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/bin/animate.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/arguments.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/check.cpp.o /home/jenkins/util/avro/src/bin/check.cpp:66:19: warning: unused variable 'topology' [-Wunused-variable] Topology& topology = *static_cast*>(ptopology.get()); ^ 1 warning generated. [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/conformity.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/conformityp.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/convert.cpp.o [ 94%] Building CXX object src/CMakeFiles/avro_src.dir/bin/image.cpp.o [ 94%] Building CXX object src/CMakeFiles/avro_src.dir/bin/plot.cpp.o [ 94%] Built target avro_src Consolidate compiler generated dependencies of target avro_third_party [ 94%] Building CXX object src/third_party/CMakeFiles/avro_third_party.dir/geogram/kd_tree.cpp.o [ 94%] Building CXX object src/third_party/CMakeFiles/avro_third_party.dir/geogram/nn_search.cpp.o [100%] Built target avro_third_party [100%] Linking CXX static library ../lib/libavro.a [100%] Built target avro_static [100%] Linking CXX shared library ../lib/libavro.so [100%] Built target avro_shared [100%] Built target avro_lib make -C coverage_gnu9 --no-print-directory avro_lib -- Build type = coverage -- lapack not found -- only supporting WebViewer -- Setting gnu compiler flags -- CPU thread manager = c++11. -- GPU threading not enabled. GPU thread manager = serial. -- Please install kcachegrind for graphical profiling. -- Please install massif-visualizer for graphical heap memory usage. -- pybind11 v2.10.0 dev1 -- Configuring done -- Generating done -- Build files have been written to: /home/jenkins/util/avro/build/coverage_gnu9 Consolidate compiler generated dependencies of target avro_src [ 0%] Building CXX object src/CMakeFiles/avro_src.dir/include/avro.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/include/avro_params.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/adapt.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/cavity.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/collapses.cpp.o [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/filter.cpp.o /home/jenkins/util/avro/src/lib/adaptation/filter.cpp: In member function ‘void avro::Filter::generateCandidates(avro::Topology&, avro::MetricField&, avro::real_t, avro::Insert&)’: /home/jenkins/util/avro/src/lib/adaptation/filter.cpp:139:11: warning: variable ‘TIME0’ set but not used [-Wunused-but-set-variable] 139 | clock_t TIME0, TIME1; | ^~~~~ /home/jenkins/util/avro/src/lib/adaptation/filter.cpp:139:18: warning: variable ‘TIME1’ set but not used [-Wunused-but-set-variable] 139 | clock_t TIME0, TIME1; | ^~~~~ [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/geometry.cpp.o [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/implied_metric.cpp.o /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp: In instantiation of ‘void avro::ElementImpliedMetric::compute(const std::vector&) [with type = avro::Simplex]’: /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:638:16: required from here /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:96:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 96 | J_ = J0_*Jeq_; | ~~~^~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:99:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 99 | M_ = numerics::inverse( JJt ); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp: In instantiation of ‘void avro::ElementImpliedMetric::compute(const avro::Points&, const index_t*, avro::index_t) [with type = avro::Simplex; avro::index_t = long unsigned int]’: /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:638:16: required from here /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:110:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 110 | J_ = J0_*Jeq_; | ~~~^~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:113:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 113 | M_ = numerics::inverse( JJt ); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp: In instantiation of ‘void avro::ElementImpliedMetric::inverse(const avro::Points&, const index_t*, avro::index_t) [with type = avro::Simplex; avro::index_t = long unsigned int]’: /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:638:16: required from here /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:125:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 125 | J_ = J0_*Jeq_; | ~~~^~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:126:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 126 | M_ = J_*numerics::transpose(J_); // no inverse | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/insertions.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/metric.cpp.o /home/jenkins/util/avro/src/lib/adaptation/metric.cpp: In instantiation of ‘avro::real_t avro::MetricField::length(avro::index_t, avro::index_t) const [with type = avro::Simplex; avro::real_t = double; avro::index_t = long unsigned int]’: /home/jenkins/util/avro/src/lib/adaptation/metric.cpp:708:16: required from here /home/jenkins/util/avro/src/lib/adaptation/metric.cpp:146:10: warning: variable ‘dim’ set but not used [-Wunused-but-set-variable] 146 | coord_t dim = topology_.points().dim(); | ^~~ [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/parallel.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/primitive.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/properties.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/smoothing.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/swaps.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/crypto.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/error.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/kdtree.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/nearest_neighbours.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/process_cpu.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/process_gpu.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/process_mpi.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/tools.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/basis.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_line.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_pentatope.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_tetrahedron.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_triangle.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/element.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_line.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_nodes.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_pentatope.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_tetrahedron.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_triangle.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_line.cpp.o /home/jenkins/util/avro/src/lib/element/legendre_line.cpp: In static member function ‘static void avro::Legendre::eval(const double*, double*) [with int N = 1; int P = 0]’: /home/jenkins/util/avro/src/lib/element/legendre_line.cpp:24:10: warning: unused variable ‘s’ [-Wunused-variable] 24 | real_t s = x[0]; | ^ [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_pentatope.cpp.o [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_tetrahedron.cpp.o [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_triangle.cpp.o [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/polytope.cpp.o [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/quadrature.cpp.o /home/jenkins/util/avro/src/lib/element/quadrature.cpp: In instantiation of ‘void avro::QuadratureStore::build() [with type = avro::Simplex]’: /home/jenkins/util/avro/src/lib/element/quadrature.cpp:34:3: required from ‘avro::QuadratureStore::QuadratureStore(avro::BasisFunctionCategory) [with type = avro::Simplex]’ /home/jenkins/util/avro/src/lib/element/quadrature.cpp:22:83: required from here /home/jenkins/util/avro/src/lib/element/quadrature.cpp:89:16: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 89 | B[d] = matd( nb_basis , quad.nb() ); In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/quadrature.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/element/quadrature.cpp:110:16: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 110 | B[d] = Ainv*B[d]; // convert modal basis to nodal basis In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/quadrature.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/reference.cpp.o [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/simplex.cpp.o /home/jenkins/util/avro/src/lib/element/simplex.cpp: In member function ‘void avro::Simplex::precalculate()’: /home/jenkins/util/avro/src/lib/element/simplex.cpp:127:25: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 127 | for (index_t k = 0; k < number_+1; k++) | ~~^~~~~~~~~~~ [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/trace2cell.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/body.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/entity.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/model.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/tessellation.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/body.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/context.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/data.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/model.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/object.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/psc/facet.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/psc/node.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/psc/object.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/application.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/bsp.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/camera.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/colormap.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/gl.cpp.o [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/gui.cpp.o /home/jenkins/util/avro/src/lib/graphics/gui.cpp:71:1: warning: ‘std::vector avro::graphics::convert_to_char(const std::vector >&)’ defined but not used [-Wunused-function] 71 | convert_to_char( const std::vector& s ) { | ^~~~~~~~~~~~~~~ [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/math.cpp.o [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/opengl.cpp.o /home/jenkins/util/avro/src/lib/graphics/opengl.cpp: In member function ‘void avro::graphics::Window::select_colormap(const string&)’: /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:475:11: warning: unused variable ‘ncolor’ [-Wunused-variable] 475 | index_t ncolor = 256*3; | ^~~~~~ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp: In member function ‘void avro::graphics::ClipPlane::write()’: /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:418:28: warning: ‘buffers[0]’ is used uninitialized in this function [-Wuninitialized] 418 | point_buffer_ = buffers[0]; | ~~~~~~~~~^ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:419:28: warning: ‘buffers[1]’ is used uninitialized in this function [-Wuninitialized] 419 | index_buffer_ = buffers[1]; | ~~~~~~~~~^ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp: In member function ‘void avro::graphics::Window::select_colormap(const string&)’: /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:486:25: warning: ‘colormap_texture’ may be used uninitialized in this function [-Wmaybe-uninitialized] 486 | manager_.track_texture(colormap_texture); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:487:24: warning: ‘colormap_buffer’ may be used uninitialized in this function [-Wmaybe-uninitialized] 487 | manager_.track_buffer(colormap_buffer); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/plot.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/postscript.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/primitives.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/raytracer.cpp.o /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp: In member function ‘void avro::graphics::Canvas::convert()’: /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp:97:25: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 97 | for (index_t i = 0; i < height_; i++) | ~~^~~~~~~~~ /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp:98:25: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 98 | for (index_t j = 0; j < width_; j++) | ~~^~~~~~~~ /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp: In member function ‘void avro::graphics::RayTracer::render()’: /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp:435:27: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 435 | for (index_t j = 0; j < canvas_.width(); j++) { | ~~^~~~~~~~~~~~~~~~~ [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/shader.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/vao.cpp.o [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/vao_polytope.cpp.o /home/jenkins/util/avro/src/lib/graphics/vao_polytope.cpp: In member function ‘void avro::graphics::PolytopeDecomposition::triangulate()’: /home/jenkins/util/avro/src/lib/graphics/vao_polytope.cpp:136:11: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 136 | for (index_t j = 0; j < coordinates_.size()/3; j++) | ^~~ /home/jenkins/util/avro/src/lib/graphics/vao_polytope.cpp:139:13: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 139 | for (index_t j = 0; j < output.numberofpoints; j++) | ^~~ /home/jenkins/util/avro/src/lib/graphics/vao_polytope.cpp:139:35: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 139 | for (index_t j = 0; j < output.numberofpoints; j++) | ~~^~~~~~~~~~~~~~~~~~~~~~~ [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/webglpp.cpp.o [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/websockets.cpp.o [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/window.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/ckf.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/csm.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/egads.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/eps.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/factory.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/field.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/library.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/meshb.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/metric.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/obj.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/plots.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/samples.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/spacetime.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/tesseract.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/boundary.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/builder.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/decomposition.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/dof.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/facets.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/field.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/interpolation.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/inverse.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/mesh.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/mpi.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/neighbours.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/partition.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/points.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/search.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/topology.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/topology_polytope.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/topology_simplex.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/functions.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/geometry.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/linear_algebra.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/mat.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/sym.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/tools.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/vec.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/orient4d.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side1_exact.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side2_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side3_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side4_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side5_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_10d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_3d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_4d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_5d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_6d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_7d.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_8d.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_9d.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/bowyer_watson.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/cell.cpp.o [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/cell_nd.cpp.o [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/diagram.cpp.o /home/jenkins/util/avro/src/lib/voronoi/diagram.cpp: In member function ‘void avro::voronoi::PowerDiagram::add_cell(const avro::voronoi::Cell&, bool)’: /home/jenkins/util/avro/src/lib/voronoi/diagram.cpp:187:7: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 187 | for (index_t i = 0; i < polytope.size(); i++) | ^~~ /home/jenkins/util/avro/src/lib/voronoi/diagram.cpp:189:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 189 | add( polytope.data() , polytope.size() ); | ^~~ [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/facets.cpp.o [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/optimal_transport.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/particles.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/vertex.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/bin/adapt.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/bin/animate.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/arguments.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/check.cpp.o /home/jenkins/util/avro/src/bin/check.cpp: In function ‘int avro::programs::check(int, const char**)’: /home/jenkins/util/avro/src/bin/check.cpp:66:19: warning: unused variable ‘topology’ [-Wunused-variable] 66 | Topology& topology = *static_cast*>(ptopology.get()); | ^~~~~~~~ [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/conformity.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/conformityp.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/convert.cpp.o [ 94%] Building CXX object src/CMakeFiles/avro_src.dir/bin/image.cpp.o [ 94%] Building CXX object src/CMakeFiles/avro_src.dir/bin/plot.cpp.o [ 94%] Built target avro_src Consolidate compiler generated dependencies of target avro_third_party [ 94%] Building CXX object src/third_party/CMakeFiles/avro_third_party.dir/geogram/kd_tree.cpp.o [ 94%] Building CXX object src/third_party/CMakeFiles/avro_third_party.dir/geogram/nn_search.cpp.o [100%] Built target avro_third_party [100%] Linking CXX static library ../lib/libavro.a [100%] Built target avro_static [100%] Linking CXX shared library ../lib/libavro.so [100%] Built target avro_shared [100%] Built target avro_lib make -C memcheck_gnu11 --no-print-directory avro_lib -- Build type = memcheck -- lapack not found -- only supporting WebViewer -- Setting gnu compiler flags -- CPU thread manager = c++11. -- GPU threading not enabled. GPU thread manager = serial. -- Please install kcachegrind for graphical profiling. -- Please install massif-visualizer for graphical heap memory usage. -- pybind11 v2.10.0 dev1 -- Configuring done -- Generating done -- Build files have been written to: /home/jenkins/util/avro/build/memcheck_gnu11 Consolidate compiler generated dependencies of target avro_src [ 0%] Building CXX object src/CMakeFiles/avro_src.dir/include/avro.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/include/avro_params.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/adapt.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/cavity.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/collapses.cpp.o [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/filter.cpp.o /home/jenkins/util/avro/src/lib/adaptation/filter.cpp: In member function ‘void avro::Filter::generateCandidates(avro::Topology&, avro::MetricField&, avro::real_t, avro::Insert&)’: /home/jenkins/util/avro/src/lib/adaptation/filter.cpp:139:11: warning: variable ‘TIME0’ set but not used [-Wunused-but-set-variable] 139 | clock_t TIME0, TIME1; | ^~~~~ /home/jenkins/util/avro/src/lib/adaptation/filter.cpp:139:18: warning: variable ‘TIME1’ set but not used [-Wunused-but-set-variable] 139 | clock_t TIME0, TIME1; | ^~~~~ [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/geometry.cpp.o [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/implied_metric.cpp.o /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp: In instantiation of ‘void avro::ElementImpliedMetric::compute(const std::vector&) [with type = avro::Simplex]’: /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:638:16: required from here /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:96:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 96 | J_ = J0_*Jeq_; | ~~~^~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:99:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 99 | M_ = numerics::inverse( JJt ); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp: In instantiation of ‘void avro::ElementImpliedMetric::compute(const avro::Points&, const index_t*, avro::index_t) [with type = avro::Simplex; avro::index_t = long unsigned int]’: /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:638:16: required from here /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:110:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 110 | J_ = J0_*Jeq_; | ~~~^~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:113:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 113 | M_ = numerics::inverse( JJt ); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp: In instantiation of ‘void avro::ElementImpliedMetric::inverse(const avro::Points&, const index_t*, avro::index_t) [with type = avro::Simplex; avro::index_t = long unsigned int]’: /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:638:16: required from here /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:125:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 125 | J_ = J0_*Jeq_; | ~~~^~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:126:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 126 | M_ = J_*numerics::transpose(J_); // no inverse | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/insertions.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/metric.cpp.o /home/jenkins/util/avro/src/lib/adaptation/metric.cpp: In instantiation of ‘avro::real_t avro::MetricField::length(avro::index_t, avro::index_t) const [with type = avro::Simplex; avro::real_t = double; avro::index_t = long unsigned int]’: /home/jenkins/util/avro/src/lib/adaptation/metric.cpp:708:16: required from here /home/jenkins/util/avro/src/lib/adaptation/metric.cpp:146:10: warning: variable ‘dim’ set but not used [-Wunused-but-set-variable] 146 | coord_t dim = topology_.points().dim(); | ^~~ [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/parallel.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/primitive.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/properties.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/smoothing.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/swaps.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/crypto.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/error.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/kdtree.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/nearest_neighbours.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/process_cpu.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/process_gpu.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/process_mpi.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/tools.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/basis.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_line.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_pentatope.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_tetrahedron.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_triangle.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/element.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_line.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_nodes.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_pentatope.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_tetrahedron.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_triangle.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_line.cpp.o /home/jenkins/util/avro/src/lib/element/legendre_line.cpp: In static member function ‘static void avro::Legendre::eval(const double*, double*) [with int N = 1; int P = 0]’: /home/jenkins/util/avro/src/lib/element/legendre_line.cpp:24:10: warning: unused variable ‘s’ [-Wunused-variable] 24 | real_t s = x[0]; | ^ [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_pentatope.cpp.o [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_tetrahedron.cpp.o [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_triangle.cpp.o [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/polytope.cpp.o [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/quadrature.cpp.o /home/jenkins/util/avro/src/lib/element/quadrature.cpp: In instantiation of ‘void avro::QuadratureStore::build() [with type = avro::Simplex]’: /home/jenkins/util/avro/src/lib/element/quadrature.cpp:34:3: required from ‘avro::QuadratureStore::QuadratureStore(avro::BasisFunctionCategory) [with type = avro::Simplex]’ /home/jenkins/util/avro/src/lib/element/quadrature.cpp:22:83: required from here /home/jenkins/util/avro/src/lib/element/quadrature.cpp:89:16: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 89 | B[d] = matd( nb_basis , quad.nb() ); In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/quadrature.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/element/quadrature.cpp:110:16: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 110 | B[d] = Ainv*B[d]; // convert modal basis to nodal basis In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/quadrature.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/reference.cpp.o [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/simplex.cpp.o /home/jenkins/util/avro/src/lib/element/simplex.cpp: In member function ‘void avro::Simplex::precalculate()’: /home/jenkins/util/avro/src/lib/element/simplex.cpp:127:25: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 127 | for (index_t k = 0; k < number_+1; k++) | ~~^~~~~~~~~~~ [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/trace2cell.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/body.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/entity.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/model.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/tessellation.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/body.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/context.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/data.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/model.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/object.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/psc/facet.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/psc/node.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/psc/object.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/application.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/bsp.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/camera.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/colormap.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/gl.cpp.o [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/gui.cpp.o /home/jenkins/util/avro/src/lib/graphics/gui.cpp:71:1: warning: ‘std::vector avro::graphics::convert_to_char(const std::vector >&)’ defined but not used [-Wunused-function] 71 | convert_to_char( const std::vector& s ) { | ^~~~~~~~~~~~~~~ [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/math.cpp.o [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/opengl.cpp.o /home/jenkins/util/avro/src/lib/graphics/opengl.cpp: In member function ‘void avro::graphics::Window::select_colormap(const string&)’: /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:475:11: warning: unused variable ‘ncolor’ [-Wunused-variable] 475 | index_t ncolor = 256*3; | ^~~~~~ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp: In member function ‘void avro::graphics::ClipPlane::write()’: /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:418:28: warning: ‘buffers[0]’ is used uninitialized in this function [-Wuninitialized] 418 | point_buffer_ = buffers[0]; | ~~~~~~~~~^ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:419:28: warning: ‘buffers[1]’ is used uninitialized in this function [-Wuninitialized] 419 | index_buffer_ = buffers[1]; | ~~~~~~~~~^ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp: In member function ‘void avro::graphics::Window::select_colormap(const string&)’: /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:480:10: warning: ‘colormap_texture’ may be used uninitialized in this function [-Wmaybe-uninitialized] 480 | GLuint colormap_texture; | ^~~~~~~~~~~~~~~~ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:471:12: warning: ‘colormap_buffer’ may be used uninitialized in this function [-Wmaybe-uninitialized] 471 | gl_index colormap_buffer; | ^~~~~~~~~~~~~~~ [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/plot.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/postscript.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/primitives.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/raytracer.cpp.o /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp: In member function ‘void avro::graphics::Canvas::convert()’: /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp:97:25: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 97 | for (index_t i = 0; i < height_; i++) | ~~^~~~~~~~~ /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp:98:25: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 98 | for (index_t j = 0; j < width_; j++) | ~~^~~~~~~~ /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp: In member function ‘void avro::graphics::RayTracer::render()’: /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp:435:27: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 435 | for (index_t j = 0; j < canvas_.width(); j++) { | ~~^~~~~~~~~~~~~~~~~ [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/shader.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/vao.cpp.o [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/vao_polytope.cpp.o /home/jenkins/util/avro/src/lib/graphics/vao_polytope.cpp: In member function ‘void avro::graphics::PolytopeDecomposition::triangulate()’: /home/jenkins/util/avro/src/lib/graphics/vao_polytope.cpp:136:11: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 136 | for (index_t j = 0; j < coordinates_.size()/3; j++) | ^~~ /home/jenkins/util/avro/src/lib/graphics/vao_polytope.cpp:139:13: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 139 | for (index_t j = 0; j < output.numberofpoints; j++) | ^~~ /home/jenkins/util/avro/src/lib/graphics/vao_polytope.cpp:139:35: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 139 | for (index_t j = 0; j < output.numberofpoints; j++) | ~~^~~~~~~~~~~~~~~~~~~~~~~ [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/webglpp.cpp.o [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/websockets.cpp.o [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/window.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/ckf.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/csm.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/egads.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/eps.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/factory.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/field.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/library.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/meshb.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/metric.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/obj.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/plots.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/samples.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/spacetime.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/tesseract.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/boundary.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/builder.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/decomposition.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/dof.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/facets.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/field.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/interpolation.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/inverse.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/mesh.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/mpi.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/neighbours.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/partition.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/points.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/search.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/topology.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/topology_polytope.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/topology_simplex.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/functions.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/geometry.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/linear_algebra.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/mat.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/sym.cpp.o /home/jenkins/util/avro/src/lib/numerics/sym.cpp: In member function ‘avro::symd avro::symd::sandwich(const avro::symd&) const [with type = SurrealS<3>]’: /home/jenkins/util/avro/src/lib/numerics/sym.cpp:94:1: note: variable tracking size limit exceeded with ‘-fvar-tracking-assignments’, retrying without 94 | symd::sandwich( const symd& B ) const { | ^~~~~~~~~~ /home/jenkins/util/avro/src/lib/numerics/sym.cpp: In member function ‘avro::symd avro::symd::sandwich(const avro::symd&) const [with type = SurrealS<6>]’: /home/jenkins/util/avro/src/lib/numerics/sym.cpp:94:1: note: variable tracking size limit exceeded with ‘-fvar-tracking-assignments’, retrying without /home/jenkins/util/avro/src/lib/numerics/sym.cpp: In member function ‘avro::symd avro::symd::sandwich(const avro::symd&) const [with type = SurrealS<10>]’: /home/jenkins/util/avro/src/lib/numerics/sym.cpp:94:1: note: variable tracking size limit exceeded with ‘-fvar-tracking-assignments’, retrying without [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/tools.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/vec.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/orient4d.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side1_exact.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side2_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side3_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side4_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side5_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_10d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_3d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_4d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_5d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_6d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_7d.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_8d.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_9d.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/bowyer_watson.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/cell.cpp.o [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/cell_nd.cpp.o [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/diagram.cpp.o /home/jenkins/util/avro/src/lib/voronoi/diagram.cpp: In member function ‘void avro::voronoi::PowerDiagram::add_cell(const avro::voronoi::Cell&, bool)’: /home/jenkins/util/avro/src/lib/voronoi/diagram.cpp:187:7: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 187 | for (index_t i = 0; i < polytope.size(); i++) | ^~~ /home/jenkins/util/avro/src/lib/voronoi/diagram.cpp:189:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 189 | add( polytope.data() , polytope.size() ); | ^~~ [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/facets.cpp.o [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/optimal_transport.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/particles.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/vertex.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/bin/adapt.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/bin/animate.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/arguments.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/check.cpp.o /home/jenkins/util/avro/src/bin/check.cpp: In function ‘int avro::programs::check(int, const char**)’: /home/jenkins/util/avro/src/bin/check.cpp:66:19: warning: unused variable ‘topology’ [-Wunused-variable] 66 | Topology& topology = *static_cast*>(ptopology.get()); | ^~~~~~~~ [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/conformity.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/conformityp.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/convert.cpp.o [ 94%] Building CXX object src/CMakeFiles/avro_src.dir/bin/image.cpp.o [ 94%] Building CXX object src/CMakeFiles/avro_src.dir/bin/plot.cpp.o [ 94%] Built target avro_src Consolidate compiler generated dependencies of target avro_third_party [ 94%] Building CXX object src/third_party/CMakeFiles/avro_third_party.dir/geogram/kd_tree.cpp.o [ 94%] Building CXX object src/third_party/CMakeFiles/avro_third_party.dir/geogram/nn_search.cpp.o [100%] Built target avro_third_party [100%] Linking CXX static library ../lib/libavro.a [100%] Built target avro_static [100%] Linking CXX shared library ../lib/libavro.so [100%] Built target avro_shared [100%] Built target avro_lib make -C undefined_gnu11 --no-print-directory avro_lib -- Build type = debug -- lapack not found -- only supporting WebViewer -- Setting gnu compiler flags -- CPU thread manager = c++11. -- GPU threading not enabled. GPU thread manager = serial. -- Please install kcachegrind for graphical profiling. -- Please install massif-visualizer for graphical heap memory usage. -- pybind11 v2.10.0 dev1 -- Configuring done -- Generating done -- Build files have been written to: /home/jenkins/util/avro/build/undefined_gnu11 Consolidate compiler generated dependencies of target avro_src [ 0%] Building CXX object src/CMakeFiles/avro_src.dir/include/avro.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/include/avro_params.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/adapt.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/cavity.cpp.o [ 2%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/collapses.cpp.o [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/filter.cpp.o /home/jenkins/util/avro/src/lib/adaptation/filter.cpp: In member function ‘void avro::Filter::generateCandidates(avro::Topology&, avro::MetricField&, avro::real_t, avro::Insert&)’: /home/jenkins/util/avro/src/lib/adaptation/filter.cpp:139:11: warning: variable ‘TIME0’ set but not used [-Wunused-but-set-variable] 139 | clock_t TIME0, TIME1; | ^~~~~ /home/jenkins/util/avro/src/lib/adaptation/filter.cpp:139:18: warning: variable ‘TIME1’ set but not used [-Wunused-but-set-variable] 139 | clock_t TIME0, TIME1; | ^~~~~ [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/geometry.cpp.o [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/implied_metric.cpp.o /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp: In instantiation of ‘void avro::ElementImpliedMetric::compute(const std::vector&) [with type = avro::Simplex]’: /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:638:16: required from here /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:96:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 96 | J_ = J0_*Jeq_; | ~~~^~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:99:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 99 | M_ = numerics::inverse( JJt ); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp: In instantiation of ‘void avro::ElementImpliedMetric::compute(const avro::Points&, const index_t*, avro::index_t) [with type = avro::Simplex; avro::index_t = long unsigned int]’: /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:638:16: required from here /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:110:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 110 | J_ = J0_*Jeq_; | ~~~^~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:113:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 113 | M_ = numerics::inverse( JJt ); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp: In instantiation of ‘void avro::ElementImpliedMetric::inverse(const avro::Points&, const index_t*, avro::index_t) [with type = avro::Simplex; avro::index_t = long unsigned int]’: /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:638:16: required from here /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:125:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 125 | J_ = J0_*Jeq_; | ~~~^~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:126:6: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 126 | M_ = J_*numerics::transpose(J_); // no inverse | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/simplex.h:19, from /home/jenkins/util/avro/src/lib/element/polytope.h:16, from /home/jenkins/util/avro/src/lib/mesh/field.h:18, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.h:16, from /home/jenkins/util/avro/src/lib/adaptation/implied_metric.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ [ 5%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/insertions.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/metric.cpp.o /home/jenkins/util/avro/src/lib/adaptation/metric.cpp: In instantiation of ‘avro::real_t avro::MetricField::length(avro::index_t, avro::index_t) const [with type = avro::Simplex; avro::real_t = double; avro::index_t = long unsigned int]’: /home/jenkins/util/avro/src/lib/adaptation/metric.cpp:708:16: required from here /home/jenkins/util/avro/src/lib/adaptation/metric.cpp:146:10: warning: variable ‘dim’ set but not used [-Wunused-but-set-variable] 146 | coord_t dim = topology_.points().dim(); | ^~~ [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/parallel.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/primitive.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/properties.cpp.o [ 8%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/smoothing.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/adaptation/swaps.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/crypto.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/error.cpp.o [ 11%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/kdtree.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/nearest_neighbours.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/process_cpu.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/process_gpu.cpp.o [ 13%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/process_mpi.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/common/tools.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/basis.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_line.cpp.o [ 16%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_pentatope.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_tetrahedron.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/bernstein_triangle.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/element.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_line.cpp.o [ 19%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_nodes.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_pentatope.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_tetrahedron.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/lagrange_triangle.cpp.o [ 22%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_line.cpp.o /home/jenkins/util/avro/src/lib/element/legendre_line.cpp: In static member function ‘static void avro::Legendre::eval(const double*, double*) [with int N = 1; int P = 0]’: /home/jenkins/util/avro/src/lib/element/legendre_line.cpp:24:10: warning: unused variable ‘s’ [-Wunused-variable] 24 | real_t s = x[0]; | ^ [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_pentatope.cpp.o [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_tetrahedron.cpp.o [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/legendre_triangle.cpp.o [ 25%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/polytope.cpp.o [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/quadrature.cpp.o /home/jenkins/util/avro/src/lib/element/quadrature.cpp: In instantiation of ‘void avro::QuadratureStore::build() [with type = avro::Simplex]’: /home/jenkins/util/avro/src/lib/element/quadrature.cpp:34:3: required from ‘avro::QuadratureStore::QuadratureStore(avro::BasisFunctionCategory) [with type = avro::Simplex]’ /home/jenkins/util/avro/src/lib/element/quadrature.cpp:22:83: required from here /home/jenkins/util/avro/src/lib/element/quadrature.cpp:89:16: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 89 | B[d] = matd( nb_basis , quad.nb() ); In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/quadrature.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ /home/jenkins/util/avro/src/lib/element/quadrature.cpp:110:16: warning: implicitly-declared ‘avro::matd& avro::matd::operator=(const avro::matd&)’ is deprecated [-Wdeprecated-copy] 110 | B[d] = Ainv*B[d]; // convert modal basis to nodal basis In file included from /home/jenkins/util/avro/src/lib/element/quadrature.h:16, from /home/jenkins/util/avro/src/lib/element/quadrature.cpp:10: /home/jenkins/util/avro/src/lib/numerics/mat.h:47:3: note: because ‘avro::matd’ has user-provided ‘avro::matd::matd(const avro::matd&) [with T = double]’ 47 | matd(const matd& A) : | ^~~~ [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/reference.cpp.o [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/simplex.cpp.o /home/jenkins/util/avro/src/lib/element/simplex.cpp: In member function ‘void avro::Simplex::precalculate()’: /home/jenkins/util/avro/src/lib/element/simplex.cpp:127:25: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 127 | for (index_t k = 0; k < number_+1; k++) | ~~^~~~~~~~~~~ [ 27%] Building CXX object src/CMakeFiles/avro_src.dir/lib/element/trace2cell.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/body.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/entity.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/model.cpp.o [ 30%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/tessellation.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/body.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/context.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/data.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/model.cpp.o [ 33%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/egads/object.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/psc/facet.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/psc/node.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/geometry/psc/object.cpp.o [ 36%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/application.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/bsp.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/camera.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/colormap.cpp.o [ 38%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/gl.cpp.o [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/gui.cpp.o /home/jenkins/util/avro/src/lib/graphics/gui.cpp:71:1: warning: ‘std::vector avro::graphics::convert_to_char(const std::vector >&)’ defined but not used [-Wunused-function] 71 | convert_to_char( const std::vector& s ) { | ^~~~~~~~~~~~~~~ [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/math.cpp.o [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/opengl.cpp.o /home/jenkins/util/avro/src/lib/graphics/opengl.cpp: In member function ‘void avro::graphics::Window::select_colormap(const string&)’: /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:475:11: warning: unused variable ‘ncolor’ [-Wunused-variable] 475 | index_t ncolor = 256*3; | ^~~~~~ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp: In member function ‘void avro::graphics::ClipPlane::write()’: /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:418:28: warning: ‘buffers[0]’ is used uninitialized in this function [-Wuninitialized] 418 | point_buffer_ = buffers[0]; | ~~~~~~~~~^ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:419:28: warning: ‘buffers[1]’ is used uninitialized in this function [-Wuninitialized] 419 | index_buffer_ = buffers[1]; | ~~~~~~~~~^ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp: In member function ‘void avro::graphics::Window::select_colormap(const string&)’: /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:486:25: warning: ‘colormap_texture’ may be used uninitialized in this function [-Wmaybe-uninitialized] 486 | manager_.track_texture(colormap_texture); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /home/jenkins/util/avro/src/lib/graphics/opengl.cpp:487:24: warning: ‘colormap_buffer’ may be used uninitialized in this function [-Wmaybe-uninitialized] 487 | manager_.track_buffer(colormap_buffer); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 41%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/plot.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/postscript.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/primitives.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/raytracer.cpp.o /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp: In member function ‘void avro::graphics::Canvas::convert()’: /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp:97:25: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 97 | for (index_t i = 0; i < height_; i++) | ~~^~~~~~~~~ /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp:98:25: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 98 | for (index_t j = 0; j < width_; j++) | ~~^~~~~~~~ /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp: In member function ‘void avro::graphics::RayTracer::render()’: /home/jenkins/util/avro/src/lib/graphics/raytracer.cpp:435:27: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 435 | for (index_t j = 0; j < canvas_.width(); j++) { | ~~^~~~~~~~~~~~~~~~~ [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/shader.cpp.o [ 44%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/vao.cpp.o [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/vao_polytope.cpp.o /home/jenkins/util/avro/src/lib/graphics/vao_polytope.cpp: In member function ‘void avro::graphics::PolytopeDecomposition::triangulate()’: /home/jenkins/util/avro/src/lib/graphics/vao_polytope.cpp:136:11: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 136 | for (index_t j = 0; j < coordinates_.size()/3; j++) | ^~~ /home/jenkins/util/avro/src/lib/graphics/vao_polytope.cpp:139:13: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 139 | for (index_t j = 0; j < output.numberofpoints; j++) | ^~~ /home/jenkins/util/avro/src/lib/graphics/vao_polytope.cpp:139:35: warning: comparison of integer expressions of different signedness: ‘avro::index_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 139 | for (index_t j = 0; j < output.numberofpoints; j++) | ~~^~~~~~~~~~~~~~~~~~~~~~~ [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/webglpp.cpp.o [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/websockets.cpp.o [ 47%] Building CXX object src/CMakeFiles/avro_src.dir/lib/graphics/window.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/ckf.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/csm.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/egads.cpp.o [ 50%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/eps.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/factory.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/field.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/library.cpp.o [ 52%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/meshb.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/metric.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/obj.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/plots.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/samples.cpp.o [ 55%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/spacetime.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/library/tesseract.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/boundary.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/builder.cpp.o [ 58%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/decomposition.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/dof.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/facets.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/field.cpp.o [ 61%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/interpolation.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/inverse.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/mesh.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/mpi.cpp.o [ 63%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/neighbours.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/partition.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/points.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/search.cpp.o [ 66%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/topology.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/topology_polytope.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/mesh/topology_simplex.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/functions.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/geometry.cpp.o [ 69%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/linear_algebra.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/mat.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/sym.cpp.o [ 72%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/tools.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/vec.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/orient4d.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side1_exact.cpp.o [ 75%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side2_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side3_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side4_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side5_exact.cpp.o [ 77%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_10d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_3d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_4d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_5d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_6d.cpp.o [ 80%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_7d.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_8d.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/numerics/predicates/side_filters_9d.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/bowyer_watson.cpp.o [ 83%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/cell.cpp.o [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/cell_nd.cpp.o [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/diagram.cpp.o /home/jenkins/util/avro/src/lib/voronoi/diagram.cpp: In member function ‘void avro::voronoi::PowerDiagram::add_cell(const avro::voronoi::Cell&, bool)’: /home/jenkins/util/avro/src/lib/voronoi/diagram.cpp:187:7: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 187 | for (index_t i = 0; i < polytope.size(); i++) | ^~~ /home/jenkins/util/avro/src/lib/voronoi/diagram.cpp:189:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 189 | add( polytope.data() , polytope.size() ); | ^~~ [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/facets.cpp.o [ 86%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/optimal_transport.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/particles.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/lib/voronoi/vertex.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/bin/adapt.cpp.o [ 88%] Building CXX object src/CMakeFiles/avro_src.dir/bin/animate.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/arguments.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/check.cpp.o /home/jenkins/util/avro/src/bin/check.cpp: In function ‘int avro::programs::check(int, const char**)’: /home/jenkins/util/avro/src/bin/check.cpp:66:19: warning: unused variable ‘topology’ [-Wunused-variable] 66 | Topology& topology = *static_cast*>(ptopology.get()); | ^~~~~~~~ [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/conformity.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/conformityp.cpp.o [ 91%] Building CXX object src/CMakeFiles/avro_src.dir/bin/convert.cpp.o [ 94%] Building CXX object src/CMakeFiles/avro_src.dir/bin/image.cpp.o [ 94%] Building CXX object src/CMakeFiles/avro_src.dir/bin/plot.cpp.o [ 94%] Built target avro_src Consolidate compiler generated dependencies of target avro_third_party [ 94%] Building CXX object src/third_party/CMakeFiles/avro_third_party.dir/geogram/kd_tree.cpp.o [ 94%] Building CXX object src/third_party/CMakeFiles/avro_third_party.dir/geogram/nn_search.cpp.o [100%] Built target avro_third_party [100%] Linking CXX static library ../lib/libavro.a [100%] Built target avro_static [100%] Linking CXX shared library ../lib/libavro.so [100%] Built target avro_shared [100%] Built target avro_lib [Static Analysis] Reference build recorder is not configured [Static Analysis] Obtaining reference build from same job (SANS_avro) [Static Analysis] Using reference build 'SANS_avro #65' to compute new, fixed, and outstanding issues [Static Analysis] Issues delta (vs. reference build): outstanding: 0, new: 0, fixed: 0 [Static Analysis] Evaluating quality gates [Static Analysis] -> PASSED - Total (any severity): 0 - Quality QualityGate: 1 [Static Analysis] -> All quality gates have been passed [Static Analysis] Health report is disabled - skipping [Static Analysis] Created analysis result for 0 issues (found 0 new issues, fixed 0 issues) [Static Analysis] Attaching ResultAction with ID 'analysis' to build 'SANS_avro #66'. [Checks API] No suitable checks publisher found. Finished: SUCCESS