https://acdl.mit.edu/csi/job/SANS_avro/builddir=release_clang,buildnode=reynolds/release_clang,reynoldsSANS_avro » release_clang,reynoldsSANS_avro/builddir=release_clang,buildnode=reynoldsbuilddir=release_clang,buildnode=reynoldshttps://acdl.mit.edu/csi/job/SANS_avro/builddir=release_clang,buildnode=reynolds/trueStarted by upstream project "SANS_avro" build number 7373SANS_avrojob/SANS_avro/73a514fe3ef59a7252e00cbf0801a65155e9785a95a514fe3ef59a7252e00cbf0801a65155e9785a95acdl/developa514fe3ef59a7252e00cbf0801a65155e9785a95a514fe3ef59a7252e00cbf0801a65155e9785a95acdl/developa514fe3ef59a7252e00cbf0801a65155e9785a95a514fe3ef59a7252e00cbf0801a65155e9785a95acdl/developssh://jenkins@acdl.mit.edu/home/svnroot/SANSproto/false#73322944760752SANS_avro » release_clang,reynolds #7373falsefalse73261849SUCCESS1654142684671https://acdl.mit.edu/csi/job/SANS_avro/builddir=release_clang,buildnode=reynolds/73/reynoldsgitStarted by upstream project "SANS_avro" build number 7272SANS_avrojob/SANS_avro/72a514fe3ef59a7252e00cbf0801a65155e9785a95a514fe3ef59a7252e00cbf0801a65155e9785a95acdl/developa514fe3ef59a7252e00cbf0801a65155e9785a95a514fe3ef59a7252e00cbf0801a65155e9785a95acdl/developa514fe3ef59a7252e00cbf0801a65155e9785a95a514fe3ef59a7252e00cbf0801a65155e9785a95acdl/developssh://jenkins@acdl.mit.edu/home/svnroot/SANSproto/false#721635851760752SANS_avro » release_clang,reynolds #7272falsefalse72261774SUCCESS1654139661506https://acdl.mit.edu/csi/job/SANS_avro/builddir=release_clang,buildnode=reynolds/72/reynoldssrc/Meshing/avro/XField_avro_2D.cppsrc/Meshing/avro/XField_avro.hsrc/Meshing/avro/XField_avro_3D.cppsrc/Meshing/avro/XField_avro_4D.cppceab109b00d22cb92775477212fed69cbe9b4c5e1643854656000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.eduremoved reference (&) for meshing parameter vector 2022-02-02 18:17:36 -0800ceab109b00d22cb92775477212fed69cbe9b4c5eremoved reference (&) for meshing parameter vectoreditsrc/Meshing/avro/XField_avro_2D.cppeditsrc/Meshing/avro/XField_avro_4D.cppeditsrc/Meshing/avro/XField_avro_3D.cppeditsrc/Meshing/avro/XField_avro.hsrc/pde/IncompressibleNS/OutputIncompressibleNavierStokes1DChannel.h1c2627d0bebddcddb364cfdf7b3f2500f96312bf1643906690000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.eduadded velocity integral output 2022-02-03 08:44:50 -08001c2627d0bebddcddb364cfdf7b3f2500f96312bfadded velocity integral outputeditsrc/pde/IncompressibleNS/OutputIncompressibleNavierStokes1DChannel.hsrc/pde/NS/PDEEulermitAVDiffusion3D.hsrc/pde/NS/BCEulermitAVSensor2D.h5da0616ea9471db42a3b4873e5efaeeb08f20e071644020148000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.edutemplate parameter modification for grid-Laplacian and minor edits 2022-02-04 16:15:48 -08005da0616ea9471db42a3b4873e5efaeeb08f20e07template parameter modification for grid-Laplacian and minor editseditsrc/pde/NS/BCEulermitAVSensor2D.heditsrc/pde/NS/PDEEulermitAVDiffusion3D.hsrc/pde/sansBOOM/AtmosphereStandard.htest/unit/pde/sansBOOM/AtmosphereStandard_btest.cppbde1e1ea58181af7468b0c78c86d1143e1df00751644361827000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.edunegated lapse rates for standard atmosphere -- now definition consistent with official data (Sriram's coded had them negated); added addtional bounds checks 2022-02-08 15:10:27 -0800bde1e1ea58181af7468b0c78c86d1143e1df0075negated lapse rates for standard atmosphere -- now definition consistent with official dataeditsrc/pde/sansBOOM/AtmosphereStandard.hedittest/unit/pde/sansBOOM/AtmosphereStandard_btest.cppsrc/pde/NS/Q3DPrimitiveRhoPressure.htest/unit/pde/NS/Q2DPrimitiveRhoTemperature_btest.cpptest/unit/pde/NS/Q2DPrimitiveRhoPressure_btest.cpptest/unit/pde/NS/Q3DPrimitiveRhoPressure_btest.cpptest/unit/pde/NS/Q3DPrimitiveRhoTemperature_btest.cppsrc/pde/NS/Q2DPrimitiveRhoTemperature.hsrc/pde/NS/Q3DPrimitiveRhoTemperature.he5bf0be0523bafeb85373db53bceb0133e53e5e51644381202000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.edumake NS solution interpreters more consistent between rho-p and rho-T 2022-02-08 20:33:22 -0800e5bf0be0523bafeb85373db53bceb0133e53e5e5make NS solution interpreters more consistent between rho-p and rho-Tedittest/unit/pde/NS/Q3DPrimitiveRhoTemperature_btest.cppeditsrc/pde/NS/Q2DPrimitiveRhoTemperature.heditsrc/pde/NS/Q3DPrimitiveRhoTemperature.hedittest/unit/pde/NS/Q2DPrimitiveRhoPressure_btest.cppedittest/unit/pde/NS/Q3DPrimitiveRhoPressure_btest.cppedittest/unit/pde/NS/Q2DPrimitiveRhoTemperature_btest.cppeditsrc/pde/NS/Q3DPrimitiveRhoPressure.hsrc/pde/NS/SolutionFunction_NavierStokes2D.hsrc/pde/NS/SolutionFunction_NavierStokes2D.cpptest/unit/pde/NS/NavierStokesSolutionFunction2D_btest.cppc842181bbf1d955969d2a9969c6e11aadce811741644425326000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.eduadded ORNL MMS function 2022-02-09 08:48:46 -0800c842181bbf1d955969d2a9969c6e11aadce81174added ORNL MMS functioneditsrc/pde/NS/SolutionFunction_NavierStokes2D.cppedittest/unit/pde/NS/NavierStokesSolutionFunction2D_btest.cppeditsrc/pde/NS/SolutionFunction_NavierStokes2D.hsrc/pde/sansBOOM/AtmosphereStandard.h4dd67148abbc2753ece45bab2bb684f097bcbdc91644538193000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.edufixed bug in std::vector initialization for standard atmosphere class 2022-02-10 16:09:53 -08004dd67148abbc2753ece45bab2bb684f097bcbdc9fixed bug in std::vector initialization for standard atmosphere classeditsrc/pde/sansBOOM/AtmosphereStandard.hsrc/pde/sansBOOM/AtmosphereStandard.hsrc/pde/sansBOOM/RayPath.htest/unit/pde/sansBOOM/AtmosphereStandard_btest.cpptest/unit/pde/sansBOOM/RayPath_btest.cpp3c3206dfec46a5fc3fbcefe49eb71f87ba90c9621644628508000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.edu1st pass at exact ray path for sansBOOM 2022-02-11 17:15:08 -08003c3206dfec46a5fc3fbcefe49eb71f87ba90c9621st pass at exact ray path for sansBOOMedittest/unit/pde/sansBOOM/AtmosphereStandard_btest.cppeditsrc/pde/sansBOOM/AtmosphereStandard.haddsrc/pde/sansBOOM/RayPath.haddtest/unit/pde/sansBOOM/RayPath_btest.cppsrc/Discretization/Galerkin/Stabilization_Galerkin.htest/unit/Discretization/Galerkin/StabilizationMatrix_NS_btest.cpp50c48a01f04ea276e9613df4fc85676bd9a0a9981647374386000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.eduSUPG/GLS/VMS tau code clean-up; added unit tests for P2 and P3 2022-03-15 12:59:46 -070050c48a01f04ea276e9613df4fc85676bd9a0a998SUPG/GLS/VMS tau code clean-up; added unit tests for P2 and P3editsrc/Discretization/Galerkin/Stabilization_Galerkin.hedittest/unit/Discretization/Galerkin/StabilizationMatrix_NS_btest.cppsrc/pde/AdvectionDiffusion/AdvectiveFlux2D.hsrc/pde/AdvectionDiffusion/BCAdvectionDiffusion2D.cpptest/unit/IO/pde/PDEAdvectionDiffusion2D_AdvectiveFlux2D_pattern.txtsrc/pde/AdvectionDiffusion/ViscousFlux2D.hsrc/pde/AdvectionDiffusion/ViscousFlux2D.cpptest/unit/IO/pde/PDEAdvectionDiffusion2D_ViscousFlux2D_pattern.txttest/unit/pde/AdvectionDiffusion/ViscousFlux2D_btest.cpptest/unit/pde/AdvectionDiffusion/AdvectiveFlux2D_btest.cpp3890c7965d4b65c3d376f85ee33f370341fe9e6c1647622392000https://acdl.mit.edu/csi/user/cwomackcwomackcwomack@mit.eduAdded Axisymmetric flux functions + unit tests 2022-03-18 12:53:12 -04003890c7965d4b65c3d376f85ee33f370341fe9e6cAdded Axisymmetric flux functions + unit testsedittest/unit/pde/AdvectionDiffusion/AdvectiveFlux2D_btest.cppedittest/unit/IO/pde/PDEAdvectionDiffusion2D_AdvectiveFlux2D_pattern.txteditsrc/pde/AdvectionDiffusion/ViscousFlux2D.cppeditsrc/pde/AdvectionDiffusion/AdvectiveFlux2D.hedittest/unit/IO/pde/PDEAdvectionDiffusion2D_ViscousFlux2D_pattern.txtedittest/unit/pde/AdvectionDiffusion/ViscousFlux2D_btest.cppeditsrc/pde/AdvectionDiffusion/BCAdvectionDiffusion2D.cppeditsrc/pde/AdvectionDiffusion/ViscousFlux2D.hsrc/pde/IncompressibleNS/PDEIncompressibleRANSSA1DChannel.h63a580a6399c04a87a843db5261254c628b9f66b1647905595000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.edumodified ODE definition for high-Re version of SA for incompressible RANS 2022-03-21 16:33:15 -070063a580a6399c04a87a843db5261254c628b9f66bmodified ODE definition for high-Re version of SA for incompressible RANSeditsrc/pde/IncompressibleNS/PDEIncompressibleRANSSA1DChannel.hsrc/pde/ArtificialViscosity/AVSensor_ViscousFlux2D.h466f89c0dfa8798675da36d012ffb00e79b17c421648224135000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.edumoved typedef HType to eliminate un-used typedef warning when USE_GRID_LAPLACIAN turned on 2022-03-25 09:02:15 -0700466f89c0dfa8798675da36d012ffb00e79b17c42moved typedef HType to eliminate un-used typedef warning when USE_GRID_LAPLACIAN turned oneditsrc/pde/ArtificialViscosity/AVSensor_ViscousFlux2D.hsrc/UserInterfaces/BodyForceSolver_impl.hsrc/Meshing/EGADS/RotorSource/QuadCamber.cppsrc/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.hsrc/pde/NS/OutputEuler3D.hsrc/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.cpp1c67c1f613d6233082eb7ebad8e748faf12eb9cd1649032687000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduAdd CompressiblePower calculation 2022-04-03 20:38:07 -04001c67c1f613d6233082eb7ebad8e748faf12eb9cdAdd CompressiblePower calculationeditsrc/pde/NS/OutputEuler3D.heditsrc/UserInterfaces/BodyForceSolver_impl.heditsrc/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.cppeditsrc/Meshing/EGADS/RotorSource/QuadCamber.cppeditsrc/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.hsrc/pde/ArtificialViscosity/AVSensor_Source2D.htest/unit/pde/NS/PDERANSSA2D_btest.cppsrc/pde/ArtificialViscosity/PDEmitAVSensorInner2D.htest/sandbox/Adapt3D_VMSDBR2_RANSSA_DPW_AV_HTC_toy.cpptest/unit/pde/ArtificialViscosity/AVSensor_Source3D_Euler_btest.cpptest/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_NavierStokes_Consistency_btest.cpptest/system/IO/ErrorOrder/ErrorOrder_2D_VMSDBR2_Triangle_AD_MinTest.txttest/system/IO/ErrorOrder/ErrorOrder_2D_VMSDBR2_Triangle_AD_FullTest.txtsrc/pde/NS/PDERANSSA2D.hsrc/Field/output_Tecplot_VMSDBR2_Boundary_Flux.hsrc/pde/ArtificialViscosity/AVSensor_Source3D.hsrc/ErrorEstimate/VMSD/ErrorEstimateBase_VMSD.cppsrc/pde/NS/PDEmitAVDiffusionOuter2D.hsrc/pde/NS/PDEEulermitAVDiffusion2D.hsrc/pde/NS/PDEEulermitAVDiffusion3D.htest/unit/pde/ArtificialViscosity/AVSensor_Source2D_Euler_btest.cpptest/system/CodeConsistency/PDEmitAVDiffusionOuter2D_Consistency_afield_btest.cpptest/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_Consistency_btest.cppsrc/ErrorEstimate/VMSD/ErrorEstimate_VMSD_BR2.htest/unit/pde/NS/PDEEuler3D_btest.cpptest/sandbox/Solve2D_VMSDBR2_HOW5_VI2_Surface_AV_HTC_toy.cpptest/system/Asymptotic/ErrorOrder_2D_VMSDBR2_Triangle_AD_btest.cppsrc/pde/NS/PDEEuler3D.hsrc/Adaptation/MOESS/SolverInterface_VMSD_BR2.h955201a33fe0b19b1c341d51d29827f4bef2c6aa1649053111000https://acdl.mit.edu/csi/user/blscblscblsc@mit.eduAdditional unit tests for new sensor with RANS. Found and fixed a few bugs in PDERANSSA2D and PDEEuler3D. Cleaned up solver interface for VMSD-BR2 somewhat. More unit tests and tidy up to come. 2022-04-04 02:18:31 -0400955201a33fe0b19b1c341d51d29827f4bef2c6aaAdditional unit tests for new sensor with RANS. Found and fixed a few bugs in PDERANSSA2D and PDEEuler3D. Cleaned up solver interface for VMSD-BR2 somewhat. More unit tests and tidy up to come.editsrc/pde/ArtificialViscosity/AVSensor_Source2D.hedittest/unit/pde/NS/PDEEuler3D_btest.cppedittest/unit/pde/NS/PDERANSSA2D_btest.cppeditsrc/pde/ArtificialViscosity/AVSensor_Source3D.heditsrc/pde/ArtificialViscosity/PDEmitAVSensorInner2D.haddtest/system/CodeConsistency/PDEmitAVDiffusionOuter2D_Consistency_afield_btest.cppeditsrc/pde/NS/PDEEuler3D.hedittest/sandbox/Adapt3D_VMSDBR2_RANSSA_DPW_AV_HTC_toy.cppeditsrc/pde/NS/PDERANSSA2D.haddtest/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_NavierStokes_Consistency_btest.cppedittest/unit/pde/ArtificialViscosity/AVSensor_Source3D_Euler_btest.cppaddtest/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_Consistency_btest.cppeditsrc/pde/NS/PDEEulermitAVDiffusion2D.heditsrc/pde/NS/PDEmitAVDiffusionOuter2D.heditsrc/Adaptation/MOESS/SolverInterface_VMSD_BR2.heditsrc/ErrorEstimate/VMSD/ErrorEstimateBase_VMSD.cppaddsrc/Field/output_Tecplot_VMSDBR2_Boundary_Flux.heditsrc/pde/NS/PDEEulermitAVDiffusion3D.haddtest/system/IO/ErrorOrder/ErrorOrder_2D_VMSDBR2_Triangle_AD_MinTest.txtaddtest/system/IO/ErrorOrder/ErrorOrder_2D_VMSDBR2_Triangle_AD_FullTest.txtedittest/unit/pde/ArtificialViscosity/AVSensor_Source2D_Euler_btest.cppeditsrc/ErrorEstimate/VMSD/ErrorEstimate_VMSD_BR2.hedittest/sandbox/Solve2D_VMSDBR2_HOW5_VI2_Surface_AV_HTC_toy.cppaddtest/system/Asymptotic/ErrorOrder_2D_VMSDBR2_Triangle_AD_btest.cpptest/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cppsrc/Field/output_Tecplot/output_Tecplot_RotorSource.cpptest/unit/pde/NS/PDEEuler3D_RotorSource_btest.cpptest/unit/pde/NS/PDEEulermitAVDiffusion3D_RotorSource_btest.cppsrc/Meshing/EGADS/RotorSource/Rotor.hsrc/UserInterfaces/BodyForceSolver_impl.hsrc/pde/NS/PDEEuler3D_RotorSource.hsrc/Meshing/EGADS/RotorSource/Rotor.cpp82179e765ca7f69b2079784bd4ffde0764b5c8151649092516000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduAdd another quadratic viscous term to Body Force model 2022-04-04 13:15:16 -040082179e765ca7f69b2079784bd4ffde0764b5c815Add another quadratic viscous term to Body Force modeleditsrc/Meshing/EGADS/RotorSource/Rotor.hedittest/unit/pde/NS/PDEEulermitAVDiffusion3D_RotorSource_btest.cppeditsrc/UserInterfaces/BodyForceSolver_impl.heditsrc/pde/NS/PDEEuler3D_RotorSource.hedittest/unit/pde/NS/PDEEuler3D_RotorSource_btest.cppeditsrc/Meshing/EGADS/RotorSource/Rotor.cppeditsrc/Field/output_Tecplot/output_Tecplot_RotorSource.cppedittest/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cpptest/system/CodeConsistency/PDEmitAVSensor2D_Consistency_btest.cpptest/system/CodeConsistency/PDEmitAVDiffusionOuter2D_Consistency_btest.cppsrc/pde/NS/PDEmitAVDiffusionOuter2D.hsrc/pde/NS/PDEEulermitAVDiffusion2D.hsrc/pde/NS/PDEEulermitAVDiffusion1D.hsrc/Field/output_Tecplot_VMSDBR2_Boundary_Flux.h4dd79ab68c5616cfd4eb8c080acb77ce963a67681649098455000https://acdl.mit.edu/csi/user/blscblscblsc@mit.eduUpdated surface flux writer for tecplot (VMSDBR2 specific). Added developer exceptions in to the Euler with artificial diffusion space-time calls since they're not unit tested. 2022-04-04 14:54:15 -04004dd79ab68c5616cfd4eb8c080acb77ce963a6768Updated surface flux writer for tecplot (VMSDBR2 specific). Added developer exceptions in to the Euler with artificial diffusion space-time calls since they're not unit tested.editsrc/pde/NS/PDEEulermitAVDiffusion1D.heditsrc/pde/NS/PDEEulermitAVDiffusion2D.heditsrc/pde/NS/PDEmitAVDiffusionOuter2D.heditsrc/Field/output_Tecplot_VMSDBR2_Boundary_Flux.hedittest/system/CodeConsistency/PDEmitAVDiffusionOuter2D_Consistency_btest.cppedittest/system/CodeConsistency/PDEmitAVSensor2D_Consistency_btest.cpptest/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cppsrc/Field/output_Tecplot/output_Tecplot_RotorSource.cpptest/unit/pde/NS/PDEEuler3D_RotorSource_btest.cpptest/unit/pde/NS/PDEEulermitAVDiffusion3D_RotorSource_btest.cppsrc/Meshing/EGADS/RotorSource/Rotor.hsrc/UserInterfaces/BodyForceSolver_impl.hsrc/pde/NS/PDEEuler3D_RotorSource.hsrc/Meshing/EGADS/RotorSource/Rotor.cpp194e5c8b228bf7b49c14a775deb68db7d48678af1649119726000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduAdd 8th order term to Body Forces 2022-04-04 20:48:46 -0400194e5c8b228bf7b49c14a775deb68db7d48678afAdd 8th order term to Body Forceseditsrc/Meshing/EGADS/RotorSource/Rotor.cppeditsrc/Meshing/EGADS/RotorSource/Rotor.hedittest/unit/pde/NS/PDEEulermitAVDiffusion3D_RotorSource_btest.cppeditsrc/pde/NS/PDEEuler3D_RotorSource.hedittest/unit/pde/NS/PDEEuler3D_RotorSource_btest.cppeditsrc/UserInterfaces/BodyForceSolver_impl.hedittest/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cppeditsrc/Field/output_Tecplot/output_Tecplot_RotorSource.cpptest/unit/pde/NS/PDERANSSA2D_btest.cpptest/system/CodeConsistency/PDEmitAVSensor3D_Consistency_RANSSA_btest.cppsrc/pde/NS/PDERANSSA3D.htest/system/CodeConsistency/PDEmitAVSensor2D_Consistency_btest.cppsrc/SolutionTrek/Continuation/Homotopy/Homotopy.hsrc/pde/NS/PDEmitAVDiffusionOuter2D.hsrc/pde/NS/EulerArtificialViscosityType.htest/unit/pde/NS/PDEEulermitAVDiffusion3D_RANSSA_btest.cppsrc/pde/NS/PDEEulermitAVDiffusion3D.hsrc/pde/NS/PDEEulermitAVDiffusion2D.htest/unit/pde/NS/PDEEulermitAVDiffusion2D_RANSSA_btest.cppsrc/pde/NS/PDEEulermitAVDiffusion1D.hf943c5c5309dfcc8b57068518989530bab50aca41649175482000https://acdl.mit.edu/csi/user/blscblscblsc@mit.eduAdded the ability to specify is artificial diffusion should be applied to SA equation at run time. More unit tests. Caught a few more bugs. 2022-04-05 12:18:02 -0400f943c5c5309dfcc8b57068518989530bab50aca4Added the ability to specify is artificial diffusion should be applied to SA equation at run time. More unit tests. Caught a few more bugs.editsrc/pde/NS/PDEmitAVDiffusionOuter2D.heditsrc/pde/NS/PDEEulermitAVDiffusion3D.hedittest/unit/pde/NS/PDERANSSA2D_btest.cppeditsrc/pde/NS/PDEEulermitAVDiffusion1D.heditsrc/SolutionTrek/Continuation/Homotopy/Homotopy.heditsrc/pde/NS/PDEEulermitAVDiffusion2D.hedittest/system/CodeConsistency/PDEmitAVSensor3D_Consistency_RANSSA_btest.cppedittest/system/CodeConsistency/PDEmitAVSensor2D_Consistency_btest.cppeditsrc/pde/NS/EulerArtificialViscosityType.hedittest/unit/pde/NS/PDEEulermitAVDiffusion2D_RANSSA_btest.cppeditsrc/pde/NS/PDERANSSA3D.hedittest/unit/pde/NS/PDEEulermitAVDiffusion3D_RANSSA_btest.cpptest/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cppsrc/UserInterfaces/BodyForceSolver_impl.hsrc/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.hsrc/pde/NS/OutputEuler3D.h606884e33fe8d629f83e397e69506688402a9c931649209747000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduMore BodyForce output functionals 2022-04-05 21:49:07 -0400606884e33fe8d629f83e397e69506688402a9c93More BodyForce output functionalseditsrc/UserInterfaces/BodyForceSolver_impl.heditsrc/pde/NS/OutputEuler3D.hedittest/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cppeditsrc/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.hscripts/vera/exclusions.txtc05d3e128d32dfba1d060b2d9c36e36c2e1749481649210057000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduAdd vera exclusions 2022-04-05 21:54:17 -0400c05d3e128d32dfba1d060b2d9c36e36c2e174948Add vera exclusionseditscripts/vera/exclusions.txttest/system/Asymptotic/ErrorOrder_2D_VMSDBR2_Triangle_AD_btest.cpptest/system/CodeConsistency/PDEmitAVDiffusionOuter2D_Consistency_btest.cppsrc/pde/NS/PDEmitAVDiffusionOuter2D.htest/sandbox/CMakeLists.txtsrc/pde/NS/PDEEulermitAVDiffusion2D.hsrc/pde/NS/PDEEulermitAVDiffusion3D.h0bf0bd7efbe3d939075ba9e79d9a88fe40540a8c1649251012000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduWarning fixes 2022-04-06 09:16:52 -04000bf0bd7efbe3d939075ba9e79d9a88fe40540a8cWarning fixeseditsrc/pde/NS/PDEmitAVDiffusionOuter2D.hedittest/system/CodeConsistency/PDEmitAVDiffusionOuter2D_Consistency_btest.cppeditsrc/pde/NS/PDEEulermitAVDiffusion2D.hedittest/system/Asymptotic/ErrorOrder_2D_VMSDBR2_Triangle_AD_btest.cppeditsrc/pde/NS/PDEEulermitAVDiffusion3D.hedittest/sandbox/CMakeLists.txtCMakeInclude/XCodeFileGlob.cmake4c96b70e7550809718fbe7db7d7e8e0d3c3b9a231649253234000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduProperly ignore ._ files in CMake 2022-04-06 09:53:54 -04004c96b70e7550809718fbe7db7d7e8e0d3c3b9a23Properly ignore ._ files in CMakeeditCMakeInclude/XCodeFileGlob.cmakesrc/Adaptation/MOESS/SolverInterface_VMSD_BR2.htest/system/Asymptotic/ErrorOrder_2D_VMSDBR2_Triangle_AD_btest.cpp5c8a608f55e280fd921f64c6dac2aa377efac62a1649258486000https://acdl.mit.edu/csi/user/blscblscblsc@mit.eduMissing override keyword in SolverInterface_VMSD_BR2. ErrorOrder_2D_VMSDBR2_Triangle_AD_btest runs in serial (communicator is split and each rank runs independently). 2022-04-06 11:21:26 -04005c8a608f55e280fd921f64c6dac2aa377efac62aMissing override keyword in SolverInterface_VMSD_BR2. ErrorOrder_2D_VMSDBR2_Triangle_AD_btest runs in serial (communicator is split and each rank runs independently).editsrc/Adaptation/MOESS/SolverInterface_VMSD_BR2.hedittest/system/Asymptotic/ErrorOrder_2D_VMSDBR2_Triangle_AD_btest.cppsrc/Adaptation/MOESS/SolverInterface_VMSD_BR2.h47e6bd25ef0d36240ecb56f3c6a6feaed7b19a551649261658000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduOne more warning fix 2022-04-06 12:14:18 -040047e6bd25ef0d36240ecb56f3c6a6feaed7b19a55One more warning fixeditsrc/Adaptation/MOESS/SolverInterface_VMSD_BR2.htest/sandbox/CMakeLists.txt967f78be67e5870cc79104781c6018b1121a62401649261778000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduWarning shows up in GNU 8 2022-04-06 12:16:18 -0400967f78be67e5870cc79104781c6018b1121a6240Warning shows up in GNU 8edittest/sandbox/CMakeLists.txttest/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cpp8233641332f6b5cdbb88e58d12832ae5c4cd5dee1649270393000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFix warning 2022-04-06 14:39:53 -04008233641332f6b5cdbb88e58d12832ae5c4cd5deeFix warningedittest/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cpptest/unit/pde/NS/PDERANSSA2D_btest.cpptest/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_Consistency_btest.cpptest/unit/pde/ArtificialViscosity/AVSensor_Source3D_Euler_btest.cpptest/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_NavierStokes_Consistency_btest.cpptest/system/CodeConsistency/PDEmitAVSensor2D_Consistency_RANSSA_btest.cppd5ec71350046286c9d84c4139694c9cf7bdda2f51649296426000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduRelax tolerances for intel 2022-04-06 21:53:46 -0400d5ec71350046286c9d84c4139694c9cf7bdda2f5Relax tolerances for inteledittest/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_Consistency_btest.cppedittest/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_NavierStokes_Consistency_btest.cppedittest/unit/pde/ArtificialViscosity/AVSensor_Source3D_Euler_btest.cppedittest/unit/pde/NS/PDERANSSA2D_btest.cppedittest/system/CodeConsistency/PDEmitAVSensor2D_Consistency_RANSSA_btest.cppsrc/pde/NS/PDEEuler3D.hsrc/pde/NS/OutputEuler3D.ha2d0825fc1f9cef86cb6a9c3120e739bf716c4561649302390000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduneedsSolutionGradient set to true for EntropyPower functional 2022-04-06 23:33:10 -0400a2d0825fc1f9cef86cb6a9c3120e739bf716c456needsSolutionGradient set to true for EntropyPower functionaleditsrc/pde/NS/PDEEuler3D.heditsrc/pde/NS/OutputEuler3D.hsrc/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.hcb4fc216ef5ad6a2c97f3c72c63bcf5cf125683f1649303912000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduAdd Entropy to rotor output 2022-04-06 23:58:32 -0400cb4fc216ef5ad6a2c97f3c72c63bcf5cf125683fAdd Entropy to rotor outputeditsrc/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.htest/unit/pde/ArtificialViscosity/AVSensor_Source3D_Euler_btest.cpp17a451387e5db272e1acd846424c8f40156c4a531649337481000https://acdl.mit.edu/csi/user/blscblscblsc@mit.eduUpdated tolerance for intel in AVSensor_Source3D_Euler_btest 2022-04-07 09:18:01 -040017a451387e5db272e1acd846424c8f40156c4a53Updated tolerance for intel in AVSensor_Source3D_Euler_btestedittest/unit/pde/ArtificialViscosity/AVSensor_Source3D_Euler_btest.cpptest/unit/pde/NS/PDEEuler3D_btest.cppsrc/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.h5f8079440d62e5353dfc667fa5a9125a58c846731649345653000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFix EntropyPt calculation. Remove old Euler3D source test. 2022-04-07 11:34:13 -04005f8079440d62e5353dfc667fa5a9125a58c84673Fix EntropyPt calculation. Remove old Euler3D source test.editsrc/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.hedittest/unit/pde/NS/PDEEuler3D_btest.cppsrc/pde/sansBOOM/AtmosphereStandard.htest/unit/pde/sansBOOM/AtmosphereStandard_btest.cpp2abc1a008bd1b2331980ccb8966b16b993efbe371649353713000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.eduadded gradients for standard atmosphere 2022-04-07 10:48:33 -07002abc1a008bd1b2331980ccb8966b16b993efbe37added gradients for standard atmosphereedittest/unit/pde/sansBOOM/AtmosphereStandard_btest.cppeditsrc/pde/sansBOOM/AtmosphereStandard.hsrc/pde/sansBOOM/AtmosphereIsothermal.htest/unit/pde/sansBOOM/AtmosphereIsothermal_btest.cppb3eee129d025878a1ad4cbf1d7099c1a135346811649356526000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.eduadded isothermal atmosphere model 2022-04-07 11:35:26 -0700b3eee129d025878a1ad4cbf1d7099c1a13534681added isothermal atmosphere modeladdsrc/pde/sansBOOM/AtmosphereIsothermal.haddtest/unit/pde/sansBOOM/AtmosphereIsothermal_btest.cppsrc/pde/sansBOOM/AtmosphereIsothermal.hsrc/pde/sansBOOM/AtmosphereStandard.htest/unit/pde/sansBOOM/AtmosphereStandard_btest.cpptest/unit/pde/sansBOOM/AtmosphereIsothermal_btest.cppdc9f139996b8de6da958d8e9b3079098808c52d51649440468000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.eduadded speed of sound to atmospheric models 2022-04-08 10:54:28 -0700dc9f139996b8de6da958d8e9b3079098808c52d5added speed of sound to atmospheric modelseditsrc/pde/sansBOOM/AtmosphereIsothermal.heditsrc/pde/sansBOOM/AtmosphereStandard.hedittest/unit/pde/sansBOOM/AtmosphereIsothermal_btest.cppedittest/unit/pde/sansBOOM/AtmosphereStandard_btest.cpptest/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_Consistency_btest.cpptest/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_NavierStokes_Consistency_btest.cpp6e2b3872436d0a944322a501bc89a0256be1cee31649446771000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduRelax tolerances for intel 2022-04-08 15:39:31 -04006e2b3872436d0a944322a501bc89a0256be1cee3Relax tolerances for inteledittest/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_Consistency_btest.cppedittest/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_NavierStokes_Consistency_btest.cpptest/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_Consistency_btest.cpptest/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_NavierStokes_Consistency_btest.cppfa59d386b0edb2f10d7bb4655e553bbe0f7e39071649460440000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduMore relaxed intel tolerances 2022-04-08 19:27:20 -0400fa59d386b0edb2f10d7bb4655e553bbe0f7e3907More relaxed intel tolerancesedittest/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_Consistency_btest.cppedittest/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_NavierStokes_Consistency_btest.cppsrc/Discretization/VMSDBR2/SolutionData_VMSD_BR2.h21e9348099992ea2f7e075e8696d4609c793ab1a1649475003000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduOne more method for VMSD data transfer 2022-04-08 23:30:03 -040021e9348099992ea2f7e075e8696d4609c793ab1aOne more method for VMSD data transfereditsrc/Discretization/VMSDBR2/SolutionData_VMSD_BR2.hsrc/UserInterfaces/BodyForceSolver_impl.hsrc/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.htest/unit/pde/NS/OutputEuler3D_btest.cppsrc/pde/NS/OutputEuler3D.hsrc/pde/ArtificialViscosity/AVSensor_Source3D.ha52fb8c51d17d721ebb525db8071ba9940ef63e21649566150000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduStabilized output for PV functional 2022-04-10 00:49:10 -0400a52fb8c51d17d721ebb525db8071ba9940ef63e2Stabilized output for PV functionaleditsrc/UserInterfaces/BodyForceSolver_impl.heditsrc/pde/ArtificialViscosity/AVSensor_Source3D.heditsrc/pde/NS/OutputEuler3D.heditsrc/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.haddtest/unit/pde/NS/OutputEuler3D_btest.cpptest/sandbox/Adapt2D_Galerkin_Stabilized_AD_AxiSymDoubleBoundaryLayer_toy.cpptest/unit/pde/AdvectionDiffusion/BCAdvectionDiffusion2D_btest.cppsrc/pde/AdvectionDiffusion/AdvectiveFlux2D.hsrc/pde/AnalyticFunction/ScalarFunction2D.cpptest/unit/IO/pde/PDEAdvectionDiffusion2D_AdvectiveFlux2D_pattern.txttest/unit/pde/AnalyticFunction/ScalarFunction2D_btest.cpptest/unit/IO/pde/ScalarFunction2D_pattern.txtsrc/pde/OutputCell_SolutionErrorL2_Axisym.hsrc/pde/AnalyticFunction/ScalarFunction2D.htest/unit/pde/AdvectionDiffusion/ViscousFlux2D_btest.cpptest/unit/pde/AdvectionDiffusion/AdvectiveFlux2D_btest.cppa1a04f9972671ff8e1f13eb3af85f64151be44bd1649601618000https://acdl.mit.edu/csi/user/cwomackcwomackcwomack@mit.eduFirst draft of Axisymmetric DBL problem, vera not working, may require multiple commits to get through jenkins 2022-04-10 10:40:18 -0400a1a04f9972671ff8e1f13eb3af85f64151be44bdFirst draft of Axisymmetric DBL problem, vera not working, may require multiple commits to get through jenkinsedittest/unit/pde/AdvectionDiffusion/BCAdvectionDiffusion2D_btest.cppedittest/unit/IO/pde/ScalarFunction2D_pattern.txtaddtest/sandbox/Adapt2D_Galerkin_Stabilized_AD_AxiSymDoubleBoundaryLayer_toy.cppaddsrc/pde/OutputCell_SolutionErrorL2_Axisym.heditsrc/pde/AdvectionDiffusion/AdvectiveFlux2D.heditsrc/pde/AnalyticFunction/ScalarFunction2D.heditsrc/pde/AnalyticFunction/ScalarFunction2D.cppedittest/unit/IO/pde/PDEAdvectionDiffusion2D_AdvectiveFlux2D_pattern.txtedittest/unit/pde/AnalyticFunction/ScalarFunction2D_btest.cppedittest/unit/pde/AdvectionDiffusion/AdvectiveFlux2D_btest.cppedittest/unit/pde/AdvectionDiffusion/ViscousFlux2D_btest.cpptest/sandbox/Adapt2D_Galerkin_Stabilized_AD_AxiSymDoubleBoundaryLayer_toy.cppbb2db7a60e903278fdd6e464d53458bc263b332c1649640703000https://acdl.mit.edu/csi/user/cwomackcwomackcwomack@mit.eduFixed scope issues 2022-04-10 21:31:43 -0400bb2db7a60e903278fdd6e464d53458bc263b332cFixed scope issuesedittest/sandbox/Adapt2D_Galerkin_Stabilized_AD_AxiSymDoubleBoundaryLayer_toy.cppsrc/pde/NS/BCNavierStokes2D.hsrc/pde/NS/BCNavierStokes2D.cpp943fe8de8db519cc6cc7dc3f1711e1eba5dfb18a1649795138000https://acdl.mit.edu/csi/user/blscblscblsc@mit.eduRemoved untested upwind option from isothermal walls in PDENavierStokes2D. It did not seem to be being used by any sandbox case or test. 2022-04-12 16:25:38 -0400943fe8de8db519cc6cc7dc3f1711e1eba5dfb18aRemoved untested upwind option from isothermal walls in PDENavierStokes2D. It did not seem to be being used by any sandbox case or test.editsrc/pde/NS/BCNavierStokes2D.cppeditsrc/pde/NS/BCNavierStokes2D.htest/sandbox/Adapt2D_Galerkin_Stabilized_AD_AxiSymDoubleBoundaryLayer_toy.cpptest/unit/pde/AdvectionDiffusion/AdvectiveFlux2D_btest.cpp93b11e3378dead534050f517864e8bee74427c8d1649798833000https://acdl.mit.edu/csi/user/cwomackcwomackcwomack@mit.edufixed vera errors 2022-04-12 17:27:13 -040093b11e3378dead534050f517864e8bee74427c8dfixed vera errorsedittest/unit/pde/AdvectionDiffusion/AdvectiveFlux2D_btest.cppedittest/sandbox/Adapt2D_Galerkin_Stabilized_AD_AxiSymDoubleBoundaryLayer_toy.cppsrc/pde/NS/BCNavierStokes2D.hsrc/pde/NS/BCNavierStokes2D.cpp13bfe5c26ca9689a73c5055334d8cd567ce86de11649799653000https://acdl.mit.edu/csi/user/blscblscblsc@mit.eduActually remove the code related to the upwind flag. 2022-04-12 17:40:53 -040013bfe5c26ca9689a73c5055334d8cd567ce86de1Actually remove the code related to the upwind flag.editsrc/pde/NS/BCNavierStokes2D.heditsrc/pde/NS/BCNavierStokes2D.cpptest/unit/pde/OutputCell_SolutionErrorL2_Axisym_btest.cppcb4115db30098762088b87f74f24f1b57cb2f3011649880985000https://acdl.mit.edu/csi/user/cwomackcwomackcwomack@mit.eduadded output axisymmetric unit tests 2022-04-13 16:16:25 -0400cb4115db30098762088b87f74f24f1b57cb2f301added output axisymmetric unit testsaddtest/unit/pde/OutputCell_SolutionErrorL2_Axisym_btest.cpptest/unit/pde/AdvectionDiffusion/ViscousFlux2D_btest.cppd27ec048ada83f8e6f62679763f8cc8dd1bd0fdf1649897032000https://acdl.mit.edu/csi/user/cwomackcwomackcwomack@mit.eduChanged unit test tolerance 2022-04-13 20:43:52 -0400d27ec048ada83f8e6f62679763f8cc8dd1bd0fdfChanged unit test toleranceedittest/unit/pde/AdvectionDiffusion/ViscousFlux2D_btest.cpptest/sandbox/Adapt2D_Galerkin_Stabilized_AD_AxiSymDoubleBoundaryLayer_toy.cpptest/unit/IO/pde/ScalarFunction2D_pattern.txttest/unit/pde/AdvectionDiffusion/BCAdvectionDiffusion2D_btest.cppsrc/pde/AnalyticFunction/ScalarFunction2D.cppsrc/pde/AnalyticFunction/ScalarFunction2D.htest/unit/pde/AnalyticFunction/ScalarFunction2D_btest.cpp62009cdce7e0e6c2c190c5ce29f694ceccd059651650502181000https://acdl.mit.edu/csi/user/cwomackcwomackcwomack@mit.eduGeneralized axisym DBL for any z0 z1 2022-04-20 20:49:41 -040062009cdce7e0e6c2c190c5ce29f694ceccd05965Generalized axisym DBL for any z0 z1edittest/sandbox/Adapt2D_Galerkin_Stabilized_AD_AxiSymDoubleBoundaryLayer_toy.cppeditsrc/pde/AnalyticFunction/ScalarFunction2D.cppeditsrc/pde/AnalyticFunction/ScalarFunction2D.hedittest/unit/pde/AdvectionDiffusion/BCAdvectionDiffusion2D_btest.cppedittest/unit/pde/AnalyticFunction/ScalarFunction2D_btest.cppedittest/unit/IO/pde/ScalarFunction2D_pattern.txtsrc/pde/AnalyticFunction/ScalarFunction2D.hd2668e41672bf0debc429097c472d1220b496c8d1650507229000https://acdl.mit.edu/csi/user/cwomackcwomackcwomack@mit.edufixed vera errors 2022-04-20 22:13:49 -0400d2668e41672bf0debc429097c472d1220b496c8dfixed vera errorseditsrc/pde/AnalyticFunction/ScalarFunction2D.hscripts/vera/exclusions.txttest/unit/pde/NS/PDEEuler3D_RotorSource_btest.cpptest/unit/pde/NS/PDEEulermitAVDiffusion3D_RotorSource_btest.cppsrc/Meshing/EGADS/RotorSource/Rotor.hsrc/pde/NS/PDEEuler3D_RotorSource.hsrc/Field/NormalField/NormalField_Volume.cppsrc/Meshing/EGADS/RotorSource/Rotor.cpp642036faa1c3f2cc6bef0edef7f86c725d4938171650582000000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduAdd asymmetric term for rotor source 2022-04-21 19:00:00 -0400642036faa1c3f2cc6bef0edef7f86c725d493817Add asymmetric term for rotor sourceeditsrc/Meshing/EGADS/RotorSource/Rotor.heditscripts/vera/exclusions.txtedittest/unit/pde/NS/PDEEulermitAVDiffusion3D_RotorSource_btest.cppeditsrc/Field/NormalField/NormalField_Volume.cppedittest/unit/pde/NS/PDEEuler3D_RotorSource_btest.cppeditsrc/Meshing/EGADS/RotorSource/Rotor.cppeditsrc/pde/NS/PDEEuler3D_RotorSource.hsrc/UserInterfaces/BodyForceSolver_impl.hd1dde69d27da5edf04dee3eeb37ff2a36dc80a5a1650593372000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFix compile errors 2022-04-21 22:09:32 -0400d1dde69d27da5edf04dee3eeb37ff2a36dc80a5aFix compile errorseditsrc/UserInterfaces/BodyForceSolver_impl.hsrc/pde/NS/PDEEuler3D_RotorSource.htest/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cppcf0f519eefaed347eb93ed16e2e44392c077ff471650647228000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFix bug in last commit 2022-04-22 13:07:08 -0400cf0f519eefaed347eb93ed16e2e44392c077ff47Fix bug in last commiteditsrc/pde/NS/PDEEuler3D_RotorSource.hedittest/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cpptest/unit/pde/NS/PDEEulermitAVDiffusion3D_btest.cpptest/unit/pde/NS/PDEEuler3D_RotorSource_btest.cppsrc/Meshing/EGADS/EGCircle.cpptest/unit/pde/NS/PDEEulermitAVDiffusion3D_RotorSource_btest.cppsrc/pde/NS/isPDERANSSA.htest/unit/pde/NS/PDEEulermitAVDiffusion3D_RANSSA_btest.cppsrc/pde/NS/PDEEulermitAVDiffusion2D.hsrc/pde/NS/PDEEulermitAVDiffusion3D.h847736ddc3e52b05a8f15e75e3b86926db5ece8d1650735334000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduCleanup sourcePositivity 2022-04-23 13:35:34 -0400847736ddc3e52b05a8f15e75e3b86926db5ece8dCleanup sourcePositivityeditsrc/Meshing/EGADS/EGCircle.cppeditsrc/pde/NS/PDEEulermitAVDiffusion2D.hedittest/unit/pde/NS/PDEEuler3D_RotorSource_btest.cppedittest/unit/pde/NS/PDEEulermitAVDiffusion3D_RANSSA_btest.cppeditsrc/pde/NS/isPDERANSSA.heditsrc/pde/NS/PDEEulermitAVDiffusion3D.hedittest/unit/pde/NS/PDEEulermitAVDiffusion3D_RotorSource_btest.cppedittest/unit/pde/NS/PDEEulermitAVDiffusion3D_btest.cppsrc/pde/ArtificialViscosity/AVSensor_Source2D.hsrc/tools/smoothmath.hsrc/pde/NS/PDEEulermitAVDiffusion2D.hsrc/pde/NS/Q2DPrimitiveSurrogate.he17a82e186e515774cbefc1fee838f6d4f81a1761650808524000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduWork around more floating point issues 2022-04-24 09:55:24 -0400e17a82e186e515774cbefc1fee838f6d4f81a176Work around more floating point issueseditsrc/pde/NS/Q2DPrimitiveSurrogate.heditsrc/pde/ArtificialViscosity/AVSensor_Source2D.heditsrc/pde/NS/PDEEulermitAVDiffusion2D.heditsrc/tools/smoothmath.hsrc/pde/ArtificialViscosity/AVSensor_Source2D.hsrc/pde/ArtificialViscosity/AVSensor_Source3D.ha933f8db7283af8c3c917c545140102d03b386381650815348000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduMore precision cleanup for AV source 2022-04-24 11:49:08 -0400a933f8db7283af8c3c917c545140102d03b38638More precision cleanup for AV sourceeditsrc/pde/ArtificialViscosity/AVSensor_Source2D.heditsrc/pde/ArtificialViscosity/AVSensor_Source3D.hsrc/tools/smoothmath.h0a7d510bbb7a3ad57e47ce798b3ba563738f348d1650815473000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFogot a file 2022-04-24 11:51:13 -04000a7d510bbb7a3ad57e47ce798b3ba563738f348dFogot a fileeditsrc/tools/smoothmath.hsrc/pde/NS/Q3DPrimitiveSurrogate.hsrc/pde/NS/Q2DPrimitiveSurrogate.h13e7fc0913ee9ef889779f4f5160f715d1e6cea71650816304000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduAllow setting critical surrogate values in 3D 2022-04-24 12:05:04 -040013e7fc0913ee9ef889779f4f5160f715d1e6cea7Allow setting critical surrogate values in 3Deditsrc/pde/NS/Q3DPrimitiveSurrogate.heditsrc/pde/NS/Q2DPrimitiveSurrogate.hsrc/pde/ArtificialViscosity/AVSensor_Source3D.h8351e58152c4eb4014045f1b1e877133dab4e5061650816834000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFix compile error 2022-04-24 12:13:54 -04008351e58152c4eb4014045f1b1e877133dab4e506Fix compile erroreditsrc/pde/ArtificialViscosity/AVSensor_Source3D.htest/unit/pde/NS/OutputEuler3D_btest.cppsrc/pde/ArtificialViscosity/AVSensor_Source2D.h233600a8b06b7fcc81b586db6da940828b16d3771650843076000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduCompiler error and warning fixes 2022-04-24 19:31:16 -0400233600a8b06b7fcc81b586db6da940828b16d377Compiler error and warning fixesedittest/unit/pde/NS/OutputEuler3D_btest.cppeditsrc/pde/ArtificialViscosity/AVSensor_Source2D.hsrc/pde/NS/PDEmitAVDiffusionOuter2D.hsrc/pde/ArtificialViscosity/AVSensor_Source2D.he9252a1dbdc21536a3f8f3158c721e24c3a413901650854808000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduMake outer diffusion positvity source consisent with inner 2022-04-24 22:46:48 -0400e9252a1dbdc21536a3f8f3158c721e24c3a41390Make outer diffusion positvity source consisent with innereditsrc/pde/NS/PDEmitAVDiffusionOuter2D.heditsrc/pde/ArtificialViscosity/AVSensor_Source2D.hsrc/pde/NS/PDERANSSA3D.htest/unit/pde/ArtificialViscosity/AVSensor_Source2D_Euler_btest.cpp6fe1aff769cf6fb9ef9266d3313584ba95b32bc71650895149000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduWarning and tolernace fixes 2022-04-25 09:59:09 -04006fe1aff769cf6fb9ef9266d3313584ba95b32bc7Warning and tolernace fixeseditsrc/pde/NS/PDERANSSA3D.hedittest/unit/pde/ArtificialViscosity/AVSensor_Source2D_Euler_btest.cppsrc/pde/NS/PDERANSSA3D.h618f4ef5957aaf1ac8253f17dd22d391049af6481650898265000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFix compile error 2022-04-25 10:51:05 -0400618f4ef5957aaf1ac8253f17dd22d391049af648Fix compile erroreditsrc/pde/NS/PDERANSSA3D.hsrc/pde/ArtificialViscosity/AVSensor_Source2D.htest/sandbox/Solve2D_VMSD_Triangle_NavierStokes_Joukowski_ArtificialViscosity_toy.cpptest/sandbox/Adapt3D_VMSDBR2_RANSSA_DPW_AV_HTC_toy.cppsrc/pde/NS/BCEulermitAVSensor2D.cpptest/sandbox/Adapt2D_CGStabilized_Triangle_RANSSA_Joukowski_ArtificialViscosity_toy.cpptest/sandbox/Adapt2D_VMSD_Triangle_RANSSA_Joukowski_ArtificialViscosity_toy.cpptest/sandbox/Adapt2D_VMSDBR2_RANSSA_AV_MultiElementAirfoil_Q1_toy.cpptest/sandbox/Solve2D_CGStabilized_HOW5_CI1_toy.cpptest/unit/pde/ArtificialViscosity/AVSensor_Source2D_Euler_btest.cpptest/sandbox/Adapt2D_CGStabilized_Triangle_RANSSA_Joukowski_Subsonic_ArtificialViscosity_toy.cpptest/sandbox/Adapt2D_CGStabilized_Triangle_RANSSA_Joukowski_Transonic_ArtificialViscosity_toy.cpptest/unit/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_Stabilized_Triangle_SA_btest.cpptest/sandbox/Solve2D_CGStabilized_Triangle_NavierStokes_Joukowski_ArtificialViscosity_toy.cppsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_ArtificialViscosity_RANSSA2D_PrimitiveSutherland.cpptest/sandbox/Solve2D_VMSD_HOW5_VI2_AV_toy.cpptest/sandbox/Solve2D_CGStabilized_Triangle_RANSSA_Joukowski_ArtificialViscosity_toy.cpptest/sandbox/Solve2D_CGStabilized_Triangle_NavierStokes_GaussianBump_ArtificialViscosity_toy.cpptest/sandbox/Solve2D_CGStabilized_Triangle_Euler_GaussianBump_ArtificialViscosity_toy.cpptest/sandbox/Adapt2D_VMSDBR2_RANSSA_AV_MultiElementAirfoil_toy.cpptest/sandbox/Solve2D_CGStabilized_Triangle_Euler_NACA0012_ArtificialViscosity_toy.cpptest/sandbox/Adapt2D_CGStabilized_HOW5_CI1_ArtificialViscosity_toy.cpptest/sandbox/Solve2D_VMSD_HOW5_CI1_toy.cppsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_ArtificialViscosity_RANSSA2D_PrimitiveConstVisc.cpptest/sandbox/Solve2D_DGBR2_HOW5_CI1_toy.cppfd2469bc0c6b18d9924fec0ee0ba99b12104f7861650905982000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduCleanup 2D PressureGrad sensor 2022-04-25 12:59:42 -0400fd2469bc0c6b18d9924fec0ee0ba99b12104f786Cleanup 2D PressureGrad sensoreditsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_ArtificialViscosity_RANSSA2D_PrimitiveConstVisc.cppedittest/sandbox/Adapt2D_CGStabilized_Triangle_RANSSA_Joukowski_Subsonic_ArtificialViscosity_toy.cppedittest/sandbox/Adapt2D_CGStabilized_HOW5_CI1_ArtificialViscosity_toy.cppedittest/sandbox/Adapt2D_CGStabilized_Triangle_RANSSA_Joukowski_ArtificialViscosity_toy.cppedittest/sandbox/Adapt2D_VMSDBR2_RANSSA_AV_MultiElementAirfoil_Q1_toy.cppedittest/sandbox/Adapt2D_VMSD_Triangle_RANSSA_Joukowski_ArtificialViscosity_toy.cppedittest/sandbox/Adapt3D_VMSDBR2_RANSSA_DPW_AV_HTC_toy.cppedittest/sandbox/Solve2D_VMSD_HOW5_VI2_AV_toy.cppedittest/sandbox/Solve2D_CGStabilized_Triangle_Euler_NACA0012_ArtificialViscosity_toy.cppedittest/sandbox/Adapt2D_CGStabilized_Triangle_RANSSA_Joukowski_Transonic_ArtificialViscosity_toy.cppedittest/sandbox/Solve2D_CGStabilized_Triangle_NavierStokes_Joukowski_ArtificialViscosity_toy.cppedittest/sandbox/Solve2D_CGStabilized_Triangle_RANSSA_Joukowski_ArtificialViscosity_toy.cppedittest/sandbox/Adapt2D_VMSDBR2_RANSSA_AV_MultiElementAirfoil_toy.cppedittest/sandbox/Solve2D_DGBR2_HOW5_CI1_toy.cppedittest/sandbox/Solve2D_CGStabilized_HOW5_CI1_toy.cppedittest/sandbox/Solve2D_CGStabilized_Triangle_NavierStokes_GaussianBump_ArtificialViscosity_toy.cppedittest/sandbox/Solve2D_VMSD_HOW5_CI1_toy.cppedittest/unit/pde/ArtificialViscosity/AVSensor_Source2D_Euler_btest.cppeditsrc/pde/ArtificialViscosity/AVSensor_Source2D.heditsrc/pde/NS/BCEulermitAVSensor2D.cppedittest/sandbox/Solve2D_CGStabilized_Triangle_Euler_GaussianBump_ArtificialViscosity_toy.cppedittest/unit/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_Stabilized_Triangle_SA_btest.cppeditsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_ArtificialViscosity_RANSSA2D_PrimitiveSutherland.cppedittest/sandbox/Solve2D_VMSD_Triangle_NavierStokes_Joukowski_ArtificialViscosity_toy.cpptest/unit/pde/ArtificialViscosity/AVSensor_Source2D_Euler_btest.cpp05788db0f4b2900c7a4c812481173ea6487b2e2a1650912467000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduRelax tolerance 2022-04-25 14:47:47 -040005788db0f4b2900c7a4c812481173ea6487b2e2aRelax toleranceedittest/unit/pde/ArtificialViscosity/AVSensor_Source2D_Euler_btest.cpptest/sandbox/Adapt2D_CGStabilized_HOW5_CI1_ArtificialViscosity_toy.cpp893850523f49a51ae12d91946ef989b7cba5b9b01650920746000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduMissed one 2022-04-25 17:05:46 -0400893850523f49a51ae12d91946ef989b7cba5b9b0Missed oneedittest/sandbox/Adapt2D_CGStabilized_HOW5_CI1_ArtificialViscosity_toy.cpptest/sandbox/Adapt2D_CGStabilized_Triangle_RANSSA_Joukowski_Transonic_ArtificialViscosity_toy.cpp4cfbb42fb901994a5b568f3d4b2860f56b7a60461650935048000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduMissed one more 2022-04-25 21:04:08 -04004cfbb42fb901994a5b568f3d4b2860f56b7a6046Missed one moreedittest/sandbox/Adapt2D_CGStabilized_Triangle_RANSSA_Joukowski_Transonic_ArtificialViscosity_toy.cpptest/unit/pde/ArtificialViscosity/AVSensor_Source3D_Euler_btest.cpp70a66dde83157c0bc681fcfe200d2f3f0e6dcf8b1650980916000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduRelax tolerance 2022-04-26 09:48:36 -040070a66dde83157c0bc681fcfe200d2f3f0e6dcf8bRelax toleranceedittest/unit/pde/ArtificialViscosity/AVSensor_Source3D_Euler_btest.cpptest/unit/pde/NS/PDEEulermitAVDiffusion3D_RANSSA_btest.cpptest/unit/pde/NS/PDEEulermitAVDiffusion3D_btest.cppsrc/pde/NS/PDEEulermitAVDiffusion3D.hc1381c0d3387adffeb7b3a6b0fe8e2a6b8210e671650996289000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduConsistent 3D positvity source with Ben's thesis 2022-04-26 14:04:49 -0400c1381c0d3387adffeb7b3a6b0fe8e2a6b8210e67Consistent 3D positvity source with Ben's thesiseditsrc/pde/NS/PDEEulermitAVDiffusion3D.hedittest/unit/pde/NS/PDEEulermitAVDiffusion3D_RANSSA_btest.cppedittest/unit/pde/NS/PDEEulermitAVDiffusion3D_btest.cppsrc/pde/ArtificialViscosity/AVSensor_Source2D.htest/unit/pde/NS/PDERANSSA2D_btest.cpptest/unit/pde/NS/PDEEuler2D_btest.cpptest/unit/pde/NS/PDEEuler3D_btest.cpptest/unit/pde/NS/PDEEuler3D_RotorSource_btest.cpptest/unit/pde/NS/PDEEulermitAVDiffusion3D_RotorSource_btest.cppsrc/pde/ArtificialViscosity/AVSensor_Source3D.hsrc/UserInterfaces/BodyForceSolver_impl.hsrc/pde/NS/EulerArtificialViscosityType.hsrc/pde/NS/PDEEuler3D_RotorSource.htest/unit/pde/NS/PDEEulermitAVDiffusion2D_btest.cppsrc/pde/NS/PDEEulermitAVDiffusion2D.hbf32744b0b7f351777f62c2530f940f57beee4c51651179561000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduAdd asymmetric sensitvities for body forces. Some more cleanup of shock capturing. 2022-04-28 16:59:21 -0400bf32744b0b7f351777f62c2530f940f57beee4c5Add asymmetric sensitvities for body forces. Some more cleanup of shock capturing.editsrc/pde/ArtificialViscosity/AVSensor_Source2D.hedittest/unit/pde/NS/PDEEulermitAVDiffusion2D_btest.cppedittest/unit/pde/NS/PDEEulermitAVDiffusion3D_RotorSource_btest.cppeditsrc/pde/ArtificialViscosity/AVSensor_Source3D.heditsrc/pde/NS/EulerArtificialViscosityType.heditsrc/pde/NS/PDEEuler3D_RotorSource.heditsrc/UserInterfaces/BodyForceSolver_impl.heditsrc/pde/NS/PDEEulermitAVDiffusion2D.hedittest/unit/pde/NS/PDEEuler3D_btest.cppedittest/unit/pde/NS/PDERANSSA2D_btest.cppedittest/unit/pde/NS/PDEEuler2D_btest.cppedittest/unit/pde/NS/PDEEuler3D_RotorSource_btest.cppsrc/pde/NS/PDEmitAVDiffusionOuter2D.h9f67c3aaa8102da2337a8b1e324e2051ed5a312c1651188661000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduMake PDEmitAVDiffusionOuter2D.h consistent 2022-04-28 19:31:01 -04009f67c3aaa8102da2337a8b1e324e2051ed5a312cMake PDEmitAVDiffusionOuter2D.h consistenteditsrc/pde/NS/PDEmitAVDiffusionOuter2D.hsrc/UserInterfaces/BodyForceSolver_impl.h12e928937d0d33c7386d9ea6d2e1696dc4302b791651200709000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFix warning and typo 2022-04-28 22:51:49 -040012e928937d0d33c7386d9ea6d2e1696dc4302b79Fix warning and typoeditsrc/UserInterfaces/BodyForceSolver_impl.htest/unit/pde/NS/PDEEulermitAVDiffusion2D_btest.cpptest/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_NavierStokes_Consistency_btest.cppdb5dc92754b6bcf917db37e01a9b9722e4de63351651240633000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduRelax tolerance and fix warning 2022-04-29 09:57:13 -0400db5dc92754b6bcf917db37e01a9b9722e4de6335Relax tolerance and fix warningedittest/unit/pde/NS/PDEEulermitAVDiffusion2D_btest.cppedittest/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_NavierStokes_Consistency_btest.cpptest/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_Consistency_btest.cpp010a9b2b58eecb779d9c5840eeeb9c0314eff3511651253416000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduOne more tolerance relaxation 2022-04-29 13:30:16 -0400010a9b2b58eecb779d9c5840eeeb9c0314eff351One more tolerance relaxationedittest/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_Consistency_btest.cppsrc/tools/smoothmath.hsrc/pde/NS/PDEEuler3D_RotorSource.htest/unit/pde/NS/PDEEuler3D_RotorSource_btest.cpptest/unit/pde/NS/PDEEulermitAVDiffusion3D_RotorSource_btest.cpp855c6dcb6d4db2114d1475a4c8d826272a25e3d61651424795000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduAdd parameters to rotate body force normal field 2022-05-01 13:06:35 -0400855c6dcb6d4db2114d1475a4c8d826272a25e3d6Add parameters to rotate body force normal fieldeditsrc/pde/NS/PDEEuler3D_RotorSource.heditsrc/tools/smoothmath.hedittest/unit/pde/NS/PDEEuler3D_RotorSource_btest.cppedittest/unit/pde/NS/PDEEulermitAVDiffusion3D_RotorSource_btest.cppsrc/LinearAlgebra/DenseLinAlg/StaticSize/MatMul/MatrixS_MatMul_Native_Surreal_Instantiate.cpp516e4e8d607f1fe7a5d935524dce8e080d9c84561651425467000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduForgot instantiation 2022-05-01 13:17:47 -0400516e4e8d607f1fe7a5d935524dce8e080d9c8456Forgot instantiationeditsrc/LinearAlgebra/DenseLinAlg/StaticSize/MatMul/MatrixS_MatMul_Native_Surreal_Instantiate.cppsrc/pde/ArtificialViscosity/PDEmitAVSensorInner2D.hsrc/Discretization/VMSDBR2/AlgebraicEquationSet_Local_VMSD_BR2.htest/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_NavierStokes_Consistency_btest.cppsrc/pde/NS/PDERANSSA2D.hsrc/pde/ArtificialViscosity/PDEmitAVSensor3D.hsrc/pde/NS/PDEEulermitAVDiffusion3D.hsrc/Discretization/DG/AlgebraicEquationSet_Local_DG_impl.htest/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_Consistency_btest.cppsrc/Meshing/AnalyticMetrics/BoundaryLayer.hsrc/pde/NDConvert/PDENDConvertSpace2D.hsrc/Discretization/DG/AlgebraicEquationSet_DGBR2_impl.hsrc/pde/NS/PDEEuler3D.hsrc/Meshing/AnalyticMetrics/Euclidean.hsrc/pde/ArtificialViscosity/AVSensor_Source2D.hsrc/pde/NS/PDERANSSA3D.hsrc/Python/InputException.cppsrc/Discretization/VMSDBR2/AlgebraicEquationSet_VMSD_BR2.hsrc/pde/NS/BCEulermitAVSensor2D.hsrc/pde/NS/BCEuler2D_mitState.hsrc/LinearAlgebra/DenseLinAlg/StaticSize/MatrixS_Pow.hsrc/Discretization/Galerkin/AlgebraicEquationSet_Local_Galerkin_Stabilized.hsrc/pde/NS/PDEEuler2D.hsrc/pde/NS/BCEulermitAVSensor3D.htest/unit/pde/NS/PDEEuler2D_btest.cppsrc/LinearAlgebra/DenseLinAlg/DynamicSize/MatrixD_Diag.hsrc/pde/AdvectionDiffusion/PDEAdvectionDiffusion3D.hsrc/pde/ArtificialViscosity/AVSensor_Source3D.hsrc/Meshing/AnalyticMetrics/CornerSingularity.hsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_Stabilized_LiftedBoundary.htest/unit/SolutionTrek/Continuation/PDESourceOnly_btest.cpptest/unit/pde/NS/PDERANSSA3D_btest.cppsrc/LinearAlgebra/DenseLinAlg/StaticSize/MatrixS_Log.hsrc/Meshing/AnalyticMetrics/XField.hsrc/pde/NS/PDEEuler3D_RotorSource.hsrc/LinearAlgebra/DenseLinAlg/StaticSize/MatrixS_Exp.hsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective_impl.hsrc/Discretization/Galerkin/AlgebraicEquationSet_Local_Galerkin_Stabilized_LiftedBoundary.htest/unit/pde/NS/PDERANSSA2D_btest.cppsrc/pde/AdvectionDiffusion/PDEAdvectionDiffusion2D.hCMakeInclude/ForceOutOfSource.cmakesrc/Discretization/DG/AlgebraicEquationSet_DGBR2.hsrc/SolutionTrek/Continuation/Homotopy/PDESourceOnly.hsrc/pde/NS/PDEEulermitAVDiffusion2D.hsrc/pde/ArtificialViscosity/PDEmitAVSensor2D.hsrc/LinearAlgebra/DenseLinAlg/StaticSize/MatrixS_Diag.htest/unit/pde/ArtificialViscosity/PDEmitAVSensor2D_btest.cpptest/unit/pde/NS/PDEEuler3D_btest.cpptest/unit/pde/NS/BCEulermitAVSensor2D_btest.cppsrc/UserInterfaces/BodyForceSolver_impl.hsrc/SolutionTrek/Continuation/Homotopy/Homotopy.hsrc/Python/InputException.hsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective.hsrc/pde/NDConvert/PDENDConvertSpace3D.hf403651e6f3b2a69c8805b302cc6efbf52dfcec11651517270000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduMake lifting operator calculation lazy to prevent computing lifting operators in isValidState. Homotopy fix for negative lambda. Charachteristic SupersonicOutflow in 2D. Dirichlet NoSlip BC for Sensor PDE. Some cleanup of MatrixS_Diag. 2022-05-02 14:47:50 -0400f403651e6f3b2a69c8805b302cc6efbf52dfcec1Make lifting operator calculation lazy to prevent computing lifting operators in isValidState. Homotopy fix for negative lambda. Charachteristic SupersonicOutflow in 2D. Dirichlet NoSlip BC for Sensor PDE. Some cleanup of MatrixS_Diag.editsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective_impl.heditsrc/LinearAlgebra/DenseLinAlg/DynamicSize/MatrixD_Diag.heditsrc/pde/NS/BCEuler2D_mitState.heditsrc/Discretization/Galerkin/AlgebraicEquationSet_Local_Galerkin_Stabilized.hedittest/unit/pde/NS/PDERANSSA2D_btest.cppedittest/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_Consistency_btest.cppeditCMakeInclude/ForceOutOfSource.cmakeeditsrc/Discretization/VMSDBR2/AlgebraicEquationSet_VMSD_BR2.heditsrc/Python/InputException.cppeditsrc/UserInterfaces/BodyForceSolver_impl.heditsrc/pde/NS/BCEulermitAVSensor3D.heditsrc/pde/NDConvert/PDENDConvertSpace2D.heditsrc/Discretization/Galerkin/AlgebraicEquationSet_Local_Galerkin_Stabilized_LiftedBoundary.heditsrc/pde/NS/PDERANSSA2D.heditsrc/LinearAlgebra/DenseLinAlg/StaticSize/MatrixS_Log.heditsrc/pde/NS/PDEEulermitAVDiffusion2D.heditsrc/pde/NS/PDEEuler3D_RotorSource.heditsrc/Python/InputException.heditsrc/pde/ArtificialViscosity/PDEmitAVSensor2D.heditsrc/Meshing/AnalyticMetrics/XField.hedittest/unit/pde/ArtificialViscosity/PDEmitAVSensor2D_btest.cppeditsrc/LinearAlgebra/DenseLinAlg/StaticSize/MatrixS_Diag.heditsrc/SolutionTrek/Continuation/Homotopy/PDESourceOnly.heditsrc/pde/ArtificialViscosity/PDEmitAVSensor3D.heditsrc/pde/ArtificialViscosity/AVSensor_Source2D.heditsrc/pde/ArtificialViscosity/PDEmitAVSensorInner2D.heditsrc/pde/AdvectionDiffusion/PDEAdvectionDiffusion3D.heditsrc/Discretization/DG/AlgebraicEquationSet_Local_DG_impl.heditsrc/pde/NS/BCEulermitAVSensor2D.hedittest/unit/pde/NS/BCEulermitAVSensor2D_btest.cppeditsrc/pde/NS/PDEEulermitAVDiffusion3D.heditsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_Stabilized_LiftedBoundary.heditsrc/LinearAlgebra/DenseLinAlg/StaticSize/MatrixS_Pow.heditsrc/SolutionTrek/Continuation/Homotopy/Homotopy.heditsrc/Discretization/DG/AlgebraicEquationSet_DGBR2.heditsrc/Meshing/AnalyticMetrics/CornerSingularity.heditsrc/pde/NS/PDEEuler3D.heditsrc/pde/NS/PDERANSSA3D.hedittest/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_NavierStokes_Consistency_btest.cppedittest/unit/pde/NS/PDEEuler3D_btest.cppeditsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective.heditsrc/LinearAlgebra/DenseLinAlg/StaticSize/MatrixS_Exp.heditsrc/pde/NS/PDEEuler2D.heditsrc/Discretization/DG/AlgebraicEquationSet_DGBR2_impl.hedittest/unit/SolutionTrek/Continuation/PDESourceOnly_btest.cppeditsrc/Discretization/VMSDBR2/AlgebraicEquationSet_Local_VMSD_BR2.heditsrc/pde/NDConvert/PDENDConvertSpace3D.heditsrc/pde/AdvectionDiffusion/PDEAdvectionDiffusion2D.heditsrc/Meshing/AnalyticMetrics/BoundaryLayer.heditsrc/pde/ArtificialViscosity/AVSensor_Source3D.hedittest/unit/pde/NS/PDEEuler2D_btest.cppedittest/unit/pde/NS/PDERANSSA3D_btest.cppeditsrc/Meshing/AnalyticMetrics/Euclidean.htest/unit/SolutionTrek/Continuation/PDESourceOnly_btest.cpp185a8225dd488047f83be96f2c6e4cc70940b8761651540582000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFix test for last commit 2022-05-02 21:16:22 -0400185a8225dd488047f83be96f2c6e4cc70940b876Fix test for last commitedittest/unit/SolutionTrek/Continuation/PDESourceOnly_btest.cppsrc/Discretization/DG/AlgebraicEquationSet_DGBR2_impl.hf244e2d8548e9695f90fd683e23f85a99857198f1651546034000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFix for lazy lifting operator calculations 2022-05-02 22:47:14 -0400f244e2d8548e9695f90fd683e23f85a99857198fFix for lazy lifting operator calculationseditsrc/Discretization/DG/AlgebraicEquationSet_DGBR2_impl.hsrc/pde/sansBOOM/AtmosphereStandard.hsrc/pde/sansBOOM/RayPath.hsrc/pde/sansBOOM/AtmosphereStandard.cppsrc/pde/sansBOOM/CMakeLists.txt958f0dd44e98b3feb39fd9357d4f9a7aa770a1eb1651728198000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.edustandard atmo: moved non-templated functions to *.cpp file 2022-05-04 22:23:18 -0700958f0dd44e98b3feb39fd9357d4f9a7aa770a1ebstandard atmo: moved non-templated functions to *.cpp fileaddsrc/pde/sansBOOM/AtmosphereStandard.cppeditsrc/pde/sansBOOM/AtmosphereStandard.heditsrc/pde/sansBOOM/CMakeLists.txteditsrc/pde/sansBOOM/RayPath.hsrc/pde/sansBOOM/RayPath.h57bfdd5cba61b34344c3d201fa83a67456a53dd41651735135000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.edustupid tabs!! 2022-05-05 00:18:55 -070057bfdd5cba61b34344c3d201fa83a67456a53dd4stupid tabs!!editsrc/pde/sansBOOM/RayPath.hsrc/pde/sansBOOM/AtmosphereStandard.cpp97a4ab4b844f6d9ee72932a6debefe744fc9e2e31651761293000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.edunamespace needed in cpp file 2022-05-05 07:34:53 -070097a4ab4b844f6d9ee72932a6debefe744fc9e2e3namespace needed in cpp fileeditsrc/pde/sansBOOM/AtmosphereStandard.cppsrc/Adaptation/MOESS/SolverInterface_VMSD_BR2.hd148ab7b0f292945e790e71777a5eb63304d2c121651776389000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFix for turning off USE_CORRECTION_TERM 2022-05-05 14:46:29 -0400d148ab7b0f292945e790e71777a5eb63304d2c12Fix for turning off USE_CORRECTION_TERMeditsrc/Adaptation/MOESS/SolverInterface_VMSD_BR2.htest/unit/pde/NS/PDEEulermitAVDiffusion3D_btest.cpptest/unit/pde/NS/PDERANSSA2D_btest.cpptest/unit/pde/NS/PDEEuler2D_btest.cpptest/unit/pde/NS/PDEEulermitAVDiffusion2D_btest.cpp7c0725e4bf81697be2abe238e244783ea644c2ca1651781860000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.eduremoved DeveloperException check for hessians of density-temperature primitive vars 2022-05-05 13:17:40 -07007c0725e4bf81697be2abe238e244783ea644c2caremoved DeveloperException check for hessians of density-temperature primitive varsedittest/unit/pde/NS/PDEEulermitAVDiffusion2D_btest.cppedittest/unit/pde/NS/PDEEuler2D_btest.cppedittest/unit/pde/NS/PDEEulermitAVDiffusion3D_btest.cppedittest/unit/pde/NS/PDERANSSA2D_btest.cppsrc/Adaptation/MOESS/SolverInterface_VMSD_BR2.hde41a73d8a29ae91cea3a69f212da4250dc700111651785732000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduAnother correction to turning off USE_CORRECTION_TERM 2022-05-05 17:22:12 -0400de41a73d8a29ae91cea3a69f212da4250dc70011Another correction to turning off USE_CORRECTION_TERMeditsrc/Adaptation/MOESS/SolverInterface_VMSD_BR2.htest/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_NavierStokes_Consistency_btest.cpp28744ee522335e8ad0caaa148212ff0e76fda0bd1651851033000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduRelax tolerance 2022-05-06 11:30:33 -040028744ee522335e8ad0caaa148212ff0e76fda0bdRelax toleranceedittest/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_NavierStokes_Consistency_btest.cppsrc/Discretization/DG/AlgebraicEquationSet_DGBR2_impl.hsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_Stabilized_LiftedBoundary.hsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective_impl.hsrc/Discretization/VMSDBR2/AlgebraicEquationSet_VMSD_BR2.hf66d107ed03a95073beb5945cef0e67845bc75051651870301000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduOnly compute lifting operatos if setSolutionField is called. Needed for proper error estimates. 2022-05-06 16:51:41 -0400f66d107ed03a95073beb5945cef0e67845bc7505Only compute lifting operatos if setSolutionField is called. Needed for proper error estimates.editsrc/Discretization/VMSDBR2/AlgebraicEquationSet_VMSD_BR2.heditsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_Stabilized_LiftedBoundary.heditsrc/Discretization/DG/AlgebraicEquationSet_DGBR2_impl.heditsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective_impl.htest/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_Consistency_btest.cpp7c85d1d67e14a7f9a3e2acb415f01634ce9311dd1651886430000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduMore intel tolerance relaxing 2022-05-06 21:20:30 -04007c85d1d67e14a7f9a3e2acb415f01634ce9311ddMore intel tolerance relaxingedittest/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_Consistency_btest.cpptest/unit/pde/ArtificialViscosity/PDEmitAVSensor2D_btest.cpp3f324c9d67c052d46ddd5efee1adef23e31d1ded1651930373000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduRemove DeveloperException check 2022-05-07 09:32:53 -04003f324c9d67c052d46ddd5efee1adef23e31d1dedRemove DeveloperException checkedittest/unit/pde/ArtificialViscosity/PDEmitAVSensor2D_btest.cppsrc/Adaptation/MOESS/NodalMetrics/NodalMetrics_impl.h2be3211001189b7ca3c7a7a00c6e53f0c181999b1651947404000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduUse implied metric in cost calculation for isotropic optimization 2022-05-07 14:16:44 -04002be3211001189b7ca3c7a7a00c6e53f0c181999bUse implied metric in cost calculation for isotropic optimizationeditsrc/Adaptation/MOESS/NodalMetrics/NodalMetrics_impl.htest/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_Consistency_btest.cpp72948da136294fc0d7f0d8694a94beee8b3266a91651981493000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduRelaxier tolerance 2022-05-07 23:44:53 -040072948da136294fc0d7f0d8694a94beee8b3266a9Relaxier toleranceedittest/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_Consistency_btest.cpptest/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_NavierStokes_Consistency_btest.cppd339449eeea3e6ad4f8670f97823963b9b3cf4b11652024555000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduAnother tolerance relaxation 2022-05-08 11:42:35 -0400d339449eeea3e6ad4f8670f97823963b9b3cf4b1Another tolerance relaxationedittest/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_NavierStokes_Consistency_btest.cpptest/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_Consistency_btest.cpp27f5548d94e8e18a325c812476d068340b22282d1652038641000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduIntel... 2022-05-08 15:37:21 -040027f5548d94e8e18a325c812476d068340b22282dIntel...edittest/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_Consistency_btest.cpptest/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_NavierStokes_Consistency_btest.cppa514fe3ef59a7252e00cbf0801a65155e9785a951652038808000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduIntel... 2022-05-08 15:40:08 -0400a514fe3ef59a7252e00cbf0801a65155e9785a95Intel...edittest/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_NavierStokes_Consistency_btest.cppgithttps://acdl.mit.edu/csi/user/blscblschttps://acdl.mit.edu/csi/user/cwomackcwomackhttps://acdl.mit.edu/csi/user/allmarasallmarashttps://acdl.mit.edu/csi/user/galbramcgalbramcStarted by upstream project "SANS_avro" build number 7171SANS_avrojob/SANS_avro/7165513c5e44307666de0bc540acf3d9811eeafe5f65513c5e44307666de0bc540acf3d9811eeafe5facdl/develop65513c5e44307666de0bc540acf3d9811eeafe5f65513c5e44307666de0bc540acf3d9811eeafe5facdl/develop65513c5e44307666de0bc540acf3d9811eeafe5f65513c5e44307666de0bc540acf3d9811eeafe5facdl/developssh://jenkins@acdl.mit.edu/home/svnroot/SANSproto/false#71323462760752SANS_avro » release_clang,reynolds #7171falsefalse71241345SUCCESS1649207515937https://acdl.mit.edu/csi/job/SANS_avro/builddir=release_clang,buildnode=reynolds/71/reynoldsgitStarted by upstream project "SANS_avro" build number 7070SANS_avrojob/SANS_avro/7065513c5e44307666de0bc540acf3d9811eeafe5f65513c5e44307666de0bc540acf3d9811eeafe5facdl/develop65513c5e44307666de0bc540acf3d9811eeafe5f65513c5e44307666de0bc540acf3d9811eeafe5facdl/develop65513c5e44307666de0bc540acf3d9811eeafe5f65513c5e44307666de0bc540acf3d9811eeafe5facdl/developssh://jenkins@acdl.mit.edu/home/svnroot/SANSproto/false#70327427760752SANS_avro » 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6868SANS_avrojob/SANS_avro/6865513c5e44307666de0bc540acf3d9811eeafe5f65513c5e44307666de0bc540acf3d9811eeafe5facdl/develop65513c5e44307666de0bc540acf3d9811eeafe5f65513c5e44307666de0bc540acf3d9811eeafe5facdl/develop65513c5e44307666de0bc540acf3d9811eeafe5f65513c5e44307666de0bc540acf3d9811eeafe5facdl/developssh://jenkins@acdl.mit.edu/home/svnroot/SANSproto/false#68330236760752SANS_avro » release_clang,reynolds #6868falsefalse68241113SUCCESS1649194818186https://acdl.mit.edu/csi/job/SANS_avro/builddir=release_clang,buildnode=reynolds/68/reynoldsgitStarted by upstream project "SANS_avro" build number 6767SANS_avrojob/SANS_avro/6765513c5e44307666de0bc540acf3d9811eeafe5f65513c5e44307666de0bc540acf3d9811eeafe5facdl/develop65513c5e44307666de0bc540acf3d9811eeafe5f65513c5e44307666de0bc540acf3d9811eeafe5facdl/develop65513c5e44307666de0bc540acf3d9811eeafe5f65513c5e44307666de0bc540acf3d9811eeafe5facdl/developssh://jenkins@acdl.mit.edu/home/svnroot/SANSproto/false#67577226760752SANS_avro » release_clang,reynolds #6767falsefalse67239605SUCCESS1649077307436https://acdl.mit.edu/csi/job/SANS_avro/builddir=release_clang,buildnode=reynolds/67/reynoldssrc/pde/NS/OutputEuler3D.h2669c254b2ee3c1b17c712ca3ff9fa2ed7ba4ef61648075288000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduAnother mechanical power correction 2022-03-23 18:41:28 -04002669c254b2ee3c1b17c712ca3ff9fa2ed7ba4ef6Another mechanical power correctioneditsrc/pde/NS/OutputEuler3D.htest/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cppsrc/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_ArtificialViscosity_RANSSA3D_PrimitiveSutherland.cpptest/sandbox/Adapt3D_VMSDBR2_RANSSA_DPW_AV_HTC_toy.cpptest/unit/pde/ArtificialViscosity/AVSensor_Source3D_Euler_btest.cppsrc/Field/output_Tecplot/output_Tecplot_RotorSource.cppsrc/pde/ArtificialViscosity/AVSensor_Source3D.htest/sandbox/Adapt3D_DGBR2_RANSSA_CRM_toy.cpptest/sandbox/Solve3D_CGStabilized_Euler_Bump_ArtificialViscosity_toy.cppsrc/pde/NS/BCEuler3D_Solution.cpptest/sandbox/Solve3D_CGStabilized_RANSSA_OneraM6_ArtificialViscosity_toy.cppsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_ArtificialViscosity_RANSSA3D_PrimitiveSutherland.cppsrc/UserInterfaces/BodyForceSolver_PDE.htest/sandbox/Adapt2D_VMSDBR2_RANSSA_Supersonic_AV_HTC_toy.cppsrc/Field/NormalField/DeltaRef/ProjectDeltaRef.cppsrc/Field/NormalField/ProfileLoss/ProfileLoss.cpptest/sandbox/Solve3D_DGBR2_RANSSA_CRM_toy.cppsrc/Meshing/Embedding/MesherInterface_Embedding.cpptest/sandbox/Solve3D_CGStabilized_RANSSA_OneraM6_Subsonic_ArtificialViscosity_toy.cppsrc/UserInterfaces/BodyForceSolver_impl.htest/sandbox/Adapt3D_DGBR2_RANSSA_ArtificialViscosity_ONERA_M6_toy.cppsrc/pde/NS/BCEulermitAVSensor3D.cpptest/sandbox/Adapt3D_CGStabilized_RANSSA_ArtificialViscosity_ONERA_M6_toy.cpp6171f0fd57da4fd111ca30f9cbda55c98d0a681c1648149956000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduRemove Sensor template from AVSensor_Source3D_PressureGrad 2022-03-24 15:25:56 -04006171f0fd57da4fd111ca30f9cbda55c98d0a681cRemove Sensor template from AVSensor_Source3D_PressureGradedittest/sandbox/Adapt2D_VMSDBR2_RANSSA_Supersonic_AV_HTC_toy.cppedittest/sandbox/Solve3D_CGStabilized_RANSSA_OneraM6_Subsonic_ArtificialViscosity_toy.cppedittest/unit/pde/ArtificialViscosity/AVSensor_Source3D_Euler_btest.cppeditsrc/Field/NormalField/DeltaRef/ProjectDeltaRef.cppeditsrc/Meshing/Embedding/MesherInterface_Embedding.cppedittest/sandbox/Solve3D_DGBR2_RANSSA_CRM_toy.cppeditsrc/pde/ArtificialViscosity/AVSensor_Source3D.hedittest/sandbox/Adapt3D_VMSDBR2_RANSSA_DPW_AV_HTC_toy.cppedittest/sandbox/Adapt3D_DGBR2_RANSSA_ArtificialViscosity_ONERA_M6_toy.cppeditsrc/UserInterfaces/BodyForceSolver_PDE.heditsrc/UserInterfaces/BodyForceSolver_impl.hedittest/sandbox/Solve3D_CGStabilized_RANSSA_OneraM6_ArtificialViscosity_toy.cppeditsrc/Field/output_Tecplot/output_Tecplot_RotorSource.cppeditsrc/pde/NS/BCEulermitAVSensor3D.cppeditsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_ArtificialViscosity_RANSSA3D_PrimitiveSutherland.cppeditsrc/pde/NS/BCEuler3D_Solution.cppedittest/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cppedittest/sandbox/Adapt3D_CGStabilized_RANSSA_ArtificialViscosity_ONERA_M6_toy.cppedittest/sandbox/Adapt3D_DGBR2_RANSSA_CRM_toy.cppedittest/sandbox/Solve3D_CGStabilized_Euler_Bump_ArtificialViscosity_toy.cppeditsrc/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_ArtificialViscosity_RANSSA3D_PrimitiveSutherland.cppeditsrc/Field/NormalField/ProfileLoss/ProfileLoss.cpptest/sandbox/Adapt3D_CGStabilized_RANSSA_ArtificialViscosity_ONERA_M6_toy.cpp9fc2ad781e82a7d755857a4485dffb76226acc941648229165000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFix compile error 2022-03-25 13:26:05 -04009fc2ad781e82a7d755857a4485dffb76226acc94Fix compile erroredittest/sandbox/Adapt3D_CGStabilized_RANSSA_ArtificialViscosity_ONERA_M6_toy.cppsrc/Field/NormalField/ProfileLoss/ProfileLoss.hsrc/Field/NormalField/ProfileLoss/ProfileLoss.cppsrc/UserInterfaces/BodyForceSolver_impl.ha80de9feb96f95d4e885da58e28d2bd6edbd71b11648232665000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduReturn delta's for both LE and TE edges for BodyForces 2022-03-25 14:24:25 -0400a80de9feb96f95d4e885da58e28d2bd6edbd71b1Return delta's for both LE and TE edges for BodyForceseditsrc/Field/NormalField/ProfileLoss/ProfileLoss.cppeditsrc/Field/NormalField/ProfileLoss/ProfileLoss.heditsrc/UserInterfaces/BodyForceSolver_impl.htest/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cppsrc/Discretization/Galerkin/FunctionalCell_Galerkin.hsrc/UserInterfaces/BodyForceSolver.hsrc/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.hsrc/Discretization/Galerkin/IntegrandCell_Galerkin_Output.hsrc/UserInterfaces/BodyForceSolver_impl.hsrc/pde/NS/PDEEuler3D_RotorSource.h5820cf45de297bff905f8d6cddddf5075f7709811648416285000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduAdd Deviation Angle Square output function for Body Forces 2022-03-27 17:24:45 -04005820cf45de297bff905f8d6cddddf5075f770981Add Deviation Angle Square output function for Body Forcesedittest/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cppeditsrc/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.heditsrc/Discretization/Galerkin/IntegrandCell_Galerkin_Output.heditsrc/UserInterfaces/BodyForceSolver.heditsrc/pde/NS/PDEEuler3D_RotorSource.heditsrc/UserInterfaces/BodyForceSolver_impl.heditsrc/Discretization/Galerkin/FunctionalCell_Galerkin.htest/sandbox/Adapt2D_Galerkin_Stabilized_AD_DoubleBoundaryLayer_toy.cpp3d65e7342271e18fa2caa7dcaad61a975013d0d61648426641000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduMissing include 2022-03-27 20:17:21 -04003d65e7342271e18fa2caa7dcaad61a975013d0d6Missing includeedittest/sandbox/Adapt2D_Galerkin_Stabilized_AD_DoubleBoundaryLayer_toy.cpptest/system/Asymptotic/ErrorEstimateOrder_2D_CG_Triangle_AD_btest.cpptest/system/Asymptotic/ErrorEstimateOrder_2D_CG_Triangle_RD_btest.cppbc7582037d3237724a4057bad03e30a8929e016e1648431730000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduMore compile fixes 2022-03-27 21:42:10 -0400bc7582037d3237724a4057bad03e30a8929e016eMore compile fixesedittest/system/Asymptotic/ErrorEstimateOrder_2D_CG_Triangle_RD_btest.cppedittest/system/Asymptotic/ErrorEstimateOrder_2D_CG_Triangle_AD_btest.cppsrc/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.h37fcdfa4c35a4c774b2490f59eb973b98b7681911648473391000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFix compile warnings 2022-03-28 09:16:31 -040037fcdfa4c35a4c774b2490f59eb973b98b768191Fix compile warningseditsrc/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.htest/unit/UnitGrids/XField2D_Box_Triangle_Lagrange_X1_btest.cpptest/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cpptest/unit/UnitGrids/XField2D_Duct_Triangle_Lagrange_Xq.cpptest/unit/Discretization/Galerkin/JacobianFunctionalBoundaryTrace_WeightedResidual_Galerkin_btest.cppsrc/pde/NS/OutputEuler3D.hsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_Stabilized.htest/unit/UnitGrids/XField2D_Annulus_Triangle_Lagrange_Xq.cppsrc/LinearAlgebra/SparseLinAlg/SparseLinAlg_LinearSolver.cppsrc/Discretization/Galerkin/FunctionalBoundaryTrace_Galerkin.htest/unit/UnitGrids/XField2D_Box_Triangle_Lagrange_X1.cppsrc/Field/Partition/LagrangeElementGroup.cppsrc/Field/Partition/XField_Lagrange_impl.htest/unit/Discretization/Galerkin/FunctionalBoundaryTrace_Galerkin_btest.cpptest/unit/UnitGrids/XField2D_Box_Triangle_Lagrange_X1.hsrc/Discretization/Galerkin/JacobianFunctionalInteriorTrace_Galerkin.hsrc/UserInterfaces/BodyForceSolver_impl.hsrc/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.hsrc/Field/Partition/XField_Lagrange_balance_impl.hsrc/Discretization/Galerkin/FunctionalInteriorTrace_Galerkin.hbde6ef24298f93bc54de098f80d648e75b0d22bb1648577577000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduRevert MechanicalPower calculation. Fix InteriorTrace partitioning for JacobianFunctionalInteriorTrace. Fixes for body force optimization. 2022-03-29 14:12:57 -0400bde6ef24298f93bc54de098f80d648e75b0d22bbRevert MechanicalPower calculation. Fix InteriorTrace partitioning for JacobianFunctionalInteriorTrace. Fixes for body force optimization.editsrc/UserInterfaces/BodyForceSolver_impl.heditsrc/Discretization/Galerkin/FunctionalBoundaryTrace_Galerkin.heditsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_Stabilized.heditsrc/LinearAlgebra/SparseLinAlg/SparseLinAlg_LinearSolver.cppedittest/unit/Discretization/Galerkin/JacobianFunctionalBoundaryTrace_WeightedResidual_Galerkin_btest.cppeditsrc/Field/Partition/LagrangeElementGroup.cppedittest/unit/UnitGrids/XField2D_Box_Triangle_Lagrange_X1.hedittest/unit/UnitGrids/XField2D_Box_Triangle_Lagrange_X1_btest.cppeditsrc/Field/Partition/XField_Lagrange_impl.heditsrc/Discretization/Galerkin/FunctionalInteriorTrace_Galerkin.heditsrc/Field/Partition/XField_Lagrange_balance_impl.heditsrc/Discretization/Galerkin/JacobianFunctionalInteriorTrace_Galerkin.hedittest/unit/UnitGrids/XField2D_Annulus_Triangle_Lagrange_Xq.cppedittest/unit/UnitGrids/XField2D_Duct_Triangle_Lagrange_Xq.cppeditsrc/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.hedittest/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cppeditsrc/pde/NS/OutputEuler3D.hedittest/unit/Discretization/Galerkin/FunctionalBoundaryTrace_Galerkin_btest.cppedittest/unit/UnitGrids/XField2D_Box_Triangle_Lagrange_X1.cpptest/unit/pde/NS/Q3DPrimitiveSurrogate_btest.cpptest/unit/pde/NS/Q2DPrimitiveSurrogate_btest.cppsrc/pde/NS/Q1DPrimitiveSurrogate.hsrc/pde/NS/Q3DPrimitiveSurrogate.htest/unit/pde/NS/Q1DPrimitiveSurrogate_btest.cppsrc/pde/NS/Q2DPrimitiveSurrogate.h4a37f030f737e328bccbfd02f4bc0325e433be3a1648581290000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduUse consistent limited gradients in PrimitiveSurrogate_btest 2022-03-29 15:14:50 -04004a37f030f737e328bccbfd02f4bc0325e433be3aUse consistent limited gradients in PrimitiveSurrogate_btesteditsrc/pde/NS/Q3DPrimitiveSurrogate.hedittest/unit/pde/NS/Q1DPrimitiveSurrogate_btest.cppedittest/unit/pde/NS/Q3DPrimitiveSurrogate_btest.cppedittest/unit/pde/NS/Q2DPrimitiveSurrogate_btest.cppeditsrc/pde/NS/Q1DPrimitiveSurrogate.heditsrc/pde/NS/Q2DPrimitiveSurrogate.htest/unit/UnitGrids/XField2D_Annulus_Triangle_Lagrange_Xq.cpptest/unit/UnitGrids/XField2D_Duct_Triangle_Lagrange_Xq.cpp89d70e27e91884fc5b94505bbbf7bcab8d8596d91648590557000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFix warnings 2022-03-29 17:49:17 -040089d70e27e91884fc5b94505bbbf7bcab8d8596d9Fix warningsedittest/unit/UnitGrids/XField2D_Annulus_Triangle_Lagrange_Xq.cppedittest/unit/UnitGrids/XField2D_Duct_Triangle_Lagrange_Xq.cppsrc/UserInterfaces/BodyForceSolver_impl.h34da3d0d2b4b30b4fa74aeb9c1497330440dc01d1648689230000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduVerbose output for computing BodyForce gradients 2022-03-30 21:13:50 -040034da3d0d2b4b30b4fa74aeb9c1497330440dc01dVerbose output for computing BodyForce gradientseditsrc/UserInterfaces/BodyForceSolver_impl.htest/unit/Field/HField_CG_btest.cpptest/unit/Field/HField_DG_btest.cppsrc/Field/HField/HField_DG/HField_DG_impl.h669e90aeffac09596ddbe092a78750c46470d8f81648831935000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduCompile fix for using grid laplacian 2022-04-01 12:52:15 -0400669e90aeffac09596ddbe092a78750c46470d8f8Compile fix for using grid laplacianedittest/unit/Field/HField_CG_btest.cppeditsrc/Field/HField/HField_DG/HField_DG_impl.hedittest/unit/Field/HField_DG_btest.cppsrc/Adaptation/MOESS/TAO/ImpliedMetric_Optimizer_TAO/ImpliedMetric_Optimizer_TAO_impl.hsrc/Adaptation/MOESS/TAO/MOESS_SANS_Optimizer_TAO/MOESS_SANS_Optimizer_TAO_impl.h88ff5210662785acd6ff70a0a416674c40e655de1648852483000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFix PETSc/TAO deprecation warnings 2022-04-01 18:34:43 -040088ff5210662785acd6ff70a0a416674c40e655deFix PETSc/TAO deprecation warningseditsrc/Adaptation/MOESS/TAO/MOESS_SANS_Optimizer_TAO/MOESS_SANS_Optimizer_TAO_impl.heditsrc/Adaptation/MOESS/TAO/ImpliedMetric_Optimizer_TAO/ImpliedMetric_Optimizer_TAO_impl.htest/sandbox/Adapt2D_VMSDBR2_RANSSA_Supersonic_AV_HTC_toy.cppf6e9cc6eef5abc5d34c91bc8bf7b60819c2f4d2d1648923683000https://acdl.mit.edu/csi/user/waligurawaligurawaligura@mit.eduUpdate to supersonic test case 2022-04-02 14:21:23 -0400f6e9cc6eef5abc5d34c91bc8bf7b60819c2f4d2dUpdate to supersonic test caseedittest/sandbox/Adapt2D_VMSDBR2_RANSSA_Supersonic_AV_HTC_toy.cpptest/sandbox/Adapt2D_VMSDBR2_RANSSA_Supersonic_AV_HTC_toy.cppffbb5323c0a8a087eace22853fb77775cc68c1bd1648933500000https://acdl.mit.edu/csi/user/waligurawaligurawaligura@mit.eduWorking supersonic case for develop 2022-04-02 17:05:00 -0400ffbb5323c0a8a087eace22853fb77775cc68c1bdWorking supersonic case for developedittest/sandbox/Adapt2D_VMSDBR2_RANSSA_Supersonic_AV_HTC_toy.cpptest/sandbox/Adapt2D_VMSDBR2_RANSSA_Supersonic_AV_HTC_toy.cpp65513c5e44307666de0bc540acf3d9811eeafe5f1648956378000https://acdl.mit.edu/csi/user/waligurawaligurawaligura@mit.eduTry again to see if tests time out 2022-04-02 23:26:18 -040065513c5e44307666de0bc540acf3d9811eeafe5fTry again to see if tests time outedittest/sandbox/Adapt2D_VMSDBR2_RANSSA_Supersonic_AV_HTC_toy.cppgithttps://acdl.mit.edu/csi/user/galbramcgalbramchttps://acdl.mit.edu/csi/user/waligurawaliguraStarted by upstream project "SANS_avro" build number 6666SANS_avrojob/SANS_avro/66e19c47a63fbbd9f771ed0066b6481693f301e089e19c47a63fbbd9f771ed0066b6481693f301e089acdl/develope19c47a63fbbd9f771ed0066b6481693f301e089e19c47a63fbbd9f771ed0066b6481693f301e089acdl/develope19c47a63fbbd9f771ed0066b6481693f301e089e19c47a63fbbd9f771ed0066b6481693f301e089acdl/developssh://jenkins@acdl.mit.edu/home/svnroot/SANSproto/false#66330438760752SANS_avro » release_clang,reynolds #6666falsefalse66234653SUCCESS1648192458750https://acdl.mit.edu/csi/job/SANS_avro/builddir=release_clang,buildnode=reynolds/66/reynoldsgitStarted by upstream project "SANS_avro" build number 6565SANS_avrojob/SANS_avro/65e19c47a63fbbd9f771ed0066b6481693f301e089e19c47a63fbbd9f771ed0066b6481693f301e089acdl/develope19c47a63fbbd9f771ed0066b6481693f301e089e19c47a63fbbd9f771ed0066b6481693f301e089acdl/develope19c47a63fbbd9f771ed0066b6481693f301e089e19c47a63fbbd9f771ed0066b6481693f301e089acdl/developssh://jenkins@acdl.mit.edu/home/svnroot/SANSproto/false#651985110760752SANS_avro » release_clang,reynolds #6565falsefalse65234393SUCCESS1648150622725https://acdl.mit.edu/csi/job/SANS_avro/builddir=release_clang,buildnode=reynolds/65/reynoldssrc/pde/AnalyticFunction/ScalarFunction1D.hsrc/pde/AnalyticFunction/ScalarFunction1D.cpptest/sandbox/Adapt2D_DGBR2_AD_ST_Burgers_toy.cpptest/unit/pde/AnalyticFunction/ScalarFunction1D_btest.cpptest/unit/IO/pde/ScalarFunction1D_pattern.txt29cfc19bf9c017c15a335cf0bc124f6b4f4c1df11642014535000https://acdl.mit.edu/csi/user/cwomackcwomackcwomack@mit.eduImplementing N wave problem for Burgers using Advection Diffusion 2022-01-12 14:08:55 -050029cfc19bf9c017c15a335cf0bc124f6b4f4c1df1Implementing N wave problem for Burgers using Advection Diffusionedittest/unit/pde/AnalyticFunction/ScalarFunction1D_btest.cppaddtest/sandbox/Adapt2D_DGBR2_AD_ST_Burgers_toy.cppedittest/unit/IO/pde/ScalarFunction1D_pattern.txteditsrc/pde/AnalyticFunction/ScalarFunction1D.cppeditsrc/pde/AnalyticFunction/ScalarFunction1D.htest/sandbox/Adapt2D_DGBR2_AD_ST_Burgers_toy.cpp7b272f19a48d743da6354a1d303d2858617fd3f61642014830000https://acdl.mit.edu/csi/user/cwomackcwomackcwomack@mit.eduRemoved one variable. 2022-01-12 14:13:50 -05007b272f19a48d743da6354a1d303d2858617fd3f6Removed one variable.edittest/sandbox/Adapt2D_DGBR2_AD_ST_Burgers_toy.cpptest/sandbox/Adapt2D_DGBR2_Burgers_ST_toy.cpptest/sandbox/Adapt2D_DGBR2_AD_ST_Burgers_toy.cppb0d11d0aa5e0d478cf675d29a85dc3d94cdb31a31642085329000https://acdl.mit.edu/csi/user/cwomackcwomackcwomack@mit.eduAdded Darmofal changes to Nwave code. 2022-01-13 09:48:49 -0500b0d11d0aa5e0d478cf675d29a85dc3d94cdb31a3Added Darmofal changes to Nwave code.edittest/sandbox/Adapt2D_DGBR2_Burgers_ST_toy.cppedittest/sandbox/Adapt2D_DGBR2_AD_ST_Burgers_toy.cppsrc/pde/AdvectionDiffusion/OutputAdvectionDiffusion1D.hsrc/pde/AnalyticFunction/ScalarFunction1D.h014a150b890229d45515d15f0c44d7bb647ea7d81642097946000https://acdl.mit.edu/csi/user/cwomackcwomackcwomack@mit.eduMore changes 2022-01-13 13:19:06 -0500014a150b890229d45515d15f0c44d7bb647ea7d8More changeseditsrc/pde/AdvectionDiffusion/OutputAdvectionDiffusion1D.heditsrc/pde/AnalyticFunction/ScalarFunction1D.hsrc/pde/NDConvert/OutputNDConvertSpaceTime1D.h735e1bdae86365e9d18bbd742ef3195d8cae8c9e1642106673000https://acdl.mit.edu/csi/user/cwomackcwomackcwomack@mit.eduChanged OutputNDConvert to match Dave's 2022-01-13 15:44:33 -0500735e1bdae86365e9d18bbd742ef3195d8cae8c9eChanged OutputNDConvert to match Dave'seditsrc/pde/NDConvert/OutputNDConvertSpaceTime1D.hsrc/pde/AdvectionDiffusion/BCAdvectionDiffusion1D.cppsrc/pde/BCParameters.htest/sandbox/Adapt2D_DGBR2_AD_ST_Burgers_toy.cppsrc/pde/Burgers/BCBurgers1D.cppsrc/pde/Burgers/BCBurgers1D.hsrc/pde/AdvectionDiffusion/BCAdvectionDiffusion1D.h1048cfcdb034b6194d0914fadab4bb1bc7f2b7171642183344000https://acdl.mit.edu/csi/user/cwomackcwomackcwomack@mit.eduAdded mitStateSpaceTime BC for 1D Advection Diffusion 2022-01-14 13:02:24 -05001048cfcdb034b6194d0914fadab4bb1bc7f2b717Added mitStateSpaceTime BC for 1D Advection Diffusioneditsrc/pde/BCParameters.heditsrc/pde/Burgers/BCBurgers1D.hedittest/sandbox/Adapt2D_DGBR2_AD_ST_Burgers_toy.cppeditsrc/pde/Burgers/BCBurgers1D.cppeditsrc/pde/AdvectionDiffusion/BCAdvectionDiffusion1D.heditsrc/pde/AdvectionDiffusion/BCAdvectionDiffusion1D.cppsrc/pde/AdvectionDiffusion/BCAdvectionDiffusionType.hsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_AdvectionDiffusion1D_ALBDUSUG.cppsrc/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_AdvectionDiffusion1D_ALBDUSUG.cppsrc/Discretization/CMakeLists.txtsrc/pde/AnalyticFunction/ScalarFunction1D.htest/sandbox/Adapt2D_DGBR2_AD_Burgers_ST_toy.cppsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_AdvectionDiffusion1D_ALaxDUSU.cppsrc/ErrorEstimate/CMakeLists.txttest/sandbox/Adapt2D_DGBR2_AD_ST_Burgers_toy.cppd17c57a040d03bea236e20a82d9fd23403cc44de1642694449000https://acdl.mit.edu/csi/user/cwomackcwomackcwomack@mit.eduMore changes to get Nwave boom propagation working 2022-01-20 11:00:49 -0500d17c57a040d03bea236e20a82d9fd23403cc44deMore changes to get Nwave boom propagation workingeditsrc/pde/AnalyticFunction/ScalarFunction1D.heditsrc/ErrorEstimate/CMakeLists.txtaddsrc/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_AdvectionDiffusion1D_ALBDUSUG.cppeditsrc/Discretization/CMakeLists.txtaddsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_AdvectionDiffusion1D_ALBDUSUG.cppaddtest/sandbox/Adapt2D_DGBR2_AD_Burgers_ST_toy.cppdeletetest/sandbox/Adapt2D_DGBR2_AD_ST_Burgers_toy.cppeditsrc/pde/AdvectionDiffusion/BCAdvectionDiffusionType.hdeletesrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_AdvectionDiffusion1D_ALaxDUSU.cppsrc/pde/AnalyticFunction/ScalarFunction1D.htest/unit/pde/AnalyticFunction/ScalarFunction1D_btest.cppc5e3d8e589e36cb641836adecb22bba823320cf51642696568000https://acdl.mit.edu/csi/user/cwomackcwomackcwomack@mit.eduRedid unit test for nwave 2022-01-20 11:36:08 -0500c5e3d8e589e36cb641836adecb22bba823320cf5Redid unit test for nwaveeditsrc/pde/AnalyticFunction/ScalarFunction1D.hedittest/unit/pde/AnalyticFunction/ScalarFunction1D_btest.cpptest/unit/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_3D_btest.cpp5e3ffaf66ed807f1b84f3d4395908e143e5582561643041897000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edujust renaming 2022-01-24 11:31:37 -05005e3ffaf66ed807f1b84f3d4395908e143e558256just renamingedittest/unit/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_3D_btest.cppsrc/pde/IBL/ElementProjectionOutputIBL3D.hf18fc739019d2fba6be0352053c242f92bee89e41643151586000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduadd derivative calculation for IBL3 laminar eigen-analysis 2022-01-25 17:59:46 -0500f18fc739019d2fba6be0352053c242f92bee89e4add derivative calculation for IBL3 laminar eigen-analysiseditsrc/pde/IBL/ElementProjectionOutputIBL3D.htest/unit/LinearAlgebra/Heat1D_btest.hsrc/Meshing/libMeshb/libMeshb_Interface.htest/unit/Python/PyDict_btest.cpptest/unit/pde/FullPotential/PDEFullPotential3D_btest.cpp6d7212d0b2903d8bb05c31b6e4c45bdbb3d2ae8b1643172849000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduMore cppcheck fixes 2022-01-25 23:54:09 -05006d7212d0b2903d8bb05c31b6e4c45bdbb3d2ae8bMore cppcheck fixesedittest/unit/LinearAlgebra/Heat1D_btest.hedittest/unit/Python/PyDict_btest.cppedittest/unit/pde/FullPotential/PDEFullPotential3D_btest.cppeditsrc/Meshing/libMeshb/libMeshb_Interface.hsrc/Field/NormalField/ProfileLoss/ProfileLoss.cppsrc/UserInterfaces/BodyForceSolver.hsrc/UserInterfaces/PythonUI/PySANS_BodyForce.cppsrc/Meshing/EGADS/RotorSource/Rotor.hsrc/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.hsrc/UserInterfaces/BodyForceSolver_impl.hsrc/pde/NS/PDEEuler3D_RotorSource.hsrc/Meshing/EGADS/RotorSource/Rotor.cppsrc/Field/NormalField/ProfileLoss/ProfileLoss.hc0a692c77e3b4f67fef2eae36c264e613c43cbc21643213575000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduMore body force output functionals 2022-01-26 11:12:55 -0500c0a692c77e3b4f67fef2eae36c264e613c43cbc2More body force output functionalseditsrc/Meshing/EGADS/RotorSource/Rotor.cppeditsrc/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.heditsrc/Field/NormalField/ProfileLoss/ProfileLoss.cppeditsrc/UserInterfaces/BodyForceSolver_impl.heditsrc/UserInterfaces/BodyForceSolver.heditsrc/Meshing/EGADS/RotorSource/Rotor.heditsrc/pde/NS/PDEEuler3D_RotorSource.heditsrc/Field/NormalField/ProfileLoss/ProfileLoss.heditsrc/UserInterfaces/PythonUI/PySANS_BodyForce.cpptest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cpptest/unit/pde/IBL/ProjectToQauxi3D_btest.cpptest/unit/pde/IBL/PDEIBLFourEqn3D_btest.cppsrc/pde/IBL/PDEIBLFourEqn3D.htest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cppsrc/pde/IBL/FluidModels.htest/unit/IO/pde/IBL/PDEIBLFourEqn3D_pattern.txtsrc/pde/IBL/FluidModels.cpp33885a520f19aaf01a02b5ad3139138aad6328e71643227757000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduswitched to constant density gas model for IBL 2022-01-26 15:09:17 -050033885a520f19aaf01a02b5ad3139138aad6328e7switched to constant density gas model for IBLeditsrc/pde/IBL/FluidModels.hedittest/unit/pde/IBL/ProjectToQauxi3D_btest.cppedittest/unit/IO/pde/IBL/PDEIBLFourEqn3D_pattern.txtedittest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cppedittest/unit/pde/IBL/PDEIBLFourEqn3D_btest.cppeditsrc/pde/IBL/PDEIBLFourEqn3D.hedittest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cppeditsrc/pde/IBL/FluidModels.cpptest/sandbox/Solve2D_VMSD_Triangle_NavierStokes_Joukowski_ArtificialViscosity_toy.cpptest/sandbox/Adapt2D_VMSD_AD_ST_toy.cppsrc/pde/TCNE/PDETCNEEuler1D.htest/unit/pde/NS/PDEEuler3D_RotorSource_btest.cppsrc/pde/NS/PDERANSSA2D.hsrc/Discretization/VMSD/AlgebraicEquationSet_Local_VMSD_Linear.htest/sandbox/Solve3D_VMSD_RANSSA_OjedaMMS_toy.cppsrc/pde/NDConvert/PDENDConvertSpaceTime1D.htest/sandbox/Adapt3D_VMSD_RANSSA_CornerFlatPlate_toy.cppsrc/pde/AdvectionDiffusion/PDEAdvectionDiffusion1D.hsrc/Discretization/VMSD/IntegrandCell_VMSD_Output.hsrc/Discretization/VMSD/IntegrandBoundaryTrace_None_VMSD.hsrc/Discretization/VMSD/IntegrandBoundaryTrace_LinearScalar_mitLG_VMSD.htest/unit/Discretization/VMSD/ResidualCell_VMSD_AD_btest.cpptest/unit/ErrorEstimate/ErrorEstimateCell_VMSD_AD_btest.cppsrc/Discretization/VMSD/IntegrandBoundaryTrace_Flux_mitState_VMSD.htest/sandbox/Adapt3D_VMSDBR2_RANSSA_FlatPlate_toy.cppsrc/pde/ArtificialViscosity/AVSensor_ViscousFlux2D.htest/sandbox/Adapt2D_VMSD_RANSSA_AV_MultiElementAirfoil_Q1_toy.cppsrc/pde/NS/PDENavierStokes3D.hsrc/Discretization/VMSD/IntegrandBoundaryTrace_Dirichlet_mitLG_VMSD.hsrc/pde/NDConvert/PDENDConvertSpace2D.htest/unit/Discretization/VMSD/IntegrandCell_VMSD_NL_AD_btest.cppsrc/pde/NS/PDEEuler3D.hsrc/pde/Lorenz/PDELorenz.hsrc/Discretization/VMSD/IntegrandCell_VMSD.hsrc/pde/NS/PDERANSSA3D.hsrc/Discretization/VMSDBR2/AlgebraicEquationSet_VMSD_BR2.hsrc/ErrorEstimate/VMSD/ErrorEstimate_VMSD.htest/sandbox/Solve2D_VMSD_HOW5_VI2_toy.cpptest/sandbox/Adapt2D_VMSD_RANSSA_MultiElementAirfoil_Q1_refine_toy.cpptest/sandbox/Adapt2D_VMSD_RANSSA_MultiElementAirfoil_Q1_toy.cpptest/sandbox/Adapt2D_VMSD_RANSSA_AV_MultiElementAirfoil_toy.cpptest/sandbox/Solve2D_VMSD_HOW5_VI2_AV_toy.cpptest/unit/Discretization/VMSD/IntegrandTrace_VMSD_AD_btest.cpptest/sandbox/Adapt2D_VMSDBR2_RANSSA_MultiElementAirfoil_toy.cppsrc/pde/NS/PDENavierStokes2D.htest/sandbox/Adapt2D_VMSDBR2_RANSSA_AV_MultiElementAirfoil_toy.cppsrc/Adaptation/MOESS/SolverInterface_VMSD.hsrc/pde/SourceOnly/PDESourceOnly2D.htest/sandbox/Adapt3D_VMSDBR2_RANSSA_CornerFlatPlate_toy.cppsrc/pde/NS/PDEEuler2D.htest/sandbox/Solve2D_VMSD_HOW5_CI1_toy.cpptest/unit/Discretization/VMSD/JacobianCell_VMSD_AD_btest.cppsrc/pde/NDConvert/PDENDConvertSpace1D.hsrc/Discretization/VMSD/IntegrandTrace_VMSD_NL.hsrc/pde/AdvectionDiffusion/PDEAdvectionDiffusion3D.htest/sandbox/Adapt2D_VMSDBR2_RANSSA_MultiElementAirfoil_Q1_toy.cppsrc/pde/NDConvert/PDENDConvertSpaceTime3D.htest/unit/Discretization/VMSD/VMSD_AD.nbtest/sandbox/Adapt2D_VMSDBR2_RANSSA_AV_MultiElementAirfoil_Q1_toy.cppsrc/ErrorEstimate/VMSD/ErrorEstimate_VMSD_Linear.hsrc/pde/IncompressibleNS/PDEIncompressibleRANSSA1DChannel.htest/unit/pde/NS/PDERANSSA3D_btest.cpptest/sandbox/Adapt2D_VMSDBR2_AD_ST_toy.cppsrc/Discretization/VMSDBR2/IntegrandTrace_VMSD_BR2.hsrc/pde/SourceOnly/PDESourceOnly3D.hsrc/Adaptation/MOESS/SolverInterface_VMSD_BR2.hsrc/pde/NS/PDEEuler1D.htest/sandbox/Adapt2D_VMSD_RANSSA_MultiElementAirfoil_toy.cpptest/unit/pde/NS/PDERANSSA2D_btest.cppsrc/SolutionTrek/Continuation/Homotopy/PDEHomotopy.hsrc/Discretization/VMSD/IntegrandCell_VMSD_NL.htest/sandbox/Adapt2D_VMSD_Triangle_RANSSA_Joukowski_ArtificialViscosity_toy.cpptest/unit/Discretization/VMSD/IntegrandCell_VMSD_AD_btest.cppsrc/pde/AdvectionDiffusion/PDEAdvectionDiffusion2D.hsrc/Discretization/VMSD/IntegrandTrace_VMSD.htest/unit/Discretization/VMSD/IntegrandTrace_VMSD_NL_AD_btest.cppsrc/pde/NDConvert/PDENDConvertSpaceTime2D.hsrc/pde/NS/PDEEulermitAVDiffusion2D.hsrc/pde/ArtificialViscosity/PDEmitAVSensor2D.htest/system/CodeConsistency/VMSDBR2_BubbleModes_btest.cppsrc/Discretization/VMSD/IntegrandBoundaryTrace_LinearScalar_sansLG_VMSD.htest/sandbox/Adapt2D_VMSD_RANSSA_Joukowski_toy.cpptest/sandbox/Adapt2D_VMSDBR2_RANSSA_MultiElementAirfoil_Q1_refine_toy.cppsrc/pde/Burgers/PDEBurgers1D.hsrc/Discretization/VMSD/AlgebraicEquationSet_VMSD_Linear.hsrc/pde/PorousMedia/PDEBuckleyLeverett1D.htest/sandbox/Adapt3D_VMSD_RANSSA_FlatPlate_toy.cppsrc/Discretization/VMSD/IntegrandBoundaryTrace_Dirichlet_sansLG_VMSD.hsrc/Discretization/VMSD/AlgebraicEquationSet_VMSD.hsrc/pde/NDConvert/PDENDConvertSpace3D.h74ece2d9f63c85644d1a666a04101592fe9564a11643259030000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduRemove lienar VMSD and perturbed functions 2022-01-26 23:50:30 -050074ece2d9f63c85644d1a666a04101592fe9564a1Remove lienar VMSD and perturbed functionsedittest/unit/pde/NS/PDEEuler3D_RotorSource_btest.cppeditsrc/Discretization/VMSD/IntegrandBoundaryTrace_None_VMSD.hdeletetest/sandbox/Adapt3D_VMSD_RANSSA_FlatPlate_toy.cppeditsrc/Discretization/VMSD/AlgebraicEquationSet_VMSD.hedittest/sandbox/Adapt2D_VMSD_RANSSA_Joukowski_toy.cppeditsrc/Discretization/VMSD/IntegrandCell_VMSD_Output.heditsrc/pde/NS/PDERANSSA2D.hdeletetest/sandbox/Adapt2D_VMSD_RANSSA_MultiElementAirfoil_toy.cppedittest/sandbox/Adapt2D_VMSD_Triangle_RANSSA_Joukowski_ArtificialViscosity_toy.cppdeletesrc/ErrorEstimate/VMSD/ErrorEstimate_VMSD_Linear.heditsrc/ErrorEstimate/VMSD/ErrorEstimate_VMSD.hedittest/sandbox/Solve2D_VMSD_Triangle_NavierStokes_Joukowski_ArtificialViscosity_toy.cppaddtest/sandbox/Adapt3D_VMSDBR2_RANSSA_CornerFlatPlate_toy.cppaddtest/sandbox/Adapt2D_VMSDBR2_RANSSA_AV_MultiElementAirfoil_toy.cppeditsrc/Adaptation/MOESS/SolverInterface_VMSD_BR2.heditsrc/pde/NDConvert/PDENDConvertSpaceTime1D.heditsrc/pde/Lorenz/PDELorenz.hdeletetest/sandbox/Adapt2D_VMSD_RANSSA_MultiElementAirfoil_Q1_toy.cppedittest/sandbox/Solve2D_VMSD_HOW5_VI2_AV_toy.cppeditsrc/pde/TCNE/PDETCNEEuler1D.hedittest/unit/Discretization/VMSD/JacobianCell_VMSD_AD_btest.cppeditsrc/Discretization/VMSD/IntegrandTrace_VMSD_NL.heditsrc/pde/Burgers/PDEBurgers1D.heditsrc/pde/NDConvert/PDENDConvertSpaceTime3D.hdeletetest/sandbox/Adapt2D_VMSD_RANSSA_AV_MultiElementAirfoil_toy.cppedittest/unit/Discretization/VMSD/VMSD_AD.nbeditsrc/pde/NS/PDEEuler3D.haddtest/sandbox/Adapt2D_VMSDBR2_AD_ST_toy.cppedittest/unit/Discretization/VMSD/IntegrandCell_VMSD_NL_AD_btest.cppedittest/system/CodeConsistency/VMSDBR2_BubbleModes_btest.cppeditsrc/pde/ArtificialViscosity/PDEmitAVSensor2D.hedittest/unit/Discretization/VMSD/ResidualCell_VMSD_AD_btest.cppdeletetest/unit/Discretization/VMSD/IntegrandTrace_VMSD_AD_btest.cppeditsrc/Discretization/VMSD/IntegrandBoundaryTrace_LinearScalar_sansLG_VMSD.heditsrc/pde/IncompressibleNS/PDEIncompressibleRANSSA1DChannel.hedittest/unit/pde/NS/PDERANSSA2D_btest.cppeditsrc/Discretization/VMSD/IntegrandBoundaryTrace_Flux_mitState_VMSD.heditsrc/pde/ArtificialViscosity/AVSensor_ViscousFlux2D.hdeletetest/unit/Discretization/VMSD/IntegrandCell_VMSD_AD_btest.cppeditsrc/pde/AdvectionDiffusion/PDEAdvectionDiffusion3D.heditsrc/pde/NDConvert/PDENDConvertSpace2D.heditsrc/SolutionTrek/Continuation/Homotopy/PDEHomotopy.heditsrc/pde/NDConvert/PDENDConvertSpace1D.haddtest/sandbox/Adapt2D_VMSDBR2_RANSSA_MultiElementAirfoil_Q1_refine_toy.cppaddtest/sandbox/Adapt2D_VMSDBR2_RANSSA_MultiElementAirfoil_Q1_toy.cppeditsrc/pde/NS/PDEEulermitAVDiffusion2D.heditsrc/pde/NS/PDENavierStokes3D.hdeletesrc/Discretization/VMSD/AlgebraicEquationSet_Local_VMSD_Linear.hdeletesrc/Discretization/VMSD/AlgebraicEquationSet_VMSD_Linear.heditsrc/Discretization/VMSDBR2/IntegrandTrace_VMSD_BR2.heditsrc/pde/NDConvert/PDENDConvertSpace3D.heditsrc/pde/AdvectionDiffusion/PDEAdvectionDiffusion2D.heditsrc/pde/AdvectionDiffusion/PDEAdvectionDiffusion1D.hdeletesrc/Discretization/VMSD/IntegrandCell_VMSD.heditsrc/pde/SourceOnly/PDESourceOnly3D.heditsrc/Discretization/VMSD/IntegrandBoundaryTrace_Dirichlet_mitLG_VMSD.heditsrc/Discretization/VMSD/IntegrandCell_VMSD_NL.hedittest/sandbox/Solve3D_VMSD_RANSSA_OjedaMMS_toy.cppeditsrc/pde/NS/PDEEuler2D.hdeletetest/sandbox/Adapt2D_VMSD_RANSSA_AV_MultiElementAirfoil_Q1_toy.cppaddtest/sandbox/Adapt2D_VMSDBR2_RANSSA_AV_MultiElementAirfoil_Q1_toy.cppaddtest/sandbox/Adapt2D_VMSDBR2_RANSSA_MultiElementAirfoil_toy.cppedittest/unit/pde/NS/PDERANSSA3D_btest.cppeditsrc/Discretization/VMSDBR2/AlgebraicEquationSet_VMSD_BR2.heditsrc/pde/PorousMedia/PDEBuckleyLeverett1D.hdeletetest/sandbox/Adapt2D_VMSD_RANSSA_MultiElementAirfoil_Q1_refine_toy.cppedittest/unit/ErrorEstimate/ErrorEstimateCell_VMSD_AD_btest.cppeditsrc/Adaptation/MOESS/SolverInterface_VMSD.heditsrc/pde/NS/PDENavierStokes2D.hedittest/sandbox/Solve2D_VMSD_HOW5_VI2_toy.cppedittest/unit/Discretization/VMSD/IntegrandTrace_VMSD_NL_AD_btest.cppeditsrc/pde/NS/PDERANSSA3D.hedittest/sandbox/Solve2D_VMSD_HOW5_CI1_toy.cppeditsrc/pde/NDConvert/PDENDConvertSpaceTime2D.heditsrc/Discretization/VMSD/IntegrandBoundaryTrace_Dirichlet_sansLG_VMSD.hdeletesrc/Discretization/VMSD/IntegrandTrace_VMSD.heditsrc/pde/SourceOnly/PDESourceOnly2D.haddtest/sandbox/Adapt3D_VMSDBR2_RANSSA_FlatPlate_toy.cppeditsrc/Discretization/VMSD/IntegrandBoundaryTrace_LinearScalar_mitLG_VMSD.hdeletetest/sandbox/Adapt2D_VMSD_AD_ST_toy.cppeditsrc/pde/NS/PDEEuler1D.hdeletetest/sandbox/Adapt3D_VMSD_RANSSA_CornerFlatPlate_toy.cpptest/unit/Discretization/VMSD/AlgebraicEquationSet_VMSD_Triangle_AD_btest.cppb754f9923c5c6817f6065b1768f43d99e84ae3c91643302208000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduRelax tolerance 2022-01-27 11:50:08 -0500b754f9923c5c6817f6065b1768f43d99e84ae3c9Relax toleranceedittest/unit/Discretization/VMSD/AlgebraicEquationSet_VMSD_Triangle_AD_btest.cppsrc/pde/sansBOOM/AtmosphereStandard.htest/unit/pde/sansBOOM/CMakeLists.txttest/unit/pde/CMakeLists.txtsrc/pde/CMakeLists.txttest/unit/pde/sansBOOM/AtmosphereStandard_btest.cppsrc/pde/sansBOOM/CMakeLists.txtbdface5c8f3413f5f3fea0d14be583f6852fffc21643309176000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.eduadded sansBOOM PDE directories; added standard atmosphere 2022-01-27 10:46:16 -0800bdface5c8f3413f5f3fea0d14be583f6852fffc2added sansBOOM PDE directories; added standard atmosphereaddsrc/pde/sansBOOM/AtmosphereStandard.haddsrc/pde/sansBOOM/CMakeLists.txteditsrc/pde/CMakeLists.txtaddtest/unit/pde/sansBOOM/CMakeLists.txtedittest/unit/pde/CMakeLists.txtaddtest/unit/pde/sansBOOM/AtmosphereStandard_btest.cppsrc/Discretization/VMSD/IntegrandTrace_VMSD_NL.hsrc/Discretization/VMSD/IntegrandCell_VMSD_NL.htest/unit/Discretization/VMSD/IntegrandCell_VMSD_AD_btest.cppsrc/Discretization/VMSD/IntegrandCell_VMSD.hsrc/Discretization/VMSD/IntegrandTrace_VMSD.hsrc/ErrorEstimate/VMSD/ErrorEstimate_VMSD.hsrc/Discretization/VMSD/Integrand_VMSD_fwd.htest/unit/Discretization/VMSD/IntegrandTrace_VMSD_NL_AD_btest.cpptest/unit/Discretization/VMSD/ResidualCell_VMSD_AD_btest.cpptest/unit/ErrorEstimate/ErrorEstimateCell_VMSD_AD_btest.cpptest/unit/Discretization/VMSD/IntegrandTrace_VMSD_AD_btest.cpptest/unit/Discretization/VMSD/IntegrandCell_VMSD_NL_AD_btest.cppsrc/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.hsrc/Discretization/VMSD/AlgebraicEquationSet_VMSD.htest/unit/Discretization/VMSD/JacobianCell_VMSD_AD_btest.cpp8a6160c1b52b4b2e86035162d3a8b912e71d172d1643343941000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduRemove _NL VMSD suffix 2022-01-27 23:25:41 -05008a6160c1b52b4b2e86035162d3a8b912e71d172dRemove _NL VMSD suffixedittest/unit/Discretization/VMSD/JacobianCell_VMSD_AD_btest.cppaddsrc/Discretization/VMSD/IntegrandCell_VMSD.haddtest/unit/Discretization/VMSD/IntegrandTrace_VMSD_AD_btest.cppaddsrc/Discretization/VMSD/IntegrandTrace_VMSD.hdeletesrc/Discretization/VMSD/IntegrandTrace_VMSD_NL.heditsrc/ErrorEstimate/VMSD/ErrorEstimate_VMSD.heditsrc/Discretization/VMSD/AlgebraicEquationSet_VMSD.hdeletetest/unit/Discretization/VMSD/IntegrandCell_VMSD_NL_AD_btest.cppedittest/unit/Discretization/VMSD/ResidualCell_VMSD_AD_btest.cppdeletesrc/Discretization/VMSD/IntegrandCell_VMSD_NL.haddtest/unit/Discretization/VMSD/IntegrandCell_VMSD_AD_btest.cppeditsrc/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.heditsrc/Discretization/VMSD/Integrand_VMSD_fwd.hdeletetest/unit/Discretization/VMSD/IntegrandTrace_VMSD_NL_AD_btest.cppedittest/unit/ErrorEstimate/ErrorEstimateCell_VMSD_AD_btest.cpptest/unit/Discretization/Block/CMakeLists.txt92aca5b4e348f011b8350c091701128d37fd3c0c1643386122000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduRelax timing 2022-01-28 11:08:42 -050092aca5b4e348f011b8350c091701128d37fd3c0cRelax timingedittest/unit/Discretization/Block/CMakeLists.txtsrc/pde/sansBOOM/AtmosphereStandard.h2982f1a9ad9e825c891cabc67128469f8fa18bb31643388660000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.edufixed vera squawk 2022-01-28 08:51:00 -08002982f1a9ad9e825c891cabc67128469f8fa18bb3fixed vera squawkeditsrc/pde/sansBOOM/AtmosphereStandard.htest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cpptest/system/AnalyticSolve/AnalyticSolve3D_IBLFourEqn_StagnationFlow_LamiBL_Triangle_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cppf711432476a277aabfddeb0fe12295fc25c53df21643389161000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edurefactoring to to keep up with the constant-density gas model in IBL3 2022-01-28 11:59:21 -0500f711432476a277aabfddeb0fe12295fc25c53df2refactoring to to keep up with the constant-density gas model in IBL3edittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cppedittest/system/AnalyticSolve/AnalyticSolve3D_IBLFourEqn_StagnationFlow_LamiBL_Triangle_btest.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppsrc/UserInterfaces/BodyForceSolver_impl.hcb38fb40f5bd1316f8d3ada0324da42cb5a3e6c01643399849000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduEnable output functionals on BodyForce LE/TE surfaces 2022-01-28 14:57:29 -0500cb38fb40f5bd1316f8d3ada0324da42cb5a3e6c0Enable output functionals on BodyForce LE/TE surfaceseditsrc/UserInterfaces/BodyForceSolver_impl.htest/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cpptest/unit/pde/NS/PDEEuler3D_RotorSource_btest.cpptest/unit/pde/NS/PDEEulermitAVDiffusion3D_RotorSource_btest.cppsrc/Meshing/EGADS/RotorSource/Rotor.hsrc/UserInterfaces/BodyForceSolver_impl.hsrc/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.hsrc/pde/NS/PDEEuler3D_RotorSource.hsrc/Meshing/EGADS/RotorSource/Rotor.cppfa873d2986a241689e9da3b9242677a07e2411931643408979000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFix body force relative output functionals 2022-01-28 17:29:39 -0500fa873d2986a241689e9da3b9242677a07e241193Fix body force relative output functionalsedittest/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cppeditsrc/pde/NS/PDEEuler3D_RotorSource.heditsrc/UserInterfaces/BodyForceSolver_impl.heditsrc/Meshing/EGADS/RotorSource/Rotor.cppeditsrc/Meshing/EGADS/RotorSource/Rotor.heditsrc/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.hedittest/unit/pde/NS/PDEEuler3D_RotorSource_btest.cppedittest/unit/pde/NS/PDEEulermitAVDiffusion3D_RotorSource_btest.cpptest/unit/Field/Project_DG_to_CG_btest.cppfe6f54962aba67aef301b52bb2daf19c84ded3b41643487199000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduRelax tolerance 2022-01-29 15:13:19 -0500fe6f54962aba67aef301b52bb2daf19c84ded3b4Relax toleranceedittest/unit/Field/Project_DG_to_CG_btest.cpptest/unit/Field/Project_DG_to_CG_btest.cpp925f9134900b8e99e552da0b2e542cc8cbfd82fc1643500689000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduRealxer tolerance 2022-01-29 18:58:09 -0500925f9134900b8e99e552da0b2e542cc8cbfd82fcRealxer toleranceedittest/unit/Field/Project_DG_to_CG_btest.cpptest/sandbox/Solve3D_Uncoupled_IBLFourEqn_FlatPlate_StagnationRadial_toy.cpptest/sandbox/Solve3D_Uncoupled_IBLFourEqn_FlatPlate_Blasius_toy.cpptest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_ring_toy.cpptest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cpp70d3b58d4035369f0441efd34635924ae2ff147b1643562050000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edumore refactoring to to keep up with the constant-density gas model in IBL3 2022-01-30 12:00:50 -050070d3b58d4035369f0441efd34635924ae2ff147bmore refactoring to to keep up with the constant-density gas model in IBL3edittest/sandbox/Solve3D_Uncoupled_IBLFourEqn_FlatPlate_Blasius_toy.cppedittest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_ring_toy.cppedittest/sandbox/Solve3D_Uncoupled_IBLFourEqn_FlatPlate_StagnationRadial_toy.cppedittest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cpptest/unit/pde/NS/PDERANSSA2D_btest.cppsrc/pde/NS/SATurbModel.hsrc/pde/NS/PDERANSSA2D.h13addd5d53ba88c7273a23eb70204be75a1e65c51643611678000https://acdl.mit.edu/csi/user/waligurawaligurawaligura@mit.eduTurbulence model constructor and unit test formatting changes. Functional SA-Catris models and framework for SA-LRe and SA-R models as well. 2022-01-31 01:47:58 -050013addd5d53ba88c7273a23eb70204be75a1e65c5Turbulence model constructor and unit test formatting changes. Functional SA-Catris models and framework for SA-LRe and SA-R models as well.addsrc/pde/NS/SATurbModel.heditsrc/pde/NS/PDERANSSA2D.hedittest/unit/pde/NS/PDERANSSA2D_btest.cpptest/sandbox/Solve3D_Uncoupled_IBLFourEqn_FlatPlate_StagnationRadial_toy.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cpp8c2bbebbab4c7489dcebdc6d455624bf104706911643645686000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduminor compile error/warning fix 2022-01-31 11:14:46 -05008c2bbebbab4c7489dcebdc6d455624bf10470691minor compile error/warning fixedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cppedittest/sandbox/Solve3D_Uncoupled_IBLFourEqn_FlatPlate_StagnationRadial_toy.cppsrc/pde/ArtificialViscosity/PDEmitAVSensorInner2D.hsrc/pde/IBL/PDEIBL3D.hsrc/Discretization/VMSDBR2/AlgebraicEquationSet_Local_VMSD_BR2.hsrc/pde/NS/PDERANSSA_Source3D.hsrc/pde/TCNE/PDETCNEEuler1D.hsrc/pde/NS/PDERANSSA2D.hsrc/pde/NDConvert/PDENDConvertSpaceTime1D.hsrc/pde/ArtificialViscosity/PDEmitAVSensor3D.hsrc/pde/PorousMedia/PDEBuckleyLeverett_ArtificialViscosity1D.hsrc/ErrorEstimate/VMSD/ErrorEstimateBase_VMSD.cppsrc/pde/Sensor/PDESensorParameter1D.htest/system/CodeConsistency/PDEmitAVDiffusionOuter2D_Consistency_btest.cppsrc/pde/AdvectionDiffusion/PDEAdvectionDiffusion1D.hsrc/pde/NS/PDERANSSA_Brenner2D.hsrc/pde/NS/PDEEulermitAVDiffusion3D.hsrc/pde/FullPotential/PDELinearizedIncompressiblePotential3D.hsrc/pde/HSM/PDEHSM2D.htest/unit/SolutionTrek/Ricatti_btest.hsrc/ErrorEstimate/VMSD/ErrorEstimateBase_VMSD.hsrc/pde/NS/PDENavierStokes3D.hsrc/pde/NDConvert/PDENDConvertSpace2D.hsrc/pde/IBL/PDEIBLFourEqn3D.hsrc/pde/NS/PDEEuler3D.hsrc/pde/Lorenz/PDELorenz.hsrc/pde/ShallowWater/PDEShallowWater1D.hsrc/pde/Burgers/PDEBurgers2D.hsrc/pde/ArtificialViscosity/AVSensor_Source2D.htest/sandbox/Adapt2D_VMSDBR2_NavierStokes_LaminarJoukowski_AV_HTC_toy.cppsrc/pde/CauchyRiemann/PDECauchyRiemann2D.hsrc/pde/Distance/PDEEikonal_Distance2D.htest/sandbox/Solve2D_VMSDBR2_RANSSA_Joukowski_HTC_toy.cppscripts/vera/exclusions.txtsrc/pde/NS/BCEulermitAVDiffusion2D.hsrc/pde/NS/PDERANSSA3D.hsrc/pde/NS/BCEulermitAVSensor2D.hsrc/pde/PorousMedia/PDETwoPhase2D.hsrc/Discretization/VMSDBR2/AlgebraicEquationSet_VMSD_BR2.htest/system/LocalSolve/Constrained_Solve_btest.cpptest/system/CodeConsistency/PDEmitAVSensor2D_Consistency_btest.cppsrc/pde/Sensor/PDESensorParameter2D.hsrc/pde/HSM/PDEHSMKL.hsrc/pde/Burgers/PDEBurgers_ArtificialViscosity2D.hsrc/pde/IBL/ProjectToQauxi2D.hsrc/pde/PorousMedia/PDETwoPhase_ArtificialViscosity1D.hsrc/pde/NS/PDENavierStokes2D.hsrc/pde/SourceOnly/PDESourceOnly2D.hsrc/pde/NS/PDERANSSA_Source2D.hsrc/Adaptation/MOESS/SolverInterface.hsrc/pde/NS/PDEEuler2D.hsrc/Discretization/AlgebraicEquationSet_Type.hsrc/pde/NDConvert/PDENDConvertSpace1D.hsrc/pde/Stokes/PDEStokes2D.hsrc/pde/AdvectionDiffusion/PDEAdvectionDiffusion3D.hsrc/pde/NDConvert/PDENDConvertSpaceTime3D.hsrc/Adaptation/MOESS/SolverInterfaceBase.hsrc/pde/PorousMedia/PDETwoPhase1D.hsrc/pde/FullPotential/PDEFullPotential3D.hsrc/pde/ArtificialViscosity/PDEmitAVSensor1D.hsrc/Discretization/VMSDBR2/SolutionData_VMSD_BR2.hsrc/ErrorEstimate/VMSD/ErrorEstimateBase_VMSD_BR2.cppsrc/pde/NS/PDEEulermitAVDiffusion1D.hsrc/pde/Burgers/PDEBurgers_ArtificialViscosity1D.hsrc/pde/NS/PDENavierStokes1D.hsrc/pde/IncompressibleNS/PDEIncompressibleNavierStokes1DChannel.hsrc/pde/IncompressibleNS/PDEIncompressibleRANSSA1DChannel.hsrc/ErrorEstimate/VMSD/ErrorEstimate_VMSD_BR2.hsrc/pde/PorousMedia/PDETwoPhase_ArtificialViscosity2D.hsrc/pde/IBL/ProjectToQauxi3D.hsrc/pde/IBL/PDEIBLUniField.htest/sandbox/Solve2D_VMSDBR2_Euler_RadialShock_AV_HTC_toy.cppsrc/pde/SourceOnly/PDESourceOnly3D.hsrc/pde/NS/PDEEuler3D_RotorSource.hsrc/pde/NS/PDEEuler1D.hsrc/Adaptation/MOESS/SolverInterface_VMSD_BR2.htest/system/CodeConsistency/PDEmitAVSensorInner2D_Consistency_btest.cppsrc/SolutionTrek/Continuation/Homotopy/PDEHomotopy.hsrc/pde/IBL/PDEIBL2D.hsrc/pde/AdvectionDiffusion/PDEAdvectionDiffusion2D.hsrc/pde/NDConvert/PDENDConvertSpaceTime2D.hsrc/pde/NS/PDEmitAVDiffusionOuter2D.hsrc/pde/NS/PDENavierStokes_Brenner2D.hsrc/pde/NS/PDEEulermitAVDiffusion2D.hsrc/pde/FullPotential/PDEIncompressiblePotentialTwoField2D.hsrc/pde/ArtificialViscosity/PDEmitAVSensor2D.hsrc/pde/FullPotential/PDELinearizedIncompressiblePotential2D.hsrc/pde/ArtificialViscosity/TraitsArtificialViscosity.hsrc/pde/PorousMedia/PDEBuckleyLeverett1D.hsrc/pde/Burgers/PDEBurgers1D.hsrc/pde/NS/PDEEuler1D_Source.hsrc/pde/IBL/PDEIBLSplitAmpLag2D.hsrc/pde/ShallowWater/PDEShallowWater2D_manifold.htest/sandbox/Solve2D_VMSDBR2_Euler_RadialShock_Corrected_AV_HTC_toy.cppsrc/pde/PorousMedia/PDETwoPhaseLinearized1D.hsrc/pde/ShallowWater/PDEShallowWater2D.hsrc/Field/ProjectSoln/Project_DG_to_CG/Project_DG_to_CG_impl.hsrc/pde/NDConvert/PDENDConvertSpace3D.h55e8edf2b5113a92ef569fbf0b65c3bc48b41b561643664425000https://acdl.mit.edu/csi/user/blscblscblsc@mit.eduPulling in updates for the asymptotically consistent error estimate in VMSD. PDEs have gained an additional typedef, the type of the consistent part of the PDE. This is just the PDEs type for almost all PDEs. New PDE types have been added for using the asymptotic consistency correction for Euler/NS/RANSSA with sensor based artificial diffusion (the originals have been retained for the time being). Updates to the problem interface and the error estimation classes for VMSDBR2 have also been made. Using the asymptotically consistent correction requires some additional data, but the interface for problems not needing that functionality are unchanged. 2022-01-31 16:27:05 -050055e8edf2b5113a92ef569fbf0b65c3bc48b41b56Pulling in updates for the asymptotically consistent error estimate in VMSD. PDEs have gained an additional typedef, the type of the consistent part of the PDE. This is just the PDEs type for almost all PDEs. New PDE types have been added for using the asymptotic consistency correction for Euler/NS/RANSSA with sensor based artificial diffusion (the originals have been retained for the time being). Updates to the problem interface and the error estimation classes for VMSDBR2 have also been made. Using the asymptotically consistent correction requires some additional data, but the interface for problems not needing that functionality are unchanged.editsrc/pde/Burgers/PDEBurgers_ArtificialViscosity1D.heditsrc/pde/Burgers/PDEBurgers_ArtificialViscosity2D.heditsrc/pde/IBL/PDEIBL3D.heditsrc/pde/NS/PDEEulermitAVDiffusion2D.heditsrc/Discretization/VMSDBR2/SolutionData_VMSD_BR2.hedittest/system/LocalSolve/Constrained_Solve_btest.cppeditsrc/pde/FullPotential/PDELinearizedIncompressiblePotential3D.heditsrc/pde/NS/PDERANSSA_Source2D.heditsrc/pde/NS/PDEEuler1D.hedittest/sandbox/Solve2D_VMSDBR2_RANSSA_Joukowski_HTC_toy.cppaddsrc/pde/NS/PDEmitAVDiffusionOuter2D.heditsrc/pde/FullPotential/PDEFullPotential3D.heditsrc/pde/AdvectionDiffusion/PDEAdvectionDiffusion2D.heditsrc/pde/NS/PDERANSSA2D.heditsrc/pde/NS/PDEEuler1D_Source.heditsrc/pde/NS/PDERANSSA_Brenner2D.heditsrc/pde/ArtificialViscosity/PDEmitAVSensor2D.heditsrc/pde/NS/PDENavierStokes3D.heditsrc/pde/NS/PDEEuler3D_RotorSource.heditsrc/SolutionTrek/Continuation/Homotopy/PDEHomotopy.heditsrc/pde/FullPotential/PDELinearizedIncompressiblePotential2D.heditsrc/pde/NS/PDENavierStokes2D.heditsrc/Adaptation/MOESS/SolverInterface.hedittest/unit/SolutionTrek/Ricatti_btest.heditsrc/pde/Sensor/PDESensorParameter1D.heditsrc/pde/PorousMedia/PDETwoPhase1D.heditsrc/pde/IBL/PDEIBL2D.heditsrc/pde/SourceOnly/PDESourceOnly2D.heditsrc/pde/Lorenz/PDELorenz.heditsrc/pde/ShallowWater/PDEShallowWater1D.hedittest/system/CodeConsistency/PDEmitAVSensor2D_Consistency_btest.cppeditsrc/pde/IBL/ProjectToQauxi2D.heditsrc/pde/NS/PDENavierStokes_Brenner2D.heditsrc/pde/NDConvert/PDENDConvertSpace3D.heditsrc/pde/NDConvert/PDENDConvertSpaceTime1D.heditsrc/pde/Burgers/PDEBurgers2D.haddtest/sandbox/Solve2D_VMSDBR2_Euler_RadialShock_AV_HTC_toy.cppeditsrc/pde/HSM/PDEHSMKL.heditsrc/pde/NS/PDEEuler2D.heditsrc/ErrorEstimate/VMSD/ErrorEstimateBase_VMSD_BR2.cppaddtest/sandbox/Solve2D_VMSDBR2_Euler_RadialShock_Corrected_AV_HTC_toy.cppeditscripts/vera/exclusions.txtaddsrc/pde/ArtificialViscosity/PDEmitAVSensorInner2D.heditsrc/pde/IBL/PDEIBLFourEqn3D.heditsrc/pde/NDConvert/PDENDConvertSpaceTime2D.heditsrc/pde/NDConvert/PDENDConvertSpace1D.heditsrc/pde/PorousMedia/PDETwoPhase_ArtificialViscosity2D.heditsrc/pde/IBL/PDEIBLSplitAmpLag2D.heditsrc/Adaptation/MOESS/SolverInterfaceBase.heditsrc/pde/PorousMedia/PDETwoPhase_ArtificialViscosity1D.heditsrc/pde/CauchyRiemann/PDECauchyRiemann2D.heditsrc/pde/NS/PDEEuler3D.heditsrc/pde/PorousMedia/PDEBuckleyLeverett1D.heditsrc/pde/ArtificialViscosity/TraitsArtificialViscosity.heditsrc/pde/Distance/PDEEikonal_Distance2D.heditsrc/pde/IBL/ProjectToQauxi3D.heditsrc/pde/NS/PDERANSSA_Source3D.heditsrc/pde/HSM/PDEHSM2D.heditsrc/pde/ArtificialViscosity/PDEmitAVSensor3D.heditsrc/pde/IncompressibleNS/PDEIncompressibleNavierStokes1DChannel.heditsrc/pde/TCNE/PDETCNEEuler1D.heditsrc/pde/Sensor/PDESensorParameter2D.heditsrc/Field/ProjectSoln/Project_DG_to_CG/Project_DG_to_CG_impl.heditsrc/pde/AdvectionDiffusion/PDEAdvectionDiffusion3D.heditsrc/pde/IBL/PDEIBLUniField.heditsrc/pde/ShallowWater/PDEShallowWater2D_manifold.heditsrc/pde/NS/PDEEulermitAVDiffusion1D.heditsrc/pde/Stokes/PDEStokes2D.heditsrc/pde/PorousMedia/PDETwoPhaseLinearized1D.heditsrc/pde/NS/BCEulermitAVDiffusion2D.heditsrc/ErrorEstimate/VMSD/ErrorEstimateBase_VMSD.heditsrc/pde/NS/BCEulermitAVSensor2D.heditsrc/pde/ShallowWater/PDEShallowWater2D.haddtest/system/CodeConsistency/PDEmitAVSensorInner2D_Consistency_btest.cppaddtest/system/CodeConsistency/PDEmitAVDiffusionOuter2D_Consistency_btest.cppeditsrc/pde/ArtificialViscosity/PDEmitAVSensor1D.heditsrc/ErrorEstimate/VMSD/ErrorEstimateBase_VMSD.cppeditsrc/pde/IncompressibleNS/PDEIncompressibleRANSSA1DChannel.heditsrc/pde/NDConvert/PDENDConvertSpaceTime3D.heditsrc/pde/NS/PDEEulermitAVDiffusion3D.heditsrc/pde/PorousMedia/PDETwoPhase2D.heditsrc/pde/ArtificialViscosity/AVSensor_Source2D.heditsrc/pde/NDConvert/PDENDConvertSpace2D.heditsrc/pde/AdvectionDiffusion/PDEAdvectionDiffusion1D.heditsrc/ErrorEstimate/VMSD/ErrorEstimate_VMSD_BR2.heditsrc/pde/NS/PDENavierStokes1D.heditsrc/pde/PorousMedia/PDEBuckleyLeverett_ArtificialViscosity1D.hedittest/sandbox/Adapt2D_VMSDBR2_NavierStokes_LaminarJoukowski_AV_HTC_toy.cppeditsrc/Discretization/VMSDBR2/AlgebraicEquationSet_Local_VMSD_BR2.heditsrc/pde/SourceOnly/PDESourceOnly3D.heditsrc/Discretization/VMSDBR2/AlgebraicEquationSet_VMSD_BR2.heditsrc/pde/Burgers/PDEBurgers1D.heditsrc/Adaptation/MOESS/SolverInterface_VMSD_BR2.heditsrc/pde/FullPotential/PDEIncompressiblePotentialTwoField2D.heditsrc/Discretization/AlgebraicEquationSet_Type.heditsrc/pde/NS/PDERANSSA3D.htest/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d1_p0_Test.txttest/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d1_p3_Test.txttest/system/AnalyticSolve/AnalyticSolve3D_IBLFourEqn_StagnationFlow_LamiBL_Triangle_btest.cpptest/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d2_p4_Test.txttest/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d2_p0_Test.txttest/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d2_p2_Test.txttest/sandbox/Solve3D_Uncoupled_IBLFourEqn_FlatPlate_StagnationRadial_toy.cpptest/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d1_p4_Test.txttest/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d1_p2_Test.txttest/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d1_p1_Test.txttest/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d2_p3_Test.txttest/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d2_p1_Test.txtcfe9d8ec3ef8b1f64677d7937dbb2c373677f8051643669016000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduupdated pyrite files 2022-01-31 17:43:36 -0500cfe9d8ec3ef8b1f64677d7937dbb2c373677f805updated pyrite filesedittest/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d1_p0_Test.txtedittest/sandbox/Solve3D_Uncoupled_IBLFourEqn_FlatPlate_StagnationRadial_toy.cppedittest/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d1_p3_Test.txtedittest/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d1_p2_Test.txtedittest/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d2_p0_Test.txtedittest/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d2_p2_Test.txtedittest/system/AnalyticSolve/AnalyticSolve3D_IBLFourEqn_StagnationFlow_LamiBL_Triangle_btest.cppedittest/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d2_p1_Test.txtedittest/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d2_p4_Test.txtedittest/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d1_p1_Test.txtedittest/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d2_p3_Test.txtedittest/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d1_p4_Test.txtsrc/pde/ArtificialViscosity/AVSensor_Source2D.h7ab8a4828ade838f3d2d0e5f9c36495c835c59571643678163000https://acdl.mit.edu/csi/user/blscblscblsc@mit.eduCleaned up AVSensor_Source2D.h a little bit to remove some unused code. 2022-01-31 20:16:03 -05007ab8a4828ade838f3d2d0e5f9c36495c835c5957Cleaned up AVSensor_Source2D.h a little bit to remove some unused code.editsrc/pde/ArtificialViscosity/AVSensor_Source2D.hsrc/pde/ArtificialViscosity/PDEmitAVSensorInner2D.h5e6e3d5e1563c9a69fb1a3679a62b3af5f86ff091643692640000https://acdl.mit.edu/csi/user/blscblscblsc@mit.eduMissed vera warning 2022-02-01 00:17:20 -05005e6e3d5e1563c9a69fb1a3679a62b3af5f86ff09Missed vera warningeditsrc/pde/ArtificialViscosity/PDEmitAVSensorInner2D.htest/system/AnalyticSolve/AnalyticSolve3D_IBLFourEqn_StagnationFlow_LamiBL_Triangle_btest.cpp7ff3709b7e112aac070af2427b8054b03eb42aa01643697187000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduForgot to turn off verbose and file output 2022-02-01 00:33:07 -06007ff3709b7e112aac070af2427b8054b03eb42aa0Forgot to turn off verbose and file outputedittest/system/AnalyticSolve/AnalyticSolve3D_IBLFourEqn_StagnationFlow_LamiBL_Triangle_btest.cpptest/sandbox/Solve2D_VMSDBR2_RANSSA_Joukowski_HTC_toy.cppc501da7813880c9e201e9ab062a2abe454dff8f91643719391000https://acdl.mit.edu/csi/user/blscblscblsc@mit.eduMissed another vera warning 2022-02-01 07:43:11 -0500c501da7813880c9e201e9ab062a2abe454dff8f9Missed another vera warningedittest/sandbox/Solve2D_VMSDBR2_RANSSA_Joukowski_HTC_toy.cpptest/unit/Field/Project_DG_to_CG_btest.cpp1bd64504ca773d32bc058d092b9984caeecd1ea21643731783000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edurelaxed tolerance 2022-02-01 10:09:43 -06001bd64504ca773d32bc058d092b9984caeecd1ea2relaxed toleranceedittest/unit/Field/Project_DG_to_CG_btest.cppsrc/Meshing/avro/XField_avro_2D.cpptest/unit/Meshing/avro/XField_avro_btest.cpp4441d38f312db161e2b3314fa4e8313bdd62152e1643837965000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFix so 2D avro works for wirebody 2022-02-02 16:39:25 -05004441d38f312db161e2b3314fa4e8313bdd62152eFix so 2D avro works for wirebodyedittest/unit/Meshing/avro/XField_avro_btest.cppeditsrc/Meshing/avro/XField_avro_2D.cpptest/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cpp9548628febbc2f4c1097f6d465436b99fc8bd82a1643868214000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduAdded a N-S case of laminar BL 2022-02-03 01:03:34 -05009548628febbc2f4c1097f6d465436b99fc8bd82aAdded a N-S case of laminar BLaddtest/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cppsrc/pde/NS/BCEuler2D_mitState.htest/sandbox/Adapt2D_VMSDBR2_NavierStokes_LaminarJoukowski_AV_HTC_toy.cppsrc/Adaptation/MOESS/SolverInterface_VMSD_BR2.h5041e3799d68611293a5298609f566aa597a5c971643981755000https://acdl.mit.edu/csi/user/blscblscblsc@mit.eduFixed the remaining clang and gnu11 compiler warnings. 2022-02-04 08:35:55 -05005041e3799d68611293a5298609f566aa597a5c97Fixed the remaining clang and gnu11 compiler warnings.edittest/sandbox/Adapt2D_VMSDBR2_NavierStokes_LaminarJoukowski_AV_HTC_toy.cppeditsrc/Adaptation/MOESS/SolverInterface_VMSD_BR2.heditsrc/pde/NS/BCEuler2D_mitState.htest/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cpptest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cppa31b52778cc9ae735e8a5f1745b1389811f7f1601644101748000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.educleaned up NS laminar BL sandbox case 2022-02-05 17:55:48 -0500a31b52778cc9ae735e8a5f1745b1389811f7f160cleaned up NS laminar BL sandbox caseedittest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cppedittest/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cppsrc/Field/ElementCounter.hsrc/Field/FindElementFromX.h99669cc9597ef09699dbc53acc68e05b45ac2cde1644104376000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduSeparated findElement() function into a dedicated file 2022-02-05 18:39:36 -050099669cc9597ef09699dbc53acc68e05b45ac2cdeSeparated findElement() function into a dedicated fileaddsrc/Field/FindElementFromX.heditsrc/Field/ElementCounter.hsrc/Field/FindElementFromX.htest/unit/Field/FindElementFromX_btest.cppf55bf54b9b245bc6988170af626d268eb527cfd61644169643000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduRefactored findTraceElement to use simple bounding box check without resorting to the kd-tree hammer... Added unit test 2022-02-06 12:47:23 -0500f55bf54b9b245bc6988170af626d268eb527cfd6Refactored findTraceElement to use simple bounding box check without resorting to the kd-tree hammer... Added unit testeditsrc/Field/FindElementFromX.haddtest/unit/Field/FindElementFromX_btest.cppsrc/pde/ArtificialViscosity/PDEmitAVSensorInner2D.hsrc/SolutionTrek/Continuation/Homotopy/BCHomotopy.htest/unit/SolutionTrek/Continuation/Homotopy_btest.cpptest/sandbox/Adapt3D_VMSDBR2_RANSSA_DPW_AV_HTC_toy.cppsrc/pde/NS/PDERANSSA2D.hsrc/tools/Tuple.htest/sandbox/Solve3D_VMSD_RANSSA_OjedaMMS_toy.cpptest/sandbox/Adapt2D_VMSDBR2_NavierStokes_LaminarJoukowski_AV_HTC_P1_2k_toy.cppsrc/pde/ArtificialViscosity/PDEmitAVSensor3D.htest/unit/pde/SourceOnly/CMakeLists.txttest/sandbox/Solve2D_VMSDBR2_HOW5_VI2_AV_HTC_toy.cpptest/sandbox/annulus_meshing_UROP_toy.cppsrc/pde/SourceOnly/BCSourceOnly2D.hsrc/pde/NS/PDEEulermitAVDiffusion3D.hsrc/Adaptation/MOESS/ParamFieldBuilder.htest/sandbox/ErrorOrder_2D_VMSD_Triangle_AD_toy.cppsrc/pde/NS/Q2DPrimitiveRhoPressure.hsrc/pde/NDConvert/PDENDConvertSpace2D.htest/system/CodeConsistency/PDEmitAVSensor2D_Consistency_afield_btest.cppsrc/pde/NS/PDEEuler3D.hsrc/SolutionTrek/Continuation/Continuation.htest/sandbox/Solve3D_VMSDBR2_BlottnerSphere_AV_HTC_toy.cpptest/sandbox/Adapt2D_VMSDBR2_NavierStokes_LaminarJoukowski_AV_HTC_toy.cpptest/sandbox/Solve2D_VMSDBR2_RANSSA_Joukowski_HTC_toy.cpptest/system/CodeConsistency/BCEulermitAVSensor2D_Consistency_afield_btest.cppsrc/pde/NS/PDERANSSA3D.htest/system/LocalSolve/Constrained_Solve_btest.cppsrc/NonLinearSolver/NewtonSolver_impl.htest/unit/Adaptation/MOESS/ParamFieldBuilder_btest.cpptest/unit/NonLinearSolver/NewtonSolver_btest.cppsrc/pde/NS/IsmailRoe.hsrc/Field/HField/GenHField_DG/GenHField_DG_impl.htest/system/CodeConsistency/PDEmitAVSensor2D_Consistency_RANSSA_afield_btest.cppsrc/pde/SourceOnly/PDESourceOnly2D.hsrc/SolutionTrek/Continuation/Continuation.cppsrc/pde/NS/PDEEuler2D.hsrc/Discretization/AlgebraicEquationSet_Type.htest/unit/pde/NS/PDEEuler2D_btest.cppsrc/pde/AdvectionDiffusion/PDEAdvectionDiffusion3D.hsrc/SolutionTrek/Continuation/Homotopy/AlgebraicEquationSet_HTC.hsrc/SolutionTrek/Continuation/CMakeLists.txttest/unit/SolutionTrek/Continuation/PDESourceOnly_btest.cpptest/unit/SolutionTrek/Continuation/DissipationBased_btest.cppsrc/pde/NS/Q2DEntropy.htest/unit/Discretization/VMSDBR2/ProjectL2_VMSD_BR2_Source_btest.cppsrc/pde/NS/Roe.hsrc/pde/NS/QRANSSA3D.htest/unit/pde/SourceOnly/PDESourceOnly3D_btest.cpptest/sandbox/Solve2D_VMSDBR2_Euler_RadialShock_AV_HTC_toy.cppsrc/pde/SourceOnly/PDESourceOnly3D.hsrc/pde/SourceOnly/CMakeLists.txttest/unit/pde/CMakeLists.txttest/system/CodeConsistency/PDESourceOnly_Projection_btest.cppsrc/Field/HField/GenHField_DG.hsrc/Adaptation/MOESS/SolverInterface_VMSD_BR2.htest/unit/pde/NS/PDERANSSA2D_btest.cppsrc/SolutionTrek/Continuation/Homotopy/PDEHomotopy.hsrc/SolutionTrek/Continuation/Homotopy/Homotopy.cpptest/sandbox/duct_meshing_UROP_toy.cpptest/system/CodeConsistency/BCEulermitAVSensor2D_Consistency_RANSSA_afield_btest.cppsrc/pde/AdvectionDiffusion/PDEAdvectionDiffusion2D.htest/sandbox/Adapt2D_VMSDBR2_NavierStokes_Blottner_Mach20_AV_HTC_toy.cppsrc/SolutionTrek/Continuation/Homotopy/PDESourceOnly.htest/unit/pde/FullPotential/PDELinearizedIncompressiblePotential3D_btest.cpptest/unit/pde/SourceOnly/PDESourceOnly2D_btest.cppsrc/LinearAlgebra/SparseLinAlg/SparseLinAlg_LinearSolver.cpptest/unit/SolutionTrek/Continuation/Homotopy_Euler_btest.cppsrc/pde/NS/PDEEulermitAVDiffusion2D.hsrc/pde/ArtificialViscosity/PDEmitAVSensor2D.hsrc/pde/NS/QRANSSA2D.htest/system/CodeConsistency/VMSDBR2_BubbleModes_btest.cppsrc/pde/NS/Q3DPrimitiveRhoPressure.htest/unit/pde/ArtificialViscosity/PDEmitAVSensor2D_btest.cpptest/unit/pde/NS/PDEEuler3D_btest.cppsrc/pde/CMakeLists.txttest/sandbox/Adapt2D_VMSD_RANSSA_Joukowski_toy.cpptest/sandbox/Solve2D_VMSDBR2_HOW5_VI2_Surface_AV_HTC_toy.cppsrc/pde/NS/Q3DEntropy.hsrc/SolutionTrek/Continuation/Homotopy/Homotopy.htest/sandbox/Solve2D_VMSDBR2_Euler_RadialShock_Corrected_AV_HTC_toy.cppsrc/Field/ProjectSoln/Project_DG_to_CG/Project_DG_to_CG_impl.htest/unit/pde/ArtificialViscosity/PDEmitAVSensor3D_btest.cppsrc/pde/NDConvert/PDENDConvertSpace3D.h59aee373b9d14e51e8557fd5ab22281f23af00fe1644177834000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduRefactor Homotopy so it can be used with any PDE 2022-02-06 15:03:54 -050059aee373b9d14e51e8557fd5ab22281f23af00feRefactor Homotopy so it can be used with any PDEeditsrc/pde/NS/PDEEulermitAVDiffusion2D.hedittest/sandbox/Adapt2D_VMSDBR2_NavierStokes_LaminarJoukowski_AV_HTC_P1_2k_toy.cppeditsrc/pde/NS/PDEEuler2D.hedittest/unit/pde/NS/PDEEuler2D_btest.cppedittest/sandbox/Solve3D_VMSDBR2_BlottnerSphere_AV_HTC_toy.cppdeletesrc/pde/SourceOnly/BCSourceOnly2D.hedittest/sandbox/Solve2D_VMSDBR2_HOW5_VI2_Surface_AV_HTC_toy.cppedittest/unit/Adaptation/MOESS/ParamFieldBuilder_btest.cppedittest/unit/pde/FullPotential/PDELinearizedIncompressiblePotential3D_btest.cppedittest/unit/Discretization/VMSDBR2/ProjectL2_VMSD_BR2_Source_btest.cppeditsrc/pde/NS/Roe.heditsrc/SolutionTrek/Continuation/Homotopy/AlgebraicEquationSet_HTC.hedittest/unit/SolutionTrek/Continuation/DissipationBased_btest.cppeditsrc/pde/AdvectionDiffusion/PDEAdvectionDiffusion2D.hdeletetest/unit/pde/SourceOnly/PDESourceOnly3D_btest.cppeditsrc/pde/ArtificialViscosity/PDEmitAVSensorInner2D.hdeletetest/unit/pde/SourceOnly/PDESourceOnly2D_btest.cppedittest/system/CodeConsistency/PDESourceOnly_Projection_btest.cppdeletesrc/pde/SourceOnly/CMakeLists.txteditsrc/pde/NS/PDERANSSA2D.hedittest/sandbox/Solve2D_VMSDBR2_HOW5_VI2_AV_HTC_toy.cppeditsrc/Field/HField/GenHField_DG.heditsrc/Field/HField/GenHField_DG/GenHField_DG_impl.heditsrc/LinearAlgebra/SparseLinAlg/SparseLinAlg_LinearSolver.cppeditsrc/pde/NS/Q2DEntropy.heditsrc/pde/AdvectionDiffusion/PDEAdvectionDiffusion3D.heditsrc/SolutionTrek/Continuation/CMakeLists.txteditsrc/pde/ArtificialViscosity/PDEmitAVSensor3D.heditsrc/SolutionTrek/Continuation/Homotopy/Homotopy.heditsrc/pde/NS/QRANSSA2D.hdeletetest/system/CodeConsistency/PDEmitAVSensor2D_Consistency_RANSSA_afield_btest.cppedittest/unit/NonLinearSolver/NewtonSolver_btest.cppedittest/unit/pde/CMakeLists.txtedittest/unit/pde/NS/PDEEuler3D_btest.cppdeletetest/sandbox/duct_meshing_UROP_toy.cppedittest/unit/pde/NS/PDERANSSA2D_btest.cppeditsrc/Discretization/AlgebraicEquationSet_Type.hedittest/sandbox/ErrorOrder_2D_VMSD_Triangle_AD_toy.cppedittest/sandbox/Solve2D_VMSDBR2_RANSSA_Joukowski_HTC_toy.cppeditsrc/SolutionTrek/Continuation/Homotopy/BCHomotopy.hdeletetest/unit/pde/SourceOnly/CMakeLists.txtedittest/sandbox/Solve2D_VMSDBR2_Euler_RadialShock_Corrected_AV_HTC_toy.cppedittest/system/CodeConsistency/VMSDBR2_BubbleModes_btest.cppaddsrc/SolutionTrek/Continuation/Homotopy/Homotopy.cppdeletetest/system/CodeConsistency/BCEulermitAVSensor2D_Consistency_afield_btest.cppeditsrc/pde/NS/PDERANSSA3D.heditsrc/pde/NS/Q2DPrimitiveRhoPressure.heditsrc/pde/NS/PDEEulermitAVDiffusion3D.heditsrc/tools/Tuple.heditsrc/pde/NS/Q3DEntropy.heditsrc/pde/NS/QRANSSA3D.heditsrc/pde/NS/IsmailRoe.hdeletetest/system/CodeConsistency/BCEulermitAVSensor2D_Consistency_RANSSA_afield_btest.cppedittest/unit/SolutionTrek/Continuation/Homotopy_btest.cppedittest/sandbox/Adapt2D_VMSD_RANSSA_Joukowski_toy.cppedittest/sandbox/Solve3D_VMSD_RANSSA_OjedaMMS_toy.cppdeletesrc/pde/SourceOnly/PDESourceOnly3D.hdeletetest/system/CodeConsistency/PDEmitAVSensor2D_Consistency_afield_btest.cppedittest/unit/pde/ArtificialViscosity/PDEmitAVSensor2D_btest.cppedittest/system/LocalSolve/Constrained_Solve_btest.cppedittest/unit/SolutionTrek/Continuation/Homotopy_Euler_btest.cppeditsrc/pde/NS/Q3DPrimitiveRhoPressure.heditsrc/pde/NDConvert/PDENDConvertSpace3D.heditsrc/pde/ArtificialViscosity/PDEmitAVSensor2D.heditsrc/pde/NS/PDEEuler3D.heditsrc/pde/NDConvert/PDENDConvertSpace2D.hedittest/sandbox/Solve2D_VMSDBR2_Euler_RadialShock_AV_HTC_toy.cppedittest/sandbox/Adapt3D_VMSDBR2_RANSSA_DPW_AV_HTC_toy.cppeditsrc/Adaptation/MOESS/SolverInterface_VMSD_BR2.hdeletetest/sandbox/annulus_meshing_UROP_toy.cppeditsrc/SolutionTrek/Continuation/Homotopy/PDEHomotopy.hdeletesrc/pde/SourceOnly/PDESourceOnly2D.haddsrc/SolutionTrek/Continuation/Homotopy/PDESourceOnly.heditsrc/Adaptation/MOESS/ParamFieldBuilder.heditsrc/Field/ProjectSoln/Project_DG_to_CG/Project_DG_to_CG_impl.heditsrc/SolutionTrek/Continuation/Continuation.cppedittest/unit/pde/ArtificialViscosity/PDEmitAVSensor3D_btest.cppeditsrc/NonLinearSolver/NewtonSolver_impl.hedittest/sandbox/Adapt2D_VMSDBR2_NavierStokes_LaminarJoukowski_AV_HTC_toy.cppaddtest/unit/SolutionTrek/Continuation/PDESourceOnly_btest.cppedittest/sandbox/Adapt2D_VMSDBR2_NavierStokes_Blottner_Mach20_AV_HTC_toy.cppeditsrc/SolutionTrek/Continuation/Continuation.heditsrc/pde/CMakeLists.txttest/system/CodeConsistency/PDESourceOnly_Projection_btest.cpp23819ca94297d67390558249504bad1540091ab81644203265000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFix warnings 2022-02-06 22:07:45 -050023819ca94297d67390558249504bad1540091ab8Fix warningsedittest/system/CodeConsistency/PDESourceOnly_Projection_btest.cpptest/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cpptest/unit/pde/NS/PDEEuler3D_RotorSource_btest.cpptest/unit/pde/NS/PDEEulermitAVDiffusion3D_RotorSource_btest.cppsrc/Meshing/EGADS/RotorSource/Rotor.hsrc/UserInterfaces/BodyForceSolver_impl.hsrc/pde/NS/PDEEuler3D_RotorSource.hsrc/Meshing/EGADS/RotorSource/Rotor.cpp3c6da366024e5c23cf5d3e25ca4df2f323a573de1644291508000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduExpose Viscous body force coefficients as user inputs 2022-02-07 22:38:28 -05003c6da366024e5c23cf5d3e25ca4df2f323a573deExpose Viscous body force coefficients as user inputseditsrc/Meshing/EGADS/RotorSource/Rotor.hedittest/unit/pde/NS/PDEEulermitAVDiffusion3D_RotorSource_btest.cppedittest/unit/pde/NS/PDEEuler3D_RotorSource_btest.cppeditsrc/Meshing/EGADS/RotorSource/Rotor.cppeditsrc/UserInterfaces/BodyForceSolver_impl.heditsrc/pde/NS/PDEEuler3D_RotorSource.hedittest/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cpptest/system/CodeConsistency/CMakeLists.txtscripts/jenkins/SANS_Nightly.sh1535d2c51c9dfd29defdfc3570b4cec036bd60141644330880000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduNightly fixes 2022-02-08 09:34:40 -05001535d2c51c9dfd29defdfc3570b4cec036bd6014Nightly fixeseditscripts/jenkins/SANS_Nightly.shedittest/system/CodeConsistency/CMakeLists.txttest/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cppsrc/Field/ProjectSoln/PointwiseSolutionStorage.cppb60bd332a435bd5bda08d736dddecad9c55bb9c81644336456000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduAdded BL profile extraction capability to a NS sandbox case 2022-02-08 11:07:36 -0500b60bd332a435bd5bda08d736dddecad9c55bb9c8Added BL profile extraction capability to a NS sandbox caseedittest/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cppeditsrc/Field/ProjectSoln/PointwiseSolutionStorage.cpptest/unit/UnitGrids/XField3D_FlatPlate_X1.htest/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cpptest/unit/UnitGrids/XField3D_CornerFlatPlate_X1.hsrc/Adaptation/MOESS/SolverInterface.hsrc/Discretization/VMSDBR2/SolutionData_VMSD_BR2.htest/unit/UnitGrids/XField3D_FlatPlate_X1.cpp3b37045f65badba57ef541486e2df0b28ee42df11644355298000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduRefactored 3D Tet flat plate grid. Added mutable access to AES in solver interface (but only able to use it by commenting out exception). More refactoring to NS laminar BL sandbox case 2022-02-08 16:21:38 -05003b37045f65badba57ef541486e2df0b28ee42df1Refactored 3D Tet flat plate grid. Added mutable access to AES in solver interface (but only able to use it by commenting out exception). More refactoring to NS laminar BL sandbox caseedittest/unit/UnitGrids/XField3D_FlatPlate_X1.cppedittest/unit/UnitGrids/XField3D_FlatPlate_X1.hedittest/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cppeditsrc/Adaptation/MOESS/SolverInterface.heditsrc/Discretization/VMSDBR2/SolutionData_VMSD_BR2.hedittest/unit/UnitGrids/XField3D_CornerFlatPlate_X1.htest/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cppc0d87f0b6710f24f05ef45b422a1e39d0194f6ca1644358748000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduminor cleanup of sandbox case 2022-02-08 17:19:08 -0500c0d87f0b6710f24f05ef45b422a1e39d0194f6caminor cleanup of sandbox caseedittest/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cpptest/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cpp1f9bbf3540a1f6af46d6b26aceb374aa193e88d41644362602000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edufixed warnings: size_t vs int 2022-02-08 18:23:22 -05001f9bbf3540a1f6af46d6b26aceb374aa193e88d4fixed warnings: size_t vs intedittest/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cpptest/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cpptest/unit/UnitGrids/XField3D_FlatPlate_X1.cpp73046f83c0bb6264ff231459b4c7bb5bbfdde1a61644364094000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduturned off projection between different grids when doing solution sequencing because it does not work due to (probably) a bug... 2022-02-08 18:48:14 -050073046f83c0bb6264ff231459b4c7bb5bbfdde1a6turned off projection between different grids when doing solution sequencing because it does not work due to (probably) a bug...edittest/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cppedittest/unit/UnitGrids/XField3D_FlatPlate_X1.cppsrc/UserInterfaces/BodyForceSolver_impl.hf7083fbcea0134d5bffb90b8530347d1af33247e1644367817000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFix mistake in body force 2022-02-08 19:50:17 -0500f7083fbcea0134d5bffb90b8530347d1af33247eFix mistake in body forceeditsrc/UserInterfaces/BodyForceSolver_impl.htest/unit/pde/NS/PDERANSSA2D_btest.cpptest/system/Asymptotic/ErrorOrder_2D_CGStabilized_RANS_MMS_btest.cppsrc/pde/NS/PDENavierStokes2D.hsrc/pde/NS/PDERANSSA2D.hsrc/pde/NS/SATurbModel.htest/system/Asymptotic/ErrorOrder_2D_DGBR2_RANS_MMS_btest.cpptest/sandbox/Solve2D_DGBR2_Triangle_RANSSA_OjedaMMS_toy.cpptest/unit/pde/NS/PDEEulermitAVDiffusion2D_RANSSA_btest.cpp34cff343e345bb681c4d2dc033396e914d0b97f91644369114000https://acdl.mit.edu/csi/user/waligurawaligurawaligura@mit.eduChange some QCR variable types in PDERANS and other formatting changes for successful make check. Updated PDERANS and b_test to be consistent with current changes on develop 2022-02-08 20:11:54 -050034cff343e345bb681c4d2dc033396e914d0b97f9Change some QCR variable types in PDERANS and other formatting changes for successful make check. Updated PDERANS and b_test to be consistent with current changes on developedittest/sandbox/Solve2D_DGBR2_Triangle_RANSSA_OjedaMMS_toy.cppedittest/unit/pde/NS/PDERANSSA2D_btest.cppedittest/system/Asymptotic/ErrorOrder_2D_CGStabilized_RANS_MMS_btest.cppeditsrc/pde/NS/PDENavierStokes2D.heditsrc/pde/NS/PDERANSSA2D.heditsrc/pde/NS/SATurbModel.hedittest/system/Asymptotic/ErrorOrder_2D_DGBR2_RANS_MMS_btest.cppedittest/unit/pde/NS/PDEEulermitAVDiffusion2D_RANSSA_btest.cpptest/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cpp756e7fe03c562ee9f88ec9c4ae6a192ba84f8f101644378394000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edufixed warnings: size_t vs int 2022-02-08 22:46:34 -0500756e7fe03c562ee9f88ec9c4ae6a192ba84f8f10fixed warnings: size_t vs intedittest/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cpptest/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cpp3c03a2e9a7af2c2aeda63b675d5f1fcdffaf7b3c1644378842000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edubug fix in user input 2022-02-08 22:54:02 -05003c03a2e9a7af2c2aeda63b675d5f1fcdffaf7b3cbug fix in user inputedittest/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cpptest/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cpp56959a5d3b62a7ba57fd215fd33e218c5f053aa71644384427000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edufixed style. minor tweak in PETSc setup in a test case 2022-02-09 00:27:07 -050056959a5d3b62a7ba57fd215fd33e218c5f053aa7fixed style. minor tweak in PETSc setup in a test caseedittest/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cpptest/unit/UnitGrids/XField3D_FlatPlate_X1.htest/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cpptest/unit/UnitGrids/XField3D_FlatPlate_X1.cppe5f436f3e982b30159f84e01f58e76b1891d295c1644392924000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduRefactored grid and test case for NS LamiBL 2022-02-09 02:48:44 -0500e5f436f3e982b30159f84e01f58e76b1891d295cRefactored grid and test case for NS LamiBLedittest/unit/UnitGrids/XField3D_FlatPlate_X1.cppedittest/unit/UnitGrids/XField3D_FlatPlate_X1.hedittest/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cpptest/unit/pde/NS/PDERANSSA2D_btest.cppsrc/pde/NS/PDERANSSA2D.h7ebc9e5b42b5758832995cd216f58e099092f6391644425130000https://acdl.mit.edu/csi/user/waligurawaligurawaligura@mit.eduChanges to diffusionViscous and diffusionViscousGradient unit tests to check Catris variations. Still working on the formatting but will push this version for now 2022-02-09 11:45:30 -05007ebc9e5b42b5758832995cd216f58e099092f639Changes to diffusionViscous and diffusionViscousGradient unit tests to check Catris variations. Still working on the formatting but will push this version for nowedittest/unit/pde/NS/PDERANSSA2D_btest.cppeditsrc/pde/NS/PDERANSSA2D.hsrc/pde/NS/PDERANSSA2D.hcab06f857f775a3b5d0b536dad318e4eb3183d751644431168000https://acdl.mit.edu/csi/user/waligurawaligurawaligura@mit.eduPushing again with vera changes. Something seems to be up with my vera check 2022-02-09 13:26:08 -0500cab06f857f775a3b5d0b536dad318e4eb3183d75Pushing again with vera changes. Something seems to be up with my vera checkeditsrc/pde/NS/PDERANSSA2D.hsrc/pde/NS/SATurbModel.h76b34287262ece0ba46a9331bfbf56bd3ad514021644436398000https://acdl.mit.edu/csi/user/waligurawaligurawaligura@mit.eduAnother vera message I did not see before sending 2022-02-09 14:53:18 -050076b34287262ece0ba46a9331bfbf56bd3ad51402Another vera message I did not see before sendingeditsrc/pde/NS/SATurbModel.htest/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cppsrc/Adaptation/MOESS/SolverInterface.h8ee448c146bce4fe3ecb68ff734bd07bbd76f4e51644437375000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduRelaxed convergence tolerance in a test case 2022-02-09 15:09:35 -05008ee448c146bce4fe3ecb68ff734bd07bbd76f4e5Relaxed convergence tolerance in a test caseedittest/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cppeditsrc/Adaptation/MOESS/SolverInterface.htest/unit/pde/NS/PDERANSSA2D_btest.cpptest/unit/pde/NS/PDEEulermitAVDiffusion2D_RANSSA_btest.cppsrc/pde/NS/PDERANSSA2D.hf9730cb20d975429a7fa357097623b8f4f1f41561644488742000https://acdl.mit.edu/csi/user/waligurawaligurawaligura@mit.eduFurther formatting changes to PDERANS and another vera error I missed initially 2022-02-10 05:25:42 -0500f9730cb20d975429a7fa357097623b8f4f1f4156Further formatting changes to PDERANS and another vera error I missed initiallyedittest/unit/pde/NS/PDEEulermitAVDiffusion2D_RANSSA_btest.cppedittest/unit/pde/NS/PDERANSSA2D_btest.cppeditsrc/pde/NS/PDERANSSA2D.htest/unit/pde/NS/PDERANSSA2D_btest.cppsrc/pde/NS/PDERANSSA2D.h7c64f75d5689f4270bd3bbb4c2058c3372ff8ba31644509268000https://acdl.mit.edu/csi/user/waligurawaligurawaligura@mit.eduFurther formatting changes fixing most of the alignment issues and getting rid of the -= 2022-02-10 11:07:48 -05007c64f75d5689f4270bd3bbb4c2058c3372ff8ba3Further formatting changes fixing most of the alignment issues and getting rid of the -=edittest/unit/pde/NS/PDERANSSA2D_btest.cppeditsrc/pde/NS/PDERANSSA2D.htest/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cppa2e502b913d3cd855bee2a598dfcfd9279f5f83b1644555665000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduRefactored BL sampling function in NS LamiBL test case 2022-02-11 00:01:05 -0500a2e502b913d3cd855bee2a598dfcfd9279f5f83bRefactored BL sampling function in NS LamiBL test caseedittest/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cpptest/unit/pde/NS/PDEEuler2D_btest.cppsrc/UserInterfaces/BodyForceSolver_impl.hsrc/Field/output_Tecplot/output_Tecplot_RotorSource.cppsrc/pde/NS/PDEEuler3D_RotorSource.h47b3eaff53576d33c72f84f42523fd42f57cd22b1644606665000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduAdd ddelta dump for RotorSource 2022-02-11 14:11:05 -050047b3eaff53576d33c72f84f42523fd42f57cd22bAdd ddelta dump for RotorSourceedittest/unit/pde/NS/PDEEuler2D_btest.cppeditsrc/Field/output_Tecplot/output_Tecplot_RotorSource.cppeditsrc/UserInterfaces/BodyForceSolver_impl.heditsrc/pde/NS/PDEEuler3D_RotorSource.hsrc/pde/NS/PDEEuler3D_RotorSource.h6d5d7af33b91dea5794e9ea6bbc01dd2d5dd5a841644607471000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFix warning 2022-02-11 14:24:31 -05006d5d7af33b91dea5794e9ea6bbc01dd2d5dd5a84Fix warningeditsrc/pde/NS/PDEEuler3D_RotorSource.htest/system/IO/ErrorOrder/ErrorOrder_1D_HDG_Burgers_MinTest.txttest/unit/Meshing/avro/XField_avro_btest.cppsrc/Discretization/HDG/AlgebraicEquationSet_HDG.htest/unit/IO/pde/ScalarFunction1D_pattern.txttest/unit/pde/AdvectionDiffusion/AdvectiveFlux1D_btest.cppsrc/pde/AdvectionDiffusion/AdvectiveFlux1D.hsrc/NonLinearSolver/LineUpdate/HalvingSearchLineUpdateParams.cpptest/system/BlockSolve/Block_1D_Decoupled_Burgers_btest.cppsrc/pde/AnalyticFunction/ScalarFunction1D.cppsrc/NonLinearSolver/LineUpdate/HalvingSearchLineUpdate.htest/unit/pde/AnalyticFunction/ScalarFunction1D_btest.cpptest/unit/Meshing/avro/MesherInterface_avro_btest.cppsrc/BasisFunction/BasisFunctionArea_Triangle_Lagrange.cpptest/unit/pde/AdvectionDiffusion/OutputAdvectionDiffusion_btest.cpptest/unit/NonLinearSolver/HalvingSearchLineUpdate_btest.cpptest/sandbox/Adapt2D_DGBR2_Burgers_ST_toy.cppsrc/Discretization/VMSDBR2/AlgebraicEquationSet_VMSD_BR2.htest/sandbox/Adapt2D_DGBR2_AD_Burgers_ST_toy.cppsrc/pde/AnalyticFunction/ScalarFunction1D.htest/system/IO/ErrorOrder/ErrorOrder_1D_HDG_Burgers_FullTest.txttest/unit/pde/Burgers/PDEBurgers_ArtificialViscosity1D_btest.cpptest/system/Asymptotic/ErrorOrder_1D_HDG_Burgers_btest.cpptest/system/IO/ErrorOrder/ErrorOrder_1D_DGBR2_Burgers_FullTest.txttest/unit/IO/NonLinearSolver/linesearch_residuals.dattest/unit/pde/AdvectionDiffusion/BCAdvectionDiffusion1D_btest.cpptest/system/IO/ErrorOrder/ErrorOrder_1D_DGBR2_Burgers_MinTest.txtsrc/NonLinearSolver/LineUpdate/HalvingSearchLineUpdate_impl.hsrc/pde/Burgers/PDEBurgers1D.htest/unit/pde/Burgers/PDEBurgers1D_btest.cpp4462d38d057b9b0ec6224c9ab674fc77398cdca11644607586000https://acdl.mit.edu/csi/user/cwomackcwomackcwomack@mit.eduWorking Changes: Finalized AD Burgers test case for boom propagation Added new mitStateSpaceTime BC and Nwave IC Added unit tests for new BC and IC Modified flux functions to use smooth math Modified meshing unit tests to check for tetgen Added new verbose functionality to HalvingLineSearchUpdate Broken Changes: Added p=0 funnctionality for Lagrange basis 2022-02-11 14:26:26 -05004462d38d057b9b0ec6224c9ab674fc77398cdca1Working Changes: Finalized AD Burgers test case for boom propagationedittest/system/BlockSolve/Block_1D_Decoupled_Burgers_btest.cppedittest/system/IO/ErrorOrder/ErrorOrder_1D_HDG_Burgers_MinTest.txtedittest/unit/pde/AdvectionDiffusion/AdvectiveFlux1D_btest.cppeditsrc/NonLinearSolver/LineUpdate/HalvingSearchLineUpdate_impl.heditsrc/pde/Burgers/PDEBurgers1D.hedittest/unit/Meshing/avro/XField_avro_btest.cppedittest/unit/pde/AnalyticFunction/ScalarFunction1D_btest.cppedittest/unit/IO/pde/ScalarFunction1D_pattern.txtedittest/unit/pde/AdvectionDiffusion/BCAdvectionDiffusion1D_btest.cppedittest/system/IO/ErrorOrder/ErrorOrder_1D_DGBR2_Burgers_FullTest.txteditsrc/pde/AdvectionDiffusion/AdvectiveFlux1D.heditsrc/NonLinearSolver/LineUpdate/HalvingSearchLineUpdate.hedittest/unit/IO/NonLinearSolver/linesearch_residuals.datedittest/unit/Meshing/avro/MesherInterface_avro_btest.cppedittest/unit/pde/AdvectionDiffusion/OutputAdvectionDiffusion_btest.cppeditsrc/NonLinearSolver/LineUpdate/HalvingSearchLineUpdateParams.cppedittest/unit/pde/Burgers/PDEBurgers1D_btest.cppedittest/unit/NonLinearSolver/HalvingSearchLineUpdate_btest.cppedittest/sandbox/Adapt2D_DGBR2_Burgers_ST_toy.cppedittest/sandbox/Adapt2D_DGBR2_AD_Burgers_ST_toy.cppedittest/system/IO/ErrorOrder/ErrorOrder_1D_HDG_Burgers_FullTest.txteditsrc/pde/AnalyticFunction/ScalarFunction1D.cppeditsrc/Discretization/HDG/AlgebraicEquationSet_HDG.hedittest/system/IO/ErrorOrder/ErrorOrder_1D_DGBR2_Burgers_MinTest.txteditsrc/BasisFunction/BasisFunctionArea_Triangle_Lagrange.cppedittest/unit/pde/Burgers/PDEBurgers_ArtificialViscosity1D_btest.cppedittest/system/Asymptotic/ErrorOrder_1D_HDG_Burgers_btest.cppeditsrc/Discretization/VMSDBR2/AlgebraicEquationSet_VMSD_BR2.heditsrc/pde/AnalyticFunction/ScalarFunction1D.htest/sandbox/Adapt2D_DGBR2_Triangle_RANSSA_Joukowski_Subsonic_ArtificialViscosity_toy.cppsrc/Discretization/VMSDBR2/ResidualBoundaryTrace_VMSD_BR2.htest/sandbox/Adapt2D_DGBR2_Triangle_RANSSA_RAE2822_ArtificialViscosity_toy.cpptest/unit/Python/PyDict_btest.cppc8c646cef331fd96b63bd5a54d113a5b34f926131644621670000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduSmall cleanup 2022-02-11 18:21:10 -0500c8c646cef331fd96b63bd5a54d113a5b34f92613Small cleanupeditsrc/Discretization/VMSDBR2/ResidualBoundaryTrace_VMSD_BR2.hedittest/sandbox/Adapt2D_DGBR2_Triangle_RANSSA_Joukowski_Subsonic_ArtificialViscosity_toy.cppedittest/sandbox/Adapt2D_DGBR2_Triangle_RANSSA_RAE2822_ArtificialViscosity_toy.cppedittest/unit/Python/PyDict_btest.cpptest/system/Asymptotic/ErrorEstimateOrder_2D_DGBR2_Triangle_AD_btest.cpptest/sandbox/Adapt2D_VMSDBR2_NavierStokes_LaminarJoukowski_AV_HTC_P1_2k_toy.cpptest/sandbox/Adapt2D_DGAdvective_Euler_Joukowski_Pointwise_toy.cpptest/unit/UnitGrids/XField2D_FlatPlate_X1_btest.cpptest/sandbox/Adapt2D_CGStabilized_Triangle_RANSSA_Joukowski_Transonic_ArtificialViscosity_toy.cpptest/sandbox/Solve2D_DGBR2_Triangle_NavierStokes_Joukowski_toy.cpptest/unit/Field/XField_BoundaryTrace_btest.cpptest/sandbox/Adapt2D_CGStabilized_Triangle_RANSSA_Joukowski_Subsonic_toy.cpptest/sandbox/Solve2D_L2Project_MOESS_toy.cpptest/unit/Field/XField_Lagrange_btest.cpptest/sandbox/Adapt2D_Galerkin_Stabilized_AR_toy.cpptest/sandbox/Adapt2D_L2Project_MOESS_toy.cpptest/unit/UnitGrids/XField2D_CubicSourceBump_Xq_btest.cppsrc/Field/CMakeLists.txttest/sandbox/Adapt2D_DGBR2_RANSSA_Joukowski_toy.cpptest/sandbox/Adapt1D_DGAdvective_Line_Euler_GilesPierce_toy.cppscripts/valgrind/Ubuntu.supptest/sandbox/Adapt2D_DGBR2_Poisson_toy.cpptest/sandbox/Adapt2D_DGBR2_Triangle_RANSSA_Joukowski_Subsonic_ArtificialViscosity_toy.cpptest/sandbox/Adapt2D_VMSDBR2_NavierStokes_LaminarJoukowski_AV_HTC_toy.cpptest/unit/UnitGrids/XField2D_GilesPierceNozzle_HACK_btest.cpptest/sandbox/Adapt2D_VMSDBR2_AD_DoubleBoundaryLayer_toy.cpptest/sandbox/Adapt2D_CGStabilized_Triangle_RANSSA_Joukowski_Subsonic_ArtificialViscosity_toy.cppsrc/Field/output_fluent.cpptest/sandbox/Adapt2D_Galerkin_Stabilized_AD_DoubleBoundaryLayer_toy.cpptest/system/Asymptotic/ErrorEstimateOrder_2D_HDG_Triangle_AD_btest.cppscripts/valgrind/valgrind-python.supptest/system/Asymptotic/ErrorOrder_2D_L2Project_Bernstein_btest.cpptest/unit/UnitGrids/XField3D_CornerFlatPlate_X1_btest.cpptest/sandbox/Adapt2D_CGStabilized_HOW5_CI1_ArtificialViscosity_toy.cpptest/sandbox/Solve2D_DGBR2_Triangle_RANSSA_Joukowski_toy.cpptest/sandbox/Adapt2D_DGBR2_L2_ASExp_toy.cpptest/sandbox/Adapt1D_Galerkin_Stabilized_AD_BoundaryLayer_toy.cpptest/sandbox/Adapt2D_DGBR2_Helmholtz_toy.cpptest/sandbox/Adapt2D_DGBR2_Triangle_RANSSA_NACA0012_ArtificialViscosity_toy.cpptest/sandbox/Adapt2D_VMSD_AD_DoubleBoundaryLayer_toy.cpptest/sandbox/Adapt2D_DGBR2_Triangle_RANSSA_Joukowski_Subsonic_toy.cpptest/sandbox/Adapt2D_Galerkin_Stabilized_Euler_CubicSource_toy.cppsrc/Field/output_grm.cpptest/system/Asymptotic/ErrorEstimateOrder_1D_DGBR2_Line_AD_btest.cpptest/sandbox/Adapt2D_DGBR2_AR_toy.cpptest/sandbox/Adapt2D_Galerkin_Stabilized_Helmholtz_toy.cppsrc/Field/output_grm.htest/unit/Meshing/EPIC/XField_PX_btest.cpptest/unit/UnitGrids/XField3D_FlatPlate_X1_btest.cpptest/sandbox/Adapt1D_DGBR2_Line_Euler_GilesPierce_toy.cpptest/sandbox/Adapt2D_DGBR2_Triangle_RANSSA_Joukowski_ArtificialViscosity_toy.cpptest/sandbox/Adapt2D_DGAdvective_Euler_CubicSource_toy.cpptest/unit/UnitGrids/XField2D_Duct_Triangle_Lagrange_Xq_btest.cpptest/sandbox/Adapt2D_CGStabilized_Triangle_RANSSA_Joukowski_ArtificialViscosity_toy.cpptest/sandbox/Adapt2D_VMSD_Triangle_RANSSA_Joukowski_ArtificialViscosity_toy.cpptest/sandbox/Adapt2D_VMSDBR2_NavierStokes_Blottner_Mach20_AV_HTC_toy.cpptest/sandbox/Adapt2D_DGBR2_Triangle_RANSSA_RAE2822_ArtificialViscosity_toy.cpptest/unit/Field/XField_Lagrange_Partition_btest.cpptest/sandbox/Adapt2D_Galerkin_Stabilized_AD_Pollutant_toy.cpptest/sandbox/Adapt2D_DGBR2_Triangle_RANSSA_Joukowski_Transonic_ArtificialViscosity_toy.cpptest/sandbox/Adapt1D_Galerkin_Stabilized_AR_toy.cppc0deb05f5d6a0c806e8b9a57c5f5988b7fc238171644625757000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduRemove output_grm 2022-02-11 19:29:17 -0500c0deb05f5d6a0c806e8b9a57c5f5988b7fc23817Remove output_grmedittest/sandbox/Adapt2D_DGBR2_Helmholtz_toy.cppedittest/sandbox/Adapt2D_Galerkin_Stabilized_AD_DoubleBoundaryLayer_toy.cppedittest/sandbox/Adapt2D_VMSDBR2_NavierStokes_LaminarJoukowski_AV_HTC_P1_2k_toy.cppedittest/sandbox/Adapt2D_DGBR2_Triangle_RANSSA_Joukowski_Subsonic_ArtificialViscosity_toy.cppedittest/system/Asymptotic/ErrorOrder_2D_L2Project_Bernstein_btest.cppdeletesrc/Field/output_grm.hedittest/sandbox/Adapt2D_DGBR2_L2_ASExp_toy.cppedittest/sandbox/Adapt2D_Galerkin_Stabilized_AR_toy.cppedittest/sandbox/Adapt2D_Galerkin_Stabilized_Euler_CubicSource_toy.cppeditscripts/valgrind/Ubuntu.suppedittest/sandbox/Solve2D_DGBR2_Triangle_RANSSA_Joukowski_toy.cppedittest/sandbox/Adapt1D_Galerkin_Stabilized_AD_BoundaryLayer_toy.cppedittest/unit/Field/XField_BoundaryTrace_btest.cppedittest/unit/UnitGrids/XField2D_GilesPierceNozzle_HACK_btest.cppedittest/sandbox/Adapt2D_CGStabilized_Triangle_RANSSA_Joukowski_Transonic_ArtificialViscosity_toy.cppedittest/sandbox/Adapt2D_DGAdvective_Euler_Joukowski_Pointwise_toy.cppedittest/sandbox/Adapt2D_VMSDBR2_AD_DoubleBoundaryLayer_toy.cppedittest/sandbox/Adapt2D_VMSDBR2_NavierStokes_LaminarJoukowski_AV_HTC_toy.cppedittest/sandbox/Adapt2D_CGStabilized_Triangle_RANSSA_Joukowski_ArtificialViscosity_toy.cppedittest/sandbox/Adapt2D_CGStabilized_Triangle_RANSSA_Joukowski_Subsonic_toy.cppedittest/system/Asymptotic/ErrorEstimateOrder_1D_DGBR2_Line_AD_btest.cppedittest/system/Asymptotic/ErrorEstimateOrder_2D_HDG_Triangle_AD_btest.cppedittest/unit/Field/XField_Lagrange_btest.cppedittest/sandbox/Adapt1D_DGAdvective_Line_Euler_GilesPierce_toy.cppedittest/system/Asymptotic/ErrorEstimateOrder_2D_DGBR2_Triangle_AD_btest.cppedittest/unit/Meshing/EPIC/XField_PX_btest.cppedittest/sandbox/Adapt2D_VMSD_AD_DoubleBoundaryLayer_toy.cppeditsrc/Field/CMakeLists.txtedittest/sandbox/Adapt2D_L2Project_MOESS_toy.cppedittest/sandbox/Adapt2D_CGStabilized_Triangle_RANSSA_Joukowski_Subsonic_ArtificialViscosity_toy.cppedittest/unit/UnitGrids/XField2D_Duct_Triangle_Lagrange_Xq_btest.cppedittest/sandbox/Adapt2D_DGBR2_Triangle_RANSSA_RAE2822_ArtificialViscosity_toy.cppedittest/sandbox/Adapt2D_DGBR2_Triangle_RANSSA_Joukowski_Transonic_ArtificialViscosity_toy.cppedittest/sandbox/Adapt2D_VMSD_Triangle_RANSSA_Joukowski_ArtificialViscosity_toy.cppeditscripts/valgrind/valgrind-python.suppedittest/sandbox/Adapt2D_Galerkin_Stabilized_AD_Pollutant_toy.cppedittest/sandbox/Adapt2D_Galerkin_Stabilized_Helmholtz_toy.cppedittest/sandbox/Adapt1D_Galerkin_Stabilized_AR_toy.cppedittest/sandbox/Adapt2D_DGBR2_Triangle_RANSSA_Joukowski_Subsonic_toy.cppedittest/sandbox/Adapt2D_CGStabilized_HOW5_CI1_ArtificialViscosity_toy.cppedittest/unit/UnitGrids/XField2D_FlatPlate_X1_btest.cppedittest/sandbox/Adapt2D_DGBR2_AR_toy.cppedittest/sandbox/Adapt2D_DGBR2_Triangle_RANSSA_NACA0012_ArtificialViscosity_toy.cppedittest/sandbox/Adapt1D_DGBR2_Line_Euler_GilesPierce_toy.cppedittest/sandbox/Adapt2D_DGBR2_RANSSA_Joukowski_toy.cppedittest/sandbox/Adapt2D_DGBR2_Triangle_RANSSA_Joukowski_ArtificialViscosity_toy.cppdeletesrc/Field/output_grm.cppedittest/sandbox/Solve2D_L2Project_MOESS_toy.cppedittest/unit/Field/XField_Lagrange_Partition_btest.cppedittest/unit/UnitGrids/XField2D_CubicSourceBump_Xq_btest.cppedittest/unit/UnitGrids/XField3D_CornerFlatPlate_X1_btest.cppedittest/sandbox/Adapt2D_DGBR2_Poisson_toy.cppedittest/sandbox/Adapt2D_VMSDBR2_NavierStokes_Blottner_Mach20_AV_HTC_toy.cppedittest/sandbox/Adapt2D_DGAdvective_Euler_CubicSource_toy.cppedittest/sandbox/Solve2D_DGBR2_Triangle_NavierStokes_Joukowski_toy.cppeditsrc/Field/output_fluent.cppedittest/unit/UnitGrids/XField3D_FlatPlate_X1_btest.cppsrc/pde/NS/SATurbModel.hsrc/pde/NS/PDERANSSA2D.h18ee730c21f262c1dc92ad591037ba9b259fc89a1644633326000https://acdl.mit.edu/csi/user/waligurawaligurawaligura@mit.eduWording changes to SATurbModel and shortening of nonc variables 2022-02-11 21:35:26 -050018ee730c21f262c1dc92ad591037ba9b259fc89aWording changes to SATurbModel and shortening of nonc variableseditsrc/pde/NS/SATurbModel.heditsrc/pde/NS/PDERANSSA2D.hsrc/Field/CMakeLists.txtsrc/Field/FindElementFromX.htest/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cppsrc/Field/FindElementFromX.cppae59941334df6d43f3362ce5dd954968952531bb1644633785000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduFixed long line. Separated functions into a cpp file 2022-02-11 20:43:05 -0600ae59941334df6d43f3362ce5dd954968952531bbFixed long line. Separated functions into a cpp fileeditsrc/Field/FindElementFromX.hedittest/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cppeditsrc/Field/CMakeLists.txtaddsrc/Field/FindElementFromX.cppsrc/Field/FindElementFromX.cppb4f372b520eb62d6ed7ae9c655cd578140d646391644734878000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduFixed compile and linker errors in findTraceElement(...) 2022-02-13 01:47:58 -0500b4f372b520eb62d6ed7ae9c655cd578140d64639Fixed compile and linker errors in findTraceElement(...)editsrc/Field/FindElementFromX.cpptest/unit/UnitGrids/XField3D_FlatPlate_X1.htest/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cpptest/unit/UnitGrids/XField3D_FlatPlate_X1.cpp57f7c9ede5193066fe768de3c350a088900f23841644736604000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduAdded support for S-shaped duct geomerty in flat plate grid in 3D 2022-02-13 02:16:44 -050057f7c9ede5193066fe768de3c350a088900f2384Added support for S-shaped duct geomerty in flat plate grid in 3Dedittest/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cppedittest/unit/UnitGrids/XField3D_FlatPlate_X1.cppedittest/unit/UnitGrids/XField3D_FlatPlate_X1.hsrc/pde/NS/PDERANSSA2D.h5fab44c58772e5dc3e090a1fac5254e82984953c1644774656000https://acdl.mit.edu/csi/user/waligurawaligurawaligura@mit.eduadding in the first go at untest SA_R and SA_LRe modifications for 2D. Also making sure all pushes are going through before moving on. 2022-02-13 12:50:56 -05005fab44c58772e5dc3e090a1fac5254e82984953cadding in the first go at untest SA_R and SA_LRe modifications for 2D. Also making sure all pushes are going through before moving on.editsrc/pde/NS/PDERANSSA2D.htest/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cpp5d1a35c2008608ddbf4f23d381b40be86597190c1644816247000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edufixed file I/O mode 2022-02-14 00:24:07 -05005d1a35c2008608ddbf4f23d381b40be86597190cfixed file I/O modeedittest/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cpptest/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cppd02c6503efc8196e8c179f9389d423e8e2d451271644851384000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduadded check for file I/O 2022-02-14 10:09:44 -0500d02c6503efc8196e8c179f9389d423e8e2d45127added check for file I/Oedittest/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cpptest/unit/UnitGrids/XField3D_Box_Hex_X1.cpptest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cpptest/unit/UnitGrids/XField3D_Box_Hex_X1.h1f77045b4b8bd13074be78f9a52a1ba48d98108b1644872823000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduAdded a sin duct geometry for IBL3 sandbox case 2022-02-14 16:07:03 -05001f77045b4b8bd13074be78f9a52a1ba48d98108bAdded a sin duct geometry for IBL3 sandbox caseedittest/unit/UnitGrids/XField3D_Box_Hex_X1.cppedittest/unit/UnitGrids/XField3D_Box_Hex_X1.hedittest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cpptest/unit/pde/sansBOOM/PDEsansBOOM_btest.cppsrc/pde/sansBOOM/PDEsansBOOM.hsrc/pde/sansBOOM/Traits_sansBOOM.h2432baf7dc628ef4dd9509da31b6a86d9be172761644897215000https://acdl.mit.edu/csi/user/darmofaldarmofaldarmofal@mit.eduInitial commit of sansBOOM PDE implementation with the advective and viscous terms defined 2022-02-14 20:53:35 -07002432baf7dc628ef4dd9509da31b6a86d9be17276Initial commit of sansBOOM PDE implementation with the advective and viscous terms definedaddsrc/pde/sansBOOM/PDEsansBOOM.haddsrc/pde/sansBOOM/Traits_sansBOOM.haddtest/unit/pde/sansBOOM/PDEsansBOOM_btest.cppsrc/pde/IBL/BCIBL2D.hsrc/pde/IBL/BCIBL3D.hsrc/Discretization/Galerkin/IntegrandBoundaryTrace_Flux_mitState_Galerkin_manifold.hsrc/pde/NDConvert/BCNDConvertSpace2D.hsrc/pde/NDConvert/BCNDConvertSpace3D.hd2b42e48d260f4a85d5c720aa6906020c1c693d81644898529000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edurefactored Flux_mitState BC implementation for IBL3 to use fluxNormal() instead of evaluating it in the integrand class 2022-02-14 23:15:29 -0500d2b42e48d260f4a85d5c720aa6906020c1c693d8refactored Flux_mitState BC implementation for IBL3 to use fluxNormal() instead of evaluating it in the integrand classeditsrc/Discretization/Galerkin/IntegrandBoundaryTrace_Flux_mitState_Galerkin_manifold.heditsrc/pde/IBL/BCIBL3D.heditsrc/pde/IBL/BCIBL2D.heditsrc/pde/NDConvert/BCNDConvertSpace2D.heditsrc/pde/NDConvert/BCNDConvertSpace3D.htest/unit/pde/NS/Q2DPrimitiveSurrogate_btest.cppsrc/pde/ArtificialViscosity/PDEmitAVSensor2D.hsrc/pde/NS/PDERANSSA2D.hsrc/pde/NS/Q2DPrimitiveSurrogate.h2af598e0ee7ee550c070d3e72863d80c2f7e139c1644901199000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduMinor fixes for artificial viscosity 2022-02-14 23:59:59 -05002af598e0ee7ee550c070d3e72863d80c2f7e139cMinor fixes for artificial viscosityedittest/unit/pde/NS/Q2DPrimitiveSurrogate_btest.cppeditsrc/pde/ArtificialViscosity/PDEmitAVSensor2D.heditsrc/pde/NS/Q2DPrimitiveSurrogate.heditsrc/pde/NS/PDERANSSA2D.htest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cppsrc/pde/IBL/BCIBL3D.hsrc/Discretization/isValidState/isValidStateBoundaryTrace_mitLG.h276402f6e4270878f2bd7dda639719379e63d7ff1644907878000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduTurned on mitLG Dirichlet BC for LIP-IBL3 case at inlet. Fixed buggy isValidState check that checks uninialized boundary state qB 2022-02-15 01:51:18 -0500276402f6e4270878f2bd7dda639719379e63d7ffTurned on mitLG Dirichlet BC for LIP-IBL3 case at inlet. Fixed buggy isValidState check that checks uninialized boundary state qBedittest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cppeditsrc/Discretization/isValidState/isValidStateBoundaryTrace_mitLG.heditsrc/pde/IBL/BCIBL3D.htest/sandbox/Adapt2D_DGBR2_sansBOOM_toy.cppsrc/pde/sansBOOM/BCsansBOOM.hsrc/pde/sansBOOM/BCsansBOOM.cpp107de534c1818574af41bfcf9b61a37fc60a01021644939271000https://acdl.mit.edu/csi/user/darmofaldarmofaldarmofal@mit.eduInitial implementation of sansBOOM BCs and Adapt2D_DGBR2_sansBOOM_toy 2022-02-15 08:34:31 -0700107de534c1818574af41bfcf9b61a37fc60a0102Initial implementation of sansBOOM BCs and Adapt2D_DGBR2_sansBOOM_toyaddtest/sandbox/Adapt2D_DGBR2_sansBOOM_toy.cppaddsrc/pde/sansBOOM/BCsansBOOM.haddsrc/pde/sansBOOM/BCsansBOOM.cppsrc/pde/IBL/BCIBL3D.h9201561f8ca9b2f32875b721cb7e251c81fc65961644963386000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduForgot to commit a few lines 2022-02-15 17:16:26 -05009201561f8ca9b2f32875b721cb7e251c81fc6596Forgot to commit a few lineseditsrc/pde/IBL/BCIBL3D.htest/sandbox/Adapt2D_DGBR2_sansBOOM_toy.cppsrc/pde/sansBOOM/BCsansBOOM.hsrc/pde/sansBOOM/PDEsansBOOM.hac8abdf400202b03ce14971fb30d1a952fd91d211645034773000https://acdl.mit.edu/csi/user/darmofaldarmofaldarmofal@mit.eduSome more edits to sansBOOM PDE/BC implementation 2022-02-16 11:06:13 -0700ac8abdf400202b03ce14971fb30d1a952fd91d21Some more edits to sansBOOM PDE/BC implementationedittest/sandbox/Adapt2D_DGBR2_sansBOOM_toy.cppeditsrc/pde/sansBOOM/BCsansBOOM.heditsrc/pde/sansBOOM/PDEsansBOOM.hsrc/pde/IBL/FluidModels.hsrc/pde/IBL/PDEIBLSplitAmpLag2D.h57e6aaa379fd9d617c0a555967b29a6a0729832f1645046134000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduChanged default xtr parameter in IBL transition model from max Real (causing floating point overflow error) to 1e5 2022-02-16 15:15:34 -060057e6aaa379fd9d617c0a555967b29a6a0729832fChanged default xtr parameter in IBL transition model from max Real (causing floating point overflow error) to 1e5editsrc/pde/IBL/FluidModels.heditsrc/pde/IBL/PDEIBLSplitAmpLag2D.htest/unit/pde/IBL/FluidModels_btest.cppsrc/Field/Element/GalerkinWeightedIntegral_New.htest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellForcedTransitionIBL_Panel_btest.cpp97e2583feab25a007ea58d7f69ad11e999ed1bc11645051179000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduFixed (1) division by zero in cut-cell natural transition and (2) unit test for default xtr value 2022-02-16 16:39:39 -060097e2583feab25a007ea58d7f69ad11e999ed1bc1Fixed (1) division by zero in cut-cell natural transition and (2) unit test for default xtr valueedittest/unit/pde/IBL/FluidModels_btest.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellForcedTransitionIBL_Panel_btest.cppeditsrc/Field/Element/GalerkinWeightedIntegral_New.htest/sandbox/Adapt2D_DGBR2_sansBOOM_toy.cppsrc/pde/sansBOOM/PDEsansBOOM.hsrc/pde/sansBOOM/OutputsansBOOM.hsrc/pde/sansBOOM/Traits_sansBOOM.h65498edf739e9fc1af557c8f90773ba6d9ee43841645070960000https://acdl.mit.edu/csi/user/darmofaldarmofaldarmofal@mit.eduStill not compiling. Pushing to allow Marshall to look at N=1 issue 2022-02-16 21:09:20 -070065498edf739e9fc1af557c8f90773ba6d9ee4384Still not compiling. Pushing to allow Marshall to look at N=1 issueedittest/sandbox/Adapt2D_DGBR2_sansBOOM_toy.cppeditsrc/pde/sansBOOM/PDEsansBOOM.heditsrc/pde/sansBOOM/Traits_sansBOOM.haddsrc/pde/sansBOOM/OutputsansBOOM.hsrc/pde/NS/PDERANSSA2D.hc0ad6a08209a0bdbf5e5398f63871c578d3c14771645102550000https://acdl.mit.edu/csi/user/waligurawaligurawaligura@mit.eduInitializing a variable in jacobianFluxViscous correctly 2022-02-17 07:55:50 -0500c0ad6a08209a0bdbf5e5398f63871c578d3c1477Initializing a variable in jacobianFluxViscous correctlyeditsrc/pde/NS/PDERANSSA2D.hsrc/LinearAlgebra/VectorType.h840c7e1b5f0e476b084f9eb412f66344f2cd24001645113815000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduAllow PDE to use ArrayQ = VectorS<1,T> 2022-02-17 11:03:35 -0500840c7e1b5f0e476b084f9eb412f66344f2cd2400Allow PDE to use ArrayQ = VectorS<1,T>editsrc/LinearAlgebra/VectorType.hsrc/SolutionTrek/Continuation/Homotopy/Homotopy.cppsrc/SolutionTrek/Continuation/Homotopy/Homotopy.hf28adfb6f26868eab3fe4e4cc8c8a0f9e71dba361645118675000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduHomotopy dict fixes 2022-02-17 12:24:35 -0500f28adfb6f26868eab3fe4e4cc8c8a0f9e71dba36Homotopy dict fixeseditsrc/SolutionTrek/Continuation/Homotopy/Homotopy.cppeditsrc/SolutionTrek/Continuation/Homotopy/Homotopy.htest/sandbox/Adapt2D_DGBR2_AD_Burgers_ST_toy.cppsrc/pde/AdvectionDiffusion/AdvectiveFlux1D.htest/unit/Meshing/avro/XField_avro_btest.cpp93610851afe319c64f7dea5a472405317f0783821645137490000https://acdl.mit.edu/csi/user/cwomackcwomackcwomack@mit.eduFinal changes to LocalLaxFriedrichs1D flux function and AD Burgers toy 2022-02-17 17:38:10 -050093610851afe319c64f7dea5a472405317f078382Final changes to LocalLaxFriedrichs1D flux function and AD Burgers toyeditsrc/pde/AdvectionDiffusion/AdvectiveFlux1D.hedittest/unit/Meshing/avro/XField_avro_btest.cppedittest/sandbox/Adapt2D_DGBR2_AD_Burgers_ST_toy.cppsrc/Optimization/Problems/Truss/CMakeLists.txtscripts/cppcheck/suppressions.txtsrc/Optimization/Methods/Linear/GLPK/GLPKSolver_impl.htest/unit/Optimization/Problems/Truss/TrussOptimization_wo_adapt_btest.cpptest/unit/Optimization/Methods/Linear/CMakeLists.txttest/unit/Optimization/Methods/Linear/GLPK_unit_fixture.cppsrc/Optimization/Methods/Linear/GLPK/GLPKSolver.cpptest/unit/Optimization/Problems/Truss/LOpt_unit_fixture.cppsrc/Optimization/Methods/Linear/GLPK/GLPKSolver_MatrixD_CRS_MatrixS.cppsrc/Optimization/Methods/Linear/GLPK/GLPKSolver.htest/unit/Optimization/Methods/Linear/LOptSolver_btest.cppsrc/Optimization/Methods/CMakeLists.txtsrc/Optimization/Methods/Linear/GLPK/GLPKSolver_CRS_double.cpptest/unit/Optimization/CMakeLists.txtsrc/Optimization/Methods/Linear/LOptSolver.cppsrc/Optimization/Methods/Linear/LOptSolverBase.hsrc/Optimization/Methods/Linear/GLPK/GLPKSolver_defines.hsrc/Optimization/Methods/Linear/GLPK/GLPKSolver_CRS_MatrixS.cppsrc/Optimization/Problems/Truss/ConstraintFrame_Truss.hsrc/Optimization/Problems/Truss/LengthObjective_Truss.hCMakeInclude/Finds/FindGLPK.cmakesrc/Optimization/Methods/Linear/LOptSolver.hsrc/Optimization/Problems/Truss/JacobianConstraint_Truss_Boundary.hsrc/Optimization/CMakeLists.txttest/unit/Optimization/Methods/Linear/GLPK_btest.cpptest/unit/Optimization/Methods/CMakeLists.txttest/unit/Optimization/Problems/Truss/JacobianConstraint_Truss_btest.cpptest/unit/Optimization/Problems/Truss/LengthFrame_Truss_btest.cpptest/unit/CMakeLists.txttest/unit/Optimization/Problems/Truss/LengthObjective_Truss_btest.cpptest/unit/Optimization/Problems/Truss/CMakeLists.txttest/unit/Optimization/Problems/Truss/ConstraintFrame_Truss_btest.cppsrc/Optimization/Problems/Truss/LengthObjective_Truss_Boundary.hsrc/Optimization/Problems/CMakeLists.txtsrc/CMakeLists.txttest/unit/Optimization/Problems/CMakeLists.txtsrc/Optimization/Problems/Truss/LengthFrame_Truss.hsrc/Optimization/Methods/Linear/CMakeLists.txtCMakeInclude/Dependencies.cmakeCMakeInclude/MakeSummaryFile.cmakesrc/Optimization/Problems/Truss/JacobianConstraint_Truss.hf0c005afd2884f249cba53ea3563ac379286038e1645141583000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduRemove GLPK 2022-02-17 18:46:23 -0500f0c005afd2884f249cba53ea3563ac379286038eRemove GLPKdeletesrc/Optimization/Methods/Linear/GLPK/GLPKSolver_MatrixD_CRS_MatrixS.cppdeletesrc/Optimization/Methods/Linear/GLPK/GLPKSolver_defines.hdeletetest/unit/Optimization/Problems/Truss/ConstraintFrame_Truss_btest.cppedittest/unit/CMakeLists.txtdeletesrc/Optimization/Methods/Linear/GLPK/GLPKSolver.hdeletetest/unit/Optimization/Problems/Truss/CMakeLists.txtdeletesrc/Optimization/Methods/Linear/GLPK/GLPKSolver_CRS_MatrixS.cppdeletesrc/Optimization/Methods/Linear/LOptSolver.heditsrc/CMakeLists.txtdeletetest/unit/Optimization/Methods/CMakeLists.txtdeletetest/unit/Optimization/Problems/Truss/LengthFrame_Truss_btest.cppdeletesrc/Optimization/Problems/Truss/ConstraintFrame_Truss.hdeletesrc/Optimization/Methods/CMakeLists.txteditCMakeInclude/Dependencies.cmakeeditCMakeInclude/MakeSummaryFile.cmakedeletesrc/Optimization/Methods/Linear/GLPK/GLPKSolver_CRS_double.cppdeletesrc/Optimization/Problems/Truss/LengthFrame_Truss.hdeletesrc/Optimization/Methods/Linear/GLPK/GLPKSolver_impl.hdeletesrc/Optimization/Methods/Linear/LOptSolverBase.hdeletetest/unit/Optimization/Problems/CMakeLists.txtdeletetest/unit/Optimization/Problems/Truss/LengthObjective_Truss_btest.cppdeletesrc/Optimization/Problems/CMakeLists.txtdeletetest/unit/Optimization/Methods/Linear/GLPK_btest.cppdeletetest/unit/Optimization/Methods/Linear/CMakeLists.txtdeletesrc/Optimization/Problems/Truss/LengthObjective_Truss_Boundary.hdeletetest/unit/Optimization/Problems/Truss/JacobianConstraint_Truss_btest.cppdeletesrc/Optimization/Problems/Truss/JacobianConstraint_Truss_Boundary.hdeletetest/unit/Optimization/Methods/Linear/LOptSolver_btest.cppdeletesrc/Optimization/Methods/Linear/CMakeLists.txtdeletesrc/Optimization/Methods/Linear/GLPK/GLPKSolver.cppdeletesrc/Optimization/Problems/Truss/JacobianConstraint_Truss.hdeleteCMakeInclude/Finds/FindGLPK.cmakedeletesrc/Optimization/Problems/Truss/LengthObjective_Truss.hdeletetest/unit/Optimization/CMakeLists.txtdeletetest/unit/Optimization/Methods/Linear/GLPK_unit_fixture.cppdeletesrc/Optimization/Problems/Truss/CMakeLists.txtdeletesrc/Optimization/Methods/Linear/LOptSolver.cppdeletetest/unit/Optimization/Problems/Truss/TrussOptimization_wo_adapt_btest.cppdeletesrc/Optimization/CMakeLists.txteditscripts/cppcheck/suppressions.txtdeletetest/unit/Optimization/Problems/Truss/LOpt_unit_fixture.cppCMakeLists.txtb8ea700834aeaf413d1cc330c0fe226465784a3e1645146629000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduMissed one 2022-02-17 20:10:29 -0500b8ea700834aeaf413d1cc330c0fe226465784a3eMissed oneeditCMakeLists.txttest/sandbox/Adapt2D_DGBR2_sansBOOM_toy.cppsrc/pde/sansBOOM/BCsansBOOM.hsrc/pde/sansBOOM/PDEsansBOOM.hsrc/pde/sansBOOM/OutputsansBOOM.hsrc/pde/sansBOOM/Traits_sansBOOM.h7385207254dd617929c0ee7240aae6d35a301c321645147942000https://acdl.mit.edu/csi/user/darmofaldarmofaldarmofal@mit.eduPushing current version of sansBOOM to repo 2022-02-17 18:32:22 -07007385207254dd617929c0ee7240aae6d35a301c32Pushing current version of sansBOOM to repoeditsrc/pde/sansBOOM/BCsansBOOM.hedittest/sandbox/Adapt2D_DGBR2_sansBOOM_toy.cppeditsrc/pde/sansBOOM/Traits_sansBOOM.heditsrc/pde/sansBOOM/PDEsansBOOM.heditsrc/pde/sansBOOM/OutputsansBOOM.htest/unit/pde/NS/PDEEulermitAVDiffusion3D_btest.cpptest/unit/pde/NS/PDEEulermitAVDiffusion3D_RANSSA_btest.cppsrc/pde/NS/PDEEulermitAVDiffusion3D.h7043c60fab24e51be7ebc63cbfaca046d6aa8fe51645249661000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduEnable 3D sourcePositivity for NS and RANSSA 2022-02-19 00:47:41 -05007043c60fab24e51be7ebc63cbfaca046d6aa8fe5Enable 3D sourcePositivity for NS and RANSSAedittest/unit/pde/NS/PDEEulermitAVDiffusion3D_btest.cppedittest/unit/pde/NS/PDEEulermitAVDiffusion3D_RANSSA_btest.cppeditsrc/pde/NS/PDEEulermitAVDiffusion3D.hsrc/pde/sansBOOM/PDEsansBOOM.hsrc/pde/sansBOOM/BCsansBOOM.hsrc/pde/NDConvert/OutputNDConvertSpaceTime1D.hsrc/pde/sansBOOM/Traits_sansBOOM.hdb81094844b24122f40b713953ad826f557731871645369891000https://acdl.mit.edu/csi/user/darmofaldarmofaldarmofal@mit.eduMost recent mods to sansBOOM implementation 2022-02-20 08:11:31 -0700db81094844b24122f40b713953ad826f55773187Most recent mods to sansBOOM implementationeditsrc/pde/sansBOOM/PDEsansBOOM.heditsrc/pde/NDConvert/OutputNDConvertSpaceTime1D.heditsrc/pde/sansBOOM/BCsansBOOM.heditsrc/pde/sansBOOM/Traits_sansBOOM.hsrc/BasisFunction/BasisFunctionArea_Triangle_Lagrange.cpp0c4ac8cd5ef31433eb194c934043b9a5ec99d4301645554965000https://acdl.mit.edu/csi/user/cwomackcwomackcwomack@mit.eduRemoved changes to Lagrange Triangle Merge branch 'develop' of ssh://acdl.mit.edu/home/svnroot/SANSproto into cwomack/develop 2022-02-22 13:36:05 -05000c4ac8cd5ef31433eb194c934043b9a5ec99d430Removed changes to Lagrange Triangleeditsrc/BasisFunction/BasisFunctionArea_Triangle_Lagrange.cpptest/unit/pde/NS/PDEEulermitAVDiffusion3D_RANSSA_btest.cppf53e5532469f3a809836f56eb425292c011307461645556779000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFix compile error 2022-02-22 14:06:19 -0500f53e5532469f3a809836f56eb425292c01130746Fix compile erroredittest/unit/pde/NS/PDEEulermitAVDiffusion3D_RANSSA_btest.cppsrc/pde/NS/BCEulermitAVSensor3D.htest/unit/pde/NS/BCEulermitAVSensor3D_btest.cpptest/system/CodeConsistency/BCEulermitAVSensor3D_Consistency_btest.cpptest/unit/pde/NS/BCEulermitAVSensor2D_btest.cppsrc/pde/NS/BCEulermitAVSensor2D.h547439bcc5e66a29c54a4519c15cf3f75ca874b61645583889000https://acdl.mit.edu/csi/user/blscblscblsc@mit.eduFixed Robin boundary condition for Euler/NS/RANSSA with sensor equation. Updated unit tests to reflect fix. 2022-02-22 21:38:09 -0500547439bcc5e66a29c54a4519c15cf3f75ca874b6Fixed Robin boundary condition for Euler/NS/RANSSA with sensor equation. Updated unit tests to reflect fix.editsrc/pde/NS/BCEulermitAVSensor2D.haddtest/unit/pde/NS/BCEulermitAVSensor3D_btest.cppeditsrc/pde/NS/BCEulermitAVSensor3D.hedittest/system/CodeConsistency/BCEulermitAVSensor3D_Consistency_btest.cppedittest/unit/pde/NS/BCEulermitAVSensor2D_btest.cppsrc/pde/NS/BCEulermitAVSensor3D.h741b004bed0ec75fffeb1adf5073fc03cb8a89221645637670000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduCompile fixes 2022-02-23 12:34:30 -0500741b004bed0ec75fffeb1adf5073fc03cb8a8922Compile fixeseditsrc/pde/NS/BCEulermitAVSensor3D.htest/sandbox/Adapt3D_CGStabilized_RANSSA_ArtificialViscosity_ONERA_M6_toy.cpp69f32186e42ba7b747d6d56b8c5eb9b28d4821ac1645641522000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduAnother compile fix 2022-02-23 13:38:42 -050069f32186e42ba7b747d6d56b8c5eb9b28d4821acAnother compile fixedittest/sandbox/Adapt3D_CGStabilized_RANSSA_ArtificialViscosity_ONERA_M6_toy.cppsrc/pde/AdvectionDiffusion/BCAdvectionDiffusion1D.cpptest/sandbox/Adapt2D_DGBR2_AD_Burgers_ST_toy.cpptest/unit/pde/AdvectionDiffusion/OutputAdvectionDiffusion_btest.cpptest/sandbox/Adapt2D_DGBR2_Burgers_ST_toy.cppsrc/pde/Burgers/BCBurgers1D.cppe4a82c4f7a991c578f11f68d790d6a1075709d381645643387000https://acdl.mit.edu/csi/user/cwomackcwomackcwomack@mit.eduCorrected Vera errors 2022-02-23 14:09:47 -0500e4a82c4f7a991c578f11f68d790d6a1075709d38Corrected Vera errorsedittest/unit/pde/AdvectionDiffusion/OutputAdvectionDiffusion_btest.cppedittest/sandbox/Adapt2D_DGBR2_Burgers_ST_toy.cppeditsrc/pde/AdvectionDiffusion/BCAdvectionDiffusion1D.cppedittest/sandbox/Adapt2D_DGBR2_AD_Burgers_ST_toy.cppeditsrc/pde/Burgers/BCBurgers1D.cpptest/sandbox/Adapt3D_DGBR2_RANSSA_CRM_toy.cpptest/sandbox/Adapt3D_DGBR2_RANSSA_ArtificialViscosity_ONERA_M6_toy.cpptest/sandbox/Solve3D_DGBR2_RANSSA_CRM_toy.cppeeb957673dde5c442f494db68dda3e99e92b1a681645647491000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduMore compile fixes 2022-02-23 15:18:11 -0500eeb957673dde5c442f494db68dda3e99e92b1a68More compile fixesedittest/sandbox/Adapt3D_DGBR2_RANSSA_CRM_toy.cppedittest/sandbox/Solve3D_DGBR2_RANSSA_CRM_toy.cppedittest/sandbox/Adapt3D_DGBR2_RANSSA_ArtificialViscosity_ONERA_M6_toy.cpptest/system/CodeConsistency/BCEulermitAVSensor3D_Consistency_RANSSA_btest.cpp5e2d7b0cd2e6ea188e4c0f75a62f6554749ef1ad1645674991000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFix consistency test 2022-02-23 22:56:31 -05005e2d7b0cd2e6ea188e4c0f75a62f6554749ef1adFix consistency testedittest/system/CodeConsistency/BCEulermitAVSensor3D_Consistency_RANSSA_btest.cpptest/unit/IO/Discretization/AlgebraicEquationSet_HDG_BL_delta_iPDE_iter0.plttest/unit/IO/Discretization/AlgebraicEquationSet_Galerkin_BL_delta_iPDE_iter0.plttest/unit/Discretization/DG/AlgebraicEquationSet_DGBR2_BuckleyLeverett_ST_btest.cpptest/unit/Discretization/HDG/AlgebraicEquationSet_HDG_BuckleyLeverett_ST_btest.cpptest/unit/IO/Discretization/AlgebraicEquationSet_DGBR2_BL_fullstep_iPDE_iter0.plttest/unit/Discretization/DG/AlgebraicEquationSet_DGAdvective_BuckleyLeverett_ST_btest.cpptest/sandbox/Adapt2D_DGBR2_AD_Burgers_ST_toy.cpptest/unit/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_BuckleyLeverett_ST_btest.cpptest/unit/IO/Discretization/AlgebraicEquationSet_DGBR2_BL_delta_iPDE_iter0.plttest/unit/IO/Discretization/AlgebraicEquationSet_DGAdvective_BL_delta_iPDE_iter0.plttest/unit/IO/Discretization/AlgebraicEquationSet_HDG_BL_fullstep_iPDE_iter0.pltsrc/NonLinearSolver/LineUpdate/HalvingSearchLineUpdate_impl.htest/unit/IO/Discretization/AlgebraicEquationSet_Galerkin_BL_fullstep_iPDE_iter0.plttest/unit/IO/Discretization/AlgebraicEquationSet_DGAdvective_BL_fullstep_iPDE_iter0.plt0c5f1d75cf105048782eac30a6a49ade7d9408291645812781000https://acdl.mit.edu/csi/user/cwomackcwomackcwomack@mit.eduModified Discretization unit tests to be consistent with linesearch 2022-02-25 13:13:01 -05000c5f1d75cf105048782eac30a6a49ade7d940829Modified Discretization unit tests to be consistent with linesearchedittest/unit/Discretization/HDG/AlgebraicEquationSet_HDG_BuckleyLeverett_ST_btest.cppedittest/unit/Discretization/DG/AlgebraicEquationSet_DGAdvective_BuckleyLeverett_ST_btest.cppaddtest/unit/IO/Discretization/AlgebraicEquationSet_DGBR2_BL_fullstep_iPDE_iter0.pltaddtest/unit/IO/Discretization/AlgebraicEquationSet_Galerkin_BL_delta_iPDE_iter0.pltaddtest/unit/IO/Discretization/AlgebraicEquationSet_HDG_BL_delta_iPDE_iter0.pltaddtest/unit/IO/Discretization/AlgebraicEquationSet_DGAdvective_BL_fullstep_iPDE_iter0.pltedittest/sandbox/Adapt2D_DGBR2_AD_Burgers_ST_toy.cppedittest/unit/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_BuckleyLeverett_ST_btest.cppaddtest/unit/IO/Discretization/AlgebraicEquationSet_DGBR2_BL_delta_iPDE_iter0.pltaddtest/unit/IO/Discretization/AlgebraicEquationSet_DGAdvective_BL_delta_iPDE_iter0.pltaddtest/unit/IO/Discretization/AlgebraicEquationSet_HDG_BL_fullstep_iPDE_iter0.pltaddtest/unit/IO/Discretization/AlgebraicEquationSet_Galerkin_BL_fullstep_iPDE_iter0.plteditsrc/NonLinearSolver/LineUpdate/HalvingSearchLineUpdate_impl.hedittest/unit/Discretization/DG/AlgebraicEquationSet_DGBR2_BuckleyLeverett_ST_btest.cpptest/sandbox/Adapt2D_DGBR2_AD_Burgers_ST_toy.cppsrc/pde/AnalyticFunction/ScalarFunction1D.hbf8b1619e4a93d1ac8750976ab7dc619eeae73ec1645984395000https://acdl.mit.edu/csi/user/cwomackcwomackcwomack@mit.eduRemoved unused variable and changed abs -> fabs 2022-02-27 12:53:15 -0500bf8b1619e4a93d1ac8750976ab7dc619eeae73ecRemoved unused variable and changed abs -> fabsedittest/sandbox/Adapt2D_DGBR2_AD_Burgers_ST_toy.cppeditsrc/pde/AnalyticFunction/ScalarFunction1D.htest/unit/SolutionTrek/Continuation/Homotopy_btest.cppsrc/Discretization/VMSDBR2/AlgebraicEquationSet_Local_VMSD_BR2.htest/unit/Field/GenHField_DG_btest.cppsrc/SolutionTrek/HarmonicBalance/AlgebraicEquationSet_HarmonicBalance.hsrc/Field/HField/HField_CG/HField_CG_impl.hsrc/Discretization/DG/AlgebraicEquationSet_Local_DG.hsrc/Discretization/Block/AlgebraicEquationSet_Block4x4.hsrc/Discretization/DG/AlgebraicEquationSet_Local_DG_impl.hsrc/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_impl.htest/unit/LinearAlgebra/Advection1D_btest.hsrc/Discretization/DG/AlgebraicEquationSet_DGBR2_impl.hsrc/LinearAlgebra/AlgebraicEquationSetBase_GloballyConstrained.hsrc/Discretization/Galerkin/AlgebraicEquationSet_Project.hsrc/SolutionTrek/Continuation/PseudoTime/AlgebraicEquationSet_PTC_VMSD.hsrc/pde/NS/PDERANSSA3D.hsrc/Discretization/Galerkin/AlgebraicEquationSet_HubTrace_Galerkin.hsrc/Discretization/VMSDBR2/AlgebraicEquationSet_VMSD_BR2.hsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_Stabilized.hsrc/Discretization/HDG/AlgebraicEquationSet_HDG_impl.hsrc/Discretization/Potential_Adjoint/AlgebraicEquationSet_CG_Potential_Adjoint.hsrc/Discretization/VMSD/AlgebraicEquationSet_Local_VMSD.htest/sandbox/Solve2D_CG_NACA_IPTF_linearsolve_toy.cppsrc/Field/HField/HField_DG/HField_DG_impl.htest/sandbox/Solve2D_CG_NACA_LIP_toy.cpptest/sandbox/Solve3D_CG_LIP_KuttaHACK_toy.cppsrc/Discretization/Galerkin/AlgebraicEquationSet_Local_Galerkin_Stabilized.htest/unit/NonLinearSolver/NewtonSolver_btest.cppsrc/Field/Field_NodalView_Spacetime.cppsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin.htest/unit/Field/HField_CG_btest.cpptest/unit/pde/NS/PDEEuler2D_btest.cppsrc/SolutionTrek/Continuation/Homotopy/AlgebraicEquationSet_HTC.hsrc/Discretization/Potential_Adjoint/AlgebraicEquationSet_CG_Potential_Virtual.hsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_Stabilized_LiftedBoundary.hsrc/Discretization/Galerkin/AlgebraicEquationSet_Local_Project.hsrc/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_CutcellTransitionIBL.htest/unit/pde/NS/PDERANSSA3D_btest.cpptest/system/CodeConsistency/AlgebraicEquationSet_PTC_VMSD_Triangle_SA_btest.cpptest/unit/LinearAlgebra/CustomJacobianEqSet_btest.hsrc/Field/DistanceFunction/DistanceFunction.cppsrc/Discretization/HDG/AlgebraicEquationSet_Local_HDG.hsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective_impl.hsrc/Adaptation/MOESS/SolverInterface_VMSD_BR2.hsrc/Discretization/Galerkin/AlgebraicEquationSet_Local_Galerkin_Stabilized_LiftedBoundary.htest/unit/pde/NS/PDERANSSA2D_btest.cppsrc/SolutionTrek/Continuation/Homotopy/PDEHomotopy.hsrc/SolutionTrek/Continuation/Homotopy/Homotopy.cppsrc/Discretization/HDG/AlgebraicEquationSet_HDGAdvective.hsrc/Discretization/DG/AlgebraicEquationSet_TransitionIBL.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_3D.htest/unit/SolutionTrek/Continuation/Homotopy_Euler_btest.cppsrc/Field/output_Tecplot_PDE.htest/unit/LinearAlgebra/Heat1D_btest.htest/unit/pde/NS/PDEEuler3D_btest.cppsrc/Discretization/Galerkin/ResidualParamSensitvity_Galerkin_Stabilized.hsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective.hsrc/Discretization/HDG/AlgebraicEquationSet_Hubtrace_HDGAdvective_CutcellTransitionIBL.hsrc/Field/ProjectSoln/Project_DG_to_CG/Project_DG_to_CG_impl.hsrc/pde/NS/PDERANSSA2D.hsrc/Discretization/Block/AlgebraicEquationSet_Block4x4_impl.hsrc/Discretization/VMSDBR2/ResidualCell_VMSD_BR2.htest/sandbox/Solve2D_CG_NACABTE_IPTF_toy.cpptest/unit/NonLinearSolver/ScalarGoldenSearchLineUpdate_btest.cppsrc/pde/NS/BCEulermitAVSensor2D.hsrc/Discretization/Block/AlgebraicEquationSet_Block2x2.hsrc/Discretization/Block/AlgebraicEquationSet_Block3x3_impl.hsrc/SolutionTrek/Continuation/Continuation.cppsrc/Discretization/HDG/AlgebraicEquationSet_Hubtrace_HDGAdvective.hsrc/SolutionTrek/Continuation/DissipationBased/AlgebraicEquationSet_DBC.htest/unit/SolutionTrek/Continuation/PDEHomotopy_btest.cpptest/unit/Field/HField_DG_btest.cppsrc/LinearAlgebra/AlgebraicEquationSetBase.hsrc/SolutionTrek/Continuation/PseudoTime/AlgebraicEquationSet_PTC.hsrc/PanelMethod/XfoilPanelEquationSet.hsrc/Discretization/HDG/AlgebraicEquationSet_HDG.hsrc/Discretization/Block/AlgebraicEquationSet_Block3x3.hsrc/SolutionTrek/TimeMarching/AlgebraicEquationSet_TimeMarch.htest/unit/Discretization/VMSDBR2/ProjectL2_VMSD_BR2_Source_btest.cppsrc/Discretization/Potential_Drela/AlgebraicEquationSet_CG_Potential_Drela.hsrc/SolutionTrek/TimeMarching/AlgebraicEquationSet_TimeStep.hsrc/Discretization/Galerkin/AlgebraicEquationSet_Local_Galerkin.hsrc/Discretization/Block/AlgebraicEquationSet_Block2x2_impl.hsrc/SolutionTrek/Continuation/ImplicitResidualSmoothing/AlgebraicEquationSet_IRS.htest/unit/NonLinearSolver/HalvingSearchLineUpdate_btest.cppsrc/Discretization/DG/AlgebraicEquationSet_DGBR2.hsrc/Discretization/FV_TPFA/AlgebraicEquationSet_FV_TPFA.hsrc/SolutionTrek/Continuation/Homotopy/PDESourceOnly.hsrc/Field/Field_NodalView_Line.cppsrc/pde/ArtificialViscosity/PDEmitAVSensor2D.htest/sandbox/Solve2D_CG_NACA_IPTF_toy.cppsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_BCDataField.hsrc/Discretization/Galerkin/AlgebraicEquationSet_HubTrace_Galerkin_cutCellTransitionIBL.hsrc/Field/Field_NodalView_Volume.cpptest/unit/Field/GenHField_CG_btest.cppsrc/UserInterfaces/BodyForceSolver_impl.hsrc/SolutionTrek/Continuation/Homotopy/Homotopy.hsrc/Discretization/VMSD/AlgebraicEquationSet_VMSD.hsrc/Field/Field_NodalView_Area.cpp5a6b9952d29422d9c04beb7d97aa44ae3b7426f31646081941000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFix parallel HField calculations. Fix couchmanMatrix for RANS. Cleanup Homotopy. Add the abilty to only get possessed DOF even for Statically Condensed systems. 2022-02-28 15:59:01 -05005a6b9952d29422d9c04beb7d97aa44ae3b7426f3Fix parallel HField calculations. Fix couchmanMatrix for RANS. Cleanup Homotopy. Add the abilty to only get possessed DOF even for Statically Condensed systems.editsrc/Discretization/Galerkin/AlgebraicEquationSet_Project.heditsrc/SolutionTrek/Continuation/Homotopy/Homotopy.cppeditsrc/Field/output_Tecplot_PDE.heditsrc/Discretization/HDG/AlgebraicEquationSet_Hubtrace_HDGAdvective.heditsrc/Discretization/Block/AlgebraicEquationSet_Block3x3.heditsrc/Discretization/HDG/AlgebraicEquationSet_HDGAdvective.heditsrc/Discretization/Block/AlgebraicEquationSet_Block2x2_impl.heditsrc/Discretization/VMSDBR2/AlgebraicEquationSet_Local_VMSD_BR2.hedittest/unit/pde/NS/PDEEuler2D_btest.cppedittest/unit/LinearAlgebra/Heat1D_btest.heditsrc/Discretization/Block/AlgebraicEquationSet_Block3x3_impl.heditsrc/Discretization/Galerkin/AlgebraicEquationSet_Local_Galerkin_Stabilized_LiftedBoundary.heditsrc/pde/NS/PDERANSSA3D.heditsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_Stabilized_LiftedBoundary.heditsrc/Field/Field_NodalView_Volume.cppeditsrc/Discretization/DG/AlgebraicEquationSet_DGBR2.hedittest/unit/Discretization/VMSDBR2/ProjectL2_VMSD_BR2_Source_btest.cppeditsrc/Discretization/Galerkin/AlgebraicEquationSet_Local_Galerkin_Stabilized.hedittest/unit/LinearAlgebra/Advection1D_btest.heditsrc/Discretization/VMSD/AlgebraicEquationSet_VMSD.heditsrc/SolutionTrek/Continuation/ImplicitResidualSmoothing/AlgebraicEquationSet_IRS.heditsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective.heditsrc/Discretization/Galerkin/AlgebraicEquationSet_HubTrace_Galerkin_cutCellTransitionIBL.hedittest/unit/Field/HField_DG_btest.cppeditsrc/Field/HField/HField_CG/HField_CG_impl.hedittest/sandbox/Solve2D_CG_NACA_IPTF_toy.cppeditsrc/Field/Field_NodalView_Line.cppeditsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective_impl.heditsrc/pde/NS/PDERANSSA2D.heditsrc/Discretization/Galerkin/AlgebraicEquationSet_HubTrace_Galerkin.heditsrc/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_CutcellTransitionIBL.heditsrc/Discretization/HDG/AlgebraicEquationSet_HDG_impl.heditsrc/SolutionTrek/Continuation/PseudoTime/AlgebraicEquationSet_PTC_VMSD.heditsrc/Discretization/Block/AlgebraicEquationSet_Block4x4_impl.heditsrc/Discretization/Galerkin/ResidualParamSensitvity_Galerkin_Stabilized.hedittest/sandbox/Solve2D_CG_NACA_IPTF_linearsolve_toy.cppeditsrc/Field/HField/HField_DG/HField_DG_impl.heditsrc/Discretization/Potential_Adjoint/AlgebraicEquationSet_CG_Potential_Virtual.heditsrc/Discretization/Potential_Adjoint/AlgebraicEquationSet_CG_Potential_Adjoint.heditsrc/Discretization/HDG/AlgebraicEquationSet_Hubtrace_HDGAdvective_CutcellTransitionIBL.heditsrc/Discretization/Galerkin/AlgebraicEquationSet_Local_Project.heditsrc/SolutionTrek/Continuation/DissipationBased/AlgebraicEquationSet_DBC.heditsrc/Discretization/VMSDBR2/AlgebraicEquationSet_VMSD_BR2.heditsrc/SolutionTrek/Continuation/Homotopy/AlgebraicEquationSet_HTC.hedittest/unit/SolutionTrek/Continuation/Homotopy_Euler_btest.cppeditsrc/SolutionTrek/Continuation/PseudoTime/AlgebraicEquationSet_PTC.heditsrc/Discretization/DG/AlgebraicEquationSet_Local_DG_impl.heditsrc/Discretization/DG/AlgebraicEquationSet_TransitionIBL.heditsrc/SolutionTrek/HarmonicBalance/AlgebraicEquationSet_HarmonicBalance.heditsrc/pde/NS/BCEulermitAVSensor2D.heditsrc/Field/Field_NodalView_Area.cppeditsrc/pde/ArtificialViscosity/PDEmitAVSensor2D.heditsrc/SolutionTrek/TimeMarching/AlgebraicEquationSet_TimeMarch.heditsrc/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_impl.hedittest/system/CodeConsistency/AlgebraicEquationSet_PTC_VMSD_Triangle_SA_btest.cppedittest/unit/Field/HField_CG_btest.cppeditsrc/LinearAlgebra/AlgebraicEquationSetBase.hedittest/sandbox/Solve2D_CG_NACABTE_IPTF_toy.cppeditsrc/Field/ProjectSoln/Project_DG_to_CG/Project_DG_to_CG_impl.hedittest/unit/Field/GenHField_DG_btest.cppeditsrc/Discretization/DG/AlgebraicEquationSet_DGBR2_impl.heditsrc/LinearAlgebra/AlgebraicEquationSetBase_GloballyConstrained.hedittest/unit/NonLinearSolver/ScalarGoldenSearchLineUpdate_btest.cppeditsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_Stabilized.heditsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_BCDataField.heditsrc/Discretization/HDG/AlgebraicEquationSet_Local_HDG.heditsrc/Discretization/DG/AlgebraicEquationSet_Local_DG.heditsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin.heditsrc/Discretization/VMSDBR2/ResidualCell_VMSD_BR2.hedittest/unit/pde/NS/PDERANSSA3D_btest.cppedittest/sandbox/Solve2D_CG_NACA_LIP_toy.cppeditsrc/Discretization/Block/AlgebraicEquationSet_Block2x2.heditsrc/Discretization/VMSD/AlgebraicEquationSet_Local_VMSD.heditsrc/Discretization/Block/AlgebraicEquationSet_Block4x4.heditsrc/Discretization/HDG/AlgebraicEquationSet_HDG.heditsrc/SolutionTrek/Continuation/Continuation.cppeditsrc/PanelMethod/XfoilPanelEquationSet.hedittest/unit/pde/NS/PDERANSSA2D_btest.cppedittest/unit/NonLinearSolver/HalvingSearchLineUpdate_btest.cppeditsrc/SolutionTrek/Continuation/Homotopy/PDEHomotopy.heditsrc/Adaptation/MOESS/SolverInterface_VMSD_BR2.heditsrc/Field/Field_NodalView_Spacetime.cppedittest/sandbox/Solve3D_CG_LIP_KuttaHACK_toy.cppedittest/unit/Field/GenHField_CG_btest.cppedittest/unit/LinearAlgebra/CustomJacobianEqSet_btest.heditsrc/SolutionTrek/TimeMarching/AlgebraicEquationSet_TimeStep.heditsrc/Discretization/Galerkin/AlgebraicEquationSet_Local_Galerkin.heditsrc/Field/DistanceFunction/DistanceFunction.cppeditsrc/UserInterfaces/BodyForceSolver_impl.hedittest/unit/SolutionTrek/Continuation/Homotopy_btest.cppedittest/unit/SolutionTrek/Continuation/PDEHomotopy_btest.cppedittest/unit/pde/NS/PDEEuler3D_btest.cppeditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_3D.heditsrc/Discretization/Potential_Drela/AlgebraicEquationSet_CG_Potential_Drela.heditsrc/Discretization/FV_TPFA/AlgebraicEquationSet_FV_TPFA.heditsrc/SolutionTrek/Continuation/Homotopy/Homotopy.heditsrc/SolutionTrek/Continuation/Homotopy/PDESourceOnly.hedittest/unit/NonLinearSolver/NewtonSolver_btest.cpptest/sandbox/Solve2D_VMSDBR2_HOW5_VI2_AV_HTC_toy.cppsrc/SolutionTrek/Continuation/Homotopy/Homotopy.hsrc/Field/output_Tecplot_PDE.h2773248514302e37ca2a7a5c84469dc7a8b3bb141646089490000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFix compile errors 2022-02-28 18:04:50 -05002773248514302e37ca2a7a5c84469dc7a8b3bb14Fix compile errorsedittest/sandbox/Solve2D_VMSDBR2_HOW5_VI2_AV_HTC_toy.cppeditsrc/SolutionTrek/Continuation/Homotopy/Homotopy.heditsrc/Field/output_Tecplot_PDE.hsrc/Discretization/VMSDBR2/SolutionData_VMSD_BR2.h5125df7c035b12499762dc980dfceb08df311ad11646233847000https://acdl.mit.edu/csi/user/blscblscblsc@mit.eduAdded updated VMSDBR2 projection. Default is off. To turn on define USE_FULLSPACE_PRJECTION_METHOD_2 at the top of your sandbox case. 2022-03-02 10:10:47 -05005125df7c035b12499762dc980dfceb08df311ad1Added updated VMSDBR2 projection. Default is off. To turn on define USE_FULLSPACE_PRJECTION_METHOD_2 at the top of your sandbox case.editsrc/Discretization/VMSDBR2/SolutionData_VMSD_BR2.hsrc/LinearAlgebra/DenseLinAlg/DynamicSize/MatrixD_InverseLUP_MatrixD_Instantiate.cppsrc/pde/sansBOOM/PDEsansBOOM.hsrc/LinearAlgebra/DenseLinAlg/DynamicSize/MatMul/MatMul_Native_Real.cpptest/unit/pde/sansBOOM/PDEsansBOOM_btest.cpptest/unit/pde/sansBOOM/OutputsansBOOM_btest.cppsrc/LinearAlgebra/DenseLinAlg/DynamicSize/MatrixD_InverseLU_MatrixS_Instantiate.cppsrc/pde/sansBOOM/AtmosphereStandard.hsrc/Field/FieldData/FieldDataInvMassMatrix_Cell.cppsrc/NonLinearSolver/NewtonSolver_MatrixD_CRS_MatrixS_Instantiate.cppCMakeLists.txtsrc/pde/sansBOOM/CMakeLists.txtsrc/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_sansBOOM.cpptest/sandbox/Adapt2D_DGBR2_sansBOOM_toy.cpptest/unit/pde/sansBOOM/CMakeLists.txtsrc/LinearAlgebra/DenseLinAlg/DynamicSize/MatrixD_Decompose_LUP_MatrixD_Instantiate.cppsrc/Discretization/CMakeLists.txtsrc/pde/sansBOOM/BCsansBOOM.cppsrc/LinearAlgebra/DenseLinAlg/StaticSize/MatMul/MatrixS_MatMul_Native_MatrixS_Instantiate.cppsrc/pde/sansBOOM/BCsansBOOM.hsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_sansBOOM.cppsrc/pde/sansBOOM/Traits_sansBOOM.hsrc/Field/ProjectSoln/PointwiseSolutionStorage.cppsrc/Field/ProjectSoln/ProjectGlobalField/ProjectGlobalField2D.cppsrc/Field/output_Tecplot/output_Tecplot_FieldArea.cppsrc/Field/FieldArea_CG_Cell_Instantiate_2D.cppsrc/LinearAlgebra/DenseLinAlg/DynamicSize/MatrixD_InverseLU_MatrixD_Instantiate.cppsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_MatrixD_CRS_MatrixS_Instantiate.cppsrc/LinearAlgebra/DenseLinAlg/DynamicSize/MatMul/MatMul_Native_MatrixS_Instantiate.cppsrc/pde/sansBOOM/OutputsansBOOM.hsrc/pde/NDConvert/BCNDConvertSpaceTime1D.hsrc/LinearAlgebra/SparseLinAlg/ScalarMatrix_CRS_int.cppsrc/ErrorEstimate/CMakeLists.txtsrc/NonLinearSolver/LineUpdate/HalvingSearchLineUpdate_MatrixD_CRS_MatrixS_Instantiate.cppsrc/LinearAlgebra/DenseLinAlg/DynamicSize/MatrixD_Decompose_LU_MatrixS_Instantiate.cpptest/unit/pde/sansBOOM/BCsansBOOM_btest.cpp7e10386e539f4d5bd9065712845a4128c621c0be1646270556000https://acdl.mit.edu/csi/user/darmofaldarmofaldarmofal@mit.edusansBOOM PDE, BC, Output implementation for DGBR2 with advection and diffusion terms 2022-03-02 18:22:36 -07007e10386e539f4d5bd9065712845a4128c621c0besansBOOM PDE, BC, Output implementation for DGBR2 with advection and diffusion termseditsrc/LinearAlgebra/DenseLinAlg/DynamicSize/MatrixD_Decompose_LUP_MatrixD_Instantiate.cppaddsrc/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_sansBOOM.cppeditsrc/ErrorEstimate/CMakeLists.txteditsrc/LinearAlgebra/DenseLinAlg/DynamicSize/MatrixD_Decompose_LU_MatrixS_Instantiate.cppedittest/unit/pde/sansBOOM/PDEsansBOOM_btest.cppeditsrc/Field/output_Tecplot/output_Tecplot_FieldArea.cppeditsrc/Field/FieldArea_CG_Cell_Instantiate_2D.cppeditsrc/LinearAlgebra/DenseLinAlg/StaticSize/MatMul/MatrixS_MatMul_Native_MatrixS_Instantiate.cppeditsrc/pde/NDConvert/BCNDConvertSpaceTime1D.heditsrc/Discretization/CMakeLists.txteditsrc/pde/sansBOOM/BCsansBOOM.cppeditsrc/LinearAlgebra/DenseLinAlg/DynamicSize/MatrixD_InverseLU_MatrixS_Instantiate.cppeditsrc/pde/sansBOOM/OutputsansBOOM.heditsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_MatrixD_CRS_MatrixS_Instantiate.cppeditsrc/pde/sansBOOM/AtmosphereStandard.heditsrc/pde/sansBOOM/Traits_sansBOOM.heditsrc/LinearAlgebra/DenseLinAlg/DynamicSize/MatrixD_InverseLUP_MatrixD_Instantiate.cppeditsrc/Field/ProjectSoln/PointwiseSolutionStorage.cppeditsrc/LinearAlgebra/DenseLinAlg/DynamicSize/MatrixD_InverseLU_MatrixD_Instantiate.cppeditsrc/NonLinearSolver/NewtonSolver_MatrixD_CRS_MatrixS_Instantiate.cppeditsrc/pde/sansBOOM/CMakeLists.txtedittest/sandbox/Adapt2D_DGBR2_sansBOOM_toy.cppeditsrc/Field/FieldData/FieldDataInvMassMatrix_Cell.cppeditsrc/NonLinearSolver/LineUpdate/HalvingSearchLineUpdate_MatrixD_CRS_MatrixS_Instantiate.cppaddsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_sansBOOM.cppeditCMakeLists.txteditsrc/LinearAlgebra/DenseLinAlg/DynamicSize/MatMul/MatMul_Native_MatrixS_Instantiate.cppeditsrc/LinearAlgebra/DenseLinAlg/DynamicSize/MatMul/MatMul_Native_Real.cppeditsrc/pde/sansBOOM/BCsansBOOM.heditsrc/Field/ProjectSoln/ProjectGlobalField/ProjectGlobalField2D.cppaddtest/unit/pde/sansBOOM/OutputsansBOOM_btest.cppeditsrc/pde/sansBOOM/PDEsansBOOM.haddtest/unit/pde/sansBOOM/BCsansBOOM_btest.cppedittest/unit/pde/sansBOOM/CMakeLists.txteditsrc/LinearAlgebra/SparseLinAlg/ScalarMatrix_CRS_int.cpptest/sandbox/Adapt2D_VMSDBR2_RANSSA_Subsonic_IsoFlatPlate_toy.cpptest/sandbox/Adapt2D_VMSDBR2_RANSSA_Supersonic_AV_HTC_toy.cppf4e281bfe9b890ee7c162ad7144d713a8c62966e1646270901000https://acdl.mit.edu/csi/user/waligurawaligurawaligura@mit.eduAdding two generalized cases to the sandbox to deal with gaps in avro use and SA RANS for adiabatic and isothermal flows. Will be good to keep these consistent with future homotopy and RANS changes 2022-03-02 20:28:21 -0500f4e281bfe9b890ee7c162ad7144d713a8c62966eAdding two generalized cases to the sandbox to deal with gaps in avro use and SA RANS for adiabatic and isothermal flows. Will be good to keep these consistent with future homotopy and RANS changesaddtest/sandbox/Adapt2D_VMSDBR2_RANSSA_Subsonic_IsoFlatPlate_toy.cppaddtest/sandbox/Adapt2D_VMSDBR2_RANSSA_Supersonic_AV_HTC_toy.cpptest/sandbox/Adapt2D_VMSDBR2_RANSSA_Subsonic_IsoFlatPlate_toy.cpp7de64c9b43704afeadb6482fb053857885bc8ae61646296605000https://acdl.mit.edu/csi/user/waligurawaligurawaligura@mit.eduRemoving flatplate xfld mesh option 2022-03-03 03:36:45 -05007de64c9b43704afeadb6482fb053857885bc8ae6Removing flatplate xfld mesh optionedittest/sandbox/Adapt2D_VMSDBR2_RANSSA_Subsonic_IsoFlatPlate_toy.cpptest/sandbox/Adapt2D_VMSDBR2_RANSSA_Supersonic_AV_HTC_toy.cppd2fff4d7ddc6a83ea0bdfc331c857f4e9a77fc3d1646301611000https://acdl.mit.edu/csi/user/waligurawaligurawaligura@mit.eduremoving xfield definition in supersonic case too 2022-03-03 05:00:11 -0500d2fff4d7ddc6a83ea0bdfc331c857f4e9a77fc3dremoving xfield definition in supersonic case tooedittest/sandbox/Adapt2D_VMSDBR2_RANSSA_Supersonic_AV_HTC_toy.cppsrc/LinearAlgebra/DenseLinAlg/StaticSize/MatrixS_Decompose_LU_Real_Instantiate.cppsrc/pde/sansBOOM/PDEsansBOOM.hsrc/LinearAlgebra/DenseLinAlg/StaticSize/MatMul/MatrixS_MatMul_Native_MatrixS_Instantiate.cppsrc/LinearAlgebra/DenseLinAlg/StaticSize/MatrixS_InverseLU_Real_Instantiate.cpp91577a740df67c2ac63a31b86b62c738908a6e6b1646344394000https://acdl.mit.edu/csi/user/darmofaldarmofaldarmofal@mit.eduFixed some missing instantiations needed for sansBOOM 2022-03-03 14:53:14 -070091577a740df67c2ac63a31b86b62c738908a6e6bFixed some missing instantiations needed for sansBOOMeditsrc/pde/sansBOOM/PDEsansBOOM.heditsrc/LinearAlgebra/DenseLinAlg/StaticSize/MatrixS_Decompose_LU_Real_Instantiate.cppeditsrc/LinearAlgebra/DenseLinAlg/StaticSize/MatMul/MatrixS_MatMul_Native_MatrixS_Instantiate.cppeditsrc/LinearAlgebra/DenseLinAlg/StaticSize/MatrixS_InverseLU_Real_Instantiate.cppsrc/LinearAlgebra/DenseLinAlg/DynamicSize/MatMul/MatMul_Native_MatrixS_Instantiate.cpp07dc98aa15e1e860a9eb105d242de0a26e78a3da1646363782000https://acdl.mit.edu/csi/user/darmofaldarmofaldarmofal@mit.eduA couple more instantiations added... this time because the intel compiler was complaining (though the other compilers were fine... ARGH) 2022-03-03 20:16:22 -070007dc98aa15e1e860a9eb105d242de0a26e78a3daA couple more instantiations added... this time because the intel compiler was complaining (though the other compilers were fine... ARGH)editsrc/LinearAlgebra/DenseLinAlg/DynamicSize/MatMul/MatMul_Native_MatrixS_Instantiate.cpptest/unit/pde/sansBOOM/PDEsansBOOM_btest.cpptest/unit/pde/sansBOOM/OutputsansBOOM_btest.cpptest/unit/pde/sansBOOM/BCsansBOOM_btest.cppd59228fa2a69c682782d89a11f3e5f65dd8027f51646374899000https://acdl.mit.edu/csi/user/darmofaldarmofaldarmofal@mit.eduAdjusting slightly tolerance on unit tests 2022-03-03 23:21:39 -0700d59228fa2a69c682782d89a11f3e5f65dd8027f5Adjusting slightly tolerance on unit testsedittest/unit/pde/sansBOOM/PDEsansBOOM_btest.cppedittest/unit/pde/sansBOOM/OutputsansBOOM_btest.cppedittest/unit/pde/sansBOOM/BCsansBOOM_btest.cpp.idea/vcs.xml.gitignore.idea/modules.xml.idea/SANS.iml.idea/.gitignoreSANS/SANS.xcodeproj/project.xcworkspace/contents.xcworkspacedataSANS/SANS.xcodeproj/project.pbxprojconfig.idea/misc.xmlSANS/SANS.xcodeproj/project.xcworkspace/xcshareddata/IDEWorkspaceChecks.plist38b8ced5ab143b244fcfafbc723a7e5e88bbb7921646411941000https://acdl.mit.edu/csi/user/deanna.sewelldeanna.sewelldeanna.sewell@colorado.eduUpdates to BDF time marching to allow ramping of integration order to provide the needed order-dependent past data 2022-03-04 09:39:01 -070038b8ced5ab143b244fcfafbc723a7e5e88bbb792Updates to BDF time marching to allow ramping of integration order to provide the needed order-dependent past dataedit.gitignoreadd.idea/.gitignoreadd.idea/misc.xmladdSANS/SANS.xcodeproj/project.xcworkspace/xcshareddata/IDEWorkspaceChecks.plistaddSANS/SANS.xcodeproj/project.pbxprojadd.idea/SANS.imladdconfigaddSANS/SANS.xcodeproj/project.xcworkspace/contents.xcworkspacedataadd.idea/modules.xmladd.idea/vcs.xmltest/unit/IO/NonLinearSolver/linesearch_residuals.dattest/unit/NonLinearSolver/HalvingSearchLineUpdate_btest.cpp1562d24c63ebc5d7f3ae9e861daed2ee050377911646697804000https://acdl.mit.edu/csi/user/cwomackcwomackcwomack@mit.eduModified line search test and removed residual dat file 2022-03-07 19:03:24 -05001562d24c63ebc5d7f3ae9e861daed2ee05037791Modified line search test and removed residual dat filedeletetest/unit/IO/NonLinearSolver/linesearch_residuals.datedittest/unit/NonLinearSolver/HalvingSearchLineUpdate_btest.cpptest/sandbox/Adapt3D_VMSDBR2_RANSSA_DPW_AV_HTC_toy.cpptest/sandbox/Solve2D_DGBR2_Euler_Riemann_AV_RK_toy.cppsrc/Field/NormalField/DeltaRef/DeltaRefTable.cpptest/sandbox/Solve2D_DGBR2_Triangle_Euler_Ramp_ArtificialViscosity_toy.cppsrc/pde/NS/BCEulermitAVSensor1D.htest/system/CodeConsistency/BCEulermitAVSensor2D_Consistency_btest.cpptest/sandbox/Adapt2D_VMSDBR2_NavierStokes_LaminarJoukowski_AV_HTC_P1_2k_toy.cppsrc/pde/ArtificialViscosity/PDEmitAVSensor3D.htest/sandbox/Solve2D_VMSDBR2_HOW5_VI2_AV_HTC_toy.cpptest/sandbox/Solve1D_DGBR2_Line_Euler_ArtNozzle_AV_ST_toy.cpptest/sandbox/Solve1D_DGBR2_Line_Euler_ArtNozzle_AV_Steady_toy.cpptest/unit/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_Stabilized_Triangle_SA_btest.cppsrc/pde/ArtificialViscosity/AVSensor_ViscousFlux2D.htest/sandbox/Solve3D_DGBR2_RANSSA_CRM_toy.cpptest/unit/pde/NS/BCEulermitAVSensor3D_btest.cpptest/sandbox/Solve1D_DGBR2_Line_Euler_Nozzle_ArtificialViscosity_toy.cppsrc/LinearAlgebra/AlgebraicEquationSetBase_GloballyConstrained.htest/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cpptest/system/CodeConsistency/BCEulermitAVSensor2D_Consistency_RANSSA_btest.cpptest/sandbox/Adapt2D_VMSDBR2_NavierStokes_LaminarJoukowski_AV_HTC_toy.cpptest/sandbox/Solve3D_VMSDBR2_BlottnerSphere_AV_HTC_toy.cpptest/sandbox/Solve2D_VMSDBR2_RANSSA_Joukowski_HTC_toy.cppsrc/pde/NS/BCEulermitAVSensor2D.htest/sandbox/Solve3D_CGStabilized_Euler_Bump_ArtificialViscosity_toy.cpptest/system/LocalSolve/Constrained_Solve_btest.cpptest/sandbox/Solve1D_DGBR2_Line_Euler_ShuOsher_AV_ST_toy.cpptest/sandbox/Solve2D_CGStabilized_HOW5_CI1_toy.cppsrc/pde/NS/BCEuler2D_mitState.hsrc/Field/NormalField/DeltaRef/ProjectDeltaRef.cpptest/sandbox/Solve1D_DGBR2_Line_Euler_Lax_AV_ST_toy.cppsrc/pde/NS/BCEuler1D_mitState_ST.hsrc/pde/ArtificialViscosity/AVSensor_ViscousFlux3D.htest/sandbox/Adapt2D_DGBR2_Euler_ArtNozzle_AV_ST_toy.cppsrc/Field/NormalField/DeltaRef/DeltaRefStorage.cpptest/sandbox/Adapt2D_DGBR2_HOW5_CI1_toy.cpptest/sandbox/Adapt2D_CGStabilized_HOW5_CI1_ArtificialViscosity_toy.cpptest/sandbox/Adapt3D_DGBR2_RANSSA_ArtificialViscosity_ONERA_M6_toy.cppsrc/Field/NormalField/NormalField_Volume.cpptest/sandbox/Solve2D_VMSD_HOW5_CI1_toy.cppsrc/pde/NS/BCEuler1D_mitState.hsrc/pde/NS/BCEulermitAVSensor3D.htest/sandbox/Solve1D_DGBR2_Line_Euler_ArtNozzle_AV_BDF_toy.cpptest/unit/pde/NS/BCEulermitAVSensor1D_btest.cpptest/sandbox/Solve2D_DGBR2_Euler_ForwardStep_AV_ST_toy.cppsrc/pde/ArtificialViscosity/PDEmitAVSensor1D.htest/sandbox/Adapt2D_VMSDBR2_RANSSA_Supersonic_AV_HTC_toy.cpptest/sandbox/Solve2D_VMSDBR2_Euler_RadialShock_AV_HTC_toy.cpptest/sandbox/Solve2D_CGStabilized_Triangle_Euler_NACA0012_ArtificialViscosity_toy.cpptest/sandbox/Solve2D_DGBR2_Quad_Euler_ForwardFacingStep_AV_BDF_toy.cpptest/sandbox/Adapt3D_CGStabilized_RANSSA_ArtificialViscosity_ONERA_M6_toy.cppsrc/LinearAlgebra/DenseLinAlg/StaticSize/MatMul/MatrixS_MatMul_Native_MatrixS_Instantiate.cppsrc/LinearAlgebra/DenseLinAlg/StaticSize/MatMul/MatrixS_MatMul_Native_Surreal_Instantiate.cpptest/system/CodeConsistency/BCEulermitAVSensor3D_Consistency_btest.cpptest/system/CodeConsistency/CMakeLists.txttest/sandbox/Adapt2D_VMSDBR2_NavierStokes_Blottner_Mach20_AV_HTC_toy.cpptest/sandbox/Adapt3D_DGBR2_RANSSA_CRM_toy.cpptest/sandbox/Solve2D_DGBR2_Triangle_Euler_NACA0012_ArtificialViscosity_toy.cpptest/unit/SolutionTrek/Continuation/Homotopy_Euler_btest.cpptest/sandbox/Solve3D_CGStabilized_RANSSA_OneraM6_ArtificialViscosity_toy.cppsrc/pde/NS/PDEmitAVDiffusionOuter2D.hsrc/pde/ArtificialViscosity/PDEmitAVSensor2D.hsrc/Field/NormalField/DeltaRef/DeltaRefTable.htest/sandbox/Solve2D_DGBR2_Triangle_Euler_RAE2822_ArtificialViscosity_toy.cpptest/unit/pde/NS/BCEulermitAVSensor2D_btest.cppsrc/pde/ArtificialViscosity/AVSensor_ViscousFlux1D.htest/sandbox/Solve2D_VMSDBR2_HOW5_VI2_Surface_AV_HTC_toy.cpptest/system/CodeConsistency/BCEulermitAVSensor3D_Consistency_RANSSA_btest.cpptest/sandbox/Solve3D_CGStabilized_RANSSA_OneraM6_Subsonic_ArtificialViscosity_toy.cppsrc/SolutionTrek/Continuation/Homotopy/Homotopy.hsrc/UserInterfaces/BodyForceSolver_impl.htest/sandbox/Solve2D_VMSDBR2_Euler_RadialShock_Corrected_AV_HTC_toy.cpptest/sandbox/Solve2D_DGBR2_HOW5_CI1_toy.cpp8977533a147f7a16763178a65d938f7d1859605a1646706322000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduCleanup BCmitAVsensor 2022-03-07 21:25:22 -05008977533a147f7a16763178a65d938f7d1859605aCleanup BCmitAVsensoredittest/sandbox/Solve3D_CGStabilized_RANSSA_OneraM6_ArtificialViscosity_toy.cppedittest/sandbox/Solve2D_CGStabilized_Triangle_Euler_NACA0012_ArtificialViscosity_toy.cppedittest/sandbox/Solve2D_VMSDBR2_HOW5_VI2_AV_HTC_toy.cppedittest/sandbox/Adapt3D_VMSDBR2_RANSSA_DPW_AV_HTC_toy.cppedittest/sandbox/Solve2D_DGBR2_HOW5_CI1_toy.cppeditsrc/pde/ArtificialViscosity/PDEmitAVSensor2D.hedittest/sandbox/Adapt2D_VMSDBR2_NavierStokes_LaminarJoukowski_AV_HTC_toy.cppedittest/sandbox/Solve2D_CGStabilized_HOW5_CI1_toy.cppeditsrc/Field/NormalField/DeltaRef/DeltaRefTable.cppedittest/sandbox/Solve2D_VMSDBR2_Euler_RadialShock_Corrected_AV_HTC_toy.cppedittest/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cppedittest/sandbox/Adapt2D_DGBR2_Euler_ArtNozzle_AV_ST_toy.cppedittest/system/CodeConsistency/BCEulermitAVSensor3D_Consistency_btest.cppedittest/sandbox/Solve1D_DGBR2_Line_Euler_Nozzle_ArtificialViscosity_toy.cppeditsrc/pde/NS/BCEuler1D_mitState_ST.hedittest/system/CodeConsistency/BCEulermitAVSensor3D_Consistency_RANSSA_btest.cppedittest/sandbox/Solve2D_DGBR2_Euler_Riemann_AV_RK_toy.cppedittest/sandbox/Solve3D_VMSDBR2_BlottnerSphere_AV_HTC_toy.cppedittest/sandbox/Adapt2D_DGBR2_HOW5_CI1_toy.cppedittest/sandbox/Solve2D_DGBR2_Euler_ForwardStep_AV_ST_toy.cppeditsrc/Field/NormalField/DeltaRef/DeltaRefTable.hedittest/sandbox/Adapt2D_VMSDBR2_NavierStokes_LaminarJoukowski_AV_HTC_P1_2k_toy.cppeditsrc/pde/ArtificialViscosity/AVSensor_ViscousFlux2D.heditsrc/Field/NormalField/NormalField_Volume.cppeditsrc/pde/ArtificialViscosity/PDEmitAVSensor1D.hedittest/unit/pde/NS/BCEulermitAVSensor2D_btest.cppeditsrc/pde/ArtificialViscosity/PDEmitAVSensor3D.hedittest/sandbox/Solve2D_DGBR2_Quad_Euler_ForwardFacingStep_AV_BDF_toy.cppedittest/sandbox/Solve3D_CGStabilized_RANSSA_OneraM6_Subsonic_ArtificialViscosity_toy.cppeditsrc/Field/NormalField/DeltaRef/ProjectDeltaRef.cppeditsrc/pde/NS/BCEulermitAVSensor3D.hedittest/sandbox/Solve2D_DGBR2_Triangle_Euler_NACA0012_ArtificialViscosity_toy.cppedittest/sandbox/Solve1D_DGBR2_Line_Euler_Lax_AV_ST_toy.cppeditsrc/Field/NormalField/DeltaRef/DeltaRefStorage.cppedittest/sandbox/Solve1D_DGBR2_Line_Euler_ArtNozzle_AV_ST_toy.cppedittest/system/CodeConsistency/BCEulermitAVSensor2D_Consistency_btest.cppeditsrc/pde/ArtificialViscosity/AVSensor_ViscousFlux1D.heditsrc/LinearAlgebra/AlgebraicEquationSetBase_GloballyConstrained.heditsrc/pde/NS/BCEulermitAVSensor1D.hedittest/unit/pde/NS/BCEulermitAVSensor3D_btest.cppeditsrc/LinearAlgebra/DenseLinAlg/StaticSize/MatMul/MatrixS_MatMul_Native_MatrixS_Instantiate.cppedittest/sandbox/Solve2D_DGBR2_Triangle_Euler_RAE2822_ArtificialViscosity_toy.cppedittest/sandbox/Solve2D_VMSD_HOW5_CI1_toy.cppeditsrc/SolutionTrek/Continuation/Homotopy/Homotopy.hedittest/sandbox/Solve1D_DGBR2_Line_Euler_ArtNozzle_AV_Steady_toy.cppedittest/sandbox/Adapt2D_VMSDBR2_RANSSA_Supersonic_AV_HTC_toy.cppedittest/sandbox/Adapt3D_CGStabilized_RANSSA_ArtificialViscosity_ONERA_M6_toy.cppedittest/sandbox/Adapt3D_DGBR2_RANSSA_CRM_toy.cppedittest/sandbox/Solve3D_DGBR2_RANSSA_CRM_toy.cppedittest/sandbox/Solve3D_CGStabilized_Euler_Bump_ArtificialViscosity_toy.cppedittest/system/CodeConsistency/CMakeLists.txtedittest/sandbox/Solve2D_VMSDBR2_RANSSA_Joukowski_HTC_toy.cppeditsrc/LinearAlgebra/DenseLinAlg/StaticSize/MatMul/MatrixS_MatMul_Native_Surreal_Instantiate.cppedittest/sandbox/Solve2D_VMSDBR2_Euler_RadialShock_AV_HTC_toy.cppeditsrc/pde/ArtificialViscosity/AVSensor_ViscousFlux3D.hedittest/sandbox/Solve1D_DGBR2_Line_Euler_ArtNozzle_AV_BDF_toy.cppedittest/unit/SolutionTrek/Continuation/Homotopy_Euler_btest.cppedittest/unit/pde/NS/BCEulermitAVSensor1D_btest.cppedittest/unit/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_Stabilized_Triangle_SA_btest.cppeditsrc/pde/NS/PDEmitAVDiffusionOuter2D.hedittest/sandbox/Adapt2D_VMSDBR2_NavierStokes_Blottner_Mach20_AV_HTC_toy.cppedittest/system/CodeConsistency/BCEulermitAVSensor2D_Consistency_RANSSA_btest.cppedittest/system/LocalSolve/Constrained_Solve_btest.cppeditsrc/pde/NS/BCEulermitAVSensor2D.hedittest/sandbox/Adapt2D_CGStabilized_HOW5_CI1_ArtificialViscosity_toy.cppeditsrc/pde/NS/BCEuler1D_mitState.hedittest/sandbox/Adapt3D_DGBR2_RANSSA_ArtificialViscosity_ONERA_M6_toy.cppedittest/sandbox/Solve2D_VMSDBR2_HOW5_VI2_Surface_AV_HTC_toy.cppedittest/sandbox/Solve1D_DGBR2_Line_Euler_ShuOsher_AV_ST_toy.cppeditsrc/UserInterfaces/BodyForceSolver_impl.hedittest/sandbox/Solve2D_DGBR2_Triangle_Euler_Ramp_ArtificialViscosity_toy.cppeditsrc/pde/NS/BCEuler2D_mitState.hsrc/pde/ArtificialViscosity/BCmitAVSensor3D.hsrc/pde/ArtificialViscosity/BCmitAVSensor1D.hsrc/pde/ArtificialViscosity/BCmitAVSensor2D.h7dd2b2acb8d217e267e4e2c444993a6c1f871b981646708527000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduForgot new files 2022-03-07 22:02:07 -05007dd2b2acb8d217e267e4e2c444993a6c1f871b98Forgot new filesaddsrc/pde/ArtificialViscosity/BCmitAVSensor1D.haddsrc/pde/ArtificialViscosity/BCmitAVSensor3D.haddsrc/pde/ArtificialViscosity/BCmitAVSensor2D.htest/unit/SolutionTrek/Continuation/Homotopy_btest.cppsrc/SolutionTrek/Continuation/Homotopy/BCHomotopy.htest/sandbox/Solve3D_VMSDBR2_BlottnerSphere_AV_HTC_toy.cpptest/sandbox/Adapt3D_VMSDBR2_RANSSA_DPW_AV_HTC_toy.cpptest/sandbox/Adapt2D_VMSDBR2_NavierStokes_LaminarJoukowski_AV_HTC_toy.cpptest/sandbox/Solve2D_VMSDBR2_RANSSA_Joukowski_HTC_toy.cpptest/sandbox/Adapt2D_VMSDBR2_NavierStokes_Blottner_Mach20_AV_HTC_toy.cppsrc/pde/NS/BCEulermitAVSensor2D.htest/sandbox/Adapt2D_VMSDBR2_NavierStokes_LaminarJoukowski_AV_HTC_P1_2k_toy.cpptest/system/LocalSolve/Constrained_Solve_btest.cpptest/unit/SolutionTrek/Continuation/Homotopy_Euler_btest.cpptest/sandbox/Solve2D_VMSDBR2_HOW5_VI2_AV_HTC_toy.cpptest/unit/SolutionTrek/Continuation/DissipationBased_btest.cpptest/sandbox/Adapt2D_VMSDBR2_RANSSA_Supersonic_AV_HTC_toy.cpptest/sandbox/Solve2D_VMSDBR2_HOW5_VI2_Surface_AV_HTC_toy.cpptest/unit/pde/NS/BCEulermitAVSensor2D_btest.cpptest/sandbox/Solve2D_VMSDBR2_Euler_RadialShock_AV_HTC_toy.cpptest/sandbox/Solve2D_VMSDBR2_Euler_RadialShock_Corrected_AV_HTC_toy.cpp062757e0dc1bdd5de5e82afa512e7e1ec2a8ee8f1646759885000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduAllow Homotopy to use pre-defined BCVectors 2022-03-08 12:18:05 -0500062757e0dc1bdd5de5e82afa512e7e1ec2a8ee8fAllow Homotopy to use pre-defined BCVectorsedittest/sandbox/Solve2D_VMSDBR2_Euler_RadialShock_Corrected_AV_HTC_toy.cppedittest/sandbox/Solve3D_VMSDBR2_BlottnerSphere_AV_HTC_toy.cppedittest/sandbox/Adapt3D_VMSDBR2_RANSSA_DPW_AV_HTC_toy.cppedittest/unit/SolutionTrek/Continuation/Homotopy_btest.cppedittest/sandbox/Solve2D_VMSDBR2_HOW5_VI2_Surface_AV_HTC_toy.cppedittest/sandbox/Adapt2D_VMSDBR2_NavierStokes_LaminarJoukowski_AV_HTC_P1_2k_toy.cppedittest/sandbox/Adapt2D_VMSDBR2_NavierStokes_LaminarJoukowski_AV_HTC_toy.cppedittest/sandbox/Solve2D_VMSDBR2_RANSSA_Joukowski_HTC_toy.cppeditsrc/SolutionTrek/Continuation/Homotopy/BCHomotopy.hedittest/unit/SolutionTrek/Continuation/DissipationBased_btest.cppedittest/sandbox/Adapt2D_VMSDBR2_RANSSA_Supersonic_AV_HTC_toy.cppedittest/unit/pde/NS/BCEulermitAVSensor2D_btest.cppedittest/sandbox/Solve2D_VMSDBR2_HOW5_VI2_AV_HTC_toy.cppedittest/sandbox/Adapt2D_VMSDBR2_NavierStokes_Blottner_Mach20_AV_HTC_toy.cppedittest/sandbox/Solve2D_VMSDBR2_Euler_RadialShock_AV_HTC_toy.cppedittest/system/LocalSolve/Constrained_Solve_btest.cppeditsrc/pde/NS/BCEulermitAVSensor2D.hedittest/unit/SolutionTrek/Continuation/Homotopy_Euler_btest.cppsrc/pde/ArtificialViscosity/AVSensor_Source2D.hsrc/pde/ArtificialViscosity/AVSensor_Source3D.he5359e6f9a8b9f045b656742836b6499e006836c1646763613000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduMake AVSensor_Source_VMSD_SPD consistent between 2D and 3D 2022-03-08 13:20:13 -0500e5359e6f9a8b9f045b656742836b6499e006836cMake AVSensor_Source_VMSD_SPD consistent between 2D and 3Deditsrc/pde/ArtificialViscosity/AVSensor_Source2D.heditsrc/pde/ArtificialViscosity/AVSensor_Source3D.htest/sandbox/Solve2D_DGBR2_Euler_Riemann_AV_RK_toy.cpptest/sandbox/Solve2D_DGBR2_Triangle_Euler_Ramp_ArtificialViscosity_toy.cpptest/sandbox/Solve2D_DGBR2_Euler_ForwardStep_AV_ST_toy.cpptest/sandbox/Adapt2D_DGBR2_HOW5_CI1_toy.cpptest/sandbox/Solve2D_DGBR2_Quad_Euler_ForwardFacingStep_AV_BDF_toy.cpptest/sandbox/Adapt2D_CGStabilized_HOW5_CI1_ArtificialViscosity_toy.cpptest/sandbox/Solve2D_CGStabilized_HOW5_CI1_toy.cpptest/sandbox/Solve2D_VMSD_HOW5_CI1_toy.cpptest/sandbox/Solve2D_DGBR2_HOW5_CI1_toy.cppdacff697fc0bcf26457583c9b21360b739c09db61646784766000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFix compile errors 2022-03-08 19:12:46 -0500dacff697fc0bcf26457583c9b21360b739c09db6Fix compile errorsedittest/sandbox/Solve2D_DGBR2_Euler_ForwardStep_AV_ST_toy.cppedittest/sandbox/Solve2D_DGBR2_Triangle_Euler_Ramp_ArtificialViscosity_toy.cppedittest/sandbox/Adapt2D_DGBR2_HOW5_CI1_toy.cppedittest/sandbox/Solve2D_DGBR2_Euler_Riemann_AV_RK_toy.cppedittest/sandbox/Solve2D_DGBR2_Quad_Euler_ForwardFacingStep_AV_BDF_toy.cppedittest/sandbox/Solve2D_VMSD_HOW5_CI1_toy.cppedittest/sandbox/Solve2D_DGBR2_HOW5_CI1_toy.cppedittest/sandbox/Adapt2D_CGStabilized_HOW5_CI1_ArtificialViscosity_toy.cppedittest/sandbox/Solve2D_CGStabilized_HOW5_CI1_toy.cpptest/sandbox/Solve2D_DGBR2_Euler_Riemann_AV_RK_toy.cppe5897b82d953f5dabe4ee56740ef6355b76427e71646788729000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduvera fix 2022-03-08 20:18:49 -0500e5897b82d953f5dabe4ee56740ef6355b76427e7vera fixedittest/sandbox/Solve2D_DGBR2_Euler_Riemann_AV_RK_toy.cpptest/system/CodeConsistency/Curvilinear2D_VMSD_AD_btest.cppdc81afa2cfeb39329613155770b781d48aa883fd1646805340000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFix test for parallel 2022-03-09 00:55:40 -0500dc81afa2cfeb39329613155770b781d48aa883fdFix test for paralleledittest/system/CodeConsistency/Curvilinear2D_VMSD_AD_btest.cpptest/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cppe4e566bc61e88d7b50ac92e6ef95ec2a06086e681646841295000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduCleanup file dump 2022-03-09 10:54:55 -0500e4e566bc61e88d7b50ac92e6ef95ec2a06086e68Cleanup file dumpedittest/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cppsrc/pde/ArtificialViscosity/PDEmitAVSensor3D.hsrc/Field/HField/GenHField_DG/GenHField_DG_impl.hsrc/Field/HField/HField_DG/HField_DG_impl.htest/unit/Field/HField_DG_btest.cppsrc/pde/ArtificialViscosity/PDEmitAVSensor1D.hsrc/pde/ArtificialViscosity/PDEmitAVSensor2D.h737f34f4b2beee9095e6d1a4c46809fb4fb74b351646930619000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduUse Metric to compute HField_DG instead of size/perimiter 2022-03-10 11:43:39 -0500737f34f4b2beee9095e6d1a4c46809fb4fb74b35Use Metric to compute HField_DG instead of size/perimitereditsrc/pde/ArtificialViscosity/PDEmitAVSensor2D.hedittest/unit/Field/HField_DG_btest.cppeditsrc/Field/HField/GenHField_DG/GenHField_DG_impl.heditsrc/Field/HField/HField_DG/HField_DG_impl.heditsrc/pde/ArtificialViscosity/PDEmitAVSensor1D.heditsrc/pde/ArtificialViscosity/PDEmitAVSensor3D.htest/sandbox/Adapt3D_VMSDBR2_RANSSA_DPW_AV_HTC_toy.cppsrc/Discretization/VMSDBR2/AlgebraicEquationSet_Local_VMSD_BR2.hsrc/Discretization/VMSDBR2/AlgebraicEquationSet_VMSD_BR2.h148b853196b7b4d791be872a8bfa37e40d326e941646952032000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduAdd ResidualNorm_InvJac_DOF_Weighted to VMSDBR2 2022-03-10 17:40:32 -0500148b853196b7b4d791be872a8bfa37e40d326e94Add ResidualNorm_InvJac_DOF_Weighted to VMSDBR2edittest/sandbox/Adapt3D_VMSDBR2_RANSSA_DPW_AV_HTC_toy.cppeditsrc/Discretization/VMSDBR2/AlgebraicEquationSet_VMSD_BR2.heditsrc/Discretization/VMSDBR2/AlgebraicEquationSet_Local_VMSD_BR2.hsrc/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_CutcellTransitionIBL.hsrc/Discretization/VMSD/AlgebraicEquationSet_Local_VMSD.htest/sandbox/Adapt3D_VMSDBR2_RANSSA_DPW_AV_HTC_toy.cppsrc/Discretization/VMSDBR2/AlgebraicEquationSet_Local_VMSD_BR2.hsrc/Discretization/Galerkin/AlgebraicEquationSet_Local_Galerkin_Stabilized.hsrc/Discretization/VMSDBR2/AlgebraicEquationSet_VMSD_BR2.hsrc/Discretization/Galerkin/AlgebraicEquationSet_Local_Galerkin.hsrc/Discretization/Galerkin/AlgebraicEquationSet_Local_Project.hsrc/Discretization/Galerkin/AlgebraicEquationSet_Local_Galerkin_Stabilized_LiftedBoundary.h7bcba8771f3194b96ae39fb3480fedad671293b71646969393000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduRevert last change 2022-03-10 22:29:53 -05007bcba8771f3194b96ae39fb3480fedad671293b7Revert last changeeditsrc/Discretization/Galerkin/AlgebraicEquationSet_Local_Galerkin_Stabilized.hedittest/sandbox/Adapt3D_VMSDBR2_RANSSA_DPW_AV_HTC_toy.cppeditsrc/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_CutcellTransitionIBL.heditsrc/Discretization/Galerkin/AlgebraicEquationSet_Local_Galerkin_Stabilized_LiftedBoundary.heditsrc/Discretization/VMSDBR2/AlgebraicEquationSet_VMSD_BR2.heditsrc/Discretization/Galerkin/AlgebraicEquationSet_Local_Project.heditsrc/Discretization/Galerkin/AlgebraicEquationSet_Local_Galerkin.heditsrc/Discretization/VMSD/AlgebraicEquationSet_Local_VMSD.heditsrc/Discretization/VMSDBR2/AlgebraicEquationSet_Local_VMSD_BR2.hsrc/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_CutcellTransitionIBL.hsrc/Field/FieldAssociativity.hfec43b671abd43a42a703ffa9d57a5ff287fd9ed1647038926000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFix compile error, and more verbose assertion 2022-03-11 17:48:46 -0500fec43b671abd43a42a703ffa9d57a5ff287fd9edFix compile error, and more verbose assertioneditsrc/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_CutcellTransitionIBL.heditsrc/Field/FieldAssociativity.htest/unit/SolutionTrek/Continuation/ImplicitResidualSmoothing_btest.cpptest/unit/SolutionTrek/Continuation/PseudoTime_btest.cpp0a5c48e06c5fe2b02c08ee9e61a0d5cc7e538c9d1647096583000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduUpdate unit tests 2022-03-12 09:49:43 -05000a5c48e06c5fe2b02c08ee9e61a0d5cc7e538c9dUpdate unit testsedittest/unit/SolutionTrek/Continuation/ImplicitResidualSmoothing_btest.cppedittest/unit/SolutionTrek/Continuation/PseudoTime_btest.cpptest/unit/Field/HField_CG_btest.cpp42f90cc74cdd5987556a906f3ba28ccf068d7c741647096898000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduAnother unit test update 2022-03-12 09:54:58 -050042f90cc74cdd5987556a906f3ba28ccf068d7c74Another unit test updateedittest/unit/Field/HField_CG_btest.cppsrc/Field/HField/HField_DG/HField_DG_Area_2D.cpptest/unit/Field/Element/ElementXFieldLine_1D_btest.cppsrc/Field/HField/HField_DG/HField_DG_Volume.cppsrc/Field/HField/HField_DG/HField_DG_Line_1D.cpptest/unit/Field/Element/ElementXFieldLine_2D_btest.cppsrc/Field/Element/ElementXFieldLine_Instantiate_2D.cppsrc/Field/HField/HField_DG/HField_DG_impl.hsrc/Field/HField/HField_DG/HField_DG_Line_2D.cppsrc/Field/HField/HField_DG/HField_DG_Area_3D.cppsrc/Field/HField/HField_DG/HField_DG_Area.cppsrc/Field/HField/HField_DG/HField_DG_Line.cppsrc/Field/CMakeLists.txtsrc/Field/HField/HField_DG/HField_DG_Spacetime.cpp4be7292dfb58600268ae862e06792be86c7555531647115399000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduAdd ImpliedMetric for Line 2D element. 2022-03-12 15:03:19 -05004be7292dfb58600268ae862e06792be86c755553Add ImpliedMetric for Line 2D element.edittest/unit/Field/Element/ElementXFieldLine_2D_btest.cppeditsrc/Field/HField/HField_DG/HField_DG_impl.hdeletesrc/Field/HField/HField_DG/HField_DG_Area.cppeditsrc/Field/HField/HField_DG/HField_DG_Volume.cppaddsrc/Field/HField/HField_DG/HField_DG_Line_1D.cppaddsrc/Field/HField/HField_DG/HField_DG_Line_2D.cppdeletesrc/Field/HField/HField_DG/HField_DG_Line.cppaddsrc/Field/HField/HField_DG/HField_DG_Area_2D.cppeditsrc/Field/Element/ElementXFieldLine_Instantiate_2D.cppedittest/unit/Field/Element/ElementXFieldLine_1D_btest.cppaddsrc/Field/HField/HField_DG/HField_DG_Area_3D.cppeditsrc/Field/CMakeLists.txteditsrc/Field/HField/HField_DG/HField_DG_Spacetime.cpptest/unit/Field/Element/ElementXFieldLine_2D_btest.cpp27050daaded80572472cec7bb45268b7cd2da4ef1647132977000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFix unit test 2022-03-12 19:56:17 -050027050daaded80572472cec7bb45268b7cd2da4efFix unit testedittest/unit/Field/Element/ElementXFieldLine_2D_btest.cpptest/unit/Field/Element/ElementXFieldLine_2D_btest.cppd9e9abc4d0a75caf7fe2a6b7a2e244648470cc811647180147000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduUse SANS_CHECK_CLOSE 2022-03-13 10:02:27 -0400d9e9abc4d0a75caf7fe2a6b7a2e244648470cc81Use SANS_CHECK_CLOSEedittest/unit/Field/Element/ElementXFieldLine_2D_btest.cppsrc/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_Burgers1D_Conservative_DUSN.cpptest/system/IO/ErrorOrder/ErrorOrder_1D_HDG_Burgers_MinTest.txttest/unit/pde/Burgers/PDEBurgers2D_btest.cpptest/unit/IO/pde/PDEBurgers_ArtificialViscosity1D_pattern.txtsrc/Discretization/DG/DGAdvective_Instantiate/AlgebraicEquationSet_DGAdvective_Burgers1D_Conservative_DNSN.cppCMakeLists.txtsrc/pde/Burgers/PDEBurgers1D.cppsrc/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_Burgers_AV1D_DUSUG.cppsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Burgers1D_Conservative_DUSU.cppsrc/pde/Burgers/PDEBurgers_fwd.htest/unit/Discretization/DG/JacobianCell_DGBR2_Param_Burgers_btest.cppsrc/Discretization/CMakeLists.txttest/unit/IO/pde/PDEBurgers2D_pattern.txtsrc/pde/Burgers/PDEBurgers2D.cpptest/system/Asymptotic/CMakeLists.txtsrc/pde/Burgers/BCBurgers1D.cpptest/unit/pde/Burgers/PDEBurgers_ArtificialViscosity2D_btest.cppsrc/pde/Burgers/PDEBurgers2D.hsrc/pde/Burgers/BCBurgers2D.cppsrc/Discretization/HDG/Instantiate/AlgebraicEquationSet_HDG_Burgers1D_Conservative_DUSU.cppsrc/pde/Burgers/BurgersConservative2D.cpptest/unit/Discretization/DG/JacobianInteriorTrace_DGBR2_Param_Burgers_btest.cppsrc/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_Burgers2D_Conservative_DUSN.cpptest/sandbox/CMakeLists.txttest/sandbox/Solve1D_DGBR2_Burgers_ArtificialViscosity_toy.cpptest/system/IO/ErrorOrder/ErrorOrder_1D_HDG_Burgers_FullTest.txttest/unit/pde/Burgers/PDEBurgers_ArtificialViscosity1D_btest.cppsrc/pde/Burgers/BurgersConservative2D.htest/system/IO/ErrorOrder/ErrorOrder_1D_DGBR2_Burgers_MinTest.txtsrc/pde/Burgers/PDEBurgers_ArtificialViscosity2D.htest/sandbox/Solve1D_VMSDBR2_Burgers_toy.cpptest/system/Asymptotic/ErrorOrder_1D_DGBR2_Burgers_btest.cppsrc/pde/Burgers/CMakeLists.txttest/sandbox/Adapt2D_DGBR2_Burgers_ArtificialViscosity_ST_toy.cpptest/unit/pde/Burgers/CMakeLists.txttest/sandbox/Adapt3D_DGBR2_Burgers_ArtificialViscosity_ST_toy.cppsrc/pde/Burgers/BCBurgers1D.htest/unit/IO/pde/PDEBurgers_ArtificialViscosity2D_pattern.txttest/unit/pde/Burgers/BCBurgers1D_btest.cppsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Burgers1D_Conservative_DUSN.cppsrc/pde/Burgers/BurgersConservative1D.hsrc/pde/Burgers/PDEBurgers_ArtificialViscosity1D.htest/unit/IO/pde/PDEBurgers1D_pattern.txtsrc/pde/Burgers/BCmitAVSensorBurgers2D.cppsrc/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_Burgers_AV2D_DUSN.cppsrc/pde/Burgers/BCmitAVSensorBurgers2D.htest/unit/pde/CMakeLists.txtsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Burgers_AV1D_DUSUG.cpptest/sandbox/Adapt2D_DGBR2_Burgers_ST_toy.cppsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Burgers2D_Conservative_DUSN.cpptest/system/BlockSolve/CMakeLists.txttest/system/Asymptotic/ErrorOrder_1D_HDG_Burgers_btest.cpptest/system/IO/ErrorOrder/ErrorOrder_1D_DGBR2_Burgers_FullTest.txtsrc/pde/Burgers/BCmitAVSensorBurgers1D.cppsrc/pde/CMakeLists.txttest/sandbox/Solve1D_DGBR2_Burgers_toy.cpptest/sandbox/Adapt3D_DGBR2_Burgers_ST_toy.cppsrc/pde/Burgers/BCBurgers2D.hsrc/pde/Burgers/BCmitAVSensorBurgers1D.hsrc/pde/Burgers/PDEBurgers1D.hsrc/pde/Burgers/Burgers_ArtificialViscosity_fwd.htest/unit/pde/Burgers/PDEBurgers1D_btest.cpptest/unit/pde/Burgers/BCBurgers2D_btest.cppsrc/ErrorEstimate/CMakeLists.txtsrc/pde/Burgers/BurgersConservative1D.cpp05184f956de400995a76c5daf9932cd3cc3442a71647289100000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduRemove Burgers PDE 2022-03-14 16:18:20 -040005184f956de400995a76c5daf9932cd3cc3442a7Remove Burgers PDEdeletesrc/pde/Burgers/BurgersConservative1D.cppdeletesrc/pde/Burgers/PDEBurgers_ArtificialViscosity2D.hdeletesrc/pde/Burgers/CMakeLists.txtedittest/unit/pde/CMakeLists.txteditsrc/pde/CMakeLists.txtdeletetest/sandbox/Adapt3D_DGBR2_Burgers_ST_toy.cppdeletesrc/pde/Burgers/BCBurgers1D.cppdeletetest/sandbox/Adapt2D_DGBR2_Burgers_ArtificialViscosity_ST_toy.cppdeletetest/sandbox/Solve1D_DGBR2_Burgers_ArtificialViscosity_toy.cppdeletetest/system/Asymptotic/ErrorOrder_1D_DGBR2_Burgers_btest.cppdeletesrc/pde/Burgers/BCmitAVSensorBurgers2D.hdeletesrc/pde/Burgers/PDEBurgers1D.cppdeletetest/unit/pde/Burgers/PDEBurgers_ArtificialViscosity2D_btest.cppdeletesrc/pde/Burgers/PDEBurgers2D.hdeletesrc/pde/Burgers/BCBurgers2D.heditsrc/ErrorEstimate/CMakeLists.txteditsrc/Discretization/CMakeLists.txtdeletetest/system/IO/ErrorOrder/ErrorOrder_1D_DGBR2_Burgers_FullTest.txtdeletesrc/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_Burgers_AV1D_DUSUG.cppdeletesrc/pde/Burgers/Burgers_ArtificialViscosity_fwd.hdeletetest/system/IO/ErrorOrder/ErrorOrder_1D_HDG_Burgers_FullTest.txtdeletetest/unit/IO/pde/PDEBurgers_ArtificialViscosity2D_pattern.txtdeletesrc/Discretization/HDG/Instantiate/AlgebraicEquationSet_HDG_Burgers1D_Conservative_DUSU.cppdeletesrc/pde/Burgers/PDEBurgers_ArtificialViscosity1D.hdeletesrc/pde/Burgers/BCmitAVSensorBurgers1D.cppdeletesrc/pde/Burgers/BCBurgers1D.heditCMakeLists.txtdeletesrc/pde/Burgers/BCmitAVSensorBurgers1D.hdeletetest/unit/IO/pde/PDEBurgers2D_pattern.txtdeletesrc/pde/Burgers/PDEBurgers_fwd.hdeletetest/sandbox/Solve1D_VMSDBR2_Burgers_toy.cppdeletetest/unit/pde/Burgers/PDEBurgers_ArtificialViscosity1D_btest.cppdeletesrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Burgers1D_Conservative_DUSN.cppdeletesrc/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_Burgers1D_Conservative_DUSN.cppdeletetest/unit/IO/pde/PDEBurgers1D_pattern.txtdeletesrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Burgers_AV1D_DUSUG.cppdeletesrc/pde/Burgers/BurgersConservative2D.cppedittest/system/Asymptotic/CMakeLists.txtdeletetest/unit/pde/Burgers/PDEBurgers1D_btest.cppdeletesrc/pde/Burgers/BCBurgers2D.cppdeletetest/unit/Discretization/DG/JacobianInteriorTrace_DGBR2_Param_Burgers_btest.cppdeletesrc/pde/Burgers/PDEBurgers2D.cppdeletesrc/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_Burgers2D_Conservative_DUSN.cppedittest/system/BlockSolve/CMakeLists.txtdeletetest/unit/IO/pde/PDEBurgers_ArtificialViscosity1D_pattern.txtdeletetest/unit/pde/Burgers/BCBurgers1D_btest.cppdeletesrc/pde/Burgers/PDEBurgers1D.hdeletetest/unit/pde/Burgers/CMakeLists.txtdeletesrc/pde/Burgers/BurgersConservative1D.hdeletetest/sandbox/Adapt3D_DGBR2_Burgers_ArtificialViscosity_ST_toy.cppdeletetest/system/IO/ErrorOrder/ErrorOrder_1D_DGBR2_Burgers_MinTest.txtdeletetest/unit/Discretization/DG/JacobianCell_DGBR2_Param_Burgers_btest.cppdeletetest/system/IO/ErrorOrder/ErrorOrder_1D_HDG_Burgers_MinTest.txtdeletetest/unit/pde/Burgers/BCBurgers2D_btest.cppdeletesrc/Discretization/DG/DGAdvective_Instantiate/AlgebraicEquationSet_DGAdvective_Burgers1D_Conservative_DNSN.cppdeletesrc/pde/Burgers/BurgersConservative2D.hdeletesrc/pde/Burgers/BCmitAVSensorBurgers2D.cppedittest/sandbox/CMakeLists.txtdeletetest/sandbox/Adapt2D_DGBR2_Burgers_ST_toy.cppdeletesrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Burgers2D_Conservative_DUSN.cppdeletesrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Burgers1D_Conservative_DUSU.cppdeletetest/sandbox/Solve1D_DGBR2_Burgers_toy.cppdeletetest/unit/pde/Burgers/PDEBurgers2D_btest.cppdeletetest/system/Asymptotic/ErrorOrder_1D_HDG_Burgers_btest.cppdeletesrc/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_Burgers_AV2D_DUSN.cppsrc/Python/PyDict.hd3cb1be0cd06e5f920bea6c2c9a2d52da8ce37071647523373000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduAdd dict function to DictKeyPair 2022-03-17 09:22:53 -0400d3cb1be0cd06e5f920bea6c2c9a2d52da8ce3707Add dict function to DictKeyPaireditsrc/Python/PyDict.htest/unit/IO/pde/ScalarFunction2D_pattern.txtsrc/pde/AnalyticFunction/ScalarFunction2D.cppsrc/pde/AnalyticFunction/ScalarFunction2D.htest/unit/pde/AnalyticFunction/ScalarFunction2D_btest.cpp23442fc7ad30ef04031ad2146948f86ec13937791647541255000https://acdl.mit.edu/csi/user/cwomackcwomackcwomack@mit.eduAdded Axisymmetric DBL scalar function in 2D with unit tests 2022-03-17 14:20:55 -040023442fc7ad30ef04031ad2146948f86ec1393779Added Axisymmetric DBL scalar function in 2D with unit testseditsrc/pde/AnalyticFunction/ScalarFunction2D.cppedittest/unit/pde/AnalyticFunction/ScalarFunction2D_btest.cppedittest/unit/IO/pde/ScalarFunction2D_pattern.txteditsrc/pde/AnalyticFunction/ScalarFunction2D.hscripts/vera/exclusions.txtd4494a8eefd0a3a1e6fb14c687ee766ebf2c1f5b1647541443000https://acdl.mit.edu/csi/user/cwomackcwomackcwomack@mit.eduAdded vera exclusion for ScalarFunction2D 2022-03-17 14:24:03 -0400d4494a8eefd0a3a1e6fb14c687ee766ebf2c1f5bAdded vera exclusion for ScalarFunction2Deditscripts/vera/exclusions.txtsrc/pde/sansBOOM/PDEsansBOOM.hsrc/pde/sansBOOM/BCsansBOOM.hsrc/pde/sansBOOM/ICsansBOOM.htest/unit/pde/sansBOOM/PDEsansBOOM_btest.cpptest/unit/pde/sansBOOM/OutputsansBOOM_btest.cppsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_sansBOOM.cppsrc/pde/sansBOOM/Traits_sansBOOM.hsrc/pde/sansBOOM/ICsansBOOM.cppsrc/pde/sansBOOM/CMakeLists.txtsrc/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_sansBOOM.cpptest/sandbox/Adapt2D_DGBR2_sansBOOM_toy.cppsrc/LinearAlgebra/DenseLinAlg/DynamicSize/MatMul/MatMul_Native_MatrixS_Instantiate.cppsrc/pde/sansBOOM/OutputsansBOOM.hsrc/pde/sansBOOM/BCsansBOOM.cpptest/unit/pde/sansBOOM/ICsansBOOM_btest.cpptest/unit/pde/sansBOOM/BCsansBOOM_btest.cpp0ae85f0d1cfad30b85a881341dc8bdb2746f75ae1647559459000https://acdl.mit.edu/csi/user/darmofaldarmofaldarmofal@mit.eduUpdates to sansBOOM including improved IC implementation including ability to read nearfield from a file and also more unit tests 2022-03-17 17:24:19 -06000ae85f0d1cfad30b85a881341dc8bdb2746f75aeUpdates to sansBOOM including improved IC implementation including ability to read nearfield from a file and also more unit testseditsrc/LinearAlgebra/DenseLinAlg/DynamicSize/MatMul/MatMul_Native_MatrixS_Instantiate.cppaddsrc/pde/sansBOOM/ICsansBOOM.cppedittest/sandbox/Adapt2D_DGBR2_sansBOOM_toy.cppedittest/unit/pde/sansBOOM/OutputsansBOOM_btest.cppeditsrc/pde/sansBOOM/PDEsansBOOM.heditsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_sansBOOM.cppeditsrc/pde/sansBOOM/BCsansBOOM.haddsrc/pde/sansBOOM/ICsansBOOM.heditsrc/pde/sansBOOM/BCsansBOOM.cppedittest/unit/pde/sansBOOM/BCsansBOOM_btest.cppaddtest/unit/pde/sansBOOM/ICsansBOOM_btest.cppeditsrc/pde/sansBOOM/CMakeLists.txteditsrc/pde/sansBOOM/OutputsansBOOM.heditsrc/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_sansBOOM.cppeditsrc/pde/sansBOOM/Traits_sansBOOM.hedittest/unit/pde/sansBOOM/PDEsansBOOM_btest.cppsrc/pde/NS/OutputEuler3D.hsrc/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.hsrc/UserInterfaces/BodyForceSolver_impl.h2beb4a2c98615ea4e39154c0467f04336c04a2b31647567595000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduCompressible mechanical power calculation 2022-03-17 21:39:55 -04002beb4a2c98615ea4e39154c0467f04336c04a2b3Compressible mechanical power calculationeditsrc/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.heditsrc/UserInterfaces/BodyForceSolver_impl.heditsrc/pde/NS/OutputEuler3D.hsrc/pde/sansBOOM/ICsansBOOM.cpp8bed8aed718cb1278917257511ba6f07d639c7e91647609349000https://acdl.mit.edu/csi/user/darmofaldarmofaldarmofal@mit.eduMissing a newline at end of ICsansBOOM.cpp. Fixed. 2022-03-18 07:15:49 -06008bed8aed718cb1278917257511ba6f07d639c7e9Missing a newline at end of ICsansBOOM.cpp. Fixed.editsrc/pde/sansBOOM/ICsansBOOM.cppsrc/pde/sansBOOM/BCsansBOOM.hd907ad5086c6f0c2f89f884cb6c4b78e17313ee21647635088000https://acdl.mit.edu/csi/user/darmofaldarmofaldarmofal@mit.eduMissing a return statement 2022-03-18 14:24:48 -0600d907ad5086c6f0c2f89f884cb6c4b78e17313ee2Missing a return statementeditsrc/pde/sansBOOM/BCsansBOOM.htest/sandbox/Adapt2D_DGBR2_sansBOOM_toy.cppsrc/pde/sansBOOM/PDEsansBOOM.h6dc373de9e648eb5e7c94a47f8a6ad49e474fb8f1647718620000https://acdl.mit.edu/csi/user/darmofaldarmofaldarmofal@mit.eduFound sign error in upwind flux in sansBOOM. 2022-03-19 13:37:00 -06006dc373de9e648eb5e7c94a47f8a6ad49e474fb8fFound sign error in upwind flux in sansBOOM.editsrc/pde/sansBOOM/PDEsansBOOM.hedittest/sandbox/Adapt2D_DGBR2_sansBOOM_toy.cpptest/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cppsrc/Discretization/Galerkin/JacobianFunctionalBoundaryTrace_WeightedResidual_Galerkin.h5aea4536789c33776b7ae4351132c9e205c000641647725430000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFix compile error and warnings from new clang on macOS 2022-03-19 17:30:30 -04005aea4536789c33776b7ae4351132c9e205c00064Fix compile error and warnings from new clang on macOSedittest/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cppeditsrc/Discretization/Galerkin/JacobianFunctionalBoundaryTrace_WeightedResidual_Galerkin.htest/unit/Field/Project_DG_to_CG_btest.cpp7695a562b8abed81021aec9d5b483dc244c8888a1647731440000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduRelax tolerance 2022-03-19 19:10:40 -04007695a562b8abed81021aec9d5b483dc244c8888aRelax toleranceedittest/unit/Field/Project_DG_to_CG_btest.cppsrc/Discretization/Galerkin/JacobianFunctionalBoundaryTrace_Galerkin.h82c78260ee45ebb9bbd286f5be1df19bc9c8cad31647738311000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduAnother warning fix 2022-03-19 21:05:11 -040082c78260ee45ebb9bbd286f5be1df19bc9c8cad3Another warning fixeditsrc/Discretization/Galerkin/JacobianFunctionalBoundaryTrace_Galerkin.hsrc/Discretization/DG/JacobianCell_DGBR2_Param.hsrc/Discretization/Galerkin/JacobianFunctionalInteriorTrace_Galerkin.hb70294f54d0d062881bf608c006b303aba487abb1647744674000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduA few more warning fixes 2022-03-19 22:51:14 -0400b70294f54d0d062881bf608c006b303aba487abbA few more warning fixeseditsrc/Discretization/DG/JacobianCell_DGBR2_Param.heditsrc/Discretization/Galerkin/JacobianFunctionalInteriorTrace_Galerkin.htest/unit/Discretization/HDG/AlgebraicEquationSet_Local_HDG_Triangle_AD_btest.cpptest/unit/Discretization/HDG/AlgebraicEquationSet_Local_HDG_Line_AD_btest.cpptest/unit/Discretization/DG/AlgebraicEquationSet_Local_DGBR2_Triangle_AD_btest.cppsrc/Discretization/VMSDBR2/JacobianFunctionalBoundaryTrace_VMSD_BR2.htest/unit/pde/TCNE/PDETCNEEuler1D_btest.cpptest/unit/Discretization/Galerkin/AlgebraicEquationSet_Local_Galerkin_Stabilized_Triangle_Euler_btest.cppsrc/Discretization/Galerkin/JacobianFunctionalInteriorTrace_Galerkin.htest/unit/pde/TCNE/Q1DTCNEConservative_btest.cppbf6adf4473b35082a4099230d93b4a439adb845c1647789805000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduMore warning fixes for new clang 2022-03-20 11:23:25 -0400bf6adf4473b35082a4099230d93b4a439adb845cMore warning fixes for new clangeditsrc/Discretization/Galerkin/JacobianFunctionalInteriorTrace_Galerkin.hedittest/unit/Discretization/DG/AlgebraicEquationSet_Local_DGBR2_Triangle_AD_btest.cppedittest/unit/Discretization/HDG/AlgebraicEquationSet_Local_HDG_Line_AD_btest.cppedittest/unit/pde/TCNE/PDETCNEEuler1D_btest.cppedittest/unit/Discretization/HDG/AlgebraicEquationSet_Local_HDG_Triangle_AD_btest.cppedittest/unit/pde/TCNE/Q1DTCNEConservative_btest.cppeditsrc/Discretization/VMSDBR2/JacobianFunctionalBoundaryTrace_VMSD_BR2.hedittest/unit/Discretization/Galerkin/AlgebraicEquationSet_Local_Galerkin_Stabilized_Triangle_Euler_btest.cppsrc/Discretization/VMSD/JacobianFunctionalBoundaryTrace_WeightedResidual_VMSD.h6c0c712486cb020b6d08c8c92dd6f1d78805fae71647804919000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduOne more warning fix 2022-03-20 15:35:19 -04006c0c712486cb020b6d08c8c92dd6f1d78805fae7One more warning fixeditsrc/Discretization/VMSD/JacobianFunctionalBoundaryTrace_WeightedResidual_VMSD.h.gitignore5e0143f2fa010b6c0a1066fec0b37ccc5aa06ccc1647864588000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduRemove boost libary from external and add it to gitignore 2022-03-21 08:09:48 -04005e0143f2fa010b6c0a1066fec0b37ccc5aa06cccRemove boost libary from external and add it to gitignoreedit.gitignore.idea/vcs.xml.gitignore.idea/modules.xml.idea/SANS.iml.idea/.gitignoreSANS/SANS.xcodeproj/project.xcworkspace/contents.xcworkspacedataSANS/SANS.xcodeproj/project.pbxprojconfig.idea/misc.xmlSANS/SANS.xcodeproj/project.xcworkspace/xcshareddata/IDEWorkspaceChecks.plist53b653fccebb5f84315d5ca5bb00671fefde72d81647867329000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduMore cleanup 2022-03-21 08:55:29 -040053b653fccebb5f84315d5ca5bb00671fefde72d8More cleanupdeleteSANS/SANS.xcodeproj/project.xcworkspace/contents.xcworkspacedataedit.gitignoredeleteconfigdeleteSANS/SANS.xcodeproj/project.pbxprojdelete.idea/SANS.imldelete.idea/misc.xmldeleteSANS/SANS.xcodeproj/project.xcworkspace/xcshareddata/IDEWorkspaceChecks.plistdelete.idea/modules.xmldelete.idea/.gitignoredelete.idea/vcs.xmlsrc/pde/NS/OutputEuler3D.he19c47a63fbbd9f771ed0066b6481693f301e0891647998931000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduMechanical power correction 2022-03-22 21:28:51 -0400e19c47a63fbbd9f771ed0066b6481693f301e089Mechanical power correctioneditsrc/pde/NS/OutputEuler3D.hgithttps://acdl.mit.edu/csi/user/blscblschttps://acdl.mit.edu/csi/user/cwomackcwomackhttps://acdl.mit.edu/csi/user/galbramcgalbramchttps://acdl.mit.edu/csi/user/waligurawaligurahttps://acdl.mit.edu/csi/user/allmarasallmarashttps://acdl.mit.edu/csi/user/deanna.sewelldeanna.sewellhttps://acdl.mit.edu/csi/user/shunzshunzhttps://acdl.mit.edu/csi/user/darmofaldarmofalStarted by upstream project "SANS_avro" build number 6464SANS_avrojob/SANS_avro/648e3cbb04faca2aea86a1f5165dacc6d834ede3688e3cbb04faca2aea86a1f5165dacc6d834ede368acdl/develop8e3cbb04faca2aea86a1f5165dacc6d834ede3688e3cbb04faca2aea86a1f5165dacc6d834ede368acdl/develop8e3cbb04faca2aea86a1f5165dacc6d834ede3688e3cbb04faca2aea86a1f5165dacc6d834ede368acdl/developssh://jenkins@acdl.mit.edu/home/svnroot/SANSproto/false#64322070760752SANS_avro » release_clang,reynolds #6464falsefalse64214712SUCCESS1643290325283https://acdl.mit.edu/csi/job/SANS_avro/builddir=release_clang,buildnode=reynolds/64/reynoldsgitStarted by upstream project "SANS_avro" build number 6363SANS_avrojob/SANS_avro/638e3cbb04faca2aea86a1f5165dacc6d834ede3688e3cbb04faca2aea86a1f5165dacc6d834ede368acdl/develop8e3cbb04faca2aea86a1f5165dacc6d834ede3688e3cbb04faca2aea86a1f5165dacc6d834ede368acdl/develop8e3cbb04faca2aea86a1f5165dacc6d834ede3688e3cbb04faca2aea86a1f5165dacc6d834ede368acdl/developssh://jenkins@acdl.mit.edu/home/svnroot/SANSproto/false#63504693760752SANS_avro » release_clang,reynolds #6363falsefalse63214674SUCCESS1643289368388https://acdl.mit.edu/csi/job/SANS_avro/builddir=release_clang,buildnode=reynolds/63/reynoldsgitStarted by upstream project "SANS_avro" build number 6262SANS_avrojob/SANS_avro/628e3cbb04faca2aea86a1f5165dacc6d834ede3688e3cbb04faca2aea86a1f5165dacc6d834ede368acdl/develop8e3cbb04faca2aea86a1f5165dacc6d834ede3688e3cbb04faca2aea86a1f5165dacc6d834ede368acdl/develop8e3cbb04faca2aea86a1f5165dacc6d834ede3688e3cbb04faca2aea86a1f5165dacc6d834ede368acdl/developssh://jenkins@acdl.mit.edu/home/svnroot/SANSproto/false#62335904760752SANS_avro » release_clang,reynolds #6262falsefalse62214585SUCCESS1643288558137https://acdl.mit.edu/csi/job/SANS_avro/builddir=release_clang,buildnode=reynolds/62/reynoldsgitStarted by upstream project "SANS_avro" build number 6161SANS_avrojob/SANS_avro/618e3cbb04faca2aea86a1f5165dacc6d834ede3688e3cbb04faca2aea86a1f5165dacc6d834ede368acdl/develop8e3cbb04faca2aea86a1f5165dacc6d834ede3688e3cbb04faca2aea86a1f5165dacc6d834ede368acdl/develop8e3cbb04faca2aea86a1f5165dacc6d834ede3688e3cbb04faca2aea86a1f5165dacc6d834ede368acdl/developssh://jenkins@acdl.mit.edu/home/svnroot/SANSproto/false#611807131760752SANS_avro » release_clang,reynolds #6161falsefalse61214557SUCCESS1643259517604https://acdl.mit.edu/csi/job/SANS_avro/builddir=release_clang,buildnode=reynolds/61/reynoldssrc/pde/FullPotential/PDEFullPotential3D.h5d7714000763d44b3465f1f727fca55fc6ab44311617855175000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduadded annotation 2021-04-08 00:12:55 -04005d7714000763d44b3465f1f727fca55fc6ab4431added annotationeditsrc/pde/FullPotential/PDEFullPotential3D.hsrc/pde/FullPotential/BCFullPotential3D.htest/sandbox/Solve3D_CG_FP_duct_toy.cppsrc/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.h9f584ea11fea65ea120aa465c93604879d0e21691618024224000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduintermediate commit in case of ACDL power down. sandbox still should not compile yet 2021-04-09 23:10:24 -04009f584ea11fea65ea120aa465c93604879d0e2169intermediate commit in case of ACDL power down. sandbox still should not compile yeteditsrc/pde/FullPotential/BCFullPotential3D.haddtest/sandbox/Solve3D_CG_FP_duct_toy.cppeditsrc/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.htest/unit/UnitGrids/XField3D_Box_Hex_X1_btest.cpptest/unit/UnitGrids/XField3D_Box_Hex_X1.cpptest/unit/UnitGrids/XField3D_Box_Hex_X1.h378f68231a43b8a6980cda09a0e43430753bab6d1618258142000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edurefactored 3D box hex grid to allow for arbitrary list of node coordinates 2021-04-12 16:09:02 -0400378f68231a43b8a6980cda09a0e43430753bab6drefactored 3D box hex grid to allow for arbitrary list of node coordinatesedittest/unit/UnitGrids/XField3D_Box_Hex_X1_btest.cppedittest/unit/UnitGrids/XField3D_Box_Hex_X1.cppedittest/unit/UnitGrids/XField3D_Box_Hex_X1.htest/unit/UnitGrids/XField3D_Box_Hex_X1.cpptest/unit/UnitGrids/XField3D_Box_Hex_X1_btest.cppee5b7eff23345a2f06ee4908b102bbab2220dd6c1618259477000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduadded DOF count checks in box hex grid 2021-04-12 16:31:17 -0400ee5b7eff23345a2f06ee4908b102bbab2220dd6cadded DOF count checks in box hex gridedittest/unit/UnitGrids/XField3D_Box_Hex_X1.cppedittest/unit/UnitGrids/XField3D_Box_Hex_X1_btest.cppsrc/Field/FieldArea_CG_Cell_Instantiate_3D.cpp839745e2f7985d5a5d941c31374bf1d3d1dcc9101618427700000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduadded CG field instantiation for IBL3 Qauxv field 2021-04-14 15:15:00 -0400839745e2f7985d5a5d941c31374bf1d3d1dcc910added CG field instantiation for IBL3 Qauxv fieldeditsrc/Field/FieldArea_CG_Cell_Instantiate_3D.cppsrc/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.htest/unit/UnitGrids/XField3D_Sheet_Quad_X1.cpptest/unit/UnitGrids/XField3D_Box_Hex_X1.cpp61dd5a6de54a713efeda0826ec0d36a2ffe6c6c31618427811000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduminor annotation 2021-04-14 15:16:51 -040061dd5a6de54a713efeda0826ec0d36a2ffe6c6c3minor annotationeditsrc/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.hedittest/unit/UnitGrids/XField3D_Sheet_Quad_X1.cppedittest/unit/UnitGrids/XField3D_Box_Hex_X1.cppsrc/Discretization/IntegrateBoundaryTraceGroups_FieldTrace.h43f30757177cc81552872f1acb11e39e6258654a1618451737000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edurefactoring to show intention more clearly 2021-04-14 21:55:37 -040043f30757177cc81552872f1acb11e39e6258654arefactoring to show intention more clearlyeditsrc/Discretization/IntegrateBoundaryTraceGroups_FieldTrace.hsrc/pde/FullPotential/BCFullPotential3D.h3385dd575e98604a5c550c4ccf83557fa2859d7d1618500952000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduminor cleanup 2021-04-15 11:35:52 -04003385dd575e98604a5c550c4ccf83557fa2859d7dminor cleanupeditsrc/pde/FullPotential/BCFullPotential3D.htest/unit/UnitGrids/XField3D_Box_Hex_X1_btest.cppsrc/Discretization/Galerkin/IntegrateBoundaryTrace_Dispatch_Galerkin.hsrc/Discretization/IntegrateBoundaryTrace_Dispatch.hb19152987e07efa90404e17a76f04f8ceae348a81618936302000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduminor addition of annotation 2021-04-20 12:31:42 -0400b19152987e07efa90404e17a76f04f8ceae348a8minor addition of annotationedittest/unit/UnitGrids/XField3D_Box_Hex_X1_btest.cppeditsrc/Discretization/Galerkin/IntegrateBoundaryTrace_Dispatch_Galerkin.heditsrc/Discretization/IntegrateBoundaryTrace_Dispatch.hsrc/pde/NS/Q3DEntropy.cppsrc/pde/NS/CMakeLists.txttest/unit/IO/pde/NS/Q3DEntropy_pattern.txttest/unit/pde/NS/Q3DEntropy_btest.cppsrc/pde/NS/Q3DEntropy.hd6f10b5cffc3bc5ed4038a558cb1ecded2e5a8341619026609000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.eduadded 3D entropy variables for Euler/NS 2021-04-21 10:36:49 -0700d6f10b5cffc3bc5ed4038a558cb1ecded2e5a834added 3D entropy variables for Euler/NSaddsrc/pde/NS/Q3DEntropy.heditsrc/pde/NS/CMakeLists.txtaddsrc/pde/NS/Q3DEntropy.cppaddtest/unit/pde/NS/Q3DEntropy_btest.cppaddtest/unit/IO/pde/NS/Q3DEntropy_pattern.txttest/unit/pde/NS/Q3DEntropy_btest.cppfcf44b931cef9d49733e6668ce463799552d1cc71619124490000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.eduflipped output_stream flag to true (thought this was down with last commit, but not) 2021-04-22 13:48:10 -0700fcf44b931cef9d49733e6668ce463799552d1cc7flipped output_stream flag to true (thought this was down with last commit, but not)edittest/unit/pde/NS/Q3DEntropy_btest.cppsrc/pde/NS/BCNavierStokes3D_Robin_sansLG.htest/unit/pde/NS/BCNavierStokes3D_Robin_sansLG_btest.cppc8aa910ba49d658e4bab507b8e665d399e9714e81619124613000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.eduunit tests for Robin_sansLG BCs for 3D NS 2021-04-22 13:50:13 -0700c8aa910ba49d658e4bab507b8e665d399e9714e8unit tests for Robin_sansLG BCs for 3D NSaddtest/unit/pde/NS/BCNavierStokes3D_Robin_sansLG_btest.cppeditsrc/pde/NS/BCNavierStokes3D_Robin_sansLG.htest/sandbox/Solve3D_CG_FP_duct_toy.cppa5ef3b03f893d567fc765be0d7adf5e0123c336a1619470656000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.educleaned up and fixed sandbox case on FP for S-shaped duct 2021-04-26 16:57:36 -0400a5ef3b03f893d567fc765be0d7adf5e0123c336acleaned up and fixed sandbox case on FP for S-shaped ductedittest/sandbox/Solve3D_CG_FP_duct_toy.cppsrc/Field/output_Tecplot/output_Tecplot_FP.cpptest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cpp95c6d03f2824bacc88f96c0bdf9c5837762b3d741619470868000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.educommented out hacks 2021-04-26 17:01:08 -040095c6d03f2824bacc88f96c0bdf9c5837762b3d74commented out hackseditsrc/Field/output_Tecplot/output_Tecplot_FP.cppedittest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cpptest/sandbox/Solve3D_CG_FP_duct_BCDataFields_toy.cppsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_BCDataFields.h20b3cb3d8537394be09e5b3655aa63f4e98594641619490782000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduStarting to implement BCDataFields by copying over stuff 2021-04-26 22:33:02 -040020b3cb3d8537394be09e5b3655aa63f4e9859464Starting to implement BCDataFields by copying over stuffaddtest/sandbox/Solve3D_CG_FP_duct_BCDataFields_toy.cppaddsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_BCDataFields.htest/sandbox/Solve3D_CG_FP_duct_toy.cpp9ec8c688627999d9086a8e97848423c15b84af0e1619589972000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduadded and experimented with BCDataFieldManager class. Ready to further extend this for BCDataField implementation. 2021-04-28 02:06:12 -04009ec8c688627999d9086a8e97848423c15b84af0eadded and experimented with BCDataFieldManager class. Ready to further extend this for BCDataField implementation.edittest/sandbox/Solve3D_CG_FP_duct_toy.cppsrc/Discretization/Galerkin/IntegrateBoundaryTrace_Dispatch_Galerkin.hsrc/Discretization/IntegrateBoundaryTrace_Dispatch.h44dc6852c8b985453ca3ffe1ac75a027eb8a5dcb1619623433000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduminor commenting 2021-04-28 11:23:53 -040044dc6852c8b985453ca3ffe1ac75a027eb8a5dcbminor commentingeditsrc/Discretization/Galerkin/IntegrateBoundaryTrace_Dispatch_Galerkin.heditsrc/Discretization/IntegrateBoundaryTrace_Dispatch.hsrc/Discretization/Galerkin/IntegrateBoundaryTrace_Dispatch_Galerkin.h8cf349c254dc70e90253b5e0e19bd036ff8167601619624248000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduminor refactoring before adding BC data field stuff 2021-04-28 11:37:28 -04008cf349c254dc70e90253b5e0e19bd036ff816760minor refactoring before adding BC data field stuffeditsrc/Discretization/Galerkin/IntegrateBoundaryTrace_Dispatch_Galerkin.htest/sandbox/Solve3D_CG_FP_duct_toy.cppsrc/Discretization/Galerkin/IntegrateBoundaryTrace_Dispatch_Galerkin.hsrc/Discretization/IntegrateBoundaryTrace_Dispatch.hsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin.h77976c35d89a03aaa6777d5509219f0c79eba6601619629122000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduInitial prototype of introducing BC data fields into algebraic equation set and instantiations of IntegrandBoundaryTraces 2021-04-28 12:58:42 -040077976c35d89a03aaa6777d5509219f0c79eba660Initial prototype of introducing BC data fields into algebraic equation set and instantiations of IntegrandBoundaryTracesedittest/sandbox/Solve3D_CG_FP_duct_toy.cppeditsrc/Discretization/IntegrateBoundaryTrace_Dispatch.heditsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin.heditsrc/Discretization/Galerkin/IntegrateBoundaryTrace_Dispatch_Galerkin.hsrc/Discretization/Integrand_Type.htest/sandbox/Solve3D_CG_FP_duct_toy.cppsrc/Discretization/IntegrateBoundaryTrace_Dispatch.hsrc/Discretization/Galerkin/ResidualBoundaryTrace_Dirichlet_mitLG_Galerkin.hsrc/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK_BCDataField.h9719d757faca6fb677eb593c2824a6bed4547b331619729043000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edutrying to equip IntegrandBoundaryTrace with BCDataField: succeed in contructor but failed due to preset Integrand type defi in IntegrateBoundaryTrace_Dispatch.dispatch()....now turning off all the hacks, which will be removed in the future 2021-04-29 16:44:03 -04009719d757faca6fb677eb593c2824a6bed4547b33trying to equip IntegrandBoundaryTrace with BCDataField: succeed in contructor but failed due to preset Integrand type defi in IntegrateBoundaryTrace_Dispatch.dispatch()....now turning off all the hacks, which will be removed in the futureeditsrc/Discretization/Integrand_Type.haddsrc/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK_BCDataField.heditsrc/Discretization/Galerkin/ResidualBoundaryTrace_Dirichlet_mitLG_Galerkin.hedittest/sandbox/Solve3D_CG_FP_duct_toy.cppeditsrc/Discretization/IntegrateBoundaryTrace_Dispatch.hsrc/Discretization/Galerkin/IntegrateBoundaryTrace_Dispatch_Galerkin.hsrc/pde/BCParameters.h66ec8aa796054a0c93e3b4cdf45a5338143282911619729063000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edusome tidying up 2021-04-29 16:44:23 -040066ec8aa796054a0c93e3b4cdf45a533814328291some tidying upeditsrc/pde/BCParameters.heditsrc/Discretization/Galerkin/IntegrateBoundaryTrace_Dispatch_Galerkin.hsrc/Discretization/IntegrateBoundaryTrace_Dispatch.h20ca7db03032f2dfd10de3f3e44c42552bb739231619730839000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduhide away to-be-removed stuff/hacks 2021-04-29 17:13:59 -040020ca7db03032f2dfd10de3f3e44c42552bb73923hide away to-be-removed stuff/hackseditsrc/Discretization/IntegrateBoundaryTrace_Dispatch.htest/sandbox/Solve3D_CG_FP_duct_toy.cppsrc/pde/FullPotential/PDEFullPotential3D.hsrc/pde/FullPotential/BCFullPotential3D.hsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin.hsrc/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.hsrc/pde/FullPotential/BCFullPotential3D.cppc3a393855a3cb60edf86ecc57f27b0d8d94e36a91619753304000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduRefactored 3D full potential stuff, particularly adding wall transpiration BC. Start to pave ways for including BC data field in BC class 2021-04-29 23:28:24 -0400c3a393855a3cb60edf86ecc57f27b0d8d94e36a9Refactored 3D full potential stuff, particularly adding wall transpiration BC. Start to pave ways for including BC data field in BC classedittest/sandbox/Solve3D_CG_FP_duct_toy.cppeditsrc/pde/FullPotential/PDEFullPotential3D.heditsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin.heditsrc/pde/FullPotential/BCFullPotential3D.cppeditsrc/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.heditsrc/pde/FullPotential/BCFullPotential3D.htest/sandbox/Solve3D_CG_FP_duct_toy.cpp79df9a4a68e5f7a99b4142a99faff3c4a56e3f271619922527000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduTried wall transpiration in S-duct FP case 2021-05-01 22:28:47 -040079df9a4a68e5f7a99b4142a99faff3c4a56e3f27Tried wall transpiration in S-duct FP caseedittest/sandbox/Solve3D_CG_FP_duct_toy.cpptest/sandbox/Solve3D_CG_FP_duct_toy.cppsrc/pde/FullPotential/BCFullPotential3D.ha9ec81b9dfe4429988351e53d7a818ccadd33bff1619991178000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduappend BC data field to 3D FP wall transpiration BC 2021-05-02 17:32:58 -0400a9ec81b9dfe4429988351e53d7a818ccadd33bffappend BC data field to 3D FP wall transpiration BCedittest/sandbox/Solve3D_CG_FP_duct_toy.cppeditsrc/pde/FullPotential/BCFullPotential3D.hsrc/Discretization/Galerkin/IntegrandBoundaryTrace_mitLG_Galerkin_manifold_IBL3D.hf0faf3dda60ee263cab6f3bba215c50cfe158f1a1620011717000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edurenaming variables for clarity 2021-05-02 23:15:17 -0400f0faf3dda60ee263cab6f3bba215c50cfe158f1arenaming variables for clarityeditsrc/Discretization/Galerkin/IntegrandBoundaryTrace_mitLG_Galerkin_manifold_IBL3D.hsrc/Discretization/Galerkin/JacobianBoundaryTrace_Galerkin_BCDataField.hsrc/pde/FullPotential/BCFullPotential3D.hsrc/Discretization/Galerkin/ResidualBoundaryTrace_Galerkin_BCDataField.htest/sandbox/Solve3D_CG_FP_duct_toy.cppsrc/Discretization/Galerkin/JacobianBoundaryTrace_Dispatch_Galerkin.hsrc/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.hsrc/Discretization/Galerkin/ResidualBoundaryTrace_Dispatch_Galerkin.hsrc/pde/FullPotential/BCFullPotential3D.cppsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_BCDataField.h56223f4e595ce5bef386b428683691b08eab7f6f1620146280000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduEnabled using BC data field by passing it to the BC class. Tested on full potential 3D case. Removed previous attempt of trying to let integrand class to own BC data field 2021-05-04 12:38:00 -040056223f4e595ce5bef386b428683691b08eab7f6fEnabled using BC data field by passing it to the BC class. Tested on full potential 3D case. Removed previous attempt of trying to let integrand class to own BC data fieldeditsrc/pde/FullPotential/BCFullPotential3D.haddsrc/Discretization/Galerkin/ResidualBoundaryTrace_Galerkin_BCDataField.heditsrc/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.haddsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_BCDataField.heditsrc/Discretization/Galerkin/JacobianBoundaryTrace_Dispatch_Galerkin.hedittest/sandbox/Solve3D_CG_FP_duct_toy.cppeditsrc/pde/FullPotential/BCFullPotential3D.cppeditsrc/Discretization/Galerkin/ResidualBoundaryTrace_Dispatch_Galerkin.haddsrc/Discretization/Galerkin/JacobianBoundaryTrace_Galerkin_BCDataField.hsrc/Discretization/IntegrateBoundaryTrace_Dispatch.hsrc/Discretization/Galerkin/ResidualBoundaryTrace_Dirichlet_mitLG_Galerkin.hsrc/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK_BCDataField.hsrc/Discretization/Integrand_Type.hsrc/Discretization/Galerkin/IntegrateBoundaryTrace_Dispatch_Galerkin.htest/sandbox/Solve3D_CG_FP_duct_toy.cppsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin.hc299d064f654a2a2a75c924e535fce6e31a267d01620155739000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduremoved code from a previous attempt to implement BC data field 2021-05-04 15:15:39 -0400c299d064f654a2a2a75c924e535fce6e31a267d0removed code from a previous attempt to implement BC data fieldeditsrc/Discretization/IntegrateBoundaryTrace_Dispatch.heditsrc/Discretization/Galerkin/ResidualBoundaryTrace_Dirichlet_mitLG_Galerkin.heditsrc/Discretization/Integrand_Type.heditsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin.hdeletesrc/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK_BCDataField.heditsrc/Discretization/Galerkin/IntegrateBoundaryTrace_Dispatch_Galerkin.hedittest/sandbox/Solve3D_CG_FP_duct_toy.cpptest/sandbox/Solve3D_CG_FP_duct_toy.cppsrc/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.h53160f71e0b8d79e40fba0317248055c68b4a4181620230300000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edurefactored BC data evaluation call from element 2021-05-05 11:58:20 -040053160f71e0b8d79e40fba0317248055c68b4a418refactored BC data evaluation call from elementedittest/sandbox/Solve3D_CG_FP_duct_toy.cppeditsrc/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.hsrc/Quadrature/Quadrature.hsrc/Discretization/Galerkin/IntegrandCell_ProjectFunction.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D.hsrc/Discretization/Galerkin/IntegrandCell_Project.htest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D_btest.cpp1a043f95cfef8e68aaabf4af32ba026b55be21bb1620325740000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduStarted working on Auxv projection equation for IBL+FP coupling: finished the qauxv component in the projection integrand 2021-05-06 14:29:00 -04001a043f95cfef8e68aaabf4af32ba026b55be21bbStarted working on Auxv projection equation for IBL+FP coupling: finished the qauxv component in the projection integrandeditsrc/Discretization/Galerkin/IntegrandCell_ProjectFunction.haddsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D.haddtest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D_btest.cppeditsrc/Quadrature/Quadrature.heditsrc/Discretization/Galerkin/IntegrandCell_Project.hsrc/Discretization/Galerkin/ResidualCell_Galerkin.h5e68edfc5f602237ad8a4196aa0d4ea992be29901620340933000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduminor refactoring to reduce unnecessary memory allocation 2021-05-06 18:42:13 -04005e68edfc5f602237ad8a4196aa0d4ea992be2990minor refactoring to reduce unnecessary memory allocationeditsrc/Discretization/Galerkin/ResidualCell_Galerkin.hsrc/pde/FullPotential/PDEFullPotential3D.h01367047323e4fbddd1c1a4dbc31854b03a3f9841620405286000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edumodulize velocity calculation in 3D FP solver 2021-05-07 12:34:46 -040001367047323e4fbddd1c1a4dbc31854b03a3f984modulize velocity calculation in 3D FP solvereditsrc/pde/FullPotential/PDEFullPotential3D.hsrc/Discretization/Galerkin/IntegrandInteriorTrace_SIP_Galerkin.h3721ed60f160c69c8c84ca4e9e7707b09e1c6dec1620747367000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.eduremoved const reference for interior trace groups member data and made it a copy; old version caused memory errors when called with explicit array (e.g. {0,1,2}) 2021-05-11 08:36:07 -07003721ed60f160c69c8c84ca4e9e7707b09e1c6decremoved const reference for interior trace groups member data and made it a copy;editsrc/Discretization/Galerkin/IntegrandInteriorTrace_SIP_Galerkin.hsrc/SolutionTrek/Continuation/PseudoTime/PseudoTime.hsrc/SolutionTrek/Continuation/PseudoTime/PseudoTime.cpp3a9d5f8ca64502a5fd79e97d0c970d19672bd4791620747566000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.eduadded option to return success flag if max number of iterations are reached without converging; default = false (original behavior) 2021-05-11 08:39:26 -07003a9d5f8ca64502a5fd79e97d0c970d19672bd479added option to return success flag if max number of iterations are reached without converging;editsrc/SolutionTrek/Continuation/PseudoTime/PseudoTime.heditsrc/SolutionTrek/Continuation/PseudoTime/PseudoTime.cppsrc/pde/NS/PDEEuler2D.h3f6fb13ed6c8e566318be123d4672bafddcd71021620748312000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.eduadded interface for derivedSurfaceQuantity with parameter 2021-05-11 08:51:52 -07003f6fb13ed6c8e566318be123d4672bafddcd7102added interface for derivedSurfaceQuantity with parametereditsrc/pde/NS/PDEEuler2D.hsrc/pde/FullPotential/PDEFullPotential3D.htest/sandbox/Solve3D_CG_FP_duct_toy.cppsrc/Discretization/Galerkin/ResidualCell_Galerkin.hsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_BCDataField.h99781aecc21b23b5e56578dfc91993e2426124d91620788009000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edutypo fixes 2021-05-11 22:53:29 -040099781aecc21b23b5e56578dfc91993e2426124d9typo fixeseditsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_BCDataField.heditsrc/pde/FullPotential/PDEFullPotential3D.heditsrc/Discretization/Galerkin/ResidualCell_Galerkin.hedittest/sandbox/Solve3D_CG_FP_duct_toy.cppsrc/Field/FieldArea_Instantiate_3D.cppsrc/Field/FieldArea_CG_Cell_Instantiate_3D.cppsrc/pde/IBL/QauxvInterpret3D.hcf85e04d2bb75036ed949ea6da8835b4a959754b1620788257000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduAdded new 4-variable Qauxv formulation and associated Field instantiations 2021-05-11 22:57:37 -0400cf85e04d2bb75036ed949ea6da8835b4a959754bAdded new 4-variable Qauxv formulation and associated Field instantiationseditsrc/Field/FieldArea_Instantiate_3D.cppeditsrc/pde/IBL/QauxvInterpret3D.heditsrc/Field/FieldArea_CG_Cell_Instantiate_3D.cppsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D.htest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D_btest.cppsrc/pde/IBL/Integrand_ProjectToQauxv_FullPotential3D.hsrc/pde/IBL/Residual_ProjectToQauxv_FullPotential3D.h919e6fe173900963029fcafb3861deb88e2a82371620789158000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduInitial work on Auxv equation with 3D FP solver: compiles now but needs to be completed 2021-05-11 23:12:38 -0400919e6fe173900963029fcafb3861deb88e2a8237Initial work on Auxv equation with 3D FP solver: compiles now but needs to be completedaddsrc/pde/IBL/Integrand_ProjectToQauxv_FullPotential3D.hedittest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D_btest.cppaddsrc/pde/IBL/Residual_ProjectToQauxv_FullPotential3D.heditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D.htest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D_btest.cppsrc/pde/IBL/Integrand_ProjectToQauxv_FullPotential3D.hsrc/pde/IBL/Residual_ProjectToQauxv_FullPotential3D.hbdf6001acf2053b597477d13071bcd92474d9f371620790320000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduSome cleanup on Auxv equation (with 3D FP) residual 2021-05-11 23:32:00 -0400bdf6001acf2053b597477d13071bcd92474d9f37Some cleanup on Auxv equation (with 3D FP) residualeditsrc/pde/IBL/Integrand_ProjectToQauxv_FullPotential3D.heditsrc/pde/IBL/Residual_ProjectToQauxv_FullPotential3D.heditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D.hedittest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D_btest.cppsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D.hd48acf78bc4c55c3be142ef68ad611112b8dae661620790770000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edusome more cleanup before completing Auxv equation jacobian 2021-05-11 23:39:30 -0400d48acf78bc4c55c3be142ef68ad611112b8dae66some more cleanup before completing Auxv equation jacobianeditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D.hsrc/Discretization/Galerkin/IntegrandCell_ProjectFunction.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D.hsrc/pde/AnalyticFunction/VectorFunction3D.htest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D_btest.cppsrc/pde/IBL/Integrand_ProjectToQauxv_FullPotential3D.he260c85ee836535e7e09e876383a71a3fd0c42fb1620796457000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduAuxv equation now works for a trivial test case. Now need to work out volume-surface grid connectivity 2021-05-12 01:14:17 -0400e260c85ee836535e7e09e876383a71a3fd0c42fbAuxv equation now works for a trivial test case. Now need to work out volume-surface grid connectivityeditsrc/pde/IBL/Integrand_ProjectToQauxv_FullPotential3D.heditsrc/Discretization/Galerkin/IntegrandCell_ProjectFunction.heditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D.haddsrc/pde/AnalyticFunction/VectorFunction3D.hedittest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D_btest.cpptest/unit/UnitGrids/XField3D_Sheet_Quad_X1.cpptest/sandbox/Solve3D_CG_FP_duct_BCDataFields_toy.cpp699671c002562fd02c9f871524dda89bea780fca1620847523000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduminor cleanup 2021-05-12 15:25:23 -0400699671c002562fd02c9f871524dda89bea780fcaminor cleanupedittest/unit/UnitGrids/XField3D_Sheet_Quad_X1.cppdeletetest/sandbox/Solve3D_CG_FP_duct_BCDataFields_toy.cppsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D.hsrc/pde/IBL/Residual_ProjectToQauxv_FullPotential3D.hsrc/pde/IBL/Integrand_ProjectToQauxv_FullPotential3D.h9c99a833f10ec1405906f91ae5968cc0abf16d5f1620851681000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduminor refactoring/annotation 2021-05-12 16:34:41 -04009c99a833f10ec1405906f91ae5968cc0abf16d5fminor refactoring/annotationeditsrc/pde/IBL/Residual_ProjectToQauxv_FullPotential3D.heditsrc/pde/IBL/Integrand_ProjectToQauxv_FullPotential3D.heditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D.htest/unit/UnitGrids/XField3D_BoxBoundary_Quad_X1.htest/unit/UnitGrids/CMakeLists.txtsrc/Field/FieldAssociativity.htest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D_btest.cpptest/unit/UnitGrids/XField3D_Sheet_Quad_X1.htest/unit/UnitGrids/XField3D_BoxBoundary_Quad_X1.cpp9ad34a665bfda95652725024b0cf66e5346e5ca11620969442000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduInitial work on contructing surface mesh corresponding to a boundary group of volume mesh (BoxHex). TBD: Needs nontrivial testing and interior trace groups 2021-05-14 01:17:22 -04009ad34a665bfda95652725024b0cf66e5346e5ca1Initial work on contructing surface mesh corresponding to a boundary group of volume mesh (BoxHex). TBD: Needs nontrivial testing and interior trace groupsaddtest/unit/UnitGrids/XField3D_BoxBoundary_Quad_X1.hedittest/unit/UnitGrids/XField3D_Sheet_Quad_X1.hedittest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D_btest.cppedittest/unit/UnitGrids/CMakeLists.txteditsrc/Field/FieldAssociativity.haddtest/unit/UnitGrids/XField3D_BoxBoundary_Quad_X1.cpptest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D_btest.cpp359a9fe658bc9d1179b8a073556c99267830b4dc1621277551000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduAdded nontrivial test for Auxv projection from FP solution 2021-05-17 14:52:31 -0400359a9fe658bc9d1179b8a073556c99267830b4dcAdded nontrivial test for Auxv projection from FP solutionedittest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D_btest.cppsrc/BasisFunction/TraceToCellRefCoord.h600bb7f0b813d097d3209c8dc632d7baaf5375dc1621281179000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduminor typo fix in comments 2021-05-17 15:52:59 -0400600bb7f0b813d097d3209c8dc632d7baaf5375dcminor typo fix in commentseditsrc/BasisFunction/TraceToCellRefCoord.htest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cpptest/unit/UnitGrids/XField3D_BoxBoundary_Quad_X1.cpp985bf7159ae8849e9d89ce846c237b2be5808d4d1621281406000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduAdded interior trace elements to the boundary surface mesh of BoxHex. Tried/verfified solving IBL3 on this surface mesh in the flat plate laminar BL case 2021-05-17 15:56:46 -0400985bf7159ae8849e9d89ce846c237b2be5808d4dAdded interior trace elements to the boundary surface mesh of BoxHex. Tried/verfified solving IBL3 on this surface mesh in the flat plate laminar BL caseedittest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cppedittest/unit/UnitGrids/XField3D_BoxBoundary_Quad_X1.cpptest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D_btest.cppa2cafb646cf50cdec844c68957264d65dab3cdca1621284777000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduminor cleanup 2021-05-17 16:52:57 -0400a2cafb646cf50cdec844c68957264d65dab3cdcaminor cleanupedittest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D_btest.cppsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D.htest/unit/UnitGrids/XField3D_BoxBoundary_Quad_X1.cpp695fda1ea68ad25c2b05eb37d5885a333f12c9ef1621312621000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduminor cleanup/refactoring 2021-05-18 00:37:01 -0400695fda1ea68ad25c2b05eb37d5885a333f12c9efminor cleanup/refactoringedittest/unit/UnitGrids/XField3D_BoxBoundary_Quad_X1.cppeditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D.htest/sandbox/Solve2D_DGBR2_Triangle_NavierStokes_SpaceTime_Ellipse_toy.cpp01c6d572b397b754f02f562df9fea4e6a727a3bc1629817689000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduRemoved execute permission for a .cpp file 2021-08-24 11:08:09 -040001c6d572b397b754f02f562df9fea4e6a727a3bcRemoved execute permission for a .cpp fileedittest/sandbox/Solve2D_DGBR2_Triangle_NavierStokes_SpaceTime_Ellipse_toy.cppsrc/Meshing/Pointwise/MesherInterface_Pointwise.cppdbf1b166841aaf3f9f506b3c14fdd3ff3390e0731633627859000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.edutypo fixes in Pointwise tcl script 2021-10-07 10:30:59 -0700dbf1b166841aaf3f9f506b3c14fdd3ff3390e073typo fixes in Pointwise tcl scripteditsrc/Meshing/Pointwise/MesherInterface_Pointwise.cppsrc/PanelMethod/ProjectionToQauxi_IBL.hsrc/PanelMethod/ProjectToQauxi_IBL3D.ha9e8f64751a2e1357d1d4b3a9ddf2974290f15ea1633992925000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduMinor edits 2021-10-11 18:55:25 -0400a9e8f64751a2e1357d1d4b3a9ddf2974290f15eaMinor editseditsrc/PanelMethod/ProjectToQauxi_IBL3D.heditsrc/PanelMethod/ProjectionToQauxi_IBL.hsrc/pde/IBL/ProjectToQauxi_FullPotential3D.h156e521f69fc374d540a6c317fce2445591def4c1634009951000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduAdd ProjectToQauxi equation class for coupling FP+IBL3 2021-10-11 23:39:11 -0400156e521f69fc374d540a6c317fce2445591def4cAdd ProjectToQauxi equation class for coupling FP+IBL3addsrc/pde/IBL/ProjectToQauxi_FullPotential3D.hsrc/pde/AnalyticFunction/ArrayFunction3D.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D.hsrc/pde/AnalyticFunction/VectorFunction3D.hd6f76e5b4a50dd7d10966cabb8638faf40878d911634010030000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduRename VectorFunction3D to ArrayFunction based on new naming convention 2021-10-11 23:40:30 -0400d6f76e5b4a50dd7d10966cabb8638faf40878d91Rename VectorFunction3D to ArrayFunction based on new naming conventionaddsrc/pde/AnalyticFunction/ArrayFunction3D.heditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D.hdeletesrc/pde/AnalyticFunction/VectorFunction3D.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D.htest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D_btest.cppsrc/pde/IBL/ProjectToQauxi_FullPotential3D.hsrc/pde/IBL/Integrand_ProjectToQauxi_BoundaryTracePart_FullPotential3D.h00109c232d59693ee0ec767bdcfa1463131841be1634158639000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduAdd initial framework for Auxi equation for FP-IBL3 coupling 2021-10-13 16:57:19 -040000109c232d59693ee0ec767bdcfa1463131841beAdd initial framework for Auxi equation for FP-IBL3 couplingaddsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D.haddsrc/pde/IBL/Integrand_ProjectToQauxi_BoundaryTracePart_FullPotential3D.haddtest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D_btest.cppeditsrc/pde/IBL/ProjectToQauxi_FullPotential3D.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D.hsrc/PanelMethod/AlgebraicEquationSet_ProjectToQauxi_FlatPlate3D.had0d63c2880c1061f5a63811cde0fef3c0c576fd1634158877000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduMinor cleanup 2021-10-13 17:01:17 -0400ad0d63c2880c1061f5a63811cde0fef3c0c576fdMinor cleanupeditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D.heditsrc/PanelMethod/AlgebraicEquationSet_ProjectToQauxi_FlatPlate3D.htest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D_btest.cpp3d2142c3915791a56991cb15e04322efd37823071634242138000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduadd anonymous namespace for safety 2021-10-14 16:08:58 -04003d2142c3915791a56991cb15e04322efd3782307add anonymous namespace for safetyedittest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D_btest.cppsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D.htest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D_btest.cppsrc/pde/IBL/Integrand_ProjectToQauxi_BoundaryTracePart_FullPotential3D.h15b071aeb6e317ac6c5338665f0f10a9c4960dc91634242710000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduIncluded all the necessary fields int Auxi equation for FP-IBL3 2021-10-14 16:18:30 -040015b071aeb6e317ac6c5338665f0f10a9c4960dc9Included all the necessary fields int Auxi equation for FP-IBL3editsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D.hedittest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D_btest.cppeditsrc/pde/IBL/Integrand_ProjectToQauxi_BoundaryTracePart_FullPotential3D.htest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D_btest.cppsrc/pde/IBL/Integrand_ProjectToQauxi_BoundaryTracePart_FullPotential3D.hsrc/pde/IBL/Integrand_ProjectToQauxi_FullPotential3D.hc121714448f09f7a6b284e5c3319c5663b8fcdb61634248481000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduRenamed integrand for projection to Qauxi 2021-10-14 17:54:41 -0400c121714448f09f7a6b284e5c3319c5663b8fcdb6Renamed integrand for projection to Qauxideletesrc/pde/IBL/Integrand_ProjectToQauxi_BoundaryTracePart_FullPotential3D.haddsrc/pde/IBL/Integrand_ProjectToQauxi_FullPotential3D.hedittest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D_btest.cppsrc/Field/FieldSubGroup.hf73492af358bafe679af4e5a64bdb45d30c4be4f1634745108000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduadd const qualifier just to be extra cautious 2021-10-20 11:51:48 -0400f73492af358bafe679af4e5a64bdb45d30c4be4fadd const qualifier just to be extra cautiouseditsrc/Field/FieldSubGroup.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D.hsrc/pde/IBL/Integrand_ProjectToQauxi_FullPotential3D.htest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D_btest.cppsrc/Discretization/IntegrateBoundaryTraceGroups_ProjectToQauxi_FullPotential3D.hsrc/pde/IBL/ResidualBoundaryTrace_ProjectToQauxi_FullPotential3D.hd52d6b76316872ba2d4463642efd2641b7b09e171634746019000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduInitial working prototype of projection to Qauxi without the div.(M) term 2021-10-20 12:06:59 -0400d52d6b76316872ba2d4463642efd2641b7b09e17Initial working prototype of projection to Qauxi without the div.(M) termaddsrc/pde/IBL/ResidualBoundaryTrace_ProjectToQauxi_FullPotential3D.hedittest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D_btest.cppeditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D.heditsrc/pde/IBL/Integrand_ProjectToQauxi_FullPotential3D.haddsrc/Discretization/IntegrateBoundaryTraceGroups_ProjectToQauxi_FullPotential3D.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D.htest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D_btest.cppsrc/pde/IBL/ResidualBoundaryTrace_ProjectToQauxi_FullPotential3D.h0bb96caa9cca705d76b041499148b9f5a5ab1d821634762161000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduDistinguish volume and manifold quadrature order configurations 2021-10-20 16:36:01 -04000bb96caa9cca705d76b041499148b9f5a5ab1d82Distinguish volume and manifold quadrature order configurationseditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D.hedittest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D_btest.cppeditsrc/pde/IBL/ResidualBoundaryTrace_ProjectToQauxi_FullPotential3D.htest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D_btest.cppsrc/pde/IBL/Integrand_ProjectToQauxi_FullPotential3D.hsrc/pde/IBL/IntegrandVolumeBoundaryTrace_ProjectToQauxi.h07ecbfd901f90b10193b6bf1f7045ea56beec7781634763753000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduRename integrand class for clarity 2021-10-20 17:02:33 -040007ecbfd901f90b10193b6bf1f7045ea56beec778Rename integrand class for clarityedittest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D_btest.cppdeletesrc/pde/IBL/Integrand_ProjectToQauxi_FullPotential3D.haddsrc/pde/IBL/IntegrandVolumeBoundaryTrace_ProjectToQauxi.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D.hsrc/pde/IBL/IntegrandManifoldBoundaryTrace_ProjectToQauxi.htest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D_btest.cppsrc/pde/IBL/IntegrandManifoldInteriorTrace_ProjectToQauxi.hsrc/pde/IBL/IntegrandVolumeBoundaryTrace_ProjectToQauxi.h937d1243e2f7487d8b1538dcfee8d43db7c755d91634848487000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduAdd initial API of manifold integrands for Auxi equation 2021-10-21 16:34:47 -0400937d1243e2f7487d8b1538dcfee8d43db7c755d9Add initial API of manifold integrands for Auxi equationaddsrc/pde/IBL/IntegrandManifoldBoundaryTrace_ProjectToQauxi.heditsrc/pde/IBL/IntegrandVolumeBoundaryTrace_ProjectToQauxi.hedittest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D_btest.cppaddsrc/pde/IBL/IntegrandManifoldInteriorTrace_ProjectToQauxi.heditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D.hsrc/pde/IBL/ProjectToQauxi_FullPotential3D.hsrc/pde/IBL/IntegrandManifoldBoundaryTrace_ProjectToQauxi.h47663aa778a94ae0047a1c0067a1b1b871f48cb81634854214000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduadd more details to integrand of manifold boundary trace for FP-IBL3 coupling 2021-10-21 18:10:14 -040047663aa778a94ae0047a1c0067a1b1b871f48cb8add more details to integrand of manifold boundary trace for FP-IBL3 couplingeditsrc/pde/IBL/ProjectToQauxi_FullPotential3D.heditsrc/pde/IBL/IntegrandManifoldBoundaryTrace_ProjectToQauxi.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D.hsrc/pde/IBL/ResidualBoundaryTrace_ProjectToQauxi_FullPotential3D.hsrc/pde/IBL/ResidualVolumeBoundaryTrace_ProjectToQauxi_FullPotential3D.h5bf7cf6d518a202fab9a9f0a80c77311871180bd1635179709000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edurename files/classes for clarity 2021-10-25 12:35:09 -04005bf7cf6d518a202fab9a9f0a80c77311871180bdrename files/classes for clarityeditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D.haddsrc/pde/IBL/ResidualVolumeBoundaryTrace_ProjectToQauxi_FullPotential3D.hdeletesrc/pde/IBL/ResidualBoundaryTrace_ProjectToQauxi_FullPotential3D.hsrc/Field/Element/ElementXFieldArea.h2a39277c53176e4a185716bf04fc843d275454ac1635215511000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduadd missing include 2021-10-25 22:31:51 -04002a39277c53176e4a185716bf04fc843d275454acadd missing includeeditsrc/Field/Element/ElementXFieldArea.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D.hsrc/pde/IBL/IntegrandManifoldBoundaryTrace_ProjectToQauxi.hsrc/Discretization/IntegrateBoundaryTraceGroups_ProjectToQauxi_FullPotential3D.hsrc/pde/IBL/ResidualManifoldBoundaryTrace_ProjectToQauxi_FullPotential3D.htest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D_btest.cppsrc/pde/IBL/ProjectToQauxi_FullPotential3D.h690ef09da94f375a17a82587a3bbddc87319b3541635215774000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edu[intermediate progress] compiling prototype of manifold boundary trace integrals in auxi equation for FP-IBL3 coupling 2021-10-25 22:36:14 -0400690ef09da94f375a17a82587a3bbddc87319b354[intermediate progress] compiling prototype of manifold boundary trace integrals in auxi equation for FP-IBL3 couplingeditsrc/Discretization/IntegrateBoundaryTraceGroups_ProjectToQauxi_FullPotential3D.haddsrc/pde/IBL/ResidualManifoldBoundaryTrace_ProjectToQauxi_FullPotential3D.hedittest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D_btest.cppeditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D.heditsrc/pde/IBL/IntegrandManifoldBoundaryTrace_ProjectToQauxi.heditsrc/pde/IBL/ProjectToQauxi_FullPotential3D.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D.h7883cf949f8ed87862fa9f4cdbb57f1e38c993f11635365800000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduminor edit 2021-10-27 16:16:40 -04007883cf949f8ed87862fa9f4cdbb57f1e38c993f1minor editeditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D.hsrc/Field/FieldSubGroup.h976b775eb46f35e93aec0470ceea79c7c6e01adf1635534664000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduRemoved unnecessary destructor 2021-10-29 15:11:04 -0400976b775eb46f35e93aec0470ceea79c7c6e01adfRemoved unnecessary destructoreditsrc/Field/FieldSubGroup.hsrc/pde/IBL/ResidualManifoldBoundaryTrace_ProjectToQauxi_FullPotential3D.ha4dfe6d9535f5ada070c06de20868ed0ec9e42191635535328000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edutypo fix 2021-10-29 15:22:08 -0400a4dfe6d9535f5ada070c06de20868ed0ec9e4219typo fixeditsrc/pde/IBL/ResidualManifoldBoundaryTrace_ProjectToQauxi_FullPotential3D.hsrc/Discretization/IntegrateBoundaryTraceGroups_ProjectToQauxi_FullPotential3D.hab2ad23931760b24b676b86ef0099f7daba023a31635544340000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduAccess cell group via global indexing instead of local 2021-10-29 17:52:20 -0400ab2ad23931760b24b676b86ef0099f7daba023a3Access cell group via global indexing instead of localeditsrc/Discretization/IntegrateBoundaryTraceGroups_ProjectToQauxi_FullPotential3D.hsrc/Field/FieldTypes.hsrc/Field/FieldVolume_DG_BoundaryTrace_matchAreaCell.hsrc/Field/FieldVolume_DG_BoundaryTrace_matchAreaCell_Instantiate_3D.cppsrc/Field/CMakeLists.txttest/sandbox/Solve3D_CG_FP_duct_toy.cppsrc/Field/FieldVolume_DG_BoundaryTrace_matchAreaCell_impl.htest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D_btest.cppsrc/Field/Field_DG_BoundaryTraceBase_impl.h7d181b1d2bf947531375fa84fffcf7d449d201fc1635790923000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduInitial working prototype of new Field for Qauxi for FP-IBL3 so that DOFs can be viewed as volume boundary trace and area cell at the same time 2021-11-01 14:22:03 -04007d181b1d2bf947531375fa84fffcf7d449d201fcInitial working prototype of new Field for Qauxi for FP-IBL3 so that DOFs can be viewed as volume boundary trace and area cell at the same timeaddsrc/Field/FieldVolume_DG_BoundaryTrace_matchAreaCell_impl.heditsrc/Field/CMakeLists.txteditsrc/Field/Field_DG_BoundaryTraceBase_impl.heditsrc/Field/FieldTypes.haddsrc/Field/FieldVolume_DG_BoundaryTrace_matchAreaCell.haddsrc/Field/FieldVolume_DG_BoundaryTrace_matchAreaCell_Instantiate_3D.cppedittest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D_btest.cppedittest/sandbox/Solve3D_CG_FP_duct_toy.cppsrc/pde/FullPotential/PDEFullPotential3D.h31fee2f14f667cdad5b0ae65de9589c86b82d2b81635790958000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduType-related bugfix in FP PDE 2021-11-01 14:22:38 -040031fee2f14f667cdad5b0ae65de9589c86b82d2b8Type-related bugfix in FP PDEeditsrc/pde/FullPotential/PDEFullPotential3D.hsrc/Field/FieldVolume_DG_BoundaryTrace_matchAreaCell.h22ea46550cf3a25fccc033f41500de2e970db4721635791854000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.educleaned up unused method 2021-11-01 14:37:34 -040022ea46550cf3a25fccc033f41500de2e970db472cleaned up unused methodeditsrc/Field/FieldVolume_DG_BoundaryTrace_matchAreaCell.hsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_factorize.hsrc/LinearAlgebra/AlgebraicEquationSetBase.hsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_MatrixD_CRS_MatrixD_MatrixS_Instantiate.cppsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_CRS_double.cpptest/unit/Discretization/VMSDBR2/JacobianCell_VMSD_BR2_AD_btest.cppsrc/SolutionTrek/Continuation/Homotopy/AlgebraicEquationSet_HTC.htest/unit/LinearAlgebra/SparseLinAlg/PETSc/PETSc_LinearSolver_btest.cppsrc/Discretization/IntegrateBoundaryTraceGroups_BoundaryCell.hsrc/LinearAlgebra/SparseLinAlg/Direct/UMFPACK/UMFPACKSolver_impl.hsrc/LinearAlgebra/SparseLinAlg/Preconditioners/LU_SGS.hsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_MatrixBlock_4x4_Instantiate.cppsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_MatrixD_CRS_MatrixD.cpptest/unit/Discretization/VMSDBR2/AlgebraicEquationSet_VMSDBR2_Triangle_AD_btest.cppsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_MatrixBlock_3x3_Instantiate.cppsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_backsolve.hsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver.hsrc/LinearAlgebra/SparseLinAlg/Preconditioners/Identity.hsrc/Discretization/VMSDBR2/ResidualCell_VMSD_BR2.hsrc/LinearAlgebra/SparseLinAlg/LinearSolverBase.hsrc/LinearAlgebra/SparseLinAlg/Direct/UMFPACK/UMFPACKSolver_backsolve.hsrc/LinearAlgebra/AlgebraicEquationSetBase_GloballyConstrained.hsrc/Discretization/VMSDBR2/JacobianCell_VMSD_BR2.hsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_MatrixBlock_2x2_Instantiate.cppsrc/LinearAlgebra/SparseLinAlg/Direct/UMFPACK/UMFPACKSolver_CRS_double.cppsrc/LinearAlgebra/SparseLinAlg/Direct/UMFPACK/UMFPACKSolver.hsrc/LinearAlgebra/SparseLinAlg/SparseLinAlg_LinearSolver.hsrc/Discretization/VMSDBR2/AlgebraicEquationSet_VMSD_BR2.htest/system/LocalSolve/Constrained_Solve_btest.cppsrc/LinearAlgebra/SparseLinAlg/Direct/UMFPACK/UMFPACKSolver_MatrixD_backsolve.hsrc/LinearAlgebra/SparseLinAlg/SparseLinAlg_LinearSolver.cppsrc/LinearAlgebra/SparseLinAlg/Direct/UMFPACK/UMFPACKSolver_MatrixBlock_2x2_Instantiate.cppsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_CRS_MatrixD.cppsrc/LinearAlgebra/SparseLinAlg/Direct/UMFPACK/UMFPACKSolver_CRS_MatrixD.cppsrc/LinearAlgebra/SparseLinAlg/Preconditioners/ILU0.hsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_MatrixD_CRS_MatrixS_Instantiate.cppsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_impl.hsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_CRS_MatrixD_MatrixS_Instantiate.cppsrc/LinearAlgebra/SparseLinAlg/Krylov/FGMRES.hsrc/SolutionTrek/Continuation/Homotopy/Homotopy.hfe90301b39aea9b0b80671e7fb028fbe857984981635879855000https://acdl.mit.edu/csi/user/blscblscblsc@mit.eduUpdated VMSDBR2 statically condensed Jacobian calculating to accept multiple RHS to condense using a single Jacobian calculation. Updated linear solvers for globally constrained systems to use this new functionality. Added unit tests to test that results from multiple-RHS code matches applying the single-RHS code to each RHS individually. This update will only affect globally constrained systems (using VMSDBR2). 2021-11-02 15:04:15 -0400fe90301b39aea9b0b80671e7fb028fbe85798498Updated VMSDBR2 statically condensed Jacobian calculating to accept multiple RHS to condense using a single Jacobian calculation. Updated linear solvers for globally constrained systems to use this new functionality. Added unit tests to test that results from multiple-RHS code matches applying the single-RHS code to each RHS individually. This update will only affect globally constrained systems (using VMSDBR2).editsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_MatrixD_CRS_MatrixD_MatrixS_Instantiate.cppeditsrc/LinearAlgebra/SparseLinAlg/Direct/UMFPACK/UMFPACKSolver_backsolve.heditsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_CRS_double.cppeditsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_factorize.heditsrc/LinearAlgebra/SparseLinAlg/Preconditioners/ILU0.haddtest/system/LocalSolve/Constrained_Solve_btest.cppeditsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_MatrixD_CRS_MatrixS_Instantiate.cppeditsrc/LinearAlgebra/SparseLinAlg/Preconditioners/Identity.heditsrc/SolutionTrek/Continuation/Homotopy/Homotopy.heditsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_impl.heditsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_CRS_MatrixD_MatrixS_Instantiate.cppeditsrc/Discretization/VMSDBR2/JacobianCell_VMSD_BR2.heditsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_CRS_MatrixD.cppeditsrc/Discretization/VMSDBR2/ResidualCell_VMSD_BR2.heditsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_MatrixBlock_2x2_Instantiate.cppeditsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_MatrixBlock_3x3_Instantiate.cppedittest/unit/LinearAlgebra/SparseLinAlg/PETSc/PETSc_LinearSolver_btest.cppeditsrc/LinearAlgebra/AlgebraicEquationSetBase.heditsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_MatrixBlock_4x4_Instantiate.cppeditsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_MatrixD_CRS_MatrixD.cppeditsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_backsolve.heditsrc/LinearAlgebra/AlgebraicEquationSetBase_GloballyConstrained.heditsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver.hedittest/unit/Discretization/VMSDBR2/JacobianCell_VMSD_BR2_AD_btest.cppeditsrc/Discretization/IntegrateBoundaryTraceGroups_BoundaryCell.heditsrc/LinearAlgebra/SparseLinAlg/Krylov/FGMRES.heditsrc/Discretization/VMSDBR2/AlgebraicEquationSet_VMSD_BR2.heditsrc/LinearAlgebra/SparseLinAlg/Direct/UMFPACK/UMFPACKSolver_impl.heditsrc/SolutionTrek/Continuation/Homotopy/AlgebraicEquationSet_HTC.heditsrc/LinearAlgebra/SparseLinAlg/Direct/UMFPACK/UMFPACKSolver.heditsrc/LinearAlgebra/SparseLinAlg/Direct/UMFPACK/UMFPACKSolver_CRS_double.cppeditsrc/LinearAlgebra/SparseLinAlg/LinearSolverBase.heditsrc/LinearAlgebra/SparseLinAlg/Direct/UMFPACK/UMFPACKSolver_MatrixBlock_2x2_Instantiate.cppedittest/unit/Discretization/VMSDBR2/AlgebraicEquationSet_VMSDBR2_Triangle_AD_btest.cppeditsrc/LinearAlgebra/SparseLinAlg/Direct/UMFPACK/UMFPACKSolver_CRS_MatrixD.cppeditsrc/LinearAlgebra/SparseLinAlg/Preconditioners/LU_SGS.heditsrc/LinearAlgebra/SparseLinAlg/SparseLinAlg_LinearSolver.heditsrc/LinearAlgebra/SparseLinAlg/Direct/UMFPACK/UMFPACKSolver_MatrixD_backsolve.heditsrc/LinearAlgebra/SparseLinAlg/SparseLinAlg_LinearSolver.cpptest/unit/UnitGrids/XField3D_Box_Hex_X1.cpptest/sandbox/Solve3D_CG_FP_duct_toy.cpptest/unit/UnitGrids/XField3D_BoxBoundary_Quad_X1.htest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D_btest.cpptest/unit/UnitGrids/XField3D_BoxBoundary_Quad_X1.cpptest/unit/UnitGrids/XField3D_Box_Hex_X1.h158e71463ac0629b685529a0058f13403298cda71635880943000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduHard coded manifold/surface quad grid that matches z-min boundary group of a box hex grid 2021-11-02 15:22:23 -0400158e71463ac0629b685529a0058f13403298cda7Hard coded manifold/surface quad grid that matches z-min boundary group of a box hex gridedittest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D_btest.cppedittest/unit/UnitGrids/XField3D_BoxBoundary_Quad_X1.hedittest/unit/UnitGrids/XField3D_Box_Hex_X1.cppedittest/unit/UnitGrids/XField3D_BoxBoundary_Quad_X1.cppedittest/unit/UnitGrids/XField3D_Box_Hex_X1.hedittest/sandbox/Solve3D_CG_FP_duct_toy.cppsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_BCDataField.h1fd8d4c53b7c87d4019e00134062f5ab82a1988b1635887670000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduAdded comments to BC data field implementation 2021-11-02 17:14:30 -04001fd8d4c53b7c87d4019e00134062f5ab82a1988bAdded comments to BC data field implementationeditsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_BCDataField.hsrc/Field/Field_DG_BoundaryTraceBase.hf286a7620681e196ee9fd819a28df1481f60b8111635887683000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduMinor typo fix 2021-11-02 17:14:43 -0400f286a7620681e196ee9fd819a28df1481f60b811Minor typo fixeditsrc/Field/Field_DG_BoundaryTraceBase.hsrc/Field/FieldVolume_DG_BoundaryTrace_matchAreaCell.htest/sandbox/Solve3D_CG_FP_duct_toy.cppsrc/Field/FieldVolume_DG_BoundaryTrace_matchAreaCell_impl.h3bb8153e9826f37502881e52c0f90efde6b3fe021635887777000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduRefactored DOF indexing contruction to ensure consistency between volumeb boundary trace field and area cell field 2021-11-02 17:16:17 -04003bb8153e9826f37502881e52c0f90efde6b3fe02Refactored DOF indexing contruction to ensure consistency between volumeb boundary trace field and area cell fieldeditsrc/Field/FieldVolume_DG_BoundaryTrace_matchAreaCell_impl.heditsrc/Field/FieldVolume_DG_BoundaryTrace_matchAreaCell.hedittest/sandbox/Solve3D_CG_FP_duct_toy.cppsrc/pde/FullPotential/BCFullPotential3D.hsrc/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.h00c811045c04c47c6e727fb1ba50a977c22f067d1635889182000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduRename variable for clarity. Add exception to guard against misuse of BC data in full potential wall transpiration BC 2021-11-02 17:39:42 -040000c811045c04c47c6e727fb1ba50a977c22f067dRename variable for clarity. Add exception to guard against misuse of BC data in full potential wall transpiration BCeditsrc/pde/FullPotential/BCFullPotential3D.heditsrc/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.htest/sandbox/Solve3D_CG_FP_CoupledIBL3_duct_toy.cppbc0c4626ffcb7335af4fed2b88fb4e5b106c420f1635889219000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduStart a new case of FP-IBL3 coupling by copying from existing FP-only case. 2021-11-02 17:40:19 -0400bc0c4626ffcb7335af4fed2b88fb4e5b106c420fStart a new case of FP-IBL3 coupling by copying from existing FP-only case.addtest/sandbox/Solve3D_CG_FP_CoupledIBL3_duct_toy.cppsrc/LinearAlgebra/SparseLinAlg/Direct/MKL_PARDISO/MKL_PARDISOSolver_impl.htest/system/LocalSolve/Constrained_Solve_btest.cppsrc/LinearAlgebra/SparseLinAlg/Direct/MKL_PARDISO/MKL_PARDISOSolver.h90e2a5e3233910b5c49af1001f63cdeca054d0af1635946283000https://acdl.mit.edu/csi/user/blscblscblsc@mit.eduFixed clang warnings. Fixed abstract class error due to not implementing static condensation update to MKL. Have added a developer exception so the execution path exists, but extension still not implemented for MKL. 2021-11-03 09:31:23 -040090e2a5e3233910b5c49af1001f63cdeca054d0afFixed clang warnings. Fixed abstract class error due to not implementing static condensation update to MKL. Have added a developer exception so the execution path exists, but extension still not implemented for MKL.editsrc/LinearAlgebra/SparseLinAlg/Direct/MKL_PARDISO/MKL_PARDISOSolver.heditsrc/LinearAlgebra/SparseLinAlg/Direct/MKL_PARDISO/MKL_PARDISOSolver_impl.hedittest/system/LocalSolve/Constrained_Solve_btest.cppsrc/Field/FieldArea_CG_Cell_Instantiate_3D.cppsrc/PanelMethod/AlgebraicEquationSet_ProjectToQauxi_FlatPlate3D.htest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cpp826bd930dcfa2d6cf2cfb3eefa29311db73932a31635974156000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduRefactored AES Project to Qauxi for flat plate 3D panel so that it's ready to be generalized for 3D FP coupling as well 2021-11-03 17:15:56 -0400826bd930dcfa2d6cf2cfb3eefa29311db73932a3Refactored AES Project to Qauxi for flat plate 3D panel so that it's ready to be generalized for 3D FP coupling as welleditsrc/Field/FieldArea_CG_Cell_Instantiate_3D.cppeditsrc/PanelMethod/AlgebraicEquationSet_ProjectToQauxi_FlatPlate3D.hedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cppsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_BCDataFields.ha7a251fcce59b8b62b1b4f140e06529c67319e4a1635977924000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduRemoved a deprecated header file 2021-11-03 18:18:44 -0400a7a251fcce59b8b62b1b4f140e06529c67319e4aRemoved a deprecated header filedeletesrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_BCDataFields.hsrc/LinearAlgebra/VectorType.hsrc/LinearAlgebra/NonZeroPatternType.h61f084861b81415f50d11089c17b428e65d9836c1635977975000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduAdd partial specialization to support block 4x4 FP+IBL3 coupling 2021-11-03 18:19:35 -040061f084861b81415f50d11089c17b428e65d9836cAdd partial specialization to support block 4x4 FP+IBL3 couplingeditsrc/LinearAlgebra/VectorType.heditsrc/LinearAlgebra/NonZeroPatternType.hsrc/pde/FullPotential/BCFullPotential3D.cpp8298e1ec4ec41e27375286134ab8d4b0bdab50581636000432000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduFixed missing BC parameter checks 2021-11-04 00:33:52 -04008298e1ec4ec41e27375286134ab8d4b0bdab5058Fixed missing BC parameter checkseditsrc/pde/FullPotential/BCFullPotential3D.cppsrc/Field/FieldVolume_DG_BoundaryTrace_matchAreaCell_impl.h44673cbbfa6282390d89680bae011710cf2b3a6d1636000472000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduFixed long line formatting 2021-11-04 00:34:32 -040044673cbbfa6282390d89680bae011710cf2b3a6dFixed long line formattingeditsrc/Field/FieldVolume_DG_BoundaryTrace_matchAreaCell_impl.htest/unit/LinearAlgebra/SparseLinAlg/MKL/MKL_PARDISO_btest.cpptest/system/LocalSolve/Constrained_Solve_btest.cpptest/unit/LinearAlgebra/SparseLinAlg/UMFPACK_btest.cpptest/unit/LinearAlgebra/SparseLinAlg/MKL/CMakeLists.txttest/unit/LinearAlgebra/SumConstraint_btest.htest/unit/LinearAlgebra/SparseLinAlg/PETSc/PETSc_LinearSolver_btest.cpp79bc6c8b09df920fa029959f40caacdb2bd3b97f1636052141000https://acdl.mit.edu/csi/user/blscblscblsc@mit.eduFixed more intel warnings. Added unit tests for the multi-RHS logic for UMFPack and MKL. The MKL test ensures that a developer excpetion occurs, since the logic for MKL has not been implemented. Moved the sum-constrained algebraic equation set in to its own file (like the Advection and Heat equation sets). 2021-11-04 14:55:41 -040079bc6c8b09df920fa029959f40caacdb2bd3b97fFixed more intel warnings. Added unit tests for the multi-RHS logic for UMFPack and MKL. The MKL test ensures that a developer excpetion occurs, since the logic for MKL has not been implemented. Moved the sum-constrained algebraic equation set in to its own file (like the Advection and Heat equation sets).addtest/unit/LinearAlgebra/SumConstraint_btest.hedittest/unit/LinearAlgebra/SparseLinAlg/MKL/CMakeLists.txtedittest/unit/LinearAlgebra/SparseLinAlg/MKL/MKL_PARDISO_btest.cppedittest/unit/LinearAlgebra/SparseLinAlg/UMFPACK_btest.cppedittest/system/LocalSolve/Constrained_Solve_btest.cppedittest/unit/LinearAlgebra/SparseLinAlg/PETSc/PETSc_LinearSolver_btest.cpptest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D_btest.cpptest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cpp56763c71c61086c18f8e73601980ca4d3ebadb841636087259000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduminor cleanup 2021-11-05 00:40:59 -040056763c71c61086c18f8e73601980ca4d3ebadb84minor cleanupedittest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cppedittest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D_btest.cppsrc/Discretization/Galerkin/AlgebraicEquationSet_Project.hsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective.hsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_BCDataField.h5780f2d838f975470fde0c1df309dabe2316f45f1636087453000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduAdd static data member to identify the size of jacobian (i.e. number of equations and variables) 2021-11-05 00:44:13 -04005780f2d838f975470fde0c1df309dabe2316f45fAdd static data member to identify the size of jacobian (i.e. number of equations and variables)editsrc/Discretization/Galerkin/AlgebraicEquationSet_Project.heditsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_BCDataField.heditsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective.htest/unit/Discretization/Block/CMakeLists.txtsrc/pde/IBL/PDEIBLFourEqn3D.htest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppsrc/pde/IBL/ProjectToQauxi_FullPotential3D.haa608362f9a9ca239226012cfbe4a06417e8a7911636087625000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduAdd unit test for block 4x4 system of FP-IBL3 coupling. Still a working progress, but test compiles and runs 2021-11-05 00:47:05 -0400aa608362f9a9ca239226012cfbe4a06417e8a791Add unit test for block 4x4 system of FP-IBL3 coupling. Still a working progress, but test compiles and runseditsrc/pde/IBL/ProjectToQauxi_FullPotential3D.hedittest/unit/Discretization/Block/CMakeLists.txtaddtest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppeditsrc/pde/IBL/PDEIBLFourEqn3D.htest/unit/LinearAlgebra/SparseLinAlg/MKL/MKL_PARDISO_btest.cpptest/system/LocalSolve/Constrained_Solve_btest.cpptest/unit/LinearAlgebra/SparseLinAlg/FGMRES_btest.cpp0a05e511a80ef1de336ebf90390da22172505b801636116540000https://acdl.mit.edu/csi/user/blscblscblsc@mit.eduFixed more intel warnings. Added unit tests for the multi-RHS logic for FMGRES. The FGMRES test ensures that a developer excpetion occurs, since the logic for MKL has not been implemented. 2021-11-05 08:49:00 -04000a05e511a80ef1de336ebf90390da22172505b80Fixed more intel warnings. Added unit tests for the multi-RHS logic for FMGRES. The FGMRES test ensures that a developer excpetion occurs, since the logic for MKL has not been implemented.edittest/unit/LinearAlgebra/SparseLinAlg/MKL/MKL_PARDISO_btest.cppedittest/unit/LinearAlgebra/SparseLinAlg/FGMRES_btest.cppedittest/system/LocalSolve/Constrained_Solve_btest.cppsrc/pde/IBL/IntegrandCell_ProjectToQauxi3D.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi3D.hsrc/PanelMethod/IntegrandBoundaryTrace_ProjectToQauxi3D.hsrc/PanelMethod/IntegrandInteriorTrace_ProjectToQauxi3D.hsrc/PanelMethod/ProjectToQauxi_IBL3D.hsrc/pde/IBL/IntegrandInteriorTrace_ProjectToQauxi3D.hsrc/PanelMethod/AlgebraicEquationSet_ProjectToQauxi_FlatPlate3D.hsrc/pde/IBL/IntegrandBoundaryTrace_ProjectToQauxi3D.hsrc/pde/IBL/ProjectToQauxi_FullPotential3D.hsrc/pde/NDConvert/PDENDConvertSpace3D.hba7f1991241f9a2b4435314f3b1421a714c17c2e1636174381000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduCompleted Auxi equation for FP-IBL3 coupling 2021-11-06 00:53:01 -0400ba7f1991241f9a2b4435314f3b1421a714c17c2eCompleted Auxi equation for FP-IBL3 couplingeditsrc/PanelMethod/ProjectToQauxi_IBL3D.haddsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi3D.haddsrc/pde/IBL/IntegrandInteriorTrace_ProjectToQauxi3D.heditsrc/PanelMethod/AlgebraicEquationSet_ProjectToQauxi_FlatPlate3D.hdeletesrc/PanelMethod/IntegrandBoundaryTrace_ProjectToQauxi3D.haddsrc/pde/IBL/IntegrandBoundaryTrace_ProjectToQauxi3D.hdeletesrc/PanelMethod/IntegrandInteriorTrace_ProjectToQauxi3D.heditsrc/pde/NDConvert/PDENDConvertSpace3D.heditsrc/pde/IBL/ProjectToQauxi_FullPotential3D.haddsrc/pde/IBL/IntegrandCell_ProjectToQauxi3D.hsrc/Discretization/Block/AlgebraicEquationSet_Block4x4_impl.htest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppsrc/Discretization/Block/AlgebraicEquationSet_Block3x3_impl.ha5cbd2b403a9a351e1c6c35bd84563df6ac22b731636434682000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduFix a bug in block 3x3 and 4x4 system of equations: MatrixSize(). It has been identified because perviously block (2,1) is decoupled/zero for previous test cases 2021-11-09 00:11:22 -0500a5cbd2b403a9a351e1c6c35bd84563df6ac22b73Fix a bug in block 3x3 and 4x4 system of equations: MatrixSize(). It has been identified because perviously block (2,1) is decoupled/zero for previous test caseseditsrc/Discretization/Block/AlgebraicEquationSet_Block4x4_impl.hedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppeditsrc/Discretization/Block/AlgebraicEquationSet_Block3x3_impl.htest/unit/Discretization/jacobianPingTest_btest.hd66a27b72db70635686a516c4ed8b36c204226331636434780000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduRefactor jacobian ping test screen output for clarity 2021-11-09 00:13:00 -0500d66a27b72db70635686a516c4ed8b36c20422633Refactor jacobian ping test screen output for clarityedittest/unit/Discretization/jacobianPingTest_btest.hsrc/Discretization/JacobianParam_Local.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi3D.hsrc/Discretization/DG/AlgebraicEquationSet_DGBR2_impl.hsrc/Discretization/JacobianParam.htest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppsrc/Discretization/JacobianParam_impl.hsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective_impl.hc5057f2b9a57380502da35d5fa133944ae4d4e8b1636436542000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduRefactor JacobianParam to allow for multiple parameters of different dimension, e.g. for Auxi equation of FP-IBL3 coupling 2021-11-09 00:42:22 -0500c5057f2b9a57380502da35d5fa133944ae4d4e8bRefactor JacobianParam to allow for multiple parameters of different dimension, e.g. for Auxi equation of FP-IBL3 couplingeditsrc/Discretization/JacobianParam_impl.heditsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective_impl.heditsrc/Discretization/JacobianParam_Local.heditsrc/Discretization/DG/AlgebraicEquationSet_DGBR2_impl.heditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi3D.hedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppeditsrc/Discretization/JacobianParam.htest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi3D.htest/unit/Discretization/jacobianPingTest_btest.h3955da251827fcec82c5ac2ac8f09fad0e42be181636441456000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduPass block 4x4 block algebraic equation set unit test without coupling for FP and Auxv equations 2021-11-09 02:04:16 -05003955da251827fcec82c5ac2ac8f09fad0e42be18Pass block 4x4 block algebraic equation set unit test without coupling for FP and Auxv equationsedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppeditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi3D.hedittest/unit/Discretization/jacobianPingTest_btest.hsrc/LinearAlgebra/SparseLinAlg/SparseNonZeroPattern.hd1d8c18761e61126d3865ce2fee9e240eb66a3531636472016000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduadd const qualifiers 2021-11-09 10:33:36 -0500d1d8c18761e61126d3865ce2fee9e240eb66a353add const qualifierseditsrc/LinearAlgebra/SparseLinAlg/SparseNonZeroPattern.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi3D.h491cb67bdb63473d6e2c1f69feb76020e2947d4d1636474311000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduAdd annotation to AES_Auxi 2021-11-09 11:11:51 -0500491cb67bdb63473d6e2c1f69feb76020e2947d4dAdd annotation to AES_Auxieditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi3D.htest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi3D.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv3D.h5d60333117ee0758d24c12d8e9ced0f7a0bb794e1636475242000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduRemove redundant class template arguments 2021-11-09 11:27:22 -05005d60333117ee0758d24c12d8e9ced0f7a0bb794eRemove redundant class template argumentsaddsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv3D.hedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppeditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi3D.hsrc/Meshing/EGADS/Airfoils/QuadCamber.cppsrc/Field/NormalField/NormalField.hsrc/pde/AdvectionDiffusion/PDEAdvectionDiffusion1D.hsrc/Discretization/Galerkin/IntegrandCell_Galerkin_Stabilized.hsrc/pde/NS/PDEEulermitAVDiffusion3D.hsrc/Meshing/EGADS/Airfoils/CubicCamber.cpptest/sandbox/Solve2D_CGStabilized_Triangle_NavierStokes_Joukowski_toy.cppsrc/Discretization/Galerkin/IntegrandCell_Galerkin_Stabilized_Corrected.hsrc/Meshing/EGADS/RotorSource/ParametricBody.htest/sandbox/Adapt2D_CGStabilized_Triangle_RANSSA_Joukowski_Transonic_ArtificialViscosity_toy.cppsrc/Discretization/Galerkin/IntegrandCell_Galerkin_StrongForm_Stabilized.htest/unit/pde/Lorenz/PDELorenz_btest.cppsrc/Meshing/EGADS/EGBezierCurve.cpptest/sandbox/Solve2D_HDG_Triangle_NavierStokes_Joukowski_toy.cpptest/sandbox/Adapt2D_Galerkin_Stabilized_RANSSA_Joukowski_toy.cpptest/unit/Meshing/EGADS/QuadCamber_btest.cpptest/unit/Meshing/EGADS/CamberBlade_btest.cppsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver.hsrc/Meshing/EGADS/RotorSource/ThicknessBlade.htest/unit/Discretization/Galerkin/IntegrandCell_Galerkin_Stabilized_AD_btest.cpptest/sandbox/ErrorOrder_2D_Galerkin_Stabilized_Lifted_Triangle_AD_toy.cpptest/sandbox/Solve4D_Galerkin_Stabilized_AD_ST_toy.cpptest/sandbox/ErrorOrder_1D_Galerkin_Stabilized_AD_DoubleBL_toy.cppsrc/pde/NS/PDERANSSA3D.hsrc/Meshing/EGADS/RotorSource/CubicCamber.htest/unit/pde/NS/PDEEulermitAVDiffusion3D_RotorSource_btest.cpptest/system/CodeConsistency/PDEmitAVSensor2D_Consistency_RANSSA_btest.cppsrc/pde/NS/BCRANSSA3D_mitState.htest/sandbox/Adapt3D_Galerkin_Stabilized_NavierStokes_FlatPlate_toy.cppsrc/Meshing/EGADS/EGApproximateCurve.cppsrc/Meshing/EGADS/RotorSource/QuadCamber.cpptest/sandbox/Adapt2D_Galerkin_Stabilized_AD_DoubleBoundaryLayer_toy.cppsrc/Meshing/EGADS/EGBezierCurve.hsrc/pde/NS/BCEuler3D_mitState.htest/sandbox/Adapt3D_Galerkin_Stabilized_AD_ST_toy.cppsrc/Meshing/EGADS/Airfoils/QuadCamber.hsrc/Meshing/EGADS/Airfoils/CamberBlade.cppsrc/pde/SourceOnly/PDESourceOnly2D.hsrc/pde/NS/PDEEuler2D.hsrc/pde/NDConvert/PDENDConvertSpace1D.hsrc/pde/NS/BCEulermitAVSensor3D.htest/unit/pde/NS/PDEEuler2D_btest.cppsrc/pde/AdvectionDiffusion/PDEAdvectionDiffusion3D.hsrc/LinearAlgebra/DenseLinAlg/DynamicSize/MatMul/MatMul_Native_Real.cppsrc/Meshing/EGADS/RotorSource/BladeParams.cppsrc/Meshing/EGADS/RotorSource/ThicknessBlade.cppsrc/pde/NDConvert/PDENDConvertSpaceTime3D.hsrc/pde/ArtificialViscosity/AVSensor_Source3D.htest/unit/Meshing/EGADS/CubicCamber_btest.cppsrc/Meshing/EGADS/EGNode.hsrc/Meshing/EGADS/Airfoils/CamberBlade.htest/unit/pde/NS/PDERANSSA3D_btest.cppsrc/Meshing/EGADS/RotorSource/ThicknessNACA6.cppsrc/pde/SourceOnly/PDESourceOnly3D.hsrc/pde/NS/PDEEuler3D_RotorSource.hsrc/Meshing/EGADS/EGNode.cpptest/unit/pde/NS/PDERANSSA2D_btest.cpptest/unit/pde/PorousMedia/PDETwoPhase2D_btest.cpptest/sandbox/Solve2D_VMSDBR2_Triangle_RANSSA_Joukowski_toy.cppsrc/Meshing/EGADS/Airfoils/CubicCamber.htest/sandbox/Solve2D_VMSD_Triangle_NavierStokes_Joukowski_toy.cpptest/unit/Meshing/EGADS/ThicknessNACA6_btest.cpptest/unit/Field/Field3D_CG_Tetrahedron_btest.cppsrc/pde/NS/PDEEulermitAVDiffusion2D.htest/sandbox/Adapt2D_Galerkin_Stabilized_AD_Pollutant_toy.cpptest/system/CodeConsistency/PDEEulermitAVDiffusion2D_RANSSA_Consistency_btest.cppsrc/Field/FieldVolume_DG_Cell_Instantiate_3D.cppsrc/Meshing/EGADS/RotorSource/Rotor.hsrc/Discretization/Galerkin/Stabilization_Galerkin.hsrc/Field/ElementCounter.hsrc/Field/FieldVolume_CG_Cell_Instantiate_3D.cpptest/sandbox/ErrorOrder_1D_Galerkin_Stabilized_AD_Oliver_toy.cppsrc/pde/ArtificialViscosity/AVSensor_AdvectiveFlux3D.hsrc/Adaptation/MOESS/SolverInterface_AGLS_LiftedBoundary.hsrc/pde/NS/PDERANSSA2D.htest/unit/pde/NS/PDEEuler3D_RotorSource_btest.cppsrc/pde/NDConvert/PDENDConvertSpaceTime1D.hsrc/pde/ArtificialViscosity/PDEmitAVSensor3D.htest/sandbox/Solve2D_CGStabilized_Triangle_NavierStokes_OjedaMMS_toy.cppsrc/Meshing/EGADS/CMakeLists.txttest/sandbox/Solve2D_DGBR2_Triangle_NavierStokes_Joukowski_toy.cppsrc/Meshing/EGADS/RotorSource/CamberBlade.cpptest/unit/Field/NormalField_btest.cpptest/sandbox/Adapt2D_Galerkin_Stabilized_NavierStokes_Joukowski_toy.cppsrc/UserInterfaces/BodyForceSolver.hsrc/pde/NS/BCNavierStokes3D_mitState.htest/sandbox/Adapt2D_Galerkin_Stabilized_AR_toy.cppsrc/pde/NDConvert/PDENDConvertSpace2D.hsrc/Meshing/EGADS/RotorSource/QuadCamber.hsrc/Meshing/EGADS/RotorSource/CamberBlade.hsrc/Discretization/Galerkin/IntegrandBoundaryTrace_Flux_mitState_Nitsche.hsrc/pde/NS/PDEEuler3D.hsrc/pde/Lorenz/PDELorenz.htest/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cpptest/unit/Discretization/Galerkin/IntegrandCell_Galerkin_Stabilized_NS_btest.cpptest/sandbox/ErrorOrder_2D_Galerkin_Stabilized_Triangle_AD_toy.cppsrc/pde/PorousMedia/PDETwoPhase2D.htest/unit/Discretization/Galerkin/JacobianCell_Galerkin_Stabilized_NS_btest.cppsrc/Field/FieldVolume_Instantiate_3D.cppsrc/pde/ArtificialViscosity/AVSensor_ViscousFlux3D.hsrc/Meshing/EGADS/RotorSource/CubicCamber.nbsrc/Discretization/Galerkin/IntegrandCell_Galerkin_Output_Stabilized.hsrc/Meshing/EGADS/Airfoils/CubicCamber.nbsrc/Field/NormalField/NormalField_Volume.cppsrc/Adaptation/MOESS/SolverInterface_AGLS.htest/sandbox/Solve3D_Galerkin_Stabilized_AD_ST_toy.cpptest/sandbox/Solve2D_CGStabilized_Triangle_RANSSA_Joukowski_toy.cpptest/sandbox/Adapt2D_Galerkin_Stabilized_Lifted_AD_DoubleBoundaryLayer_toy.cpptest/sandbox/Adapt2D_VMSD_AD_DoubleBoundaryLayer_toy.cppsrc/LinearAlgebra/DenseLinAlg/StaticSize/MatrixS_Decompose_LUP_Surreal_Instantiate.cppsrc/pde/IncompressibleNS/PDEIncompressibleRANSSA1DChannel.htest/sandbox/Solve2D_CGStabilized_Lifted_Triangle_NavierStokes_Joukowski_toy.cppsrc/Meshing/EGADS/RotorSource/ThicknessNACA6.hsrc/Meshing/EGADS/EGApproximateCurve.hsrc/LinearAlgebra/DenseLinAlg/StaticSize/MatrixS_InverseLUP_Surreal_Instantiate.cppsrc/Meshing/EGADS/RotorSource/CubicCamber.cppsrc/LinearAlgebra/DenseLinAlg/DynamicSize/MatrixD_InverseLU_Real_Instantiate.cppsrc/pde/AdvectionDiffusion/PDEAdvectionDiffusion2D.hsrc/Field/output_Tecplot/output_Tecplot_RotorSource.cppsrc/pde/NDConvert/PDENDConvertSpaceTime2D.hsrc/pde/ArtificialViscosity/PDEmitAVSensor2D.htest/sandbox/Adapt2D_Galerkin_Stabilized_NavierStokes_FlatPlate_toy.cpptest/unit/Discretization/Galerkin/IntegrandCell_Galerkin_Output_Stabilized_AD_btest.cpptest/sandbox/Solve4D_Galerkin_Stabilized_AD_ST_SquareChannel_toy.cppsrc/Meshing/EGADS/Airfoils/Camberline.hsrc/Meshing/EGADS/RotorSource/BladeParams.hsrc/UserInterfaces/BodyForceSolver_impl.hsrc/Meshing/EGADS/RotorSource/Rotor.cppsrc/pde/NDConvert/PDENDConvertSpace3D.ha9f685acc0ac1d4190067e4ae2aa2c8f40dde2081636478345000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduRemove AGLS. Add blockage and viscous terms to RotorSource. 2021-11-09 12:19:05 -0500a9f685acc0ac1d4190067e4ae2aa2c8f40dde208Remove AGLS. Add blockage and viscous terms to RotorSource.addsrc/Meshing/EGADS/RotorSource/ThicknessBlade.hedittest/sandbox/Solve2D_DGBR2_Triangle_NavierStokes_Joukowski_toy.cppeditsrc/Field/NormalField/NormalField.heditsrc/Discretization/Galerkin/IntegrandCell_Galerkin_StrongForm_Stabilized.heditsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver.hedittest/sandbox/Solve2D_VMSDBR2_Triangle_RANSSA_Joukowski_toy.cppedittest/unit/Field/Field3D_CG_Tetrahedron_btest.cppeditsrc/pde/NS/PDEEuler2D.heditsrc/pde/ArtificialViscosity/AVSensor_Source3D.hedittest/unit/Field/NormalField_btest.cppeditsrc/pde/AdvectionDiffusion/PDEAdvectionDiffusion2D.hedittest/system/CodeConsistency/PDEEulermitAVDiffusion2D_RANSSA_Consistency_btest.cppeditsrc/pde/NS/PDEEuler3D_RotorSource.hedittest/sandbox/Adapt2D_Galerkin_Stabilized_AD_Pollutant_toy.cppedittest/sandbox/Solve2D_CGStabilized_Triangle_RANSSA_Joukowski_toy.cppeditsrc/Meshing/EGADS/EGBezierCurve.cppeditsrc/pde/PorousMedia/PDETwoPhase2D.hedittest/unit/Discretization/Galerkin/IntegrandCell_Galerkin_Stabilized_AD_btest.cppdeletetest/sandbox/Solve2D_CGStabilized_Lifted_Triangle_NavierStokes_Joukowski_toy.cppdeletesrc/Meshing/EGADS/Airfoils/QuadCamber.heditsrc/Field/output_Tecplot/output_Tecplot_RotorSource.cppeditsrc/Discretization/Galerkin/IntegrandCell_Galerkin_Stabilized_Corrected.hedittest/sandbox/Adapt2D_VMSD_AD_DoubleBoundaryLayer_toy.cppeditsrc/Meshing/EGADS/CMakeLists.txteditsrc/pde/SourceOnly/PDESourceOnly3D.hedittest/sandbox/ErrorOrder_2D_Galerkin_Stabilized_Triangle_AD_toy.cppedittest/system/CodeConsistency/PDEmitAVSensor2D_Consistency_RANSSA_btest.cppaddsrc/Meshing/EGADS/RotorSource/CamberBlade.heditsrc/pde/NS/PDERANSSA2D.haddsrc/Meshing/EGADS/RotorSource/BladeParams.cppeditsrc/pde/IncompressibleNS/PDEIncompressibleRANSSA1DChannel.hedittest/sandbox/Solve2D_HDG_Triangle_NavierStokes_Joukowski_toy.cppeditsrc/Meshing/EGADS/EGNode.haddtest/unit/Meshing/EGADS/ThicknessNACA6_btest.cppeditsrc/LinearAlgebra/DenseLinAlg/DynamicSize/MatrixD_InverseLU_Real_Instantiate.cppeditsrc/Field/FieldVolume_CG_Cell_Instantiate_3D.cppeditsrc/Discretization/Galerkin/Stabilization_Galerkin.haddsrc/Meshing/EGADS/RotorSource/ThicknessNACA6.hedittest/unit/pde/PorousMedia/PDETwoPhase2D_btest.cppeditsrc/pde/Lorenz/PDELorenz.heditsrc/pde/NDConvert/PDENDConvertSpace1D.hedittest/sandbox/Solve2D_VMSD_Triangle_NavierStokes_Joukowski_toy.cppdeletetest/sandbox/ErrorOrder_2D_Galerkin_Stabilized_Lifted_Triangle_AD_toy.cppaddsrc/Meshing/EGADS/RotorSource/CamberBlade.cppeditsrc/pde/NDConvert/PDENDConvertSpace3D.heditsrc/pde/NS/BCNavierStokes3D_mitState.haddsrc/Meshing/EGADS/RotorSource/CubicCamber.nbeditsrc/pde/NS/PDEEulermitAVDiffusion3D.heditsrc/pde/NS/PDEEulermitAVDiffusion2D.heditsrc/pde/ArtificialViscosity/AVSensor_AdvectiveFlux3D.hedittest/sandbox/Adapt2D_Galerkin_Stabilized_AR_toy.cppeditsrc/Meshing/EGADS/EGApproximateCurve.hedittest/sandbox/ErrorOrder_1D_Galerkin_Stabilized_AD_DoubleBL_toy.cppedittest/sandbox/Solve2D_CGStabilized_Triangle_NavierStokes_Joukowski_toy.cppaddsrc/Meshing/EGADS/RotorSource/CubicCamber.haddsrc/Meshing/EGADS/RotorSource/Rotor.cppaddsrc/Meshing/EGADS/RotorSource/Rotor.hedittest/sandbox/Adapt2D_Galerkin_Stabilized_AD_DoubleBoundaryLayer_toy.cppedittest/unit/Discretization/Galerkin/IntegrandCell_Galerkin_Stabilized_NS_btest.cppaddsrc/Meshing/EGADS/RotorSource/QuadCamber.hedittest/unit/pde/Lorenz/PDELorenz_btest.cppeditsrc/Field/FieldVolume_DG_Cell_Instantiate_3D.cppeditsrc/pde/NDConvert/PDENDConvertSpaceTime3D.heditsrc/pde/AdvectionDiffusion/PDEAdvectionDiffusion1D.heditsrc/LinearAlgebra/DenseLinAlg/StaticSize/MatrixS_Decompose_LUP_Surreal_Instantiate.cppaddsrc/Meshing/EGADS/RotorSource/BladeParams.heditsrc/pde/ArtificialViscosity/PDEmitAVSensor2D.hedittest/sandbox/Adapt3D_Galerkin_Stabilized_NavierStokes_FlatPlate_toy.cppedittest/sandbox/Solve2D_CGStabilized_Triangle_NavierStokes_OjedaMMS_toy.cppeditsrc/Meshing/EGADS/EGApproximateCurve.cppdeletesrc/Adaptation/MOESS/SolverInterface_AGLS.heditsrc/Field/FieldVolume_Instantiate_3D.cppeditsrc/Field/ElementCounter.hdeletesrc/Meshing/EGADS/Airfoils/CamberBlade.cppeditsrc/Field/NormalField/NormalField_Volume.cppedittest/unit/Meshing/EGADS/CamberBlade_btest.cppeditsrc/pde/NS/BCEuler3D_mitState.haddsrc/Meshing/EGADS/RotorSource/QuadCamber.cppeditsrc/UserInterfaces/BodyForceSolver_impl.hedittest/unit/pde/NS/PDEEuler2D_btest.cppeditsrc/pde/NDConvert/PDENDConvertSpaceTime1D.hedittest/sandbox/Solve4D_Galerkin_Stabilized_AD_ST_SquareChannel_toy.cppeditsrc/pde/NS/BCRANSSA3D_mitState.hedittest/unit/pde/NS/PDERANSSA3D_btest.cppaddsrc/Meshing/EGADS/RotorSource/ThicknessNACA6.cppedittest/unit/Meshing/EGADS/CubicCamber_btest.cppdeletesrc/Meshing/EGADS/Airfoils/CubicCamber.nbedittest/sandbox/Adapt2D_Galerkin_Stabilized_NavierStokes_FlatPlate_toy.cppeditsrc/Discretization/Galerkin/IntegrandBoundaryTrace_Flux_mitState_Nitsche.heditsrc/LinearAlgebra/DenseLinAlg/StaticSize/MatrixS_InverseLUP_Surreal_Instantiate.cppedittest/sandbox/Adapt3D_Galerkin_Stabilized_AD_ST_toy.cppedittest/sandbox/Adapt2D_Galerkin_Stabilized_NavierStokes_Joukowski_toy.cppedittest/unit/pde/NS/PDEEuler3D_RotorSource_btest.cppeditsrc/pde/ArtificialViscosity/AVSensor_ViscousFlux3D.hedittest/sandbox/Solve4D_Galerkin_Stabilized_AD_ST_toy.cppedittest/sandbox/Adapt2D_CGStabilized_Triangle_RANSSA_Joukowski_Transonic_ArtificialViscosity_toy.cppedittest/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cppaddsrc/Meshing/EGADS/RotorSource/CubicCamber.cppeditsrc/pde/NS/BCEulermitAVSensor3D.heditsrc/pde/NDConvert/PDENDConvertSpace2D.hdeletesrc/Adaptation/MOESS/SolverInterface_AGLS_LiftedBoundary.hdeletesrc/Meshing/EGADS/Airfoils/QuadCamber.cppeditsrc/pde/NDConvert/PDENDConvertSpaceTime2D.hedittest/sandbox/Adapt2D_Galerkin_Stabilized_RANSSA_Joukowski_toy.cppeditsrc/pde/AdvectionDiffusion/PDEAdvectionDiffusion3D.heditsrc/Meshing/EGADS/EGNode.cppaddsrc/Meshing/EGADS/RotorSource/ThicknessBlade.cppedittest/unit/Discretization/Galerkin/JacobianCell_Galerkin_Stabilized_NS_btest.cppaddtest/unit/pde/NS/PDEEulermitAVDiffusion3D_RotorSource_btest.cppedittest/unit/pde/NS/PDERANSSA2D_btest.cppeditsrc/pde/NS/PDERANSSA3D.hdeletesrc/Meshing/EGADS/Airfoils/CamberBlade.hdeletetest/sandbox/Adapt2D_Galerkin_Stabilized_Lifted_AD_DoubleBoundaryLayer_toy.cppedittest/sandbox/Solve3D_Galerkin_Stabilized_AD_ST_toy.cppeditsrc/pde/SourceOnly/PDESourceOnly2D.heditsrc/Discretization/Galerkin/IntegrandCell_Galerkin_Output_Stabilized.hdeletesrc/Meshing/EGADS/Airfoils/CubicCamber.hdeletesrc/Meshing/EGADS/Airfoils/CubicCamber.cppdeletesrc/Meshing/EGADS/Airfoils/Camberline.hedittest/unit/Meshing/EGADS/QuadCamber_btest.cppeditsrc/pde/NS/PDEEuler3D.heditsrc/Discretization/Galerkin/IntegrandCell_Galerkin_Stabilized.heditsrc/pde/ArtificialViscosity/PDEmitAVSensor3D.heditsrc/UserInterfaces/BodyForceSolver.haddsrc/Meshing/EGADS/RotorSource/ParametricBody.hedittest/sandbox/ErrorOrder_1D_Galerkin_Stabilized_AD_Oliver_toy.cppeditsrc/Meshing/EGADS/EGBezierCurve.heditsrc/LinearAlgebra/DenseLinAlg/DynamicSize/MatMul/MatMul_Native_Real.cppedittest/unit/Discretization/Galerkin/IntegrandCell_Galerkin_Output_Stabilized_AD_btest.cppsrc/Field/NormalField/NormalField.hc10414eae7caaef3245bd20fa359c33213ef42121636479876000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduMissed a file 2021-11-09 12:44:36 -0500c10414eae7caaef3245bd20fa359c33213ef4212Missed a fileeditsrc/Field/NormalField/NormalField.htest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D_btest.cppsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D.hsrc/pde/IBL/Integrand_ProjectToQauxv_FullPotential3D.h3556222b51dd653063287deb61cb328458b047c61636488152000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduRefator AES_auxv mass matrix jacobian computation for clarity and simplicity 2021-11-09 15:02:32 -05003556222b51dd653063287deb61cb328458b047c6Refator AES_auxv mass matrix jacobian computation for clarity and simplicityeditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D.hedittest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D_btest.cppeditsrc/pde/IBL/Integrand_ProjectToQauxv_FullPotential3D.hsrc/pde/NS/BCEulermitAVSensor3D.hsrc/pde/NS/BCRANSSA3D_mitState.hsrc/Discretization/VMSDBR2/FunctionalBoundaryTrace_VMSD_BR2.hsrc/pde/NS/BCNavierStokes3D_mitState.h3d86ee59bf16fa537ed39d825ada5935b845cd9f1636491438000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduBC fixes 2021-11-09 15:57:18 -05003d86ee59bf16fa537ed39d825ada5935b845cd9fBC fixeseditsrc/pde/NS/BCRANSSA3D_mitState.heditsrc/Discretization/VMSDBR2/FunctionalBoundaryTrace_VMSD_BR2.heditsrc/pde/NS/BCEulermitAVSensor3D.heditsrc/pde/NS/BCNavierStokes3D_mitState.hsrc/Meshing/EGADS/RotorSource/ThicknessNACA6.cpptest/unit/Meshing/EGADS/ThicknessNACA6_btest.cppb3514e827f50d2081b92f11cb72f874587144ab51636491996000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFix include 2021-11-09 16:06:36 -0500b3514e827f50d2081b92f11cb72f874587144ab5Fix includeeditsrc/Meshing/EGADS/RotorSource/ThicknessNACA6.cppedittest/unit/Meshing/EGADS/ThicknessNACA6_btest.cppsrc/pde/NS/BCRANSSA3D_mitState.hsrc/pde/NS/BCEuler3D_mitState.ha0c70c3e621234b8069ee20de3963abbd5ecdbfa1636501380000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduMore boundary condition cleanup 2021-11-09 18:43:00 -0500a0c70c3e621234b8069ee20de3963abbd5ecdbfaMore boundary condition cleanupeditsrc/pde/NS/BCRANSSA3D_mitState.heditsrc/pde/NS/BCEuler3D_mitState.htest/unit/Meshing/EGADS/ThicknessNACA6_btest.cpp1756cddb43aefdf62dcdaa55b4952960369dd0e21636511591000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduRelax tolerance 2021-11-09 21:33:11 -05001756cddb43aefdf62dcdaa55b4952960369dd0e2Relax toleranceedittest/unit/Meshing/EGADS/ThicknessNACA6_btest.cpptest/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cppf4757cc1d0f6154fdfb9a2369d7211e2eb0e01471636511701000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduWarning fix 2021-11-09 21:35:01 -0500f4757cc1d0f6154fdfb9a2369d7211e2eb0e0147Warning fixedittest/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cppsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi3D.hsrc/pde/IBL/JacobianParam_ProjectToQauxv_Qinv.hsrc/pde/FullPotential/PDEFullPotential3D.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D.htest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cpptest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D_btest.cppsrc/pde/IBL/Integrand_ProjectToQauxv_FullPotential3D.h2e8d0ef89e00962727da754b8a541c319c998cd31636515824000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduAuxi parameter jacobian is now compiling. 2021-11-09 22:43:44 -05002e8d0ef89e00962727da754b8a541c319c998cd3Auxi parameter jacobian is now compiling.editsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D.heditsrc/pde/IBL/JacobianParam_ProjectToQauxv_Qinv.heditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi3D.hedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppeditsrc/pde/IBL/Integrand_ProjectToQauxv_FullPotential3D.heditsrc/pde/FullPotential/PDEFullPotential3D.hedittest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D_btest.cppsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D.htest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D_btest.cppsrc/pde/IBL/Integrand_ProjectToQauxv_FullPotential3D.hsrc/pde/IBL/IntegrandCell_ProjectToQauxv_FullPotential3D.h60618a492f58f38031bd737affbc6673c118ec421636517747000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduRename class and file 2021-11-09 23:15:47 -050060618a492f58f38031bd737affbc6673c118ec42Rename class and fileeditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D.hedittest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D_btest.cppdeletesrc/pde/IBL/Integrand_ProjectToQauxv_FullPotential3D.haddsrc/pde/IBL/IntegrandCell_ProjectToQauxv_FullPotential3D.htest/unit/Field/Project_DG_to_CG_btest.cppsrc/Field/ProjectSoln/Project_DG_to_CG.htest/unit/Field/CMakeLists.txt08f79ae52080537d645a55a3c9dc4f04dbec5edc1636551371000https://acdl.mit.edu/csi/user/blscblscblsc@mit.eduAdded functionality to project from a DG to a CG field defined on the same x-field. 2021-11-10 08:36:11 -050008f79ae52080537d645a55a3c9dc4f04dbec5edcAdded functionality to project from a DG to a CG field defined on the same x-field.addsrc/Field/ProjectSoln/Project_DG_to_CG.haddtest/unit/Field/Project_DG_to_CG_btest.cppedittest/unit/Field/CMakeLists.txtsrc/pde/NS/PDERANSSA2D.hsrc/Meshing/EGADS/RotorSource/ThicknessNACA6.cpp1fb9d7367fd1e91ef76fcc9bd1cf1ed75aa7f8101636555058000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduRemove infinite x-dervative for thickenss. Fix warnings. 2021-11-10 09:37:38 -05001fb9d7367fd1e91ef76fcc9bd1cf1ed75aa7f810Remove infinite x-dervative for thickenss. Fix warnings.editsrc/Meshing/EGADS/RotorSource/ThicknessNACA6.cppeditsrc/pde/NS/PDERANSSA2D.hsrc/Field/ProjectSoln/Project_DG_to_CG/Project_DG_to_CG_1D.cppsrc/Field/ProjectSoln/Project_DG_to_CG/Project_DG_to_CG_4D.cppsrc/Field/ProjectSoln/Project_DG_to_CG/Project_DG_to_CG_3D.cppsrc/Field/CMakeLists.txtsrc/Field/ProjectSoln/Project_DG_to_CG.hsrc/Field/ProjectSoln/Project_DG_to_CG/Project_DG_to_CG_2D.cppsrc/Field/ProjectSoln/Project_DG_to_CG/Project_DG_to_CG_impl.hfb16d75e6c26e9f9507fbc506770c6e0f203574a1636564114000https://acdl.mit.edu/csi/user/blscblscblsc@mit.eduDG ot CG prjection now uses explicit instantiation. 2021-11-10 12:08:34 -0500fb16d75e6c26e9f9507fbc506770c6e0f203574aDG ot CG prjection now uses explicit instantiation.addsrc/Field/ProjectSoln/Project_DG_to_CG/Project_DG_to_CG_3D.cppaddsrc/Field/ProjectSoln/Project_DG_to_CG/Project_DG_to_CG_2D.cppaddsrc/Field/ProjectSoln/Project_DG_to_CG/Project_DG_to_CG_impl.heditsrc/Field/ProjectSoln/Project_DG_to_CG.haddsrc/Field/ProjectSoln/Project_DG_to_CG/Project_DG_to_CG_4D.cppaddsrc/Field/ProjectSoln/Project_DG_to_CG/Project_DG_to_CG_1D.cppeditsrc/Field/CMakeLists.txtsrc/pde/IBL/IntegrandCell_ProjectToQauxi3D.h31dc285144f70e32d949ad85c524fb4814b82fed1636574053000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduSimplify jacobian calculation of Auxi equation as it's simply mass matrix for Galerkin projection 2021-11-10 14:54:13 -050031dc285144f70e32d949ad85c524fb4814b82fedSimplify jacobian calculation of Auxi equation as it's simply mass matrix for Galerkin projectioneditsrc/pde/IBL/IntegrandCell_ProjectToQauxi3D.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D.hsrc/pde/IBL/Residual_ProjectToQauxv_FullPotential3D.hsrc/Discretization/IntegrateCellGroups.he5eda6bdc0fd6bdf9f5a4d499a1a47e8b84cf66f1636586238000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduAdd a specialized IntegrateCellGroups method for reuse in FP-IBL3 coupling implementation 2021-11-10 18:17:18 -0500e5eda6bdc0fd6bdf9f5a4d499a1a47e8b84cf66fAdd a specialized IntegrateCellGroups method for reuse in FP-IBL3 coupling implementationeditsrc/pde/IBL/Residual_ProjectToQauxv_FullPotential3D.heditsrc/Discretization/IntegrateCellGroups.heditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D.htest/unit/pde/NS/PDEEuler2D_btest.cpptest/system/CodeConsistency/PDEEulermitAVDiffusion2D_Consistency_btest.cppsrc/pde/ArtificialViscosity/AVSensor_AdvectiveFlux3D.htest/system/CodeConsistency/BCEulermitAVSensor2D_Consistency_btest.cppsrc/pde/ArtificialViscosity/AVSensor_Source3D.hsrc/pde/ArtificialViscosity/PDEmitAVSensor3D.htest/unit/pde/NS/Fluids2D_Sensor_btest.cpptest/system/CodeConsistency/PDEmitAVSensor3D_Consistency_btest.cppsrc/pde/NS/PDEEulermitAVDiffusion3D.htest/unit/pde/NS/PDEEulermitAVDiffusion2D_btest.cpptest/unit/pde/NS/PDEEulermitAVDiffusion3D_btest.cpptest/unit/pde/NS/PDERANSSA3D_btest.cpptest/unit/pde/NS/BCRANSSA3D_mitState_btest.cpptest/system/CodeConsistency/PDEmitAVSensor3D_Consistency_RANSSA_btest.cpptest/unit/pde/NS/Q2DEntropy_btest.cpptest/system/CodeConsistency/PDEmitAVSensor2D_Consistency_afield_btest.cppsrc/pde/ArtificialViscosity/AVSensor_AdvectiveFlux2D.htest/unit/pde/ArtificialViscosity/AVSensor_AdvectiveFlux2D_btest.cppsrc/pde/NS/PDEEuler3D.hsrc/pde/ArtificialViscosity/AVSensor_Source2D.htest/system/CodeConsistency/BCEulermitAVSensor2D_Consistency_RANSSA_afield_btest.cppsrc/pde/NS/BCRANSSA2D.hscripts/vera/exclusions.txttest/system/CodeConsistency/BCEulermitAVSensor2D_Consistency_afield_btest.cppsrc/pde/NS/BCEulermitAVSensor2D.htest/system/CodeConsistency/PDEmitAVSensor2D_Consistency_btest.cpptest/unit/pde/SourceOnly/PDESourceOnly2D_btest.cpptest/system/CodeConsistency/PDEmitAVSensor2D_Consistency_RANSSA_btest.cpptest/unit/Meshing/EGADS/ThicknessNACA6_btest.cppsrc/pde/NS/PDEEulermitAVDiffusion2D.hsrc/pde/ArtificialViscosity/PDEmitAVSensor2D.hsrc/pde/NS/BCEuler2D_mitState.htest/unit/pde/ArtificialViscosity/PDEmitAVSensor2D_btest.cppsrc/pde/NS/GasModel.htest/unit/pde/NS/PDEEuler3D_btest.cpptest/unit/pde/NS/BCEulermitAVSensor2D_btest.cpptest/unit/pde/NS/GasModel_btest.cppsrc/pde/NS/PDEEuler2D.htest/unit/pde/NS/PDEEulermitAVDiffusion3D_RANSSA_btest.cpptest/unit/pde/ArtificialViscosity/PDEmitAVSensor3D_btest.cppd28cdaad0552577f96da945154958503a9aeda771636728865000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduMore strict templates for AV. Add strongFluxViscous to AV. 2021-11-12 09:54:25 -0500d28cdaad0552577f96da945154958503a9aeda77More strict templates for AV. Add strongFluxViscous to AV.editsrc/pde/NS/BCRANSSA2D.heditsrc/pde/NS/GasModel.hedittest/unit/pde/NS/PDERANSSA3D_btest.cppedittest/system/CodeConsistency/PDEEulermitAVDiffusion2D_Consistency_btest.cppedittest/unit/pde/SourceOnly/PDESourceOnly2D_btest.cppeditsrc/pde/NS/BCEuler2D_mitState.hedittest/system/CodeConsistency/PDEmitAVSensor3D_Consistency_btest.cppeditscripts/vera/exclusions.txtedittest/unit/pde/NS/BCEulermitAVSensor2D_btest.cppeditsrc/pde/ArtificialViscosity/PDEmitAVSensor3D.hedittest/unit/pde/NS/GasModel_btest.cppeditsrc/pde/NS/PDEEuler3D.hedittest/unit/pde/NS/BCRANSSA3D_mitState_btest.cppedittest/unit/pde/NS/PDEEuler2D_btest.cppeditsrc/pde/NS/PDEEulermitAVDiffusion2D.heditsrc/pde/ArtificialViscosity/AVSensor_AdvectiveFlux2D.heditsrc/pde/NS/BCEulermitAVSensor2D.hedittest/system/CodeConsistency/PDEmitAVSensor2D_Consistency_RANSSA_btest.cppeditsrc/pde/ArtificialViscosity/AVSensor_AdvectiveFlux3D.heditsrc/pde/NS/PDEEulermitAVDiffusion3D.hedittest/unit/pde/ArtificialViscosity/AVSensor_AdvectiveFlux2D_btest.cppedittest/unit/pde/NS/Fluids2D_Sensor_btest.cppedittest/system/CodeConsistency/BCEulermitAVSensor2D_Consistency_RANSSA_afield_btest.cppedittest/system/CodeConsistency/PDEmitAVSensor2D_Consistency_afield_btest.cppedittest/system/CodeConsistency/BCEulermitAVSensor2D_Consistency_btest.cppedittest/system/CodeConsistency/BCEulermitAVSensor2D_Consistency_afield_btest.cppeditsrc/pde/NS/PDEEuler2D.hedittest/system/CodeConsistency/PDEmitAVSensor2D_Consistency_btest.cppedittest/unit/pde/ArtificialViscosity/PDEmitAVSensor3D_btest.cppeditsrc/pde/ArtificialViscosity/PDEmitAVSensor2D.hedittest/unit/pde/NS/Q2DEntropy_btest.cppedittest/unit/Meshing/EGADS/ThicknessNACA6_btest.cppedittest/unit/pde/NS/PDEEuler3D_btest.cppedittest/unit/pde/NS/PDEEulermitAVDiffusion2D_btest.cppeditsrc/pde/ArtificialViscosity/AVSensor_Source3D.hedittest/system/CodeConsistency/PDEmitAVSensor3D_Consistency_RANSSA_btest.cppeditsrc/pde/ArtificialViscosity/AVSensor_Source2D.hedittest/unit/pde/NS/PDEEulermitAVDiffusion3D_RANSSA_btest.cppedittest/unit/pde/NS/PDEEulermitAVDiffusion3D_btest.cppedittest/unit/pde/ArtificialViscosity/PDEmitAVSensor2D_btest.cpptest/unit/pde/OutputCell_SolutionErrorSquared_btest.cppsrc/pde/OutputCell_SolutionErrorSquared.h626fac921f7727996fe8b2806c2fd632dc8732871636743474000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.edumodified (solution error)^2 to use dot product; now allows general ArrayQ<T> solution and returns scalar T output; added unit tests 2021-11-12 10:57:54 -0800626fac921f7727996fe8b2806c2fd632dc873287modified (solution error)^2 to use dot product; now allows general ArrayQ<T> solutionaddtest/unit/pde/OutputCell_SolutionErrorSquared_btest.cppeditsrc/pde/OutputCell_SolutionErrorSquared.htest/sandbox/Adapt2D_DGBR2_Triangle_RANSSA_Joukowski_Subsonic_ArtificialViscosity_toy.cpptest/unit/pde/NS/PDEEuler2D_btest.cpptest/sandbox/Adapt2D_DGBR2_Triangle_RANSSA_NACA0012_ArtificialViscosity_toy.cpptest/sandbox/Adapt2D_DGBR2_Triangle_RANSSA_RAE2822_ArtificialViscosity_toy.cpptest/sandbox/Solve2D_DGBR2_Triangle_RANSSA_Joukowski_ArtificialViscosity_toy.cpptest/unit/pde/NS/PDEEulermitAVDiffusion2D_RANSSA_btest.cppsrc/pde/NS/PDEEulermitAVDiffusion2D.htest/unit/pde/NS/PDEEulermitAVDiffusion3D_btest.cppsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_ArtificialViscosity_RANSSA2D_PrimitiveSutherland.cpptest/sandbox/Adapt2D_DGBR2_Triangle_RANSSA_Joukowski_Transonic_ArtificialViscosity_toy.cppsrc/Discretization/CMakeLists.txttest/sandbox/Adapt2D_DGBR2_Triangle_RANSSA_Joukowski_ArtificialViscosity_toy.cppsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_ArtificialViscosity_RANSSA2D_PrimitiveConstVisc.cpped9a322f226804be6f6a54af354c6292840f8bf81636766739000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduWarning fixes 2021-11-12 20:25:39 -0500ed9a322f226804be6f6a54af354c6292840f8bf8Warning fixesedittest/sandbox/Solve2D_DGBR2_Triangle_RANSSA_Joukowski_ArtificialViscosity_toy.cppaddsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_ArtificialViscosity_RANSSA2D_PrimitiveConstVisc.cppedittest/sandbox/Adapt2D_DGBR2_Triangle_RANSSA_Joukowski_Transonic_ArtificialViscosity_toy.cppedittest/sandbox/Adapt2D_DGBR2_Triangle_RANSSA_Joukowski_Subsonic_ArtificialViscosity_toy.cppeditsrc/Discretization/CMakeLists.txtedittest/unit/pde/NS/PDEEuler2D_btest.cppedittest/sandbox/Adapt2D_DGBR2_Triangle_RANSSA_NACA0012_ArtificialViscosity_toy.cppedittest/unit/pde/NS/PDEEulermitAVDiffusion2D_RANSSA_btest.cppedittest/unit/pde/NS/PDEEulermitAVDiffusion3D_btest.cppedittest/sandbox/Adapt2D_DGBR2_Triangle_RANSSA_Joukowski_ArtificialViscosity_toy.cppedittest/sandbox/Adapt2D_DGBR2_Triangle_RANSSA_RAE2822_ArtificialViscosity_toy.cppaddsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_ArtificialViscosity_RANSSA2D_PrimitiveSutherland.cppeditsrc/pde/NS/PDEEulermitAVDiffusion2D.hsrc/Discretization/CMakeLists.txt3e2127fb8b40684f32df8e673d9010b9a82335e61636768569000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFix for older cmake versions 2021-11-12 20:56:09 -05003e2127fb8b40684f32df8e673d9010b9a82335e6Fix for older cmake versionseditsrc/Discretization/CMakeLists.txttest/unit/pde/NS/PDEEulermitAVDiffusion3D_btest.cppsrc/tools/smoothmath.htest/system/CodeConsistency/PDEmitAVSensor3D_Consistency_RANSSA_btest.cpptest/system/CodeConsistency/PDEmitAVSensor2D_Consistency_btest.cpptest/system/CodeConsistency/PDEmitAVSensor2D_Consistency_RANSSA_btest.cppsrc/pde/NS/PDEEulermitAVDiffusion3D.htest/unit/pde/NS/PDEEulermitAVDiffusion2D_btest.cppsrc/pde/NS/PDEEulermitAVDiffusion2D.htest/system/CodeConsistency/PDEmitAVSensor3D_Consistency_btest.cpptest/unit/pde/NS/PDEEulermitAVDiffusion1D_btest.cppsrc/pde/NS/PDEEulermitAVDiffusion1D.hbbf8fdb39e5561572a25436008883a1855e759831636771086000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduReplace max with smoothRamp_tanh2 for artificial viscosity 2021-11-12 21:38:06 -0500bbf8fdb39e5561572a25436008883a1855e75983Replace max with smoothRamp_tanh2 for artificial viscosityedittest/system/CodeConsistency/PDEmitAVSensor2D_Consistency_btest.cppedittest/unit/pde/NS/PDEEulermitAVDiffusion1D_btest.cppeditsrc/pde/NS/PDEEulermitAVDiffusion3D.hedittest/unit/pde/NS/PDEEulermitAVDiffusion2D_btest.cppedittest/system/CodeConsistency/PDEmitAVSensor3D_Consistency_RANSSA_btest.cppeditsrc/pde/NS/PDEEulermitAVDiffusion1D.heditsrc/tools/smoothmath.hedittest/unit/pde/NS/PDEEulermitAVDiffusion3D_btest.cppeditsrc/pde/NS/PDEEulermitAVDiffusion2D.hedittest/system/CodeConsistency/PDEmitAVSensor2D_Consistency_RANSSA_btest.cppedittest/system/CodeConsistency/PDEmitAVSensor3D_Consistency_btest.cpptest/unit/tools/smoothmath_btest.cpp36cac12e521ee12aceeaa9d4a653c6b6b8e68c1b1636772400000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduSome more tests 2021-11-12 22:00:00 -050036cac12e521ee12aceeaa9d4a653c6b6b8e68c1bSome more testsedittest/unit/tools/smoothmath_btest.cpptest/system/CodeConsistency/PDEmitAVSensor2D_Consistency_btest.cpptest/system/CodeConsistency/PDEmitAVSensor2D_Consistency_RANSSA_btest.cpptest/system/CodeConsistency/PDEmitAVSensor3D_Consistency_btest.cpptest/unit/pde/NS/PDEEulermitAVDiffusion2D_btest.cppsrc/pde/NS/PDEEulermitAVDiffusion2D.hsrc/pde/NS/PDEEulermitAVDiffusion3D.hsrc/pde/NS/PDEEulermitAVDiffusion1D.htest/unit/pde/NS/PDEEulermitAVDiffusion3D_btest.cppsrc/tools/smoothmath.hsrc/Meshing/EGADS/RotorSource/ThicknessNACA6.cpptest/unit/tools/smoothmath_btest.cpptest/system/CodeConsistency/PDEmitAVSensor3D_Consistency_RANSSA_btest.cppsrc/Field/NormalField/NormalField_Volume.cpptest/unit/pde/NS/PDEEulermitAVDiffusion1D_btest.cpp0de45c408f4a082f557342a2655f42e51ce948bf1636922836000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFix smoothRamp_tanh2. Fix ThicknessNACA6 to use fabs instead of abs. 2021-11-14 15:47:16 -05000de45c408f4a082f557342a2655f42e51ce948bfFix smoothRamp_tanh2. Fix ThicknessNACA6 to use fabs instead of abs.editsrc/Meshing/EGADS/RotorSource/ThicknessNACA6.cppedittest/unit/tools/smoothmath_btest.cppedittest/system/CodeConsistency/PDEmitAVSensor3D_Consistency_btest.cppedittest/system/CodeConsistency/PDEmitAVSensor3D_Consistency_RANSSA_btest.cppeditsrc/tools/smoothmath.hedittest/system/CodeConsistency/PDEmitAVSensor2D_Consistency_btest.cppedittest/unit/pde/NS/PDEEulermitAVDiffusion2D_btest.cppeditsrc/Field/NormalField/NormalField_Volume.cppedittest/unit/pde/NS/PDEEulermitAVDiffusion3D_btest.cppeditsrc/pde/NS/PDEEulermitAVDiffusion2D.heditsrc/pde/NS/PDEEulermitAVDiffusion3D.heditsrc/pde/NS/PDEEulermitAVDiffusion1D.hedittest/unit/pde/NS/PDEEulermitAVDiffusion1D_btest.cppedittest/system/CodeConsistency/PDEmitAVSensor2D_Consistency_RANSSA_btest.cppsrc/Discretization/CMakeLists.txt99a135410110cbc1f98dec96d74710c79cb661dc1636923240000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduSuppress compiler warning 2021-11-14 15:54:00 -050099a135410110cbc1f98dec96d74710c79cb661dcSuppress compiler warningeditsrc/Discretization/CMakeLists.txttest/unit/Field/NormalField_btest.cppsrc/Discretization/DG/IntegrandBoundaryTrace_Flux_mitState_DGBR2.ha81b491f1c6041c7b8d2bd4277d301643aeca3441636979906000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFix warning and relax tolerance 2021-11-15 07:38:26 -0500a81b491f1c6041c7b8d2bd4277d301643aeca344Fix warning and relax toleranceedittest/unit/Field/NormalField_btest.cppeditsrc/Discretization/DG/IntegrandBoundaryTrace_Flux_mitState_DGBR2.hsrc/UserInterfaces/BodyForceSolver_impl.h7ac92da5f25d239a3d4aa43fd0e2dacd51c0a7941637003787000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduEnable viscous body forces for Euler 2021-11-15 14:16:27 -05007ac92da5f25d239a3d4aa43fd0e2dacd51c0a794Enable viscous body forces for Eulereditsrc/UserInterfaces/BodyForceSolver_impl.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D.hsrc/pde/IBL/JacobianParam_ProjectToQauxv_FullPotential3D.hsrc/pde/IBL/IntegrandCell_ProjectToQauxv_FullPotential3D.h841b3e518a056c09f7770b82fb4bdbc427bbb8851637016516000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduCompleted Auxv_Qinv jacobian 2021-11-15 17:48:36 -0500841b3e518a056c09f7770b82fb4bdbc427bbb885Completed Auxv_Qinv jacobianeditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D.heditsrc/pde/IBL/IntegrandCell_ProjectToQauxv_FullPotential3D.haddsrc/pde/IBL/JacobianParam_ProjectToQauxv_FullPotential3D.htest/system/CodeConsistency/VMSDBR2_BubbleModes_btest.cpp33e85c9596d48a0882f2ab30e7157ba0d0a5b8191637083635000https://acdl.mit.edu/csi/user/blscblscblsc@mit.eduAdded a test to check that bubble modes were not present in VMSD after static condenstaion for a partial Newton step. 2021-11-16 12:27:15 -050033e85c9596d48a0882f2ab30e7157ba0d0a5b819Added a test to check that bubble modes were not present in VMSD after static condenstaion for a partial Newton step.addtest/system/CodeConsistency/VMSDBR2_BubbleModes_btest.cppscripts/vera/exclusions.txt4848ee6b3255a3947129b91592d2ae57ed8768031637087331000https://acdl.mit.edu/csi/user/blscblscblsc@mit.eduVera exclusion needed for new unit test (L006). 2021-11-16 13:28:51 -05004848ee6b3255a3947129b91592d2ae57ed876803Vera exclusion needed for new unit test (L006).editscripts/vera/exclusions.txttest/unit/SolutionTrek/Continuation/Homotopy_btest.cppsrc/NonLinearSolver/NonLinearSolverBase.hsrc/SolutionTrek/Continuation/Homotopy/AlgebraicEquationSet_HTC.htest/unit/SolutionTrek/Continuation/CMakeLists.txtsrc/Discretization/VMSDBR2/AlgebraicEquationSet_VMSD_BR2.hsrc/NonLinearSolver/NewtonSolver_impl.hsrc/NonLinearSolver/LineUpdate/HalvingSearchLineUpdate_impl.htest/system/LocalSolve/Constrained_Solve_btest.cppsrc/SolutionTrek/Continuation/Homotopy/Homotopy.h4be505d0bdcb09a466d542fb3db79b28e56678511637087486000https://acdl.mit.edu/csi/user/blscblscblsc@mit.eduAdded parallel test for homotopy, found bug in parallel, fixed bug in parallel. 2021-11-16 13:31:26 -05004be505d0bdcb09a466d542fb3db79b28e5667851Added parallel test for homotopy, found bug in parallel, fixed bug in parallel.editsrc/NonLinearSolver/NewtonSolver_impl.heditsrc/NonLinearSolver/LineUpdate/HalvingSearchLineUpdate_impl.hedittest/unit/SolutionTrek/Continuation/Homotopy_btest.cppedittest/system/LocalSolve/Constrained_Solve_btest.cppeditsrc/NonLinearSolver/NonLinearSolverBase.hedittest/unit/SolutionTrek/Continuation/CMakeLists.txteditsrc/SolutionTrek/Continuation/Homotopy/Homotopy.heditsrc/Discretization/VMSDBR2/AlgebraicEquationSet_VMSD_BR2.heditsrc/SolutionTrek/Continuation/Homotopy/AlgebraicEquationSet_HTC.hsrc/Meshing/EGADS/RotorSource/ThicknessNACA6.cpptest/unit/Meshing/EGADS/ThicknessNACA6_btest.cppsrc/Meshing/EGADS/RotorSource/ThicknessBlade.cppsrc/Field/NormalField/NormalField_Volume.cpp54b441da5ebbdc93af49567b209231caea05b74f1637093249000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduDiscrete blockage gradient 2021-11-16 15:07:29 -050054b441da5ebbdc93af49567b209231caea05b74fDiscrete blockage gradienteditsrc/Field/NormalField/NormalField_Volume.cppeditsrc/Meshing/EGADS/RotorSource/ThicknessNACA6.cppedittest/unit/Meshing/EGADS/ThicknessNACA6_btest.cppeditsrc/Meshing/EGADS/RotorSource/ThicknessBlade.cppsrc/LinearAlgebra/DenseLinAlg/DynamicSize/MatMul/MatMul_Native_Real.cpp1f1703beaf136a134e1f69d28a58e47a2ce23b171637094218000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduForgot a file 2021-11-16 15:23:38 -05001f1703beaf136a134e1f69d28a58e47a2ce23b17Forgot a fileeditsrc/LinearAlgebra/DenseLinAlg/DynamicSize/MatMul/MatMul_Native_Real.cppsrc/Adaptation/MOESS/ParamFieldBuilder.hsrc/pde/ArtificialViscosity/PDEmitAVSensor3D.htest/sandbox/Adapt3D_VMSDBR2_RANSSA_DPW_AV_HTC_toy.cppsrc/pde/NS/PDEEulermitAVDiffusion3D.hsrc/pde/NS/PDERANSSA3D.hsrc/pde/ArtificialViscosity/AVSensor_Source3D.hc76401eefe98a23b4bad38f16e07060dc8191bd81637113883000https://acdl.mit.edu/csi/user/blscblscblsc@mit.eduAdded an example homotopy adapt in 3D with RANS, and some missing function calls. 2021-11-16 20:51:23 -0500c76401eefe98a23b4bad38f16e07060dc8191bd8Added an example homotopy adapt in 3D with RANS, and some missing function calls.editsrc/pde/ArtificialViscosity/AVSensor_Source3D.heditsrc/pde/NS/PDEEulermitAVDiffusion3D.haddtest/sandbox/Adapt3D_VMSDBR2_RANSSA_DPW_AV_HTC_toy.cppeditsrc/pde/NS/PDERANSSA3D.heditsrc/Adaptation/MOESS/ParamFieldBuilder.heditsrc/pde/ArtificialViscosity/PDEmitAVSensor3D.htest/sandbox/Adapt3D_VMSDBR2_RANSSA_DPW_AV_HTC_toy.cpp4315b2dafb7b19ce14e08dea5099f2745d96c1d71637123093000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduVera fix 2021-11-16 23:24:53 -05004315b2dafb7b19ce14e08dea5099f2745d96c1d7Vera fixedittest/sandbox/Adapt3D_VMSDBR2_RANSSA_DPW_AV_HTC_toy.cppsrc/pde/ArtificialViscosity/PDEmitAVSensor3D.htest/system/CodeConsistency/VMSDBR2_BubbleModes_btest.cpp27bfb9e6396ae66e0b49fee12ea0d5199fa4e0451637163540000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFix compile error 2021-11-17 10:39:00 -050027bfb9e6396ae66e0b49fee12ea0d5199fa4e045Fix compile erroreditsrc/pde/ArtificialViscosity/PDEmitAVSensor3D.hedittest/system/CodeConsistency/VMSDBR2_BubbleModes_btest.cppsrc/pde/ArtificialViscosity/AVSensor_Source2D.htest/sandbox/Adapt3D_VMSDBR2_RANSSA_DPW_AV_HTC_toy.cpptest/sandbox/Solve2D_VMSDBR2_RANSSA_Joukowski_HTC_toy.cppsrc/pde/NS/PDERANSSA2D.hsrc/pde/ArtificialViscosity/AVSensor_Source3D.htest/sandbox/Solve2D_VMSDBR2_NavierStokes_Joukowski_AV_HTC_toy.cppsrc/pde/ArtificialViscosity/PDEmitAVSensor2D.hd18205a2d8329c4e47c73eee412ec7fd8d8e2ce51637164813000https://acdl.mit.edu/csi/user/blscblscblsc@mit.eduAdded HiFW Joukowski case using homotopy (still WIP). Updates to artificial viscosity interface to resolve some template mis-matches during Joukowski case set up. 2021-11-17 11:00:13 -0500d18205a2d8329c4e47c73eee412ec7fd8d8e2ce5Added HiFW Joukowski case using homotopy (still WIP). Updates to artificial viscosity interface to resolve some template mis-matches during Joukowski case set up.editsrc/pde/NS/PDERANSSA2D.hedittest/sandbox/Adapt3D_VMSDBR2_RANSSA_DPW_AV_HTC_toy.cppdeletetest/sandbox/Solve2D_VMSDBR2_NavierStokes_Joukowski_AV_HTC_toy.cppeditsrc/pde/ArtificialViscosity/AVSensor_Source3D.heditsrc/pde/ArtificialViscosity/PDEmitAVSensor2D.haddtest/sandbox/Solve2D_VMSDBR2_RANSSA_Joukowski_HTC_toy.cppeditsrc/pde/ArtificialViscosity/AVSensor_Source2D.hsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_BCDataField.h27a88351a93e1ea2fc950d76f1c3d2e8d21663fe1637165783000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduAdd annotations 2021-11-17 11:16:23 -050027a88351a93e1ea2fc950d76f1c3d2e8d21663feAdd annotationseditsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_BCDataField.hsrc/pde/NS/PDERANSSA3D.h2eb4f4ee25dc738e6bb45693041eb0007f0b13ce1637167512000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduAnother compile fix 2021-11-17 11:45:12 -05002eb4f4ee25dc738e6bb45693041eb0007f0b13ceAnother compile fixeditsrc/pde/NS/PDERANSSA3D.htest/sandbox/Adapt3D_VMSDBR2_RANSSA_DPW_AV_HTC_toy.cpp38b1b3607fa2f3c9e2a9843b571572e48c2cb25c1637176215000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduAnother compile fix 2021-11-17 14:10:15 -050038b1b3607fa2f3c9e2a9843b571572e48c2cb25cAnother compile fixedittest/sandbox/Adapt3D_VMSDBR2_RANSSA_DPW_AV_HTC_toy.cpptest/sandbox/Adapt3D_VMSDBR2_RANSSA_DPW_AV_HTC_toy.cpp9bbf6deba06512152c48cd865073fbbc64eb17961637176657000https://acdl.mit.edu/csi/user/blscblscblsc@mit.eduFixed error in PETSc Dicts. 2021-11-17 14:17:37 -05009bbf6deba06512152c48cd865073fbbc64eb1796Fixed error in PETSc Dicts.edittest/sandbox/Adapt3D_VMSDBR2_RANSSA_DPW_AV_HTC_toy.cpptest/unit/Field/Project_DG_to_CG_btest.cpptest/unit/Field/CMakeLists.txttest/sandbox/Adapt3D_VMSDBR2_RANSSA_DPW_AV_HTC_toy.cppb07d2d1cb5ab28563af83025eb3f83b1811e77d91637185300000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduRelax tolerance. Add PETScInit. Suppress warning. 2021-11-17 16:41:40 -0500b07d2d1cb5ab28563af83025eb3f83b1811e77d9Relax tolerance. Add PETScInit. Suppress warning.edittest/unit/Field/CMakeLists.txtedittest/sandbox/Adapt3D_VMSDBR2_RANSSA_DPW_AV_HTC_toy.cppedittest/unit/Field/Project_DG_to_CG_btest.cpptest/sandbox/Adapt3D_VMSDBR2_RANSSA_DPW_AV_HTC_toy.cppea0743bab9cd8d1a1cbbcbe814cd256c41813cea1637201889000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduMore warning fixes 2021-11-17 21:18:09 -0500ea0743bab9cd8d1a1cbbcbe814cd256c41813ceaMore warning fixesedittest/sandbox/Adapt3D_VMSDBR2_RANSSA_DPW_AV_HTC_toy.cppsrc/pde/NS/BCEulermitAVSensor3D.hscripts/jenkins/SANS_Commit.shsrc/pde/NS/PDERANSSA3D.hbf780d31d16fdb906dbe76e15f6d9c18b08bd9571637290048000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduPDERANS3D fixes 2021-11-18 21:47:28 -0500bf780d31d16fdb906dbe76e15f6d9c18b08bd957PDERANS3D fixeseditscripts/jenkins/SANS_Commit.sheditsrc/pde/NS/PDERANSSA3D.heditsrc/pde/NS/BCEulermitAVSensor3D.hsrc/pde/ArtificialViscosity/AVSensor_Source2D.hsrc/pde/NS/isPDERANSSA.hsrc/pde/NS/PDEEulermitAVDiffusion3D.hsrc/pde/NS/PDEEulermitAVDiffusion2D.hsrc/pde/ArtificialViscosity/AVSensor_Source3D.h7bcca248a9e7c0339bde0903edb1299fdd74ecb31637294069000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFixes for AVSensor_Source_VMSD_SPD 2021-11-18 22:54:29 -05007bcca248a9e7c0339bde0903edb1299fdd74ecb3Fixes for AVSensor_Source_VMSD_SPDeditsrc/pde/ArtificialViscosity/AVSensor_Source3D.haddsrc/pde/NS/isPDERANSSA.heditsrc/pde/NS/PDEEulermitAVDiffusion3D.heditsrc/pde/ArtificialViscosity/AVSensor_Source2D.heditsrc/pde/NS/PDEEulermitAVDiffusion2D.htest/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cppb4c33cfd553e051e72bd5270bbc1ceff4fc406ec1637300574000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFix ping test 2021-11-19 00:42:54 -0500b4c33cfd553e051e72bd5270bbc1ceff4fc406ecFix ping testedittest/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cppscripts/SANS_developer.she3e146324c40b636ceeeeae8252ede545e58bd011637372616000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduChange git update alias 2021-11-19 20:43:36 -0500e3e146324c40b636ceeeeae8252ede545e58bd01Change git update aliaseditscripts/SANS_developer.shsrc/Meshing/EGADS/RotorSource/ThicknessBlade.cpp324ef9a0ceec244cf74d6867b5e8cfcacad2ed9f1637383927000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFix sensitvity calculation 2021-11-19 23:52:07 -0500324ef9a0ceec244cf74d6867b5e8cfcacad2ed9fFix sensitvity calculationeditsrc/Meshing/EGADS/RotorSource/ThicknessBlade.cppsrc/Meshing/EGADS/RotorSource/ThicknessBlade.cppsrc/Meshing/EGADS/RotorSource/CamberBlade.cpp43eb0b8d30b49b2316a640beca3231d874d831e11637418632000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduDon't require name for camber free parameters 2021-11-20 09:30:32 -050043eb0b8d30b49b2316a640beca3231d874d831e1Don't require name for camber free parameterseditsrc/Meshing/EGADS/RotorSource/CamberBlade.cppeditsrc/Meshing/EGADS/RotorSource/ThicknessBlade.cppsrc/Discretization/VMSDBR2/IntegrandBoundaryTrace_None_VMSD_BR2.hsrc/Discretization/Galerkin/IntegrandBoundaryTrace_None_Galerkin.h1a12a906ba7c9668c59f392d1c3e4f464057da101637427389000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduImplement BCNone for VMSD BR2. I hope nobody has been using it... 2021-11-20 11:56:29 -05001a12a906ba7c9668c59f392d1c3e4f464057da10Implement BCNone for VMSD BR2. I hope nobody has been using it...editsrc/Discretization/VMSDBR2/IntegrandBoundaryTrace_None_VMSD_BR2.heditsrc/Discretization/Galerkin/IntegrandBoundaryTrace_None_Galerkin.hsrc/Discretization/Galerkin/JacobianBoundaryTrace_Galerkin_BCDataField.hsrc/Discretization/Galerkin/JacobianBoundaryTrace_Galerkin_DerivativeWithBCDataFieldQauxi.hsrc/Discretization/Galerkin/ResidualBoundaryTrace_Galerkin_BCDataField.hsrc/pde/IBL/JacobianParam_ProjectToQauxv_Qinv.hsrc/Discretization/Galerkin/JacobianBoundaryTrace_Dispatch_Galerkin.hsrc/pde/IBL/JacobianParam_FullPotential_Qauxi.hsrc/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.hsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_BCDataField.h6beadf61de6812cb8e93cd0876d9ac7d379026cf1637645944000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduCompleted d(FP)/d(Qauxi) coupling jacobian for FP-IBL 2021-11-23 00:39:04 -05006beadf61de6812cb8e93cd0876d9ac7d379026cfCompleted d(FP)/d(Qauxi) coupling jacobian for FP-IBLaddsrc/Discretization/Galerkin/JacobianBoundaryTrace_Galerkin_DerivativeWithBCDataFieldQauxi.heditsrc/Discretization/Galerkin/JacobianBoundaryTrace_Dispatch_Galerkin.heditsrc/Discretization/Galerkin/ResidualBoundaryTrace_Galerkin_BCDataField.heditsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_BCDataField.heditsrc/Discretization/Galerkin/JacobianBoundaryTrace_Galerkin_BCDataField.haddsrc/pde/IBL/JacobianParam_FullPotential_Qauxi.heditsrc/pde/IBL/JacobianParam_ProjectToQauxv_Qinv.heditsrc/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.htest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppb02bacdf7a04f4521655bc482ce72d2948d3be241637646144000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduForgot to commit unit test on d(FP)/d(Qauxi) jacobian 2021-11-23 00:42:24 -0500b02bacdf7a04f4521655bc482ce72d2948d3be24Forgot to commit unit test on d(FP)/d(Qauxi) jacobianedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppsrc/pde/IBL/ResidualManifoldBoundaryTrace_ProjectToQauxi_FullPotential3D.hsrc/pde/IBL/IntegrandManifoldBoundaryTrace_ProjectToQauxi.hsrc/pde/IBL/IntegrandManifoldInteriorTrace_ProjectToQauxi.htest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D_btest.cppsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv3D.hsrc/pde/IBL/ResidualVolumeBoundaryTrace_ProjectToQauxi_FullPotential3D.hsrc/pde/IBL/IntegrandVolumeBoundaryTrace_ProjectToQauxi.h42e7f188be2e7f8f7431eb528df94bb444f89c691637649153000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduRemoved redundant files for discarded Auxi and Auxv equation implementation 2021-11-23 01:32:33 -050042e7f188be2e7f8f7431eb528df94bb444f89c69Removed redundant files for discarded Auxi and Auxv equation implementationdeletesrc/pde/IBL/ResidualManifoldBoundaryTrace_ProjectToQauxi_FullPotential3D.hdeletesrc/pde/IBL/ResidualVolumeBoundaryTrace_ProjectToQauxi_FullPotential3D.hdeletesrc/pde/IBL/IntegrandManifoldBoundaryTrace_ProjectToQauxi.hdeletesrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv3D.hdeletesrc/pde/IBL/IntegrandManifoldInteriorTrace_ProjectToQauxi.hdeletesrc/pde/IBL/IntegrandVolumeBoundaryTrace_ProjectToQauxi.hdeletetest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D_btest.cppsrc/Discretization/IntegrateBoundaryTraceGroups_ProjectToQauxi_FullPotential3D.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D.hb9564e1c6f75336940b5eb3cca993ab3a3c457421637650257000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduRemoved more discarded implementation for Auxi (in FP-IBL3) 2021-11-23 01:50:57 -0500b9564e1c6f75336940b5eb3cca993ab3a3c45742Removed more discarded implementation for Auxi (in FP-IBL3)deletesrc/Discretization/IntegrateBoundaryTraceGroups_ProjectToQauxi_FullPotential3D.hdeletesrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi_FullPotential3D.htest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppsrc/LinearAlgebra/SparseLinAlg/Direct/UMFPACK/UMFPACKSolver_MatrixBlock_4x4_Instantiate.cppsrc/LinearAlgebra/DenseLinAlg/StaticSize/MatMul/MatrixS_MatMul_Native_Real_Instantiate.cpp9ec3325e74b3fd585bf52b0b4b780703d3b478a11637651452000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduAdd linear algebra instantiations for FP-IBL3 2021-11-23 02:10:52 -05009ec3325e74b3fd585bf52b0b4b780703d3b478a1Add linear algebra instantiations for FP-IBL3editsrc/LinearAlgebra/DenseLinAlg/StaticSize/MatMul/MatrixS_MatMul_Native_Real_Instantiate.cppeditsrc/LinearAlgebra/SparseLinAlg/Direct/UMFPACK/UMFPACKSolver_MatrixBlock_4x4_Instantiate.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppsrc/Adaptation/MOESS/SolverInterface_DGBR2_Block2x2.h3ace4f186ff37eacfb9a2cb63448c3c03128e5591637652448000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduRefactoring to keep up with JacobianParam's updated template arguments 2021-11-23 02:27:28 -05003ace4f186ff37eacfb9a2cb63448c3c03128e559Refactoring to keep up with JacobianParam's updated template argumentseditsrc/Adaptation/MOESS/SolverInterface_DGBR2_Block2x2.hsrc/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.hsrc/pde/IBL/JacobianParam_FullPotential_Qauxi.hsrc/Discretization/Galerkin/JacobianBoundaryTrace_Galerkin_DerivativeWithBCDataFieldQauxi.hd18827ab889425b8561cc0f2e113ef775af747c71637690663000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduFixed formatting 2021-11-23 13:04:23 -0500d18827ab889425b8561cc0f2e113ef775af747c7Fixed formattingeditsrc/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.heditsrc/pde/IBL/JacobianParam_FullPotential_Qauxi.heditsrc/Discretization/Galerkin/JacobianBoundaryTrace_Galerkin_DerivativeWithBCDataFieldQauxi.hsrc/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.hsrc/Discretization/Galerkin/JacobianBoundaryTrace_Galerkin_DerivativeWithBCDataFieldQauxi.h283a2b633e4d42a458c5b813bd8f3b7f0d90046c1637705023000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduMinor refactoring 2021-11-23 17:03:43 -0500283a2b633e4d42a458c5b813bd8f3b7f0d90046cMinor refactoringeditsrc/Discretization/Galerkin/JacobianBoundaryTrace_Galerkin_DerivativeWithBCDataFieldQauxi.heditsrc/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.htest/unit/UnitGrids/XField3D_BoxBoundary_Quad_X1_btest.cppsrc/pde/IBL/Residual_ProjectToQauxv_FullPotential3D.h29c3cc005d1be774a581ed853df0502313dd70c81637775061000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduAdd unit test for box grid and its derived boundary manifold grid 2021-11-24 12:31:01 -050029c3cc005d1be774a581ed853df0502313dd70c8Add unit test for box grid and its derived boundary manifold gridaddtest/unit/UnitGrids/XField3D_BoxBoundary_Quad_X1_btest.cppeditsrc/pde/IBL/Residual_ProjectToQauxv_FullPotential3D.htest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D_btest.cpp317e79b14015e3933d25e724f454a21b539557e31637775131000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduMinor cleanup 2021-11-24 12:32:11 -0500317e79b14015e3933d25e724f454a21b539557e3Minor cleanupedittest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D_btest.cpptest/unit/UnitGrids/XField3D_BoxBoundary_Quad_X1_btest.cppd365606df825ca4ba56c61b5e2a2d6f136adb3fa1637775849000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduAdd more unit test 2021-11-24 12:44:09 -0500d365606df825ca4ba56c61b5e2a2d6f136adb3faAdd more unit testedittest/unit/UnitGrids/XField3D_BoxBoundary_Quad_X1_btest.cppsrc/Field/FieldVolume_DG_BoundaryTrace_matchAreaCell.htest/unit/Field/Field_DG_BoundaryTrace_matchAreaCell_btest.cppb7098bdc279c9b3fa28e1d6b6d2719a7f59a5c951637792905000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduAdd unit test for FieldVolume_DG_BoundaryTrace_matchAreaCell 2021-11-24 17:28:25 -0500b7098bdc279c9b3fa28e1d6b6d2719a7f59a5c95Add unit test for FieldVolume_DG_BoundaryTrace_matchAreaCelleditsrc/Field/FieldVolume_DG_BoundaryTrace_matchAreaCell.haddtest/unit/Field/Field_DG_BoundaryTrace_matchAreaCell_btest.cppsrc/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.hsrc/Discretization/Galerkin/JacobianBoundaryTrace_Galerkin_DerivativeWithBCDataFieldQauxi.h6101184156f51f82dbaa90c3c24164237a2bec9c1638412402000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduBug fix: previously, allocated memory for dynamic matrix but didn't initialize to zero 2021-12-01 21:33:22 -05006101184156f51f82dbaa90c3c24164237a2bec9cBug fix: previously, allocated memory for dynamic matrix but didn't initialize to zeroeditsrc/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.heditsrc/Discretization/Galerkin/JacobianBoundaryTrace_Galerkin_DerivativeWithBCDataFieldQauxi.htest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppb9a582131d3fb0b65b0f75aaaadb9d3b60a87d3b1638415312000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduCompleted 4x4 block system jacobian ping test for FP-IBL3 coupling 2021-12-01 22:21:52 -0500b9a582131d3fb0b65b0f75aaaadb9d3b60a87d3bCompleted 4x4 block system jacobian ping test for FP-IBL3 couplingedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppsrc/pde/NS/OutputEuler3D.hsrc/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.hd1cdb33c87af0418f462c00a4602ef0c925bb21a1638849053000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduAdded Tt output for Rotor 2021-12-06 22:50:53 -0500d1cdb33c87af0418f462c00a4602ef0c925bb21aAdded Tt output for Rotoreditsrc/pde/NS/OutputEuler3D.heditsrc/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.hsrc/NonLinearSolver/LineUpdate/HalvingSearchLineUpdate_MatrixBlock_4x4_Instantiate.cppsrc/LinearAlgebra/SparseLinAlg/ScalarMatrix_CRS_int.cppsrc/NonLinearSolver/NewtonSolver_MatrixBlock_4x4_Instantiate.cppsrc/LinearAlgebra/SparseLinAlg/Krylov/FGMRES_MatrixBlock_4x4_Instantiate.cppc4642c7bb668a950d0300282d567cd6dc5b271ef1638940286000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduadded instantiations for Newton solution of FP-IBL3 equations 2021-12-08 00:11:26 -0500c4642c7bb668a950d0300282d567cd6dc5b271efadded instantiations for Newton solution of FP-IBL3 equationseditsrc/LinearAlgebra/SparseLinAlg/ScalarMatrix_CRS_int.cppeditsrc/NonLinearSolver/NewtonSolver_MatrixBlock_4x4_Instantiate.cppeditsrc/NonLinearSolver/LineUpdate/HalvingSearchLineUpdate_MatrixBlock_4x4_Instantiate.cppeditsrc/LinearAlgebra/SparseLinAlg/Krylov/FGMRES_MatrixBlock_4x4_Instantiate.cpptest/sandbox/Solve3D_CG_FP_duct_toy.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cpptest/sandbox/Solve3D_CG_FP_CoupledIBL3_duct_toy.cpptest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cpp6dfc9a97c1ab3b4f05442c2e5c0d8f69814c91431638940342000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduSolved first FP-IBL3 case with Newton solver 2021-12-08 00:12:22 -05006dfc9a97c1ab3b4f05442c2e5c0d8f69814c9143Solved first FP-IBL3 case with Newton solverdeletetest/sandbox/Solve3D_CG_FP_CoupledIBL3_duct_toy.cppedittest/sandbox/Solve3D_CG_FP_duct_toy.cppaddtest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppsrc/LinearAlgebra/SparseLinAlg/Direct/MKL_PARDISO/MKL_PARDISOSolver_MatrixBlock_4x4_Instantiate.cppsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_MatrixBlock_4x4_Instantiate.cpptest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cppsrc/LinearAlgebra/SparseLinAlg/Direct/MKL_PARDISO/MKL_PARDISOSolver.h30d5efebead8d6b4127c872a9df09a7bb0db13e61638980623000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduadded instantiations for MKL and PETSc for FP-IBL3 2021-12-08 11:23:43 -050030d5efebead8d6b4127c872a9df09a7bb0db13e6added instantiations for MKL and PETSc for FP-IBL3editsrc/LinearAlgebra/SparseLinAlg/Direct/MKL_PARDISO/MKL_PARDISOSolver_MatrixBlock_4x4_Instantiate.cppedittest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cppeditsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_MatrixBlock_4x4_Instantiate.cppeditsrc/LinearAlgebra/SparseLinAlg/Direct/MKL_PARDISO/MKL_PARDISOSolver.hsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_MatrixBlock_3x3_Instantiate.cppsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_MatrixBlock_4x4_Instantiate.cppsrc/Discretization/Block/AlgebraicEquationSet_Block4x4_impl.hsrc/Discretization/Block/AlgebraicEquationSet_Block4x4.htest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cppe06ed4989c8971ff977713b33c19bde87e03d7de1638986402000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduadded implementation for PETSc for FP-IBL3 2021-12-08 13:00:02 -0500e06ed4989c8971ff977713b33c19bde87e03d7deadded implementation for PETSc for FP-IBL3editsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_MatrixBlock_3x3_Instantiate.cppedittest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cppeditsrc/Discretization/Block/AlgebraicEquationSet_Block4x4_impl.heditsrc/Discretization/Block/AlgebraicEquationSet_Block4x4.heditsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_MatrixBlock_4x4_Instantiate.cppsrc/pde/IBL/ElementProjectionOutputIBL3D.htest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cpp37d6d37a66572fc8f51c480d86d0dc77473fb6aa1639001778000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edumodularized S-shaped duct grid points generation 2021-12-08 17:16:18 -050037d6d37a66572fc8f51c480d86d0dc77473fb6aamodularized S-shaped duct grid points generationeditsrc/pde/IBL/ElementProjectionOutputIBL3D.hedittest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cpptest/sandbox/Solve3D_CG_FP_duct_toy.cpptest/unit/UnitGrids/XField3D_Box_Hex_X1.cppsrc/NonLinearSolver/LineUpdate/HalvingSearchLineUpdate_impl.hsrc/Discretization/Block/AlgebraicEquationSet_Block4x4_impl.htest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cpptest/unit/UnitGrids/XField3D_Box_Hex_X1.hda4251b2c616ef8800f0ed35ee6c59c11e42bb1b1639080742000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edudebugging (for sporadically slow FP residual/jacobian) and refactoring FP-IBL3 test case 2021-12-09 15:12:22 -0500da4251b2c616ef8800f0ed35ee6c59c11e42bb1bdebugging (for sporadically slow FP residual/jacobian) and refactoring FP-IBL3 test caseedittest/sandbox/Solve3D_CG_FP_duct_toy.cppedittest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cppedittest/unit/UnitGrids/XField3D_Box_Hex_X1.cppeditsrc/NonLinearSolver/LineUpdate/HalvingSearchLineUpdate_impl.heditsrc/Discretization/Block/AlgebraicEquationSet_Block4x4_impl.hedittest/unit/UnitGrids/XField3D_Box_Hex_X1.htest/unit/pde/OutputCell_SolutionErrorSquared_btest.cppc32c025c0a428b774bb664464b04b00ebd3df6f71639085230000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.edumod: VectorFunction -> ArrayFunction 2021-12-09 13:27:10 -0800c32c025c0a428b774bb664464b04b00ebd3df6f7mod: VectorFunction -> ArrayFunctionedittest/unit/pde/OutputCell_SolutionErrorSquared_btest.cpptest/sandbox/Adapt2D_DGAdvective_Euler_Joukowski_Pointwise_toy.cppb03b3f78fd7bcbf3166909ccf4ac9bacedad45651639098401000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.eduinviscid Joukowski with interface to Pointwise 2021-12-09 17:06:41 -0800b03b3f78fd7bcbf3166909ccf4ac9bacedad4565inviscid Joukowski with interface to Pointwiseaddtest/sandbox/Adapt2D_DGAdvective_Euler_Joukowski_Pointwise_toy.cppsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_BCDataField.htest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cpp66571dad432347a6d4eb507d7d8a7625ddd0cc281639106201000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduAdded more profiling info for debugging FP-IBL3 2021-12-09 22:16:41 -050066571dad432347a6d4eb507d7d8a7625ddd0cc28Added more profiling info for debugging FP-IBL3editsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_BCDataField.hedittest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cppsrc/NonLinearSolver/NewtonSolver_impl.hd88f7dd10f130ffc7225c0243d65f6c0cf866ef11639106863000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduadded verbose printout for debugging 2021-12-09 22:27:43 -0500d88f7dd10f130ffc7225c0243d65f6c0cf866ef1added verbose printout for debuggingeditsrc/NonLinearSolver/NewtonSolver_impl.htest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cpptest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cpp9e69a488d8ded4404dbab8509f1d88ed893c5de91639108965000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edufixed formatting errors 2021-12-09 23:02:45 -05009e69a488d8ded4404dbab8509f1d88ed893c5de9fixed formatting errorsedittest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cppedittest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cppsrc/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.h56be400f2953852c2ddfc7aa61321330fbe77a461639111261000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFix Tt rotor output 2021-12-09 23:41:01 -050056be400f2953852c2ddfc7aa61321330fbe77a46Fix Tt rotor outputeditsrc/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.hsrc/Discretization/Potential_Adjoint/IntegrandBoundaryTrace_WakeCut_CG_FP_Virtual.h0969ac72461269fd34e77058f23dbc14dbd7e6f81639114400000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.edufixed lines that were too long 2021-12-09 21:33:20 -08000969ac72461269fd34e77058f23dbc14dbd7e6f8fixed lines that were too longeditsrc/Discretization/Potential_Adjoint/IntegrandBoundaryTrace_WakeCut_CG_FP_Virtual.hsrc/pde/AdvectionDiffusion/PDEAdvectionDiffusion2D.hc98e2dfb82edcd76cb7a7f6b15ecb1cf16b8be291639114602000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.edufixed promote_Surreal bug (only showed up for USE_GRID_LAPLACIAN) 2021-12-09 21:36:42 -0800c98e2dfb82edcd76cb7a7f6b15ecb1cf16b8be29fixed promote_Surreal bug (only showed up for USE_GRID_LAPLACIAN)editsrc/pde/AdvectionDiffusion/PDEAdvectionDiffusion2D.htest/unit/pde/OutputCell_SolutionErrorSquared_btest.cppa3e8af309e46102f147c89b8ccfc3022b7b5fffd1639114815000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.eduVector -> Array fix to be consistent with new Array*Function nomenclature 2021-12-09 21:40:15 -0800a3e8af309e46102f147c89b8ccfc3022b7b5fffdVector -> Array fix to be consistent with new Array*Function nomenclatureedittest/unit/pde/OutputCell_SolutionErrorSquared_btest.cpptest/unit/pde/AnalyticFunction/ArrayFunction2D_btest.cppsrc/pde/AnalyticFunction/ArrayFunction2D.heecf03351160a62f1bf5b5e369983e7b5ac9e00b1639177426000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.eduadded Array2Function2D class (2-component, each an analytic function) with unit test; needed by OutputCell_SolutionErrorSquared_btest 2021-12-10 15:03:46 -0800eecf03351160a62f1bf5b5e369983e7b5ac9e00badded Array2Function2D class (2-component, each an analytic function) with unit test;edittest/unit/pde/AnalyticFunction/ArrayFunction2D_btest.cppeditsrc/pde/AnalyticFunction/ArrayFunction2D.hsrc/pde/AnalyticFunction/ScalarFunction3D.h883a1b6782228f3c4b21b2d2c801f7de7fe10c701639177765000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.eduadded PyDict options for xz and yz angle offsets for 3D corner singularity 2021-12-10 15:09:25 -0800883a1b6782228f3c4b21b2d2c801f7de7fe10c70added PyDict options for xz and yz angle offsets for 3D corner singularityeditsrc/pde/AnalyticFunction/ScalarFunction3D.htest/sandbox/grids/Joukowski_Mesh/Joukowski_RANS.pytest/sandbox/grids/Joukowski_Mesh/curve.pytest/sandbox/grids/Joukowski_Mesh/Challenge.pysrc/Discretization/Potential_Adjoint/IntegrandBoundaryTrace_WakeCut_CG_FP_Virtual.htest/sandbox/grids/Joukowski_Mesh/joukowski.egadstest/sandbox/grids/Joukowski_Mesh/grm.pytest/sandbox/grids/Joukowski_Mesh/Classic.pytest/sandbox/Adapt2D_DGAdvective_Euler_Joukowski_Pointwise_toy.cpptest/sandbox/grids/Joukowski_Mesh/geo.pytest/sandbox/grids/Joukowski_Mesh/writer.pytest/sandbox/grids/Joukowski_Mesh/cgns.pytest/sandbox/grids/Joukowski_Mesh/csm.pytest/sandbox/grids/Joukowski_Mesh/pg2d.pytest/sandbox/grids/Joukowski_Mesh/plot3d.pytest/sandbox/grids/Joukowski_Mesh/fec.pytest/sandbox/grids/Joukowski_Mesh/gmsh.pytest/sandbox/grids/Joukowski_Mesh/ebg.pytest/sandbox/grids/Joukowski_Mesh/ugrid.pytest/sandbox/grids/Joukowski_Mesh/vtk.pyc656874428d8621117cca078c93dfc82f19012301639200283000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFixes for running Joukowski with avro and refine 2021-12-11 00:24:43 -0500c656874428d8621117cca078c93dfc82f1901230Fixes for running Joukowski with avro and refineaddtest/sandbox/grids/Joukowski_Mesh/ebg.pyaddtest/sandbox/grids/Joukowski_Mesh/fec.pyaddtest/sandbox/grids/Joukowski_Mesh/Joukowski_RANS.pyedittest/sandbox/Adapt2D_DGAdvective_Euler_Joukowski_Pointwise_toy.cppeditsrc/Discretization/Potential_Adjoint/IntegrandBoundaryTrace_WakeCut_CG_FP_Virtual.haddtest/sandbox/grids/Joukowski_Mesh/cgns.pyaddtest/sandbox/grids/Joukowski_Mesh/Challenge.pyaddtest/sandbox/grids/Joukowski_Mesh/plot3d.pyaddtest/sandbox/grids/Joukowski_Mesh/curve.pyaddtest/sandbox/grids/Joukowski_Mesh/joukowski.egadsaddtest/sandbox/grids/Joukowski_Mesh/Classic.pyaddtest/sandbox/grids/Joukowski_Mesh/geo.pyaddtest/sandbox/grids/Joukowski_Mesh/csm.pyaddtest/sandbox/grids/Joukowski_Mesh/grm.pyaddtest/sandbox/grids/Joukowski_Mesh/ugrid.pyaddtest/sandbox/grids/Joukowski_Mesh/writer.pyaddtest/sandbox/grids/Joukowski_Mesh/gmsh.pyaddtest/sandbox/grids/Joukowski_Mesh/pg2d.pyaddtest/sandbox/grids/Joukowski_Mesh/vtk.pysrc/Meshing/EGTess/EGTriangle.cpp48cd4070dde5f5f610a7d764c69d45454833e6e71639200412000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFixes for triangle 2021-12-11 00:26:52 -050048cd4070dde5f5f610a7d764c69d45454833e6e7Fixes for triangleeditsrc/Meshing/EGTess/EGTriangle.cppsrc/Meshing/EGTess/EGTriangle.cpp28efe1af90f0e2c824bb3d8512bf32e5b2acbe671639278078000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFix for triangle with holes 2021-12-11 22:01:18 -050028efe1af90f0e2c824bb3d8512bf32e5b2acbe67Fix for triangle with holeseditsrc/Meshing/EGTess/EGTriangle.cppsrc/pde/FullPotential/PDEFullPotential3D.h2320348b076b14edda2bd3ab9245595413b905101639415966000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edusome cleanup on full potential PDE 2021-12-13 12:19:26 -05002320348b076b14edda2bd3ab9245595413b90510some cleanup on full potential PDEeditsrc/pde/FullPotential/PDEFullPotential3D.hsrc/Discretization/Galerkin/AlgebraicEquationSet_Project.hsrc/Discretization/Block/AlgebraicEquationSet_Block3x3_impl.hsrc/LinearAlgebra/AlgebraicEquationSetBase.hsrc/NonLinearSolver/LineUpdate/HalvingSearchLineUpdate_impl.hsrc/Discretization/AlgebraicEquationSet_Debug.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D.hsrc/Discretization/Block/AlgebraicEquationSet_Block4x4_impl.h11628d6868f698ca24544b491bc332f9aa38796b1639498493000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edurefactored and added to residualDecreaseStatus(.) 2021-12-14 11:14:53 -050011628d6868f698ca24544b491bc332f9aa38796brefactored and added to residualDecreaseStatus(.)editsrc/Discretization/AlgebraicEquationSet_Debug.heditsrc/Discretization/Block/AlgebraicEquationSet_Block3x3_impl.heditsrc/Discretization/Block/AlgebraicEquationSet_Block4x4_impl.heditsrc/NonLinearSolver/LineUpdate/HalvingSearchLineUpdate_impl.heditsrc/Discretization/Galerkin/AlgebraicEquationSet_Project.heditsrc/LinearAlgebra/AlgebraicEquationSetBase.heditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D.hsrc/NonLinearSolver/LineUpdate/HalvingSearchLineUpdate_impl.hsrc/Discretization/Block/AlgebraicEquationSet_Block4x4_impl.hsrc/Discretization/Block/AlgebraicEquationSet_Block3x3_impl.h578da6e9ca077a21f6d6f020aa0bb451ea0bceb21639546310000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edufixed over-array-bound access 2021-12-15 00:31:50 -0500578da6e9ca077a21f6d6f020aa0bb451ea0bceb2fixed over-array-bound accesseditsrc/NonLinearSolver/LineUpdate/HalvingSearchLineUpdate_impl.heditsrc/Discretization/Block/AlgebraicEquationSet_Block4x4_impl.heditsrc/Discretization/Block/AlgebraicEquationSet_Block3x3_impl.hsrc/LinearAlgebra/SparseLinAlg/ScalarMatrix_CRS_impl.h4d08b05e174b32f7ff0b0e23d6f91921491c63db1639546349000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduswitched assertions from runtime to compile time 2021-12-15 00:32:29 -05004d08b05e174b32f7ff0b0e23d6f91921491c63dbswitched assertions from runtime to compile timeeditsrc/LinearAlgebra/SparseLinAlg/ScalarMatrix_CRS_impl.htest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cpp8e342b1ef1ce7b461e8cb83e92ba3f10b8599bd61639546530000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edurefactored FP-IBL3 S-duct test case 2021-12-15 00:35:30 -05008e342b1ef1ce7b461e8cb83e92ba3f10b8599bd6refactored FP-IBL3 S-duct test caseedittest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cpptest/system/CodeConsistency/checkLinearSolver.ha6d8ac9b64605ba5126d658edfeb46c334fb70981639546575000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduforgot to commit this... refactored linear solution checker 2021-12-15 00:36:15 -0500a6d8ac9b64605ba5126d658edfeb46c334fb7098forgot to commit this... refactored linear solution checkeredittest/system/CodeConsistency/checkLinearSolver.hsrc/SolutionTrek/Continuation/PseudoTime/AlgebraicEquationSet_Block4x4_PTC_IBL.hsrc/SolutionTrek/Continuation/PseudoTime/AlgebraicEquationSet_PTC.h717bd1f22090ef58d282eeced104c9994e910a331639608114000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduremoved redundant partial specialization in AES_PTC 2021-12-15 17:41:54 -0500717bd1f22090ef58d282eeced104c9994e910a33removed redundant partial specialization in AES_PTCeditsrc/SolutionTrek/Continuation/PseudoTime/AlgebraicEquationSet_PTC.heditsrc/SolutionTrek/Continuation/PseudoTime/AlgebraicEquationSet_Block4x4_PTC_IBL.hsrc/SolutionTrek/Continuation/PseudoTime/AlgebraicEquationSet_PTC.hed8b84fd9504696a2f26551693d08b51736bd7b81639608825000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduannotated PTC implementation of paramfld_ and paramfldpast_ 2021-12-15 17:53:45 -0500ed8b84fd9504696a2f26551693d08b51736bd7b8annotated PTC implementation of paramfld_ and paramfldpast_editsrc/SolutionTrek/Continuation/PseudoTime/AlgebraicEquationSet_PTC.hsrc/NonLinearSolver/NewtonSolver_impl.hc49e70ce8ac25c80c0380e90a8f0bea5b9f3b7e81639608865000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edubeautified Newton iteration printout 2021-12-15 17:54:25 -0500c49e70ce8ac25c80c0380e90a8f0bea5b9f3b7e8beautified Newton iteration printouteditsrc/NonLinearSolver/NewtonSolver_impl.hsrc/LinearAlgebra/DenseLinAlg/StaticSize/MatrixS.heea202c0e347b59e071b9ce456664aedbe255e2f1639610282000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edurefactored an MatrixS constructor 2021-12-15 18:18:02 -0500eea202c0e347b59e071b9ce456664aedbe255e2frefactored an MatrixS constructoreditsrc/LinearAlgebra/DenseLinAlg/StaticSize/MatrixS.hsrc/Discretization/Galerkin/IntegrandCell_Galerkin_PTC.hff9eea63f6ca2379b65253cab06415b82f9d38c21639610791000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduadded comments 2021-12-15 18:26:31 -0500ff9eea63f6ca2379b65253cab06415b82f9d38c2added commentseditsrc/Discretization/Galerkin/IntegrandCell_Galerkin_PTC.hsrc/pde/FullPotential/PDEFullPotential3D.hsrc/SolutionTrek/Continuation/PseudoTime/AlgebraicEquationSet_Block4x4_PTC_FP_IBL3.htest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cppdcdf132e40c7932ba940b279595fea921c8361721639617917000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduenabled PTC for FP-IBL3 4x4 coupling 2021-12-15 20:25:17 -0500dcdf132e40c7932ba940b279595fea921c836172enabled PTC for FP-IBL3 4x4 couplingaddsrc/SolutionTrek/Continuation/PseudoTime/AlgebraicEquationSet_Block4x4_PTC_FP_IBL3.hedittest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cppeditsrc/pde/FullPotential/PDEFullPotential3D.htest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cpp635815688fd2b698daed87d596d69b6df7df2c1c1639634662000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edufixed FP and IBL side wall BC 2021-12-16 01:04:22 -0500635815688fd2b698daed87d596d69b6df7df2c1cfixed FP and IBL side wall BCedittest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cppsrc/Discretization/AlgebraicEquationSet_Debug.had2eb464eac77ffcd0a15b5c9118e19c910f48a51639634731000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edurefactored std::vector access to use bound checking 2021-12-16 01:05:31 -0500ad2eb464eac77ffcd0a15b5c9118e19c910f48a5refactored std::vector access to use bound checkingeditsrc/Discretization/AlgebraicEquationSet_Debug.hsrc/SolutionTrek/Continuation/PseudoTime/PseudoTime.h806135104fc92706523050affac9cab4fe1c5cae1639634754000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduadded comments on how/why CFL changes in PTC iterations 2021-12-16 01:05:54 -0500806135104fc92706523050affac9cab4fe1c5caeadded comments on how/why CFL changes in PTC iterationseditsrc/SolutionTrek/Continuation/PseudoTime/PseudoTime.hsrc/SolutionTrek/Continuation/PseudoTime/PseudoTime.hfc170ef5fec1a107a319478edbf41acbb672ef091639638284000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edurefactored PTC printout & dump 2021-12-16 02:04:44 -0500fc170ef5fec1a107a319478edbf41acbb672ef09refactored PTC printout & dumpeditsrc/SolutionTrek/Continuation/PseudoTime/PseudoTime.htest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cppb26f7053715112c2b28e921d5c496ccd2a2e006d1639683006000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduminor tweak to test case 2021-12-16 14:30:06 -0500b26f7053715112c2b28e921d5c496ccd2a2e006dminor tweak to test caseedittest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cpptest/unit/UnitGrids/XField3D_Box_Hex_X1.cpptest/sandbox/Solve3D_CG_FP_duct_toy.cpptest/unit/UnitGrids/XField3D_Box_Hex_X1.htest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cpp2cce25ef8afec1fa7d6fcfd813101d03c0de64b61640049156000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduRefactored S-duct box grid 2021-12-20 20:12:36 -05002cce25ef8afec1fa7d6fcfd813101d03c0de64b6Refactored S-duct box gridedittest/unit/UnitGrids/XField3D_Box_Hex_X1.cppedittest/unit/UnitGrids/XField3D_Box_Hex_X1.hedittest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cppedittest/sandbox/Solve3D_CG_FP_duct_toy.cpptest/sandbox/Solve3D_CG_NACA_FP_Virtual_toy.cpptest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cppsrc/pde/FullPotential/BCFullPotential3D.htest/sandbox/Solve3D_CG_NACA_FP_Drela_toy.cpptest/sandbox/Solve3D_CG_FP_duct_toy.cppsrc/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.htest/sandbox/Solve3D_CG_NACA_FP_MD_toy.cppsrc/pde/FullPotential/BCFullPotential3D.cppe18ed4865f6c1ff19bbe57ca63257e0d2141f3c01640063576000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduCleaned up 3D FP BC 2021-12-21 00:12:56 -0500e18ed4865f6c1ff19bbe57ca63257e0d2141f3c0Cleaned up 3D FP BCeditsrc/pde/FullPotential/BCFullPotential3D.cppeditsrc/pde/FullPotential/BCFullPotential3D.hedittest/sandbox/Solve3D_CG_NACA_FP_Drela_toy.cppedittest/sandbox/Solve3D_CG_NACA_FP_Virtual_toy.cppeditsrc/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.hedittest/sandbox/Solve3D_CG_FP_duct_toy.cppedittest/sandbox/Solve3D_CG_NACA_FP_MD_toy.cppedittest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppsrc/pde/IBL/ProjectToQauxi_FullPotential3D.hbd43e6eb40ed72eff6717193c84a634c6a03e9081640101488000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edusome cleanup 2021-12-21 10:44:48 -0500bd43e6eb40ed72eff6717193c84a634c6a03e908some cleanupedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppeditsrc/pde/IBL/ProjectToQauxi_FullPotential3D.hsrc/Discretization/Galerkin/JacobianCell_Galerkin.hsrc/Discretization/Galerkin/ResidualCell_Galerkin.h212ed38010f8f69d63b56280994c5bc7ead002511640101691000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduadded commented out code for timing 2021-12-21 10:48:11 -0500212ed38010f8f69d63b56280994c5bc7ead00251added commented out code for timingeditsrc/Discretization/Galerkin/JacobianCell_Galerkin.heditsrc/Discretization/Galerkin/ResidualCell_Galerkin.hsrc/pde/FullPotential/BCFullPotential3D.h9c4da9fa9698af08728cc238c175f221417a11811640101758000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edufixed warnings 2021-12-21 10:49:18 -05009c4da9fa9698af08728cc238c175f221417a1181fixed warningseditsrc/pde/FullPotential/BCFullPotential3D.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PiecewiseConstSourcePanel_FlatPlate3D.h43a99cd8149a99bfcb860a13ed64a537795d8eb61640102080000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduadded sanity check. some cleanup 2021-12-21 10:54:40 -050043a99cd8149a99bfcb860a13ed64a537795d8eb6added sanity check. some cleanupeditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PiecewiseConstSourcePanel_FlatPlate3D.hsrc/pde/IBL/PDEIBLFourEqn3D.h063cb5376166f9142c550ef43896ad91d6545e7a1640108744000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.educhanged IBL3 surface normal orientation convention to be compatible with FP-IBL3 coupling 2021-12-21 12:45:44 -0500063cb5376166f9142c550ef43896ad91d6545e7achanged IBL3 surface normal orientation convention to be compatible with FP-IBL3 couplingeditsrc/pde/IBL/PDEIBLFourEqn3D.hsrc/pde/IBL/IntegrandCell_ProjectToQauxv_FullPotential3D.h9e17d065dc50eda643717c7ef545966b89000e351640108826000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduRefactored projection onto Qauxv to be only in-surface velocity components in FP-IBL3 coupling 2021-12-21 12:47:06 -05009e17d065dc50eda643717c7ef545966b89000e35Refactored projection onto Qauxv to be only in-surface velocity components in FP-IBL3 couplingeditsrc/pde/IBL/IntegrandCell_ProjectToQauxv_FullPotential3D.hsrc/Discretization/Galerkin/IntegrandCell_Galerkin_manifold_IBL3D.h71a3ebe5389e2385bf27dd2986842add9ba33b841640127096000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduadded assertion to guard against misuse 2021-12-21 17:51:36 -050071a3ebe5389e2385bf27dd2986842add9ba33b84added assertion to guard against misuseeditsrc/Discretization/Galerkin/IntegrandCell_Galerkin_manifold_IBL3D.hsrc/pde/IBL/ProjectToQauxi_Panel3D.htest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cpptest/sandbox/Solve3D_Coupled3x3_IBL_FlatPlate_RadialStagnationFlow_toy.cppsrc/PanelMethod/AlgebraicEquationSet_ProjectToQauxi_FlatPlate3D.htest/unit/PanelMethod/ProjectToQauxi_IBL3D_btest.cppsrc/pde/IBL/JacobianParam_ProjectToQauxi_Qauxv.hsrc/pde/IBL/JacobianParam_ProjectToQauxi_QIBL.htest/sandbox/Solve3D_Coupled3x3_IBL_FlatPlate_torpedo_toy.cppsrc/PanelMethod/ProjectToQauxi_IBL3D.htest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Triangle_btest.cpptest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cppsrc/pde/IBL/ProjectToQauxi_FullPotential3D.h7f147920d16d42e598c6dd03d99f2cd46a7750d81640137551000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduConsolidated auxi equation implementation for 3D full potential and panel 2021-12-21 20:45:51 -05007f147920d16d42e598c6dd03d99f2cd46a7750d8Consolidated auxi equation implementation for 3D full potential and paneldeletesrc/PanelMethod/AlgebraicEquationSet_ProjectToQauxi_FlatPlate3D.hedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Triangle_btest.cppedittest/sandbox/Solve3D_Coupled3x3_IBL_FlatPlate_torpedo_toy.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cppaddsrc/pde/IBL/ProjectToQauxi_Panel3D.hdeletesrc/pde/IBL/JacobianParam_ProjectToQauxi_QIBL.hedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cppedittest/unit/PanelMethod/ProjectToQauxi_IBL3D_btest.cppedittest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cppdeletesrc/pde/IBL/JacobianParam_ProjectToQauxi_Qauxv.hdeletesrc/PanelMethod/ProjectToQauxi_IBL3D.hedittest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cppedittest/sandbox/Solve3D_Coupled3x3_IBL_FlatPlate_RadialStagnationFlow_toy.cppeditsrc/pde/IBL/ProjectToQauxi_FullPotential3D.hsrc/pde/IBL/PDEIBLFourEqn3D.h13ce76377d81ca460169b8baec3810d3656034e51640148721000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduminor cleanup 2021-12-21 23:52:01 -050013ce76377d81ca460169b8baec3810d3656034e5minor cleanupeditsrc/pde/IBL/PDEIBLFourEqn3D.hsrc/pde/IBL/IntegrandCell_ProjectToQauxi3D.htest/unit/PanelMethod/ProjectToQauxi_IBL3D_btest.cppsrc/pde/IBL/ProjectToQauxi3D.hsrc/pde/IBL/ProjectToQauxi_Panel3D.htest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cpptest/sandbox/Solve3D_Coupled3x3_IBL_FlatPlate_torpedo_toy.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cpptest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Triangle_btest.cpptest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppsrc/pde/IBL/ProjectToQauxi_FullPotential3D.hb0c54b7339b3aff2222ef8246f77ae851874dd601640154193000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduMerged ProjectToQauxi3D implementation for panel and FP coupling with IBL3 2021-12-22 01:23:13 -0500b0c54b7339b3aff2222ef8246f77ae851874dd60Merged ProjectToQauxi3D implementation for panel and FP coupling with IBL3edittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppedittest/unit/PanelMethod/ProjectToQauxi_IBL3D_btest.cppedittest/sandbox/Solve3D_Coupled3x3_IBL_FlatPlate_torpedo_toy.cppaddsrc/pde/IBL/ProjectToQauxi3D.heditsrc/pde/IBL/IntegrandCell_ProjectToQauxi3D.hedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cppdeletesrc/pde/IBL/ProjectToQauxi_Panel3D.hedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Triangle_btest.cppedittest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cppdeletesrc/pde/IBL/ProjectToQauxi_FullPotential3D.hedittest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cpptest/sandbox/Solve3D_Coupled3x3_IBL_FlatPlate_RadialStagnationFlow_toy.cpp40ba2931e8d2c57bacd07331024841e75a0c32b81640154906000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edumore cleanup on include 2021-12-22 01:35:06 -050040ba2931e8d2c57bacd07331024841e75a0c32b8more cleanup on includeedittest/sandbox/Solve3D_Coupled3x3_IBL_FlatPlate_RadialStagnationFlow_toy.cppsrc/Discretization/Galerkin/IntegrandInteriorTrace_Galerkin_manifold2D.htest/sandbox/Solve3D_Uncoupled_IBL_FlatPlate_Blasius_toy.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cpptest/system/AnalyticSolve/AnalyticSolve_IBL3D_StagnationFlow_LamiBL_Triangle_btest.cppsrc/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_CutcellTransitionIBL.hsrc/PanelMethod/AlgebraicEquationSet_ProjectToQauxi.hsrc/Discretization/Galerkin/IntegrandInteriorTrace_Galerkin_manifold.hsrc/pde/IBL/ProjectToQauxi3D.htest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Triangle_btest.cpptest/system/AnalyticSolve/AnalyticSolve3D_IBLFourEqn_StagnationFlow_LamiBL_Triangle_btest.cpptest/sandbox/Solve3D_Uncoupled_IBLFourEqn_FlatPlate_Blasius_toy.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cppsrc/Discretization/Galerkin/IntegrandInteriorTrace_Galerkin_manifold3D.hsrc/Discretization/Galerkin/IntegrandInteriorTrace_Galerkin_manifold_IBL3D.hsrc/Discretization/DG/AlgebraicEquationSet_TransitionIBL.htest/unit/Discretization/Galerkin/IntegrandInteriorTrace_Galerkin_manifold_IBL2D_btest_outdated.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi3D.htest/sandbox/Solve3D_Coupled3x3_IBL_FlatPlate_torpedo_toy.cpptest/sandbox/Solve3D_Uncoupled_IBLFourEqn_FlatPlate_StagnationRadial_toy.cppsrc/pde/IBL/IntegrandInteriorTrace_ProjectToQauxi3D.htest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cppsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective.htest/unit/Discretization/Galerkin/JacobianInteriorTrace_Galerkin_Param_IBL2D_btest_outdated.cpped366e8f80cdaf8b54ac3f01a88dcd8fa459768e1640187380000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduCleaned up and merged interior trace integrand for IBL3 and Auxi. Renamed files 2021-12-22 10:36:20 -0500ed366e8f80cdaf8b54ac3f01a88dcd8fa459768eCleaned up and merged interior trace integrand for IBL3 and Auxi. Renamed filesedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cppedittest/unit/Discretization/Galerkin/IntegrandInteriorTrace_Galerkin_manifold_IBL2D_btest_outdated.cppdeletesrc/Discretization/Galerkin/IntegrandInteriorTrace_Galerkin_manifold.hedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cppdeletesrc/Discretization/Galerkin/IntegrandInteriorTrace_Galerkin_manifold_IBL3D.heditsrc/Discretization/DG/AlgebraicEquationSet_TransitionIBL.hedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppeditsrc/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_CutcellTransitionIBL.hedittest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cppeditsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective.hedittest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cppedittest/sandbox/Solve3D_Uncoupled_IBLFourEqn_FlatPlate_StagnationRadial_toy.cppedittest/system/AnalyticSolve/AnalyticSolve3D_IBLFourEqn_StagnationFlow_LamiBL_Triangle_btest.cppeditsrc/pde/IBL/ProjectToQauxi3D.hedittest/sandbox/Solve3D_Uncoupled_IBL_FlatPlate_Blasius_toy.cppaddsrc/Discretization/Galerkin/IntegrandInteriorTrace_Galerkin_manifold2D.heditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi3D.hedittest/sandbox/Solve3D_Uncoupled_IBLFourEqn_FlatPlate_Blasius_toy.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Triangle_btest.cppeditsrc/PanelMethod/AlgebraicEquationSet_ProjectToQauxi.hedittest/system/AnalyticSolve/AnalyticSolve_IBL3D_StagnationFlow_LamiBL_Triangle_btest.cppedittest/sandbox/Solve3D_Coupled3x3_IBL_FlatPlate_torpedo_toy.cppdeletesrc/pde/IBL/IntegrandInteriorTrace_ProjectToQauxi3D.haddsrc/Discretization/Galerkin/IntegrandInteriorTrace_Galerkin_manifold3D.hedittest/unit/Discretization/Galerkin/JacobianInteriorTrace_Galerkin_Param_IBL2D_btest_outdated.cpptest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cppc53d2f4d99f996ef50d9de8b89169e17798d81601640187814000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduadded missing include that was accidentally removed 2021-12-22 10:43:34 -0500c53d2f4d99f996ef50d9de8b89169e17798d8160added missing include that was accidentally removededittest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cppsrc/Discretization/Galerkin/IntegrandInteriorTrace_Galerkin_manifold2D.htest/sandbox/Solve3D_Uncoupled_IBL_FlatPlate_Blasius_toy.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cpptest/sandbox/Solve3D_Uncoupled_IBLFourEqn_FlatPlate_Blasius_toy.cppsrc/Discretization/Galerkin/IntegrandCell_Galerkin_manifold_IBL3D.htest/sandbox/Solve3D_Coupled3x3_IBL_FlatPlate_RadialStagnationFlow_toy.cppsrc/Discretization/Galerkin/IntegrandInteriorTrace_Galerkin_manifold3D.hsrc/Discretization/Galerkin/IntegrandCell_Galerkin_manifold.htest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cpptest/system/AnalyticSolve/AnalyticSolve_IBL3D_StagnationFlow_LamiBL_Triangle_btest.cpptest/sandbox/Solve3D_Coupled3x3_IBL_FlatPlate_torpedo_toy.cpptest/sandbox/Solve3D_Uncoupled_IBLFourEqn_FlatPlate_StagnationRadial_toy.cpptest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cppsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective.h05b7b89dcc4595253e77be836ae56aa2f8e2bfb51640189349000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.educleaned up include related to 2D/3D manifold cell integrands 2021-12-22 11:09:09 -050005b7b89dcc4595253e77be836ae56aa2f8e2bfb5cleaned up include related to 2D/3D manifold cell integrandseditsrc/Discretization/Galerkin/IntegrandCell_Galerkin_manifold_IBL3D.heditsrc/Discretization/Galerkin/IntegrandCell_Galerkin_manifold.hedittest/system/AnalyticSolve/AnalyticSolve_IBL3D_StagnationFlow_LamiBL_Triangle_btest.cppedittest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cppeditsrc/Discretization/Galerkin/IntegrandInteriorTrace_Galerkin_manifold2D.hedittest/sandbox/Solve3D_Coupled3x3_IBL_FlatPlate_torpedo_toy.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cppedittest/sandbox/Solve3D_Coupled3x3_IBL_FlatPlate_RadialStagnationFlow_toy.cppedittest/sandbox/Solve3D_Uncoupled_IBLFourEqn_FlatPlate_StagnationRadial_toy.cppedittest/sandbox/Solve3D_Uncoupled_IBL_FlatPlate_Blasius_toy.cppeditsrc/Discretization/Galerkin/IntegrandInteriorTrace_Galerkin_manifold3D.heditsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective.hedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppedittest/sandbox/Solve3D_Uncoupled_IBLFourEqn_FlatPlate_Blasius_toy.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Triangle_btest.cpptest/system/AnalyticSolve/AnalyticSolve3D_IBLFourEqn_StagnationFlow_LamiBL_Triangle_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cpp3c5eb1349cbe8f4f7f11bd50c9e1729660ac62541640189532000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edumore cleanup of include 2021-12-22 11:12:12 -05003c5eb1349cbe8f4f7f11bd50c9e1729660ac6254more cleanup of includeedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Triangle_btest.cppedittest/system/AnalyticSolve/AnalyticSolve3D_IBLFourEqn_StagnationFlow_LamiBL_Triangle_btest.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cpptest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cpp80b6bf386f138332cd92d03220aa4d893121163c1640716307000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduCleaned up panel+IBL3 case 2021-12-28 13:31:47 -050080b6bf386f138332cd92d03220aa4d893121163cCleaned up panel+IBL3 caseedittest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cppsrc/pde/IBL/PDEIBLFourEqn3D.h114ee3b479a94e96d0dfd36efd5314d7db6af9511640716438000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduadded option in IBL3 to choose how nrm_surf orientation relates to e1 and e2 2021-12-28 13:33:58 -0500114ee3b479a94e96d0dfd36efd5314d7db6af951added option in IBL3 to choose how nrm_surf orientation relates to e1 and e2editsrc/pde/IBL/PDEIBLFourEqn3D.htest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cpptest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cppf2d6e175824fe696846e509eb446a68356408caa1640727046000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduminor test case cleanup/tweaks 2021-12-28 16:30:46 -0500f2d6e175824fe696846e509eb446a68356408caaminor test case cleanup/tweaksedittest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cppedittest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cppsrc/pde/IBL/PDEIBLFourEqn3D.h8d62e9d9f9b51febee4f18d22dcb76f42523401e1640727097000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduturned off (1) LF flux, (2) mass correction to flux and (3) amp+lag equations for IBL3 2021-12-28 16:31:37 -05008d62e9d9f9b51febee4f18d22dcb76f42523401eturned off (1) LF flux, (2) mass correction to flux and (3) amp+lag equations for IBL3editsrc/pde/IBL/PDEIBLFourEqn3D.hsrc/pde/FullPotential/BCFullPotential3D.h462b15a383644830e5858dbf3d52931f483af26b1640735352000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edufixed style 2021-12-28 18:49:12 -0500462b15a383644830e5858dbf3d52931f483af26bfixed styleeditsrc/pde/FullPotential/BCFullPotential3D.hsrc/pde/IBL/ProjectToQauxi3D.hf759ee4f0e04103663975ec63412784fd95d52761640735444000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edurefactored param tuple type for better consistency between indexing, ParamTuple and FieldTuple 2021-12-28 18:50:44 -0500f759ee4f0e04103663975ec63412784fd95d5276refactored param tuple type for better consistency between indexing, ParamTuple and FieldTupleeditsrc/pde/IBL/ProjectToQauxi3D.htest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppsrc/pde/IBL/ProjectToQauxi3D.htest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cpp6a100e779b747ff32fe226ffbe965bd8b6c350881640735969000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edurenamed parameter field type 2021-12-28 18:59:29 -05006a100e779b747ff32fe226ffbe965bd8b6c35088renamed parameter field typeedittest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cppedittest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppeditsrc/pde/IBL/ProjectToQauxi3D.htest/sandbox/Solve3D_Coupled3x3_IBL_FlatPlate_RadialStagnationFlow_toy.cppsrc/pde/IBL/PDEIBLFourEqn3D.htest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cppa188e6c9737a93fa4af75351ba6c31c16d8a569e1640746806000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edurefactored parameter type for IBL3 2021-12-28 22:00:06 -0500a188e6c9737a93fa4af75351ba6c31c16d8a569erefactored parameter type for IBL3edittest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cppedittest/sandbox/Solve3D_Coupled3x3_IBL_FlatPlate_RadialStagnationFlow_toy.cppeditsrc/pde/IBL/PDEIBLFourEqn3D.hsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Euler1D_AV1D_Primitive.cppsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Sensor2D_AUSJump_Euler2D_Conservative.cppsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Sensor2D_AUSJump_Euler2D_Primitive.cppsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Sensor1D_AUSJump_Euler1D_Conservative.cppsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Sensor2D_AUSJump_AD.cppsrc/Discretization/JacobianParam_impl.hsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Euler2D_AV2D_Primitive.cppsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Euler2D_AV2D_Conservative.cppsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Sensor1D_AUSJump_BuckleyLeverett1D.cppsrc/Discretization/DG/AlgebraicEquationSet_DGBR2_impl.hsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Sensor2D_AUSJump_Euler1D_Conservative.cppsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective_impl.hsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Burgers_AV1D_DUSUG.cppsrc/Discretization/Galerkin/AlgebraicEquationSet_Project.hsrc/Discretization/DG/AlgebraicEquationSet_DGBR2.hsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Euler1D_AV1D_Conservative.cppsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_BuckleyLeverett_AV1D.cppsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_AD_AV2D_AUDUSUG.cppsrc/Discretization/JacobianParam_Local.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi3D.hsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Sensor1D_AUSJump_AD.cppsrc/Adaptation/MOESS/SolverInterface_DGBR2_Block2x2.hsrc/Discretization/JacobianParam.htest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cppsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective.h7c84f6a4c2939ae0c5d601395c985736152e09471640846999000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edurefactored JacobianParam class since the previous implementation is quite limiting 2021-12-30 01:49:59 -05007c84f6a4c2939ae0c5d601395c985736152e0947refactored JacobianParam class since the previous implementation is quite limitingeditsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Sensor1D_AUSJump_BuckleyLeverett1D.cppeditsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Sensor2D_AUSJump_AD.cppeditsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective.heditsrc/Discretization/DG/AlgebraicEquationSet_DGBR2_impl.heditsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Burgers_AV1D_DUSUG.cppeditsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Euler2D_AV2D_Conservative.cppeditsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Euler1D_AV1D_Conservative.cppeditsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Sensor1D_AUSJump_Euler1D_Conservative.cppeditsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_BuckleyLeverett_AV1D.cppeditsrc/Discretization/Galerkin/AlgebraicEquationSet_Project.heditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi3D.hedittest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cppeditsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective_impl.heditsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Sensor2D_AUSJump_Euler1D_Conservative.cppeditsrc/Adaptation/MOESS/SolverInterface_DGBR2_Block2x2.heditsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Euler2D_AV2D_Primitive.cppeditsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Euler1D_AV1D_Primitive.cppeditsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Sensor2D_AUSJump_Euler2D_Conservative.cppeditsrc/Discretization/JacobianParam_impl.heditsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_AD_AV2D_AUDUSUG.cppeditsrc/Discretization/JacobianParam_Local.heditsrc/Discretization/JacobianParam.heditsrc/Discretization/DG/AlgebraicEquationSet_DGBR2.heditsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Sensor1D_AUSJump_AD.cppeditsrc/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Sensor2D_AUSJump_Euler2D_Primitive.cpptest/sandbox/Solve2D_Coupled4x4_IBLSplitAmpLag_CorrelationClosure_CapturedTransition_PTC_toy.cpptest/system/CodeConsistency/Solve2D_Coupled4x4_IBL_Panel_NACA0004_FittedTransition_TwoLayerNewton_btest.cpptest/sandbox/Solve2D_Coupled4x4_IBL_fx67k170_toy.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block2x2_DGBR2_Line_Euler1DSensor_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cpptest/sandbox/Solve3D_Coupled3x3_IBL_FlatPlate_RadialStagnationFlow_toy.cpptest/sandbox/Solve2D_Coupled4x4_IBL_fx67k170_drag_polar_toy.cpptest/sandbox/Solve1D_DGBR2_Burgers_ArtificialViscosity_toy.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block2x2_DGBR2_BuckleyLeverett_ArtificialViscosity_ST_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block2x2_DGBR2_Triangle_BuckleyLeverett_AV_btest.cpptest/sandbox/Solve1D_DGBR2_BuckleyLeverett_ArtificialViscosity_ST_toy.cpptest/system/CodeConsistency/Solve2D_Coupled4x4_IBLSplitAmpLag_CorrelationClosure_CapturedTransition_PTC_btest.cpptest/sandbox/Solve3D_Coupled3x3_IBL_FlatPlate_torpedo_toy.cpptest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cppc3c1181317043025aa7972bc37fd1366daef5a2b1640847622000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduupdated JacobianParam usage in test cases following its refactoring 2021-12-30 02:00:22 -0500c3c1181317043025aa7972bc37fd1366daef5a2bupdated JacobianParam usage in test cases following its refactoringedittest/sandbox/Solve2D_Coupled4x4_IBLSplitAmpLag_CorrelationClosure_CapturedTransition_PTC_toy.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block2x2_DGBR2_Triangle_BuckleyLeverett_AV_btest.cppedittest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cppedittest/sandbox/Solve1D_DGBR2_BuckleyLeverett_ArtificialViscosity_ST_toy.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block2x2_DGBR2_Line_Euler1DSensor_btest.cppedittest/sandbox/Solve2D_Coupled4x4_IBL_fx67k170_toy.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block2x2_DGBR2_BuckleyLeverett_ArtificialViscosity_ST_btest.cppedittest/system/CodeConsistency/Solve2D_Coupled4x4_IBLSplitAmpLag_CorrelationClosure_CapturedTransition_PTC_btest.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cppedittest/sandbox/Solve3D_Coupled3x3_IBL_FlatPlate_RadialStagnationFlow_toy.cppedittest/system/CodeConsistency/Solve2D_Coupled4x4_IBL_Panel_NACA0004_FittedTransition_TwoLayerNewton_btest.cppedittest/sandbox/Solve1D_DGBR2_Burgers_ArtificialViscosity_toy.cppedittest/sandbox/Solve2D_Coupled4x4_IBL_fx67k170_drag_polar_toy.cppedittest/sandbox/Solve3D_Coupled3x3_IBL_FlatPlate_torpedo_toy.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellNaturalTransitionIBLUniField_Panel_btest_outdated.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_HDGAdvIBL_Panel_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_HubtraceHDGAdvIBL_CutCellNaturalTransition_Panel_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellNaturalTransitionIBL_Panel_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellForcedTransitionIBL_Panel_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_IBL_Panel_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Triangle_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellForcedTransitionIBLUniField_Panel_btest_outdated.cpp75fa0361780b4858a303b213e61de49a42d1854e1640847893000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edumore cleanup on JacobianParam usage 2021-12-30 02:04:53 -050075fa0361780b4858a303b213e61de49a42d1854emore cleanup on JacobianParam usageedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_HubtraceHDGAdvIBL_CutCellNaturalTransition_Panel_btest.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellNaturalTransitionIBLUniField_Panel_btest_outdated.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellForcedTransitionIBLUniField_Panel_btest_outdated.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellForcedTransitionIBL_Panel_btest.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_HDGAdvIBL_Panel_btest.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellNaturalTransitionIBL_Panel_btest.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_IBL_Panel_btest.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Triangle_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Triangle_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cpptest/sandbox/Solve3D_Coupled3x3_IBL_FlatPlate_RadialStagnationFlow_toy.cpptest/sandbox/Solve3D_Coupled3x3_IBL_FlatPlate_torpedo_toy.cpp88c54d18df1f29d7d1d4491b338690ab301a91201640850192000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduupdated use cases involving Auxi equation in panel+IBL3. deleted sandbox cases that are not worth maintaining 2021-12-30 02:43:12 -050088c54d18df1f29d7d1d4491b338690ab301a9120updated use cases involving Auxi equation in panel+IBL3. deleted sandbox cases that are not worth maintainingedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cppdeletetest/sandbox/Solve3D_Coupled3x3_IBL_FlatPlate_RadialStagnationFlow_toy.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Triangle_btest.cppdeletetest/sandbox/Solve3D_Coupled3x3_IBL_FlatPlate_torpedo_toy.cpptest/sandbox/Solve3D_Uncoupled_IBLFourEqn_FlatPlate_StagnationRadial_toy.cpptest/system/AnalyticSolve/AnalyticSolve3D_IBLFourEqn_StagnationFlow_LamiBL_Triangle_btest.cpptest/sandbox/Solve3D_Uncoupled_IBLFourEqn_FlatPlate_Blasius_toy.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cppff038f9a881a5994c551241cac80b2f9dd42d35b1640850505000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduupdated use cases of new PDEIBL3FourEqn API 2021-12-30 02:48:25 -0500ff038f9a881a5994c551241cac80b2f9dd42d35bupdated use cases of new PDEIBL3FourEqn APIedittest/system/AnalyticSolve/AnalyticSolve3D_IBLFourEqn_StagnationFlow_LamiBL_Triangle_btest.cppedittest/sandbox/Solve3D_Uncoupled_IBLFourEqn_FlatPlate_StagnationRadial_toy.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cppedittest/sandbox/Solve3D_Uncoupled_IBLFourEqn_FlatPlate_Blasius_toy.cppsrc/pde/FullPotential/BCFullPotential3D.hsrc/pde/FullPotential/PDEFullPotential3D.htest/unit/IO/pde/BCFullPotential3D_pattern.txttest/unit/pde/FullPotential/BCFullPotential3D_btest.cpptest/unit/pde/FullPotential/PDEFullPotential3D_btest.cpp1485e83b99ba14fade1f4bb0fa15216265de8c7f1640903627000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edufixed full potential unit tests 2021-12-30 17:33:47 -05001485e83b99ba14fade1f4bb0fa15216265de8c7ffixed full potential unit testseditsrc/pde/FullPotential/BCFullPotential3D.heditsrc/pde/FullPotential/PDEFullPotential3D.hedittest/unit/IO/pde/BCFullPotential3D_pattern.txtedittest/unit/pde/FullPotential/BCFullPotential3D_btest.cppedittest/unit/pde/FullPotential/PDEFullPotential3D_btest.cppsrc/pde/IBL/ProjectToQauxi3D.h3d42b8b88f1390e743ec84e97be82309a625b5e31640906960000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edufixed a bug/typo: flipped divM and divM_rhoe flux calculation for Auxi. Fortunately, the effect on current test cases is minimal since they are incompressible flows 2021-12-30 18:29:20 -05003d42b8b88f1390e743ec84e97be82309a625b5e3fixed a bug/typo: flipped divM and divM_rhoe flux calculation for Auxi. Fortunately, the effect on current test cases is minimal since they are incompressible flowseditsrc/pde/IBL/ProjectToQauxi3D.htest/unit/pde/IBL/ProjectToQauxi_IBL3D_btest.cppsrc/pde/IBL/ProjectToQauxi3D.htest/unit/PanelMethod/ProjectToQauxi_IBL3D_btest.cppa9d9c0ba7ba6e9d97bbdaa8679c428ef8f46848d1640906993000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edufixed IBL unit tests 2021-12-30 18:29:53 -0500a9d9c0ba7ba6e9d97bbdaa8679c428ef8f46848dfixed IBL unit testsaddtest/unit/pde/IBL/ProjectToQauxi_IBL3D_btest.cppeditsrc/pde/IBL/ProjectToQauxi3D.hdeletetest/unit/PanelMethod/ProjectToQauxi_IBL3D_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Triangle_btest.cppsrc/pde/IBL/PDEIBLFourEqn3D.hsrc/pde/IBL/PDEIBL3D.htest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cppa61fd91b8d37e94a65af986260af4ec5dc54e23b1640966130000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduminor cleanup of 3D IBL PDE and associated block jacobian ping test 2021-12-31 10:55:30 -0500a61fd91b8d37e94a65af986260af4ec5dc54e23bminor cleanup of 3D IBL PDE and associated block jacobian ping testedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cppeditsrc/pde/IBL/PDEIBLFourEqn3D.hedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppeditsrc/pde/IBL/PDEIBL3D.hedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Triangle_btest.cpptest/system/AnalyticSolve/AnalyticSolve3D_IBLFourEqn_StagnationFlow_LamiBL_Triangle_btest.cpptest/sandbox/Solve3D_Uncoupled_IBL_FlatPlate_Blasius_toy.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cpptest/sandbox/Solve3D_Uncoupled_IBLFourEqn_FlatPlate_Blasius_toy.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cppsrc/pde/IBL/IntegrandBoundaryTrace_ProjectToQauxi3D.hsrc/Discretization/DG/AlgebraicEquationSet_TransitionIBL.htest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cpptest/system/AnalyticSolve/AnalyticSolve_IBL3D_StagnationFlow_LamiBL_Triangle_btest.cppsrc/Discretization/Galerkin/IntegrandBoundaryTrace_None_Galerkin_manifold3D.hsrc/Discretization/Galerkin/IntegrandBoundaryTrace_None_Galerkin_manifold2D.hsrc/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_CutcellTransitionIBL.hsrc/Discretization/Galerkin/IntegrandBoundaryTrace_None_Galerkin_manifold_IBL3D.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi3D.htest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cpptest/sandbox/Solve3D_Uncoupled_IBLFourEqn_FlatPlate_StagnationRadial_toy.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Triangle_btest.cppsrc/Discretization/DG/AlgebraicEquationSet_DGBR2_impl.hsrc/Discretization/Galerkin/IntegrandBoundaryTrace_None_Galerkin_manifold.htest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cppsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective_impl.h2114ea80ee5a190b4700e14f8b4405c866046fcc1640972214000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduRemoved the dedicated (yet redundant) boundary trace integrand for 3D auxi; instead, use 3D manifold BCNone integrand. Renamed 2D/3D BCNone integrands to reflect its general purpose, not limited to IBL PDE 2021-12-31 12:36:54 -05002114ea80ee5a190b4700e14f8b4405c866046fccRemoved the dedicated (yet redundant) boundary trace integrand for 3D auxi; instead, use 3D manifold BCNone integrand. Renamed 2D/3D BCNone integrands to reflect its general purpose, not limited to IBL PDEedittest/sandbox/Solve3D_Uncoupled_IBLFourEqn_FlatPlate_StagnationRadial_toy.cppdeletesrc/pde/IBL/IntegrandBoundaryTrace_ProjectToQauxi3D.hdeletesrc/Discretization/Galerkin/IntegrandBoundaryTrace_None_Galerkin_manifold.hedittest/system/AnalyticSolve/AnalyticSolve_IBL3D_StagnationFlow_LamiBL_Triangle_btest.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Triangle_btest.cppedittest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cppeditsrc/Discretization/DG/AlgebraicEquationSet_TransitionIBL.hedittest/sandbox/Solve3D_Uncoupled_IBLFourEqn_FlatPlate_Blasius_toy.cppedittest/sandbox/Solve3D_Uncoupled_IBL_FlatPlate_Blasius_toy.cppaddsrc/Discretization/Galerkin/IntegrandBoundaryTrace_None_Galerkin_manifold2D.hedittest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppeditsrc/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_CutcellTransitionIBL.hedittest/system/AnalyticSolve/AnalyticSolve3D_IBLFourEqn_StagnationFlow_LamiBL_Triangle_btest.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cppeditsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective_impl.hdeletesrc/Discretization/Galerkin/IntegrandBoundaryTrace_None_Galerkin_manifold_IBL3D.haddsrc/Discretization/Galerkin/IntegrandBoundaryTrace_None_Galerkin_manifold3D.heditsrc/Discretization/DG/AlgebraicEquationSet_DGBR2_impl.heditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi3D.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi3D.hsrc/Discretization/VMSD/AlgebraicEquationSet_VMSD_Linear.hsrc/Discretization/DG/AlgebraicEquationSet_TransitionIBL.hsrc/Discretization/DG/AlgebraicEquationSet_DGBR2_impl.hsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin.hsrc/SolutionTrek/TimeMarching/AlgebraicEquationSet_TimeStep.hsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective_impl.hsrc/Discretization/VMSD/AlgebraicEquationSet_VMSD.ha32d0cd789ea520a89ea17e9019fe0e6cca2e7671640972385000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edurefactored/fixed Surreal type definitions to use proper/general size variable 2021-12-31 12:39:45 -0500a32d0cd789ea520a89ea17e9019fe0e6cca2e767refactored/fixed Surreal type definitions to use proper/general size variableeditsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective_impl.heditsrc/SolutionTrek/TimeMarching/AlgebraicEquationSet_TimeStep.heditsrc/Discretization/DG/AlgebraicEquationSet_TransitionIBL.heditsrc/Discretization/VMSD/AlgebraicEquationSet_VMSD.heditsrc/Discretization/DG/AlgebraicEquationSet_DGBR2_impl.heditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi3D.heditsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin.heditsrc/Discretization/VMSD/AlgebraicEquationSet_VMSD_Linear.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi3D.he974b8d2a29d8a452632142b643c236598289f1c1640972438000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduaccidentally forgot these pieces two commits earlier, when updating auxi BCNone integrand 2021-12-31 12:40:38 -0500e974b8d2a29d8a452632142b643c236598289f1caccidentally forgot these pieces two commits earlier, when updating auxi BCNone integrandeditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi3D.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi3D.hsrc/Discretization/Galerkin/IntegrandBoundaryTrace_None_Galerkin_manifold2D.h8721c1082e49c90bc777d67b4f3e6a582bf743e51640987771000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edufixed some compile errors for auxi equation and boundary integrand 2021-12-31 16:56:11 -05008721c1082e49c90bc777d67b4f3e6a582bf743e5fixed some compile errors for auxi equation and boundary integrandeditsrc/Discretization/Galerkin/IntegrandBoundaryTrace_None_Galerkin_manifold2D.heditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi3D.hsrc/Discretization/Galerkin/IntegrandInteriorTrace_Galerkin_manifold2D.hsrc/Discretization/Galerkin/IntegrandInteriorTrace_Galerkin_manifold3D.h7b17cca84c35b379118342dfa474c6cd2f877a691640989022000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduminor integrand cleanup 2021-12-31 17:17:02 -05007b17cca84c35b379118342dfa474c6cd2f877a69minor integrand cleanupeditsrc/Discretization/Galerkin/IntegrandInteriorTrace_Galerkin_manifold3D.heditsrc/Discretization/Galerkin/IntegrandInteriorTrace_Galerkin_manifold2D.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi3D.hsrc/pde/IBL/IntegrandCell_ProjectToQauxi3D.hsrc/pde/IBL/IntegrandCell_ProjectToQauxi.hf0145dd22a80cd9087416964e9898521019110821640989266000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edurefactored auxi equation's cell integrand to be PhysDim-agnostic, in prep for generalization of auxi aes class 2021-12-31 17:21:06 -0500f0145dd22a80cd9087416964e989852101911082refactored auxi equation's cell integrand to be PhysDim-agnostic, in prep for generalization of auxi aes classeditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi3D.haddsrc/pde/IBL/IntegrandCell_ProjectToQauxi.hdeletesrc/pde/IBL/IntegrandCell_ProjectToQauxi3D.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi3D.htest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cppsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi.htest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Triangle_btest.cpptest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cpp696a2520821c797a917acea6a2b5b7f8013739a31640989670000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduRenamed auxi aes class to be not 3D specific, in prep for generalization 2021-12-31 17:27:50 -0500696a2520821c797a917acea6a2b5b7f8013739a3Renamed auxi aes class to be not 3D specific, in prep for generalizationdeletesrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi3D.hedittest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cppaddsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi.hedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cppedittest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Triangle_btest.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppsrc/Field/Element/ElementXField_LocalAxesManager.hsrc/pde/IBL/IntegrandCell_ProjectToQauxi.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi.hsrc/Discretization/DG/AlgebraicEquationSet_DGBR2_impl.hsrc/Discretization/DG/AlgebraicEquationSet_TransitionIBL.hsrc/Discretization/Galerkin/IntegrandBoundaryTrace_None_Galerkin_manifold.hsrc/Discretization/Galerkin/IntegrandBoundaryTrace_None_Galerkin_manifold3D.hsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective_impl.hsrc/Discretization/Galerkin/IntegrandBoundaryTrace_None_Galerkin_manifold2D.hee749513c600a71798ff31626dfe36c16750074c1640992467000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduRefactored BCNone integrand for Galerkin manifold to be agnostic of PhysDim 2021-12-31 18:14:27 -0500ee749513c600a71798ff31626dfe36c16750074cRefactored BCNone integrand for Galerkin manifold to be agnostic of PhysDimdeletesrc/Discretization/Galerkin/IntegrandBoundaryTrace_None_Galerkin_manifold3D.heditsrc/Discretization/DG/AlgebraicEquationSet_DGBR2_impl.heditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi.hdeletesrc/Discretization/Galerkin/IntegrandBoundaryTrace_None_Galerkin_manifold2D.heditsrc/pde/IBL/IntegrandCell_ProjectToQauxi.haddsrc/Field/Element/ElementXField_LocalAxesManager.heditsrc/Discretization/DG/AlgebraicEquationSet_TransitionIBL.haddsrc/Discretization/Galerkin/IntegrandBoundaryTrace_None_Galerkin_manifold.heditsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective_impl.htest/sandbox/Solve3D_Uncoupled_IBL_FlatPlate_Blasius_toy.cppsrc/Discretization/Galerkin/IntegrandBoundaryTrace_Flux_mitState_Galerkin_manifold_IBL3D.htest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cpptest/sandbox/Solve3D_Uncoupled_IBLFourEqn_FlatPlate_Blasius_toy.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cppsrc/Discretization/Galerkin/IntegrandBoundaryTrace_Dirichlet_mitLG_Galerkin_manifold.htest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppsrc/Discretization/Galerkin/IntegrandBoundaryTrace_Flux_mitState_Galerkin_manifold.htest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cppsrc/Discretization/Galerkin/IntegrandBoundaryTrace_mitLG_Galerkin_manifold_IBL3D.htest/sandbox/Solve3D_Uncoupled_IBLFourEqn_FlatPlate_StagnationRadial_toy.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Triangle_btest.cppsrc/Discretization/Galerkin/IntegrandBoundaryTrace_None_Galerkin_manifold.htest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cppsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective_impl.h0bf8e884482def3945d5fdbb7158c9f3a753a8d31640995133000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edufixed/refactored a few Galerkin_manifold boundary integands to be agnostic of PhysDim 2021-12-31 18:58:53 -05000bf8e884482def3945d5fdbb7158c9f3a753a8d3fixed/refactored a few Galerkin_manifold boundary integands to be agnostic of PhysDimeditsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective_impl.hedittest/sandbox/Solve3D_Uncoupled_IBLFourEqn_FlatPlate_StagnationRadial_toy.cppaddsrc/Discretization/Galerkin/IntegrandBoundaryTrace_Dirichlet_mitLG_Galerkin_manifold.hedittest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cppeditsrc/Discretization/Galerkin/IntegrandBoundaryTrace_None_Galerkin_manifold.hedittest/sandbox/Solve3D_Uncoupled_IBL_FlatPlate_Blasius_toy.cppeditsrc/Discretization/Galerkin/IntegrandBoundaryTrace_Flux_mitState_Galerkin_manifold.hedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Triangle_btest.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cppdeletesrc/Discretization/Galerkin/IntegrandBoundaryTrace_Flux_mitState_Galerkin_manifold_IBL3D.hdeletesrc/Discretization/Galerkin/IntegrandBoundaryTrace_mitLG_Galerkin_manifold_IBL3D.hedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cppedittest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cppedittest/sandbox/Solve3D_Uncoupled_IBLFourEqn_FlatPlate_Blasius_toy.cpptest/unit/Adaptation/MOESS/NodalMetrics_btest.cppsrc/Adaptation/MOESS/NodalMetrics/NodalMetrics_impl.heb5e0c424b2072ef66df9961cb886185dde263421641124668000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduUse isotropic implied metric for IsotropicOpt MOESS 2022-01-02 06:57:48 -0500eb5e0c424b2072ef66df9961cb886185dde26342Use isotropic implied metric for IsotropicOpt MOESSedittest/unit/Adaptation/MOESS/NodalMetrics_btest.cppeditsrc/Adaptation/MOESS/NodalMetrics/NodalMetrics_impl.hsrc/Field/Element/ElementXField_LocalAxesManager.hsrc/PanelMethod/AlgebraicEquationSet_ProjectToQauxi.hsrc/Discretization/Galerkin/IntegrandInteriorTrace_Galerkin_manifold2D.hsrc/Discretization/Galerkin/IntegrandInteriorTrace_Galerkin_manifold.hsrc/Discretization/Galerkin/IntegrandInteriorTrace_Galerkin_manifold3D.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi.hsrc/Discretization/DG/AlgebraicEquationSet_TransitionIBL.hsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective.h732c3a6b71ca64aff76456262fa137eb1208a3691641142252000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edurefactored Galerkin_manifold interior trace integrands to be agnostic of PhysDim 2022-01-02 11:50:52 -0500732c3a6b71ca64aff76456262fa137eb1208a369refactored Galerkin_manifold interior trace integrands to be agnostic of PhysDimdeletesrc/Discretization/Galerkin/IntegrandInteriorTrace_Galerkin_manifold3D.heditsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective.heditsrc/Field/Element/ElementXField_LocalAxesManager.haddsrc/Discretization/Galerkin/IntegrandInteriorTrace_Galerkin_manifold.heditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi.heditsrc/PanelMethod/AlgebraicEquationSet_ProjectToQauxi.hdeletesrc/Discretization/Galerkin/IntegrandInteriorTrace_Galerkin_manifold2D.heditsrc/Discretization/DG/AlgebraicEquationSet_TransitionIBL.hsrc/Discretization/JacobianParam.hsrc/Discretization/JacobianParam_impl.hdcb6be3fb9e1af105eed3f67da96ddf23c448ba01641154780000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduremoved daisy chain in JacobianParam since it could be handled by the primary algebraic equation class's jacobianParam(...) 2022-01-02 15:19:40 -0500dcb6be3fb9e1af105eed3f67da96ddf23c448ba0removed daisy chain in JacobianParam since it could be handled by the primary algebraic equation class's jacobianParam(...)editsrc/Discretization/JacobianParam.heditsrc/Discretization/JacobianParam_impl.hsrc/Discretization/Galerkin/IntegrandInteriorTrace_Galerkin_manifold.h6d2b48036cfd92b718bc36cc926c9e868c1dbf461641154796000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduremoved 3D-specific assertion 2022-01-02 15:19:56 -05006d2b48036cfd92b718bc36cc926c9e868c1dbf46removed 3D-specific assertioneditsrc/Discretization/Galerkin/IntegrandInteriorTrace_Galerkin_manifold.hsrc/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_impl.hsrc/Discretization/VMSDBR2/AlgebraicEquationSet_VMSD_BR2.hsrc/Discretization/VMSD/AlgebraicEquationSet_VMSD_Linear.hsrc/Discretization/DG/AlgebraicEquationSet_TransitionIBL.hsrc/Discretization/DG/AlgebraicEquationSet_DGBR2_impl.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D.hsrc/SolutionTrek/TimeMarching/AlgebraicEquationSet_TimeStep.hsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_Stabilized_LiftedBoundary.hsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective.hsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective_impl.hsrc/Discretization/VMSD/AlgebraicEquationSet_VMSD.hsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_BCDataField.h276fb93ef153e75db4847f373bbbf2870ce7e70f1641155524000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edurefactored usage of jacobianParam(...) to account for any daisy chain in the primary algebraic equation set 2022-01-02 15:32:04 -0500276fb93ef153e75db4847f373bbbf2870ce7e70frefactored usage of jacobianParam(...) to account for any daisy chain in the primary algebraic equation seteditsrc/Discretization/VMSD/AlgebraicEquationSet_VMSD_Linear.heditsrc/Discretization/DG/AlgebraicEquationSet_TransitionIBL.heditsrc/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_impl.heditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D.heditsrc/SolutionTrek/TimeMarching/AlgebraicEquationSet_TimeStep.heditsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective_impl.heditsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective.heditsrc/Discretization/DG/AlgebraicEquationSet_DGBR2_impl.heditsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_BCDataField.heditsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_Stabilized_LiftedBoundary.heditsrc/Discretization/VMSD/AlgebraicEquationSet_VMSD.heditsrc/Discretization/VMSDBR2/AlgebraicEquationSet_VMSD_BR2.hsrc/Discretization/Galerkin/AlgebraicEquationSet_Project.hsrc/Discretization/DG/AlgebraicEquationSet_DGBR2.hsrc/Discretization/VMSDBR2/AlgebraicEquationSet_VMSD_BR2.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi.hsrc/Discretization/HDG/AlgebraicEquationSet_HDGAdvective.hsrc/Discretization/DG/AlgebraicEquationSet_TransitionIBL.hsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_Stabilized_LiftedBoundary.hsrc/Discretization/JacobianParam_impl.hsrc/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_impl.hsrc/Discretization/VMSD/AlgebraicEquationSet_VMSD_Linear.hsrc/Discretization/DG/AlgebraicEquationSet_DGBR2_impl.hsrc/SolutionTrek/TimeMarching/AlgebraicEquationSet_TimeStep.hsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective.hsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective_impl.hsrc/Discretization/VMSD/AlgebraicEquationSet_VMSD.h61c635bfe61ccbe4a2358d2eaee47973f549a8221641172864000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduRefactored daisy-chain/linked list implementation of algebraic equation sets, including auxi equation and proper chained calls to jacobianParam() 2022-01-02 20:21:04 -050061c635bfe61ccbe4a2358d2eaee47973f549a822Refactored daisy-chain/linked list implementation of algebraic equation sets, including auxi equation and proper chained calls to jacobianParam()editsrc/Discretization/DG/AlgebraicEquationSet_DGBR2.heditsrc/SolutionTrek/TimeMarching/AlgebraicEquationSet_TimeStep.heditsrc/Discretization/DG/AlgebraicEquationSet_DGBR2_impl.heditsrc/Discretization/DG/AlgebraicEquationSet_TransitionIBL.heditsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective_impl.heditsrc/Discretization/Galerkin/AlgebraicEquationSet_Project.heditsrc/Discretization/JacobianParam_impl.heditsrc/Discretization/VMSDBR2/AlgebraicEquationSet_VMSD_BR2.heditsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective.heditsrc/Discretization/HDG/AlgebraicEquationSet_HDGAdvective.heditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi.heditsrc/Discretization/VMSD/AlgebraicEquationSet_VMSD_Linear.heditsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_Stabilized_LiftedBoundary.heditsrc/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_impl.heditsrc/Discretization/VMSD/AlgebraicEquationSet_VMSD.hsrc/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_CutcellTransitionIBL.htest/unit/Discretization/DG/AlgebraicEquationSet_DGBR2_Triangle_AD_btest.cpptest/unit/Discretization/DG/AlgebraicEquationSet_DGAdvective_Triangle_AD_btest.cppsrc/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_impl.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi.hsrc/Discretization/DG/AlgebraicEquationSet_TransitionIBL.hsrc/Discretization/DG/AlgebraicEquationSet_DGBR2_impl.hsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective.hsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective_impl.h6ee0c0c0705323150df2b9a2b5619ff541c732041641174204000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduremoved redundant daisy-chained calls to setSolutionField() and fillSystemVector() in algebraic equation sets. Clarified the intended use case of daisy-chained equation set 2022-01-02 20:43:24 -05006ee0c0c0705323150df2b9a2b5619ff541c73204removed redundant daisy-chained calls to setSolutionField() and fillSystemVector() in algebraic equation sets. Clarified the intended use case of daisy-chained equation setedittest/unit/Discretization/DG/AlgebraicEquationSet_DGAdvective_Triangle_AD_btest.cppeditsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective.heditsrc/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_impl.hedittest/unit/Discretization/DG/AlgebraicEquationSet_DGBR2_Triangle_AD_btest.cppeditsrc/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_CutcellTransitionIBL.heditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi.heditsrc/Discretization/DG/AlgebraicEquationSet_TransitionIBL.heditsrc/Discretization/DG/AlgebraicEquationSet_DGBR2_impl.heditsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective_impl.htest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellNaturalTransitionIBLUniField_Panel_btest_outdated.cpptest/sandbox/Solve2D_Coupled4x4_IBLSplitAmpLag_CorrelationClosure_CapturedTransition_PTC_toy.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_HDGAdvIBL_Panel_btest.cppsrc/PanelMethod/ProjectionToQauxi_IBL.htest/system/CodeConsistency/Solve2D_Coupled4x4_IBL_Panel_NACA0004_FittedTransition_TwoLayerNewton_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_HubtraceHDGAdvIBL_CutCellNaturalTransition_Panel_btest.cpptest/sandbox/Solve2D_Coupled4x4_IBL_fx67k170_toy.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_IBL_Panel_btest.cpptest/unit/PanelMethod/ProjectionToQauxi_IBL_btest.cpptest/sandbox/Solve2D_Coupled4x4_IBL_fx67k170_drag_polar_toy.cppsrc/PanelMethod/IntegrandBoundaryTrace_ProjectToQauxi.htest/unit/pde/IBL/ProjectToQauxi2D_btest.cppsrc/PanelMethod/AlgebraicEquationSet_ProjectToQauxi.htest/system/CodeConsistency/Solve2D_Coupled4x4_IBLSplitAmpLag_CorrelationClosure_CapturedTransition_PTC_btest.cppsrc/pde/IBL/ProjectToQauxi3D.htest/unit/pde/IBL/ProjectToQauxi_IBL3D_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellNaturalTransitionIBL_Panel_btest.cppsrc/pde/IBL/ProjectToQauxi2D.htest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellForcedTransitionIBL_Panel_btest.cpptest/unit/pde/IBL/ProjectToQauxi3D_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellForcedTransitionIBLUniField_Panel_btest_outdated.cppf14ab1488408e21b4a3a6591dd853a9bd6f9f3541641184252000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduRefactored 2D auxi PDE class to prepare panel-IBL2 to use the PhysDim-agnostic auxi equation implementation. Removed redundant auxi equation set and integrand classes that used to be specialized for Panel2D 2022-01-02 23:30:52 -0500f14ab1488408e21b4a3a6591dd853a9bd6f9f354Refactored 2D auxi PDE class to prepare panel-IBL2 to use the PhysDim-agnostic auxi equation implementation. Removed redundant auxi equation set and integrand classes that used to be specialized for Panel2Daddtest/unit/pde/IBL/ProjectToQauxi3D_btest.cppdeletesrc/PanelMethod/ProjectionToQauxi_IBL.hdeletesrc/PanelMethod/IntegrandBoundaryTrace_ProjectToQauxi.hedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellForcedTransitionIBL_Panel_btest.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellNaturalTransitionIBL_Panel_btest.cppaddsrc/pde/IBL/ProjectToQauxi2D.hedittest/system/CodeConsistency/Solve2D_Coupled4x4_IBLSplitAmpLag_CorrelationClosure_CapturedTransition_PTC_btest.cppdeletetest/unit/PanelMethod/ProjectionToQauxi_IBL_btest.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellForcedTransitionIBLUniField_Panel_btest_outdated.cppeditsrc/pde/IBL/ProjectToQauxi3D.hdeletetest/unit/pde/IBL/ProjectToQauxi_IBL3D_btest.cppedittest/sandbox/Solve2D_Coupled4x4_IBL_fx67k170_toy.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_HDGAdvIBL_Panel_btest.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellNaturalTransitionIBLUniField_Panel_btest_outdated.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_HubtraceHDGAdvIBL_CutCellNaturalTransition_Panel_btest.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_IBL_Panel_btest.cppedittest/sandbox/Solve2D_Coupled4x4_IBLSplitAmpLag_CorrelationClosure_CapturedTransition_PTC_toy.cppedittest/sandbox/Solve2D_Coupled4x4_IBL_fx67k170_drag_polar_toy.cppdeletesrc/PanelMethod/AlgebraicEquationSet_ProjectToQauxi.haddtest/unit/pde/IBL/ProjectToQauxi2D_btest.cppedittest/system/CodeConsistency/Solve2D_Coupled4x4_IBL_Panel_NACA0004_FittedTransition_TwoLayerNewton_btest.cppsrc/pde/NDConvert/PDENDConvertSpace2D.htest/system/CodeConsistency/Solve2D_Coupled4x4_IBLSplitAmpLag_CorrelationClosure_CapturedTransition_PTC_btest.cppsrc/pde/IBL/PDEIBLSplitAmpLag2D.hsrc/pde/IBL/IntegrandCell_ProjectToQauxi.hsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective_impl.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi.hc6b27bf74956ee38605de10b1523f556591281e31641243331000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduRemoved 3D-specific assertion in auxi cell integrand. Fixed IBL2 captured transition system test case 2022-01-03 15:55:31 -0500c6b27bf74956ee38605de10b1523f556591281e3Removed 3D-specific assertion in auxi cell integrand. Fixed IBL2 captured transition system test caseedittest/system/CodeConsistency/Solve2D_Coupled4x4_IBLSplitAmpLag_CorrelationClosure_CapturedTransition_PTC_btest.cppeditsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective_impl.heditsrc/pde/IBL/PDEIBLSplitAmpLag2D.heditsrc/pde/NDConvert/PDENDConvertSpace2D.heditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi.heditsrc/pde/IBL/IntegrandCell_ProjectToQauxi.htest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellNaturalTransitionIBLUniField_Panel_btest_outdated.cpptest/sandbox/Solve2D_Coupled4x4_IBLSplitAmpLag_CorrelationClosure_CapturedTransition_PTC_toy.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_HDGAdvIBL_Panel_btest.cpptest/system/CodeConsistency/Solve2D_Coupled4x4_IBL_Panel_NACA0004_FittedTransition_TwoLayerNewton_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_HubtraceHDGAdvIBL_CutCellNaturalTransition_Panel_btest.cpptest/sandbox/Solve2D_Coupled4x4_IBL_fx67k170_toy.cppsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PanelMethod.htest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_IBL_Panel_btest.cpptest/sandbox/Solve2D_Coupled4x4_IBL_fx67k170_drag_polar_toy.cppsrc/PanelMethod/FunctionEvalQauxv_IBL2D_XfoilPanel.hsrc/PanelMethod/FunctionEvalQauxv_IBL.htest/system/CodeConsistency/Solve2D_Coupled4x4_IBLSplitAmpLag_CorrelationClosure_CapturedTransition_PTC_btest.cppsrc/Discretization/Galerkin/IntegrandCell_ProjectFunction.htest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellNaturalTransitionIBL_Panel_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellForcedTransitionIBL_Panel_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellForcedTransitionIBLUniField_Panel_btest_outdated.cppsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_XfoilPanel.he9bd28c76e40c80de791c9cf86ae4a9cb38f7b671641248197000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduCleaned up auxi equation implementation to remove redundant dummy members in FunctionEval class. Renamed some files & classes 2022-01-03 17:16:37 -0500e9bd28c76e40c80de791c9cf86ae4a9cb38f7b67Cleaned up auxi equation implementation to remove redundant dummy members in FunctionEval class. Renamed some files & classesedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_HubtraceHDGAdvIBL_CutCellNaturalTransition_Panel_btest.cppdeletesrc/PanelMethod/FunctionEvalQauxv_IBL.hdeletesrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PanelMethod.hedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellNaturalTransitionIBL_Panel_btest.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellNaturalTransitionIBLUniField_Panel_btest_outdated.cppaddsrc/PanelMethod/FunctionEvalQauxv_IBL2D_XfoilPanel.hedittest/system/CodeConsistency/Solve2D_Coupled4x4_IBLSplitAmpLag_CorrelationClosure_CapturedTransition_PTC_btest.cppeditsrc/Discretization/Galerkin/IntegrandCell_ProjectFunction.hedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellForcedTransitionIBL_Panel_btest.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_IBL_Panel_btest.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_HDGAdvIBL_Panel_btest.cppedittest/sandbox/Solve2D_Coupled4x4_IBLSplitAmpLag_CorrelationClosure_CapturedTransition_PTC_toy.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellForcedTransitionIBLUniField_Panel_btest_outdated.cppaddsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_XfoilPanel.hedittest/sandbox/Solve2D_Coupled4x4_IBL_fx67k170_toy.cppedittest/sandbox/Solve2D_Coupled4x4_IBL_fx67k170_drag_polar_toy.cppedittest/system/CodeConsistency/Solve2D_Coupled4x4_IBL_Panel_NACA0004_FittedTransition_TwoLayerNewton_btest.cppsrc/PanelMethod/FunctionEvalQauxv_IBL2D_XfoilPanel.h8c1cf3d514a69efca60f0c6b6b26dc56c3f7ddf41641249644000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.educannot assign a regular/raw pointer to std::shared_ptr 2022-01-03 17:40:44 -05008c1cf3d514a69efca60f0c6b6b26dc56c3f7ddf4cannot assign a regular/raw pointer to std::shared_ptreditsrc/PanelMethod/FunctionEvalQauxv_IBL2D_XfoilPanel.htest/sandbox/Solve2D_Coupled4x4_IBLSplitAmpLag_CorrelationClosure_CapturedTransition_PTC_toy.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellNaturalTransitionIBLUniField_Panel_btest_outdated.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_HDGAdvIBL_Panel_btest.cpptest/system/CodeConsistency/Solve2D_Coupled4x4_IBL_Panel_NACA0004_FittedTransition_TwoLayerNewton_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_HubtraceHDGAdvIBL_CutCellNaturalTransition_Panel_btest.cpptest/sandbox/Solve2D_Coupled4x4_IBL_fx67k170_toy.cppsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PanelMethod.htest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_IBL_Panel_btest.cpptest/sandbox/Solve2D_Coupled4x4_IBL_fx67k170_drag_polar_toy.cppsrc/PanelMethod/FunctionEvalQauxv_IBL2D_XfoilPanel.hsrc/PanelMethod/FunctionEvalQauxv_IBL.htest/system/CodeConsistency/Solve2D_Coupled4x4_IBLSplitAmpLag_CorrelationClosure_CapturedTransition_PTC_btest.cppsrc/Discretization/Galerkin/IntegrandCell_ProjectFunction.htest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellNaturalTransitionIBL_Panel_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellForcedTransitionIBL_Panel_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellForcedTransitionIBLUniField_Panel_btest_outdated.cppsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_XfoilPanel.hd043aeb83df8daaa55b257428def76249c46d5ee1641251400000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduCleaned up 2D auxv equation implementation for XfoilPanel+IBL to remove redundant dummy members in FunctionEval class. Renamed some files & classes 2022-01-03 18:10:00 -0500d043aeb83df8daaa55b257428def76249c46d5eeCleaned up 2D auxv equation implementation for XfoilPanel+IBL to remove redundant dummy members in FunctionEval class. Renamed some files & classesedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellNaturalTransitionIBL_Panel_btest.cppedittest/system/CodeConsistency/Solve2D_Coupled4x4_IBLSplitAmpLag_CorrelationClosure_CapturedTransition_PTC_btest.cppedittest/sandbox/Solve2D_Coupled4x4_IBLSplitAmpLag_CorrelationClosure_CapturedTransition_PTC_toy.cppdeletesrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PanelMethod.hedittest/sandbox/Solve2D_Coupled4x4_IBL_fx67k170_drag_polar_toy.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellForcedTransitionIBL_Panel_btest.cppaddsrc/PanelMethod/FunctionEvalQauxv_IBL2D_XfoilPanel.hedittest/system/CodeConsistency/Solve2D_Coupled4x4_IBL_Panel_NACA0004_FittedTransition_TwoLayerNewton_btest.cppeditsrc/Discretization/Galerkin/IntegrandCell_ProjectFunction.hedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellNaturalTransitionIBLUniField_Panel_btest_outdated.cppedittest/sandbox/Solve2D_Coupled4x4_IBL_fx67k170_toy.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellForcedTransitionIBLUniField_Panel_btest_outdated.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_HDGAdvIBL_Panel_btest.cppdeletesrc/PanelMethod/FunctionEvalQauxv_IBL.haddsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_XfoilPanel.hedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_HubtraceHDGAdvIBL_CutCellNaturalTransition_Panel_btest.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_IBL_Panel_btest.cppsrc/PanelMethod/FunctionEvalQauxv_IBL2D_XfoilPanel.haab273d3ca08140facca8e29a5eb49c54af4ceba1641251489000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.educannot assign regular/raw pointer to std::shared_ptr 2022-01-03 18:11:29 -0500aab273d3ca08140facca8e29a5eb49c54af4cebacannot assign regular/raw pointer to std::shared_ptreditsrc/PanelMethod/FunctionEvalQauxv_IBL2D_XfoilPanel.htest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Triangle_btest.cppsrc/PanelMethod/FunctionEvalQauxv_IBL_PiecewiseConstSourcePanel_FlatPlate3D.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PiecewiseConstSourcePanel_FlatPlate3D.htest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cpp523e492c9617ee683874b1bbf5815a7286c36e551641251630000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduCleaned up 3D auxv equation implementation for flat plate panel+IBL3 to remove redundant dummy members in FunctionEval class 2022-01-03 18:13:50 -0500523e492c9617ee683874b1bbf5815a7286c36e55Cleaned up 3D auxv equation implementation for flat plate panel+IBL3 to remove redundant dummy members in FunctionEval classedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cppedittest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Triangle_btest.cppeditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PiecewiseConstSourcePanel_FlatPlate3D.heditsrc/PanelMethod/FunctionEvalQauxv_IBL_PiecewiseConstSourcePanel_FlatPlate3D.hedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cppsrc/PanelMethod/XfoilPanelEquationSet.h3e078ea9ca75aacff6d6632f982b587afea110631641251923000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduminor refactoring of XfoilPanel field discretization order checks/assertions 2022-01-03 18:18:43 -05003e078ea9ca75aacff6d6632f982b587afea11063minor refactoring of XfoilPanel field discretization order checks/assertionseditsrc/PanelMethod/XfoilPanelEquationSet.hsrc/pde/IBL/PDEIBL2D.h37b3b686967ac6e16f73de48da750d0a2e3c76ae1641252002000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edurefactoring (similar to previous ones) to have PDEIBL2D define its parameter field tuple types 2022-01-03 18:20:02 -050037b3b686967ac6e16f73de48da750d0a2e3c76aerefactoring (similar to previous ones) to have PDEIBL2D define its parameter field tuple typeseditsrc/pde/IBL/PDEIBL2D.hsrc/PanelMethod/XfoilPanelEquationSet.h223a8a2cc796e62647d1f7f32bb5960aeca5dc1e1641275038000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edutypo fix 2022-01-04 00:43:58 -0500223a8a2cc796e62647d1f7f32bb5960aeca5dc1etypo fixeditsrc/PanelMethod/XfoilPanelEquationSet.hsrc/NonLinearSolver/NewtonSolver_impl.htest/sandbox/Solve2D_Coupled4x4_IBL_fx67k170_drag_polar_toy.cpptest/system/CodeConsistency/Solve2D_Coupled4x4_IBLSplitAmpLag_CorrelationClosure_CapturedTransition_PTC_btest.cpptest/system/CodeConsistency/Solve2D_Uncoupled_DGAdvectiveIBL_LamiBL_PTC_btest.cpptest/system/CodeConsistency/Solve2D_Uncoupled_HDGAdvectiveIBL_LamiBL_btest.cpp4d9325724fcce214b7089a83789db5ef7524c5c51641275730000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduonly prints in verbose mode 2022-01-04 00:55:30 -05004d9325724fcce214b7089a83789db5ef7524c5c5only prints in verbose modeeditsrc/NonLinearSolver/NewtonSolver_impl.hedittest/system/CodeConsistency/Solve2D_Uncoupled_DGAdvectiveIBL_LamiBL_PTC_btest.cppedittest/system/CodeConsistency/Solve2D_Uncoupled_HDGAdvectiveIBL_LamiBL_btest.cppedittest/sandbox/Solve2D_Coupled4x4_IBL_fx67k170_drag_polar_toy.cppedittest/system/CodeConsistency/Solve2D_Coupled4x4_IBLSplitAmpLag_CorrelationClosure_CapturedTransition_PTC_btest.cpptest/system/CodeConsistency/Solve2D_Coupled4x4_IBLSplitAmpLag_CorrelationClosure_CapturedTransition_PTC_btest.cpptest/system/CodeConsistency/Solve2D_Coupled4x4_IBL_Panel_NACA0004_FittedTransition_TwoLayerNewton_btest.cpptest/system/CodeConsistency/Solve2D_Uncoupled_DGAdvectiveIBL_LamiBL_PTC_btest.cpptest/system/CodeConsistency/Solve2D_Uncoupled_DGAdvectiveIBLUniField_CorrelationClosure_LamiBL_btest.cpptest/system/CodeConsistency/Solve2D_Uncoupled_HDGAdvectiveIBL_LamiBL_btest.cpp3c1aeec79b400563a849dbe48616cad3547d9f6b1641278091000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edufixed system/CodeConsistency tests for IBL 2022-01-04 01:34:51 -05003c1aeec79b400563a849dbe48616cad3547d9f6bfixed system/CodeConsistency tests for IBLedittest/system/CodeConsistency/Solve2D_Uncoupled_DGAdvectiveIBL_LamiBL_PTC_btest.cppedittest/system/CodeConsistency/Solve2D_Coupled4x4_IBLSplitAmpLag_CorrelationClosure_CapturedTransition_PTC_btest.cppedittest/system/CodeConsistency/Solve2D_Uncoupled_HDGAdvectiveIBL_LamiBL_btest.cppedittest/system/CodeConsistency/Solve2D_Uncoupled_DGAdvectiveIBLUniField_CorrelationClosure_LamiBL_btest.cppedittest/system/CodeConsistency/Solve2D_Coupled4x4_IBL_Panel_NACA0004_FittedTransition_TwoLayerNewton_btest.cpptest/system/CodeConsistency/Solve2D_Coupled4x4_IBL_Panel_NACA0004_FittedTransition_TwoLayerNewton_btest.cppsrc/Discretization/Galerkin/AlgebraicEquationSet_HubTrace_Galerkin.hsrc/Discretization/HDG/AlgebraicEquationSet_HDGAdvective.hsrc/Discretization/DG/AlgebraicEquationSet_TransitionIBL.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PiecewiseConstSourcePanel_FlatPlate3D.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D.htest/system/AnalyticSolve/AnalyticSolve_IBL3D_StagnationFlow_LamiBL_Triangle_btest.cppsrc/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_CutcellTransitionIBL.htest/system/AnalyticSolve/AnalyticSolve2D_DGAdvective_IBLSplitAmpLag_StagnationFlow_LamiBL_btest.cpptest/unit/PanelMethod/XfoilPanelEquationSet_btest.cpptest/system/Asymptotic/ErrorOrder_1D_HDGAdvective_Advection_btest.cppsrc/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_impl.hsrc/pde/IBL/PDEIBLUniField.htest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cppsrc/Discretization/Galerkin/AlgebraicEquationSet_HubTrace_Galerkin_cutCellTransitionIBL.hsrc/Discretization/HDG/AlgebraicEquationSet_Hubtrace_HDGAdvective.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_XfoilPanel.htest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cpptest/system/AnalyticSolve/AnalyticSolve2D_DGAdvective_IBL_StagnationFlow_SingleElem_LamiBL_btest.cppsrc/Discretization/HDG/AlgebraicEquationSet_Hubtrace_HDGAdvective_CutcellTransitionIBL.h2b8c649031481154b93945d751190df629cd94111641278369000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.educleanup and fixes to keep IBL-related implementation up to date 2022-01-04 01:39:29 -05002b8c649031481154b93945d751190df629cd9411cleanup and fixes to keep IBL-related implementation up to dateedittest/system/Asymptotic/ErrorOrder_1D_HDGAdvective_Advection_btest.cppedittest/system/AnalyticSolve/AnalyticSolve_IBL3D_StagnationFlow_LamiBL_Triangle_btest.cppedittest/system/AnalyticSolve/AnalyticSolve2D_DGAdvective_IBL_StagnationFlow_SingleElem_LamiBL_btest.cppeditsrc/Discretization/HDG/AlgebraicEquationSet_Hubtrace_HDGAdvective_CutcellTransitionIBL.heditsrc/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_impl.heditsrc/Discretization/HDG/AlgebraicEquationSet_HDGAdvective.heditsrc/Discretization/HDG/AlgebraicEquationSet_Hubtrace_HDGAdvective.heditsrc/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_CutcellTransitionIBL.heditsrc/Discretization/Galerkin/AlgebraicEquationSet_HubTrace_Galerkin.heditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_XfoilPanel.hedittest/system/AnalyticSolve/AnalyticSolve2D_DGAdvective_IBLSplitAmpLag_StagnationFlow_LamiBL_btest.cppedittest/system/CodeConsistency/Solve2D_Coupled4x4_IBL_Panel_NACA0004_FittedTransition_TwoLayerNewton_btest.cppedittest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cppeditsrc/pde/IBL/PDEIBLUniField.heditsrc/Discretization/DG/AlgebraicEquationSet_TransitionIBL.hedittest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cppeditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PiecewiseConstSourcePanel_FlatPlate3D.heditsrc/Discretization/Galerkin/AlgebraicEquationSet_HubTrace_Galerkin_cutCellTransitionIBL.hedittest/unit/PanelMethod/XfoilPanelEquationSet_btest.cppeditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D.htest/unit/Discretization/DG/AlgebraicEquationSet_DGAdvective_Line_IBL_airfoilOnly_btest.cpptest/unit/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_Advection_btest.cpptest/unit/Discretization/HDG/AlgebraicEquationSet_Hubtrace_HDGAdvective_IBL_btest.cpptest/unit/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_Line_IBL_airfoilOnly_btest.cpp247783399896cb640cc32df5572576678f6bca711641278822000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edumore cleanup on DG/HDG discretization unit tests, mostly related to IBL 2022-01-04 01:47:02 -0500247783399896cb640cc32df5572576678f6bca71more cleanup on DG/HDG discretization unit tests, mostly related to IBLedittest/unit/Discretization/HDG/AlgebraicEquationSet_Hubtrace_HDGAdvective_IBL_btest.cppedittest/unit/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_Advection_btest.cppedittest/unit/Discretization/DG/AlgebraicEquationSet_DGAdvective_Line_IBL_airfoilOnly_btest.cppedittest/unit/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_Line_IBL_airfoilOnly_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Triangle_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cpp09ccec314e0cb26b351badbbee2f71076505da081641279193000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.educleanup & fixes to panel-IBL3 3x3 block discretization unit tests to keep up to date with IBL-related implementation 2022-01-04 01:53:13 -050009ccec314e0cb26b351badbbee2f71076505da08cleanup & fixes to panel-IBL3 3x3 block discretization unit tests to keep up to date with IBL-related implementationedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Triangle_btest.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppc0095b7e73daefa0e16e9caeeb16f5c85ec255b51641279253000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduremoved redundant include 2022-01-04 01:54:13 -0500c0095b7e73daefa0e16e9caeeb16f5c85ec255b5removed redundant includeedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppsrc/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_CutcellTransitionIBL.htest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellNaturalTransitionIBLUniField_Panel_btest_outdated.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_HDGAdvIBL_Panel_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_HubtraceHDGAdvIBL_CutCellNaturalTransition_Panel_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellNaturalTransitionIBL_Panel_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellForcedTransitionIBL_Panel_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_IBL_Panel_btest.cppsrc/Discretization/HDG/AlgebraicEquationSet_HDGAdvective.htest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellForcedTransitionIBLUniField_Panel_btest_outdated.cppsrc/Discretization/HDG/AlgebraicEquationSet_Hubtrace_HDGAdvective.htest/unit/Discretization/HDG/AlgebraicEquationSet_Hubtrace_HDGAdvective_IBL_btest.cppsrc/Discretization/HDG/AlgebraicEquationSet_Hubtrace_HDGAdvective_CutcellTransitionIBL.h981d93227382e2c3982b9ce9af75dc94e29526f71641319382000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edufixed miscellaneous XfoilPanel+IBL2 aes unit tests to stay up to date with latest IBL implementation 2022-01-04 13:03:02 -0500981d93227382e2c3982b9ce9af75dc94e29526f7fixed miscellaneous XfoilPanel+IBL2 aes unit tests to stay up to date with latest IBL implementationdeletetest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellForcedTransitionIBLUniField_Panel_btest_outdated.cppeditsrc/Discretization/HDG/AlgebraicEquationSet_HDGAdvective.heditsrc/Discretization/HDG/AlgebraicEquationSet_Hubtrace_HDGAdvective.hedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellNaturalTransitionIBL_Panel_btest.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_HubtraceHDGAdvIBL_CutCellNaturalTransition_Panel_btest.cppedittest/unit/Discretization/HDG/AlgebraicEquationSet_Hubtrace_HDGAdvective_IBL_btest.cppeditsrc/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_CutcellTransitionIBL.heditsrc/Discretization/HDG/AlgebraicEquationSet_Hubtrace_HDGAdvective_CutcellTransitionIBL.hedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellForcedTransitionIBL_Panel_btest.cppdeletetest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellNaturalTransitionIBLUniField_Panel_btest_outdated.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_HDGAdvIBL_Panel_btest.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_IBL_Panel_btest.cpptest/sandbox/Solve2D_Coupled4x4_IBL_fx67k170_drag_polar_toy.cpptest/sandbox/Solve2D_Coupled4x4_IBLSplitAmpLag_CorrelationClosure_CapturedTransition_PTC_toy.cpptest/system/CodeConsistency/Solve2D_Coupled4x4_IBLSplitAmpLag_CorrelationClosure_CapturedTransition_PTC_btest.cpptest/sandbox/Solve2D_Coupled4x4_IBL_fx67k170_single_run_toy.cpptest/sandbox/Solve2D_Coupled4x4_IBL_fx67k170_toy.cppa637a1e68e585c621b5d40a8caa9e4ae0b658feb1641320495000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.educleaned up & fixed sandbox cases for XfoilPanel+IBL2D single run and drag polar for airfoil 2022-01-04 13:21:35 -0500a637a1e68e585c621b5d40a8caa9e4ae0b658febcleaned up & fixed sandbox cases for XfoilPanel+IBL2D single run and drag polar for airfoiledittest/sandbox/Solve2D_Coupled4x4_IBL_fx67k170_drag_polar_toy.cppedittest/system/CodeConsistency/Solve2D_Coupled4x4_IBLSplitAmpLag_CorrelationClosure_CapturedTransition_PTC_btest.cppdeletetest/sandbox/Solve2D_Coupled4x4_IBL_fx67k170_toy.cppdeletetest/sandbox/Solve2D_Coupled4x4_IBLSplitAmpLag_CorrelationClosure_CapturedTransition_PTC_toy.cppaddtest/sandbox/Solve2D_Coupled4x4_IBL_fx67k170_single_run_toy.cpptest/system/AnalyticSolve/AnalyticSolve3D_IBLFourEqn_StagnationFlow_LamiBL_Triangle_btest.cpptest/system/AnalyticSolve/AnalyticSolve3D_IBL3D_StagnationFlow_LamiBL_Triangle_btest.cpptest/sandbox/Solve3D_Uncoupled_IBL_FlatPlate_Blasius_toy.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cpptest/sandbox/Solve3D_Uncoupled_IBLFourEqn_FlatPlate_Blasius_toy.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cpptest/system/AnalyticSolve/AnalyticSolve_IBL3D_StagnationFlow_LamiBL_Triangle_btest.cpptest/system/AnalyticSolve/AnalyticSolve2D_DGAdvective_IBLSplitAmpLag_StagnationFlow_LamiBL_btest.cppsrc/Discretization/Galerkin/IntegrandInteriorTrace_Galerkin_manifold.htest/system/CodeConsistency/Solve2D_Uncoupled_DGAdvectiveIBLUniField_CorrelationClosure_LamiBL_btest.cpptest/sandbox/Solve3D_Uncoupled_IBLFourEqn_FlatPlate_StagnationRadial_toy.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Triangle_btest.cpptest/system/AnalyticSolve/AnalyticSolve2D_DGAdvective_IBL_StagnationFlow_SingleElem_LamiBL_btest.cpptest/system/CodeConsistency/Solve2D_Uncoupled_HDGAdvectiveIBL_LamiBL_btest.cpp42271870b3c344d43286aa255c89a15ebbb410701641327061000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edumiscellanenous fixes of compile error and formatting style 2022-01-04 15:11:01 -050042271870b3c344d43286aa255c89a15ebbb41070miscellanenous fixes of compile error and formatting styleedittest/sandbox/Solve3D_Uncoupled_IBL_FlatPlate_Blasius_toy.cppedittest/system/AnalyticSolve/AnalyticSolve2D_DGAdvective_IBLSplitAmpLag_StagnationFlow_LamiBL_btest.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cppedittest/system/AnalyticSolve/AnalyticSolve2D_DGAdvective_IBL_StagnationFlow_SingleElem_LamiBL_btest.cppedittest/system/CodeConsistency/Solve2D_Uncoupled_DGAdvectiveIBLUniField_CorrelationClosure_LamiBL_btest.cppedittest/system/CodeConsistency/Solve2D_Uncoupled_HDGAdvectiveIBL_LamiBL_btest.cppedittest/sandbox/Solve3D_Uncoupled_IBLFourEqn_FlatPlate_Blasius_toy.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppeditsrc/Discretization/Galerkin/IntegrandInteriorTrace_Galerkin_manifold.hedittest/sandbox/Solve3D_Uncoupled_IBLFourEqn_FlatPlate_StagnationRadial_toy.cppaddtest/system/AnalyticSolve/AnalyticSolve3D_IBL3D_StagnationFlow_LamiBL_Triangle_btest.cppedittest/system/AnalyticSolve/AnalyticSolve3D_IBLFourEqn_StagnationFlow_LamiBL_Triangle_btest.cppdeletetest/system/AnalyticSolve/AnalyticSolve_IBL3D_StagnationFlow_LamiBL_Triangle_btest.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Triangle_btest.cpptest/unit/UserInterfaces/LIPSolver_btest.cpptest/unit/pde/FullPotential/BCIncompressiblePotentialTwoField2D_sansLG_btest.cpptest/sandbox/Solve3D_CG_NACA_FP_Virtual_toy.cpptest/unit/pde/FullPotential/BCLinearizedIncompressiblePotential2D_sansLG_btest.cpptest/unit/pde/FullPotential/BCLinearizedIncompressiblePotential3D_btest.cpptest/sandbox/Solve3D_CG_NACA_LIP_Drela_toy.cpptest/sandbox/Solve3D_CG_FP_duct_toy.cpptest/sandbox/Solve3D_CG_NACA_FP_Drela_toy.cpptest/sandbox/Solve3D_CG_NACA_FP_MD_toy.cppsrc/UserInterfaces/capsAIM/sansLIPAIM.cpp102d9aa5f2cfb93deaf176924062ee6ddb0f790a1641327116000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduremoved uses of gradqn and q in Neumann and Dirichlet BCs respectively for potential flow 2022-01-04 15:11:56 -0500102d9aa5f2cfb93deaf176924062ee6ddb0f790aremoved uses of gradqn and q in Neumann and Dirichlet BCs respectively for potential flowedittest/sandbox/Solve3D_CG_NACA_FP_MD_toy.cppedittest/sandbox/Solve3D_CG_NACA_FP_Virtual_toy.cppeditsrc/UserInterfaces/capsAIM/sansLIPAIM.cppedittest/unit/pde/FullPotential/BCLinearizedIncompressiblePotential3D_btest.cppedittest/unit/pde/FullPotential/BCIncompressiblePotentialTwoField2D_sansLG_btest.cppedittest/unit/pde/FullPotential/BCLinearizedIncompressiblePotential2D_sansLG_btest.cppedittest/sandbox/Solve3D_CG_FP_duct_toy.cppedittest/sandbox/Solve3D_CG_NACA_FP_Drela_toy.cppedittest/sandbox/Solve3D_CG_NACA_LIP_Drela_toy.cppedittest/unit/UserInterfaces/LIPSolver_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppsrc/pde/IBL/PDEIBL3D.htest/unit/UnitGrids/XField3D_BoxBoundary_Quad_X1.cpp0e0c61f5614055a173f694e298cbb53b38c718561641328448000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edufixed some compile errors and formatting style 2022-01-04 15:34:08 -05000e0c61f5614055a173f694e298cbb53b38c71856fixed some compile errors and formatting styleedittest/unit/UnitGrids/XField3D_BoxBoundary_Quad_X1.cppeditsrc/pde/IBL/PDEIBL3D.hedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cpptest/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d1_p3_Test.txttest/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d1_p0_Test.txttest/system/AnalyticSolve/AnalyticSolve3D_IBLFourEqn_StagnationFlow_LamiBL_Triangle_btest.cpptest/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d2_p4_Test.txttest/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d2_p0_Test.txttest/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d2_p2_Test.txtsrc/pde/IBL/PDEIBLFourEqn3D.htest/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d1_p4_Test.txttest/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d1_p2_Test.txttest/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d1_p1_Test.txttest/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d2_p3_Test.txttest/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d2_p1_Test.txt6268270d3bc396df4e778ef9e9bf61d4f7f75f2a1641328498000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduupdated pyrite check files for IBLFourEqn3D to use LF flux without mass correction 2022-01-04 15:34:58 -05006268270d3bc396df4e778ef9e9bf61d4f7f75f2aupdated pyrite check files for IBLFourEqn3D to use LF flux without mass correctionedittest/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d2_p2_Test.txtedittest/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d2_p4_Test.txtedittest/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d1_p3_Test.txtedittest/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d1_p2_Test.txtedittest/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d1_p0_Test.txtedittest/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d2_p1_Test.txtedittest/system/AnalyticSolve/AnalyticSolve3D_IBLFourEqn_StagnationFlow_LamiBL_Triangle_btest.cppedittest/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d2_p3_Test.txteditsrc/pde/IBL/PDEIBLFourEqn3D.hedittest/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d1_p4_Test.txtedittest/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d2_p0_Test.txtedittest/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d1_p1_Test.txttest/unit/pde/IBL/ProjectToQauxi3D_btest.cpptest/unit/pde/IBL/ProjectToQauxi2D_btest.cppsrc/pde/IBL/ProjectToQauxi2D.hsrc/Discretization/JacobianParam_impl.hf859d01f176e9b2c789116a1f24cca1725b11c591641331217000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edufixed miscellaneous unit tests related to coupled IBL 2022-01-04 16:20:17 -0500f859d01f176e9b2c789116a1f24cca1725b11c59fixed miscellaneous unit tests related to coupled IBLeditsrc/pde/IBL/ProjectToQauxi2D.hedittest/unit/pde/IBL/ProjectToQauxi2D_btest.cppeditsrc/Discretization/JacobianParam_impl.hedittest/unit/pde/IBL/ProjectToQauxi3D_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cpp566e2334e64a0dfed562933430e3a72470f568d61641332979000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edufixed FP-IBL3 jacobian ping test 2022-01-04 16:49:39 -0500566e2334e64a0dfed562933430e3a72470f568d6fixed FP-IBL3 jacobian ping testedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cpptest/sandbox/Solve3D_CG_NACA_FP_Drela_toy.cpptest/sandbox/Solve3D_CG_NACA_FP_Virtual_toy.cppsrc/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.htest/sandbox/Solve3D_CG_NACA_FP_MD_toy.cppsrc/pde/FullPotential/BCFullPotential3D.cpp5015072e9e330ab0afec636875d83deec063e7f31641342499000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edufixed a few compile errors and warnings related to a few sandbox test cases not up-to-date with latest FullPotential PDE/BC implementation 2022-01-04 19:28:19 -05005015072e9e330ab0afec636875d83deec063e7f3fixed a few compile errors and warnings related to a few sandbox test cases not up-to-date with latest FullPotential PDE/BC implementationeditsrc/pde/FullPotential/BCFullPotential3D.cppeditsrc/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.hedittest/sandbox/Solve3D_CG_NACA_FP_MD_toy.cppedittest/sandbox/Solve3D_CG_NACA_FP_Drela_toy.cppedittest/sandbox/Solve3D_CG_NACA_FP_Virtual_toy.cpptest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_HDGAdvIBL_Panel_btest.cpptest/sandbox/Solve2D_Coupled4x4_IBL_fx67k170_single_run_toy.cpptest/system/CodeConsistency/Solve2D_Coupled4x4_IBL_Panel_NACA0004_FittedTransition_TwoLayerNewton_btest.cppsrc/pde/IBL/JacobianParam_ProjectToQauxv_FullPotential3D.htest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_HubtraceHDGAdvIBL_CutCellNaturalTransition_Panel_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_IBL_Panel_btest.cppsrc/pde/IBL/Residual_ProjectToQauxv_FullPotential3D.htest/sandbox/Solve2D_Coupled4x4_IBL_fx67k170_drag_polar_toy.cppsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PiecewiseConstSourcePanel_FlatPlate3D.hsrc/pde/IBL/ResidualCell_ProjectToQauxv_FullPotential3D.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D.htest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cpptest/system/CodeConsistency/Solve2D_Coupled4x4_IBLSplitAmpLag_CorrelationClosure_CapturedTransition_PTC_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellNaturalTransitionIBL_Panel_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellForcedTransitionIBL_Panel_btest.cpptest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Triangle_btest.cppsrc/pde/IBL/JacobianCellParam_ProjectToQauxv_FullPotential3D.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_XfoilPanel.htest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cppeb1701fc586a0965fdf04f2d770b38ab4377ed991641357449000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edurenamed class & files. re-org include. started a LIP+IBL3 sandbox case by copying over FP-IBL3 2022-01-04 23:37:29 -0500eb1701fc586a0965fdf04f2d770b38ab4377ed99renamed class & files. re-org include. started a LIP+IBL3 sandbox case by copying over FP-IBL3edittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellNaturalTransitionIBL_Panel_btest.cppeditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PiecewiseConstSourcePanel_FlatPlate3D.hedittest/sandbox/Solve2D_Coupled4x4_IBL_fx67k170_single_run_toy.cppedittest/system/CodeConsistency/Solve2D_Coupled4x4_IBLSplitAmpLag_CorrelationClosure_CapturedTransition_PTC_btest.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_IBL_Panel_btest.cppaddsrc/pde/IBL/ResidualCell_ProjectToQauxv_FullPotential3D.hedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Triangle_btest.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cppaddtest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cppeditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D.hedittest/system/CodeConsistency/Solve2D_Coupled4x4_IBL_Panel_NACA0004_FittedTransition_TwoLayerNewton_btest.cppeditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_XfoilPanel.hedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellForcedTransitionIBL_Panel_btest.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_HubtraceHDGAdvIBL_CutCellNaturalTransition_Panel_btest.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_HDGAdvIBL_Panel_btest.cppedittest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cppedittest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cppdeletesrc/pde/IBL/JacobianParam_ProjectToQauxv_FullPotential3D.hedittest/sandbox/Solve2D_Coupled4x4_IBL_fx67k170_drag_polar_toy.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppaddsrc/pde/IBL/JacobianCellParam_ProjectToQauxv_FullPotential3D.hdeletesrc/pde/IBL/Residual_ProjectToQauxv_FullPotential3D.htest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cpptest/unit/Discretization/Block/CMakeLists.txt99a05540d4dafb82e8f6bfdd9ddab8fffe3ad0f31641362322000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduallows FP-IBL3 jacobian ping test to run longer on Jenkins 2022-01-05 00:58:42 -050099a05540d4dafb82e8f6bfdd9ddab8fffe3ad0f3allows FP-IBL3 jacobian ping test to run longer on Jenkinsedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppedittest/unit/Discretization/Block/CMakeLists.txttest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D_btest.cppc2ae4eea42a3c9b66b779c76eb1f6396be7a5a431641363836000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edufixed unit test of auxv aes for 3D full potential 2022-01-05 01:23:56 -0500c2ae4eea42a3c9b66b779c76eb1f6396be7a5a43fixed unit test of auxv aes for 3D full potentialedittest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D_btest.cpptest/unit/UserInterfaces/LIPSolver_btest.cpptest/unit/pde/FullPotential/BCIncompressiblePotentialTwoField2D_sansLG_btest.cpptest/unit/pde/FullPotential/BCLinearizedIncompressiblePotential2D_sansLG_btest.cpptest/unit/pde/FullPotential/BCLinearizedIncompressiblePotential3D_btest.cppsrc/UserInterfaces/capsAIM/sansLIPAIM.cpptest/sandbox/Solve3D_CG_NACA_LIP_Drela_toy.cppb74cc49345160663866fb355a4033c78d5b88ab71641398109000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduReverted some changes in the use of LIP BCs. These changes should NOT have been made 2022-01-05 10:55:09 -0500b74cc49345160663866fb355a4033c78d5b88ab7Reverted some changes in the use of LIP BCs. These changes should NOT have been madeedittest/unit/pde/FullPotential/BCIncompressiblePotentialTwoField2D_sansLG_btest.cppeditsrc/UserInterfaces/capsAIM/sansLIPAIM.cppedittest/sandbox/Solve3D_CG_NACA_LIP_Drela_toy.cppedittest/unit/UserInterfaces/LIPSolver_btest.cppedittest/unit/pde/FullPotential/BCLinearizedIncompressiblePotential2D_sansLG_btest.cppedittest/unit/pde/FullPotential/BCLinearizedIncompressiblePotential3D_btest.cpptest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D_btest.cpptest/unit/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D_btest.cpptest/unit/pde/IBL/CMakeLists.txta7aedc08ba58c9714abf169c06330666773efaab1641398542000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edurelocated a unit test to IBL folder 2022-01-05 11:02:22 -0500a7aedc08ba58c9714abf169c06330666773efaabrelocated a unit test to IBL folderdeletetest/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D_btest.cppedittest/unit/pde/IBL/CMakeLists.txtaddtest/unit/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cppcfc94320ba62cd5821ba7ea039c78a02d7012abe1641403901000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edupassed a few ping tests related to coupled IBL3 2022-01-05 12:31:41 -0500cfc94320ba62cd5821ba7ea039c78a02d7012abepassed a few ping tests related to coupled IBL3edittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cpptest/unit/Field/Field_DG_BoundaryTrace_matchAreaCell_btest.cpptest/unit/UnitGrids/XField3D_BoxBoundary_Quad_X1_btest.cppc741c7a1ef053d1fb05c5e5115f0582ca47e175a1641418032000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edufixed two unit tests troubled by misuse of MPI communicator 2022-01-05 16:27:12 -0500c741c7a1ef053d1fb05c5e5115f0582ca47e175afixed two unit tests troubled by misuse of MPI communicatoredittest/unit/UnitGrids/XField3D_BoxBoundary_Quad_X1_btest.cppedittest/unit/Field/Field_DG_BoundaryTrace_matchAreaCell_btest.cpptest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cppsrc/LinearAlgebra/SparseLinAlg/ScalarMatrix_CRS_int.cppsrc/LinearAlgebra/NonZeroPatternType.hsrc/LinearAlgebra/VectorType.hsrc/pde/FullPotential/PDELinearizedIncompressiblePotential3D.h0d0cd3f39cadcbdcf9a8a9a55ef4c8cab14630681641426830000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edurefactored some explicit instantiations for better generality and less tedious code 2022-01-05 18:53:50 -05000d0cd3f39cadcbdcf9a8a9a55ef4c8cab1463068refactored some explicit instantiations for better generality and less tedious codeeditsrc/LinearAlgebra/SparseLinAlg/ScalarMatrix_CRS_int.cppeditsrc/LinearAlgebra/NonZeroPatternType.heditsrc/LinearAlgebra/VectorType.hedittest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cppeditsrc/pde/FullPotential/PDELinearizedIncompressiblePotential3D.hsrc/pde/IBL/JacobianParam_FullPotential_Qauxi.h4b39b3445d01843da66b8391a71019f994989c5b1641426938000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduuse MatrixS_or_T instead of MatrixS to account for the case of MatrixQ=Real 2022-01-05 18:55:38 -05004b39b3445d01843da66b8391a71019f994989c5buse MatrixS_or_T instead of MatrixS to account for the case of MatrixQ=Realeditsrc/pde/IBL/JacobianParam_FullPotential_Qauxi.htest/unit/pde/IBL/CMakeLists.txttest/unit/Discretization/Block/CMakeLists.txt6549aae64f90ad9d55d44d364ca4f408c99f487b1641500609000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edurelaxed time limit for a block jacobian ping test on Jenkins. trying to fix an undefined reference error by altering the order of loading lib in CMakeLists 2022-01-06 15:23:29 -05006549aae64f90ad9d55d44d364ca4f408c99f487brelaxed time limit for a block jacobian ping test on Jenkins. trying to fix an undefined reference error by altering the order of loading lib in CMakeListsedittest/unit/pde/IBL/CMakeLists.txtedittest/unit/Discretization/Block/CMakeLists.txttest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cpptest/unit/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_3D_btest.cppsrc/pde/IBL/IntegrandCell_ProjectToQauxv3D.hsrc/pde/IBL/IntegrandCell_ProjectToQauxv_FullPotential3D.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_3D.hsrc/pde/IBL/ResidualCell_ProjectToQauxv_FullPotential3D.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D.hsrc/pde/IBL/ResidualCell_ProjectToQauxv.htest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppsrc/pde/IBL/JacobianCellParam_ProjectToQauxv.htest/unit/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D_btest.cpptest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cppsrc/pde/IBL/JacobianCellParam_ProjectToQauxv_FullPotential3D.h4d6ede7499e2d6b203386d538c9241079ce317311641508789000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edurename/reorg files/classes to remove FullPotential 3D specificity from Auxv equation implementation 2022-01-06 17:39:49 -05004d6ede7499e2d6b203386d538c9241079ce31731rename/reorg files/classes to remove FullPotential 3D specificity from Auxv equation implementationaddsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_3D.hdeletetest/unit/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D_btest.cppdeletesrc/pde/IBL/JacobianCellParam_ProjectToQauxv_FullPotential3D.haddsrc/pde/IBL/IntegrandCell_ProjectToQauxv3D.hdeletesrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D.haddsrc/pde/IBL/ResidualCell_ProjectToQauxv.haddtest/unit/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_3D_btest.cppdeletesrc/pde/IBL/ResidualCell_ProjectToQauxv_FullPotential3D.hdeletesrc/pde/IBL/IntegrandCell_ProjectToQauxv_FullPotential3D.haddsrc/pde/IBL/JacobianCellParam_ProjectToQauxv.hedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppedittest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cppedittest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cppsrc/pde/FullPotential/PDEFullPotential3D.hsrc/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.hsrc/Discretization/Galerkin/JacobianBoundaryTrace_Galerkin_DerivativeWithBCDataFieldQauxi.hsrc/pde/FullPotential/PDELinearizedIncompressiblePotential3D.he41ced23ba46ba2560963fb29f1443695f0f40d21641508890000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduRelocated Matrix PDE_Qauxi typedef into PDE class in lieu of integrand class 2022-01-06 17:41:30 -0500e41ced23ba46ba2560963fb29f1443695f0f40d2Relocated Matrix PDE_Qauxi typedef into PDE class in lieu of integrand classeditsrc/pde/FullPotential/PDEFullPotential3D.heditsrc/Discretization/Galerkin/JacobianBoundaryTrace_Galerkin_DerivativeWithBCDataFieldQauxi.heditsrc/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.heditsrc/pde/FullPotential/PDELinearizedIncompressiblePotential3D.htest/unit/Discretization/Block/CMakeLists.txttest/unit/pde/IBL/CMakeLists.txt8fbc62cbe044ddd9e836890c153ec3e443987d371641509203000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduLooks like Jenkins censored the previous commit msg cuz it contains the word 'e-r-r-o-r'. Amend the commit msg now. relaxed time limit for a block jacobian ping test on Jenkins. trying to fix an undefined reference e-r-r-o-r by altering the order of loading lib in CMakeLists 2022-01-06 17:46:43 -05008fbc62cbe044ddd9e836890c153ec3e443987d37Looks like Jenkins censored the previous commit msg cuz it contains the word 'e-r-r-o-r'. Amend the commit msg now. relaxed time limit for a block jacobian ping test on Jenkins. trying to fix an undefined reference e-r-r-o-r by altering the order of loading lib in CMakeListsedittest/unit/Discretization/Block/CMakeLists.txtedittest/unit/pde/IBL/CMakeLists.txtsrc/pde/IBL/BCIBL3D.h5ff8f77fc9a813abdd18ed5bed549a5dbdd444791641511347000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edumake a method protected as it is not a necessary API for mitLG BC 2022-01-06 18:22:27 -05005ff8f77fc9a813abdd18ed5bed549a5dbdd44479make a method protected as it is not a necessary API for mitLG BCeditsrc/pde/IBL/BCIBL3D.hsrc/Discretization/Galerkin/IntegrandBoundaryTrace_Dirichlet_mitLG_Galerkin.hsrc/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.hcee4372d25509885043c1c61f3eea46a46b87e7b1641513494000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduAdd comments. Make basis functions class members to reduce re-allocating memory during operator calls 2022-01-06 18:58:14 -0500cee4372d25509885043c1c61f3eea46a46b87e7bAdd comments. Make basis functions class members to reduce re-allocating memory during operator callseditsrc/Discretization/Galerkin/IntegrandBoundaryTrace_Dirichlet_mitLG_Galerkin.heditsrc/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.htest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cppsrc/pde/FullPotential/BCLinearizedIncompressiblePotential3D.cppsrc/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_Galerkin_LIP_HACK.hsrc/pde/FullPotential/BCLinearizedIncompressiblePotential3D.hsrc/pde/NDConvert/BCNDConvertSpace3D.hsrc/pde/FullPotential/PDELinearizedIncompressiblePotential3D.hefa38db2a110df6e4342c127e8e228d24651dcf51641513622000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduRefactored LIP PDE to prep it to be run with coupled IBL3. Added Dirichlet_mitLG BC for LIP 2022-01-06 19:00:22 -0500efa38db2a110df6e4342c127e8e228d24651dcf5Refactored LIP PDE to prep it to be run with coupled IBL3. Added Dirichlet_mitLG BC for LIPeditsrc/pde/FullPotential/BCLinearizedIncompressiblePotential3D.heditsrc/pde/NDConvert/BCNDConvertSpace3D.hedittest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cppaddsrc/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_Galerkin_LIP_HACK.heditsrc/pde/FullPotential/BCLinearizedIncompressiblePotential3D.cppeditsrc/pde/FullPotential/PDELinearizedIncompressiblePotential3D.htest/unit/pde/IBL/ProjectToQauxi3D_btest.cpp9336538a3c6533fee950c040286c3bcf3add61651641530761000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edurelaxed machine precision level tolerance in a unit test for intel compiler to pass 2022-01-06 23:46:01 -05009336538a3c6533fee950c040286c3bcf3add6165relaxed machine precision level tolerance in a unit test for intel compiler to passedittest/unit/pde/IBL/ProjectToQauxi3D_btest.cppsrc/NonLinearSolver/LineUpdate/HalvingSearchLineUpdate_MatrixBlock_4x4_Instantiate.cppsrc/LinearAlgebra/SparseLinAlg/Direct/UMFPACK/UMFPACKSolver_MatrixBlock_4x4_Instantiate.cppsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_MatrixBlock_3x3_Instantiate.cppsrc/NonLinearSolver/NewtonSolver_MatrixBlock_3x3_Instantiate.cppsrc/LinearAlgebra/SparseLinAlg/Direct/UMFPACK/UMFPACKSolver_MatrixBlock_3x3_Instantiate.cppsrc/LinearAlgebra/SparseLinAlg/Direct/MKL_PARDISO/MKL_PARDISOSolver_MatrixBlock_3x3_Instantiate.cppsrc/LinearAlgebra/SparseLinAlg/Krylov/FGMRES_MatrixBlock_3x3_Instantiate.cppsrc/LinearAlgebra/SparseLinAlg/Direct/MKL_PARDISO/MKL_PARDISOSolver_MatrixBlock_4x4_Instantiate.cppsrc/LinearAlgebra/SparseLinAlg/ScalarMatrix_CRS_int.cppsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_MatrixBlock_4x4_Instantiate.cppsrc/NonLinearSolver/NewtonSolver_MatrixBlock_4x4_Instantiate.cppsrc/LinearAlgebra/SparseLinAlg/Krylov/FGMRES_MatrixBlock_4x4_Instantiate.cpp35f5838a117abb791b13b569ccb187f009421d141641535514000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduReplaced tedious & repetitive block matrix instantiation statements with macro definitions. Added explicit instantiations for MatrixBlock_4x4 for LIP-IBL3 coupling 2022-01-07 01:05:14 -050035f5838a117abb791b13b569ccb187f009421d14Replaced tedious & repetitive block matrix instantiation statements with macro definitions. Added explicit instantiations for MatrixBlock_4x4 for LIP-IBL3 couplingeditsrc/LinearAlgebra/SparseLinAlg/Direct/UMFPACK/UMFPACKSolver_MatrixBlock_3x3_Instantiate.cppeditsrc/NonLinearSolver/NewtonSolver_MatrixBlock_4x4_Instantiate.cppeditsrc/LinearAlgebra/SparseLinAlg/Krylov/FGMRES_MatrixBlock_3x3_Instantiate.cppeditsrc/LinearAlgebra/SparseLinAlg/Direct/MKL_PARDISO/MKL_PARDISOSolver_MatrixBlock_4x4_Instantiate.cppeditsrc/LinearAlgebra/SparseLinAlg/Krylov/FGMRES_MatrixBlock_4x4_Instantiate.cppeditsrc/LinearAlgebra/SparseLinAlg/ScalarMatrix_CRS_int.cppeditsrc/NonLinearSolver/NewtonSolver_MatrixBlock_3x3_Instantiate.cppeditsrc/LinearAlgebra/SparseLinAlg/Direct/MKL_PARDISO/MKL_PARDISOSolver_MatrixBlock_3x3_Instantiate.cppeditsrc/NonLinearSolver/LineUpdate/HalvingSearchLineUpdate_MatrixBlock_4x4_Instantiate.cppeditsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_MatrixBlock_4x4_Instantiate.cppeditsrc/LinearAlgebra/SparseLinAlg/Direct/UMFPACK/UMFPACKSolver_MatrixBlock_4x4_Instantiate.cppeditsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_MatrixBlock_3x3_Instantiate.cppsrc/NonLinearSolver/LineUpdate/HalvingSearchLineUpdate_MatrixBlock_4x4_Instantiate.cppsrc/LinearAlgebra/SparseLinAlg/Direct/MKL_PARDISO/MKL_PARDISOSolver_MatrixBlock_3x3_Instantiate.cppsrc/LinearAlgebra/SparseLinAlg/Direct/UMFPACK/UMFPACKSolver_MatrixBlock_3x3_Instantiate.cppsrc/LinearAlgebra/SparseLinAlg/Direct/MKL_PARDISO/MKL_PARDISOSolver_MatrixBlock_4x4_Instantiate.cppsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_MatrixBlock_4x4_Instantiate.cppsrc/NonLinearSolver/NewtonSolver_MatrixBlock_4x4_Instantiate.cppsrc/LinearAlgebra/SparseLinAlg/Krylov/FGMRES_MatrixBlock_4x4_Instantiate.cppsrc/LinearAlgebra/SparseLinAlg/Direct/UMFPACK/UMFPACKSolver_MatrixBlock_4x4_Instantiate.cppsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_MatrixBlock_3x3_Instantiate.cppsrc/NonLinearSolver/NewtonSolver_MatrixBlock_3x3_Instantiate.cppsrc/LinearAlgebra/SparseLinAlg/Krylov/FGMRES_MatrixBlock_3x3_Instantiate.cppsrc/LinearAlgebra/SparseLinAlg/ScalarMatrix_CRS_int.cppsrc/LinearAlgebra/DenseLinAlg/StaticSize/MatMul/MatrixS_MatMul_Native_Real_Instantiate.cppf6f82da079f78566c194516055692aab6c8e2e731641536580000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduReplaced tedious & repetitive block matrix instantiation statements with macro definitions. Added explicit instantiations for MatrixBlock_4x4 for LIP-IBL3 coupling 2022-01-07 01:23:00 -0500f6f82da079f78566c194516055692aab6c8e2e73Replaced tedious & repetitive block matrix instantiation statements with macro definitions. Added explicit instantiations for MatrixBlock_4x4 for LIP-IBL3 couplingeditsrc/LinearAlgebra/SparseLinAlg/Direct/MKL_PARDISO/MKL_PARDISOSolver_MatrixBlock_3x3_Instantiate.cppeditsrc/LinearAlgebra/SparseLinAlg/ScalarMatrix_CRS_int.cppeditsrc/LinearAlgebra/SparseLinAlg/Direct/UMFPACK/UMFPACKSolver_MatrixBlock_3x3_Instantiate.cppeditsrc/NonLinearSolver/NewtonSolver_MatrixBlock_3x3_Instantiate.cppeditsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_MatrixBlock_3x3_Instantiate.cppeditsrc/LinearAlgebra/SparseLinAlg/Krylov/FGMRES_MatrixBlock_3x3_Instantiate.cppeditsrc/NonLinearSolver/NewtonSolver_MatrixBlock_4x4_Instantiate.cppeditsrc/LinearAlgebra/SparseLinAlg/Krylov/FGMRES_MatrixBlock_4x4_Instantiate.cppeditsrc/LinearAlgebra/SparseLinAlg/Direct/MKL_PARDISO/MKL_PARDISOSolver_MatrixBlock_4x4_Instantiate.cppeditsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_MatrixBlock_4x4_Instantiate.cppeditsrc/LinearAlgebra/DenseLinAlg/StaticSize/MatMul/MatrixS_MatMul_Native_Real_Instantiate.cppeditsrc/NonLinearSolver/LineUpdate/HalvingSearchLineUpdate_MatrixBlock_4x4_Instantiate.cppeditsrc/LinearAlgebra/SparseLinAlg/Direct/UMFPACK/UMFPACKSolver_MatrixBlock_4x4_Instantiate.cppsrc/LinearAlgebra/SparseLinAlg/Direct/MKL_PARDISO/MKL_PARDISOSolver_MatrixBlock_4x4_Instantiate.cppsrc/LinearAlgebra/SparseLinAlg/Direct/MKL_PARDISO/MKL_PARDISOSolver_MatrixBlock_3x3_Instantiate.cpp02440adb87cb58f08423082941cc0b18f7933e711641576759000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edufixed some lingering merge conflicts 2022-01-07 12:32:39 -050002440adb87cb58f08423082941cc0b18f7933e71fixed some lingering merge conflictseditsrc/LinearAlgebra/SparseLinAlg/Direct/MKL_PARDISO/MKL_PARDISOSolver_MatrixBlock_4x4_Instantiate.cppeditsrc/LinearAlgebra/SparseLinAlg/Direct/MKL_PARDISO/MKL_PARDISOSolver_MatrixBlock_3x3_Instantiate.cppsrc/pde/FullPotential/BCFullPotential3D.h4ba506c74d0b0f51f8240bae953f4608d5de7f271641577661000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edufix no-return warnings in a function with non-void return type 2022-01-07 12:47:41 -05004ba506c74d0b0f51f8240bae953f4608d5de7f27fix no-return warnings in a function with non-void return typeeditsrc/pde/FullPotential/BCFullPotential3D.htest/unit/pde/FullPotential/PDELinearizedIncompressiblePotential3D_btest.cppsrc/LinearAlgebra/SparseLinAlg/ScalarMatrix_CRS_int.cpptest/unit/LinearAlgebra/BlockLinAlg/MatrixBlock_4x4_SparseMatrix_CRS_btest.cpptest/unit/IO/BlockLinAlg/MatrixBlock4x4_MatrixD_SparseMatrix_CRS_MatrixS.mmsrc/pde/FullPotential/PDELinearizedIncompressiblePotential3D.h9673a24ab9343efbeae5642e42ae5906e4fedbb91641578998000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edurefactored miscellaneous unit tests. added missing explicit instantiation for 4x4 block matrix 2022-01-07 13:09:58 -05009673a24ab9343efbeae5642e42ae5906e4fedbb9refactored miscellaneous unit tests. added missing explicit instantiation for 4x4 block matrixedittest/unit/IO/BlockLinAlg/MatrixBlock4x4_MatrixD_SparseMatrix_CRS_MatrixS.mmedittest/unit/pde/FullPotential/PDELinearizedIncompressiblePotential3D_btest.cppeditsrc/pde/FullPotential/PDELinearizedIncompressiblePotential3D.heditsrc/LinearAlgebra/SparseLinAlg/ScalarMatrix_CRS_int.cppedittest/unit/LinearAlgebra/BlockLinAlg/MatrixBlock_4x4_SparseMatrix_CRS_btest.cpptest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cpp4be62858ac2020e8ecf158832ba1a61cc94886b41641586311000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduadded option of Dirichlet_mitLG for LIP test --> result matches LinearScalar_sansLG, so not need bother with mitLG 2022-01-07 15:11:51 -05004be62858ac2020e8ecf158832ba1a61cc94886b4added option of Dirichlet_mitLG for LIP test --> result matches LinearScalar_sansLG, so not need bother with mitLGedittest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cppsrc/pde/FullPotential/BCFullPotential3D.hab8ee4fe5358cf3575b9d0fae8556c2b5b72290a1641592087000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edufix missing return statement issue 2022-01-07 16:48:07 -0500ab8ee4fe5358cf3575b9d0fae8556c2b5b72290afix missing return statement issueeditsrc/pde/FullPotential/BCFullPotential3D.hsrc/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.hsrc/pde/FullPotential/BCFullPotential3D.hf09fd6ec624cbd3802fd95b92c2ccb4b11d529581641663576000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduminor cleanup 2022-01-08 12:39:36 -0500f09fd6ec624cbd3802fd95b92c2ccb4b11d52958minor cleanupeditsrc/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.heditsrc/pde/FullPotential/BCFullPotential3D.htest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cppsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_3D.hsrc/pde/IBL/IntegrandCell_ProjectToQauxv3D.h824e0642459f541a49331ff45025e635a4a06ac21641701830000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduadd state validity check assertions for Auxv projection integrand class 2022-01-08 23:17:10 -0500824e0642459f541a49331ff45025e635a4a06ac2add state validity check assertions for Auxv projection integrand classeditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_3D.heditsrc/pde/IBL/IntegrandCell_ProjectToQauxv3D.hedittest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cppsrc/pde/FullPotential/BCLinearizedIncompressiblePotential3D.cpptest/unit/IO/pde/BCLinearizedIncompressiblePotential3D_pattern.txttest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cppsrc/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_Galerkin_LIP_HACK.hsrc/pde/FullPotential/BCLinearizedIncompressiblePotential3D.hsrc/pde/FullPotential/PDELinearizedIncompressiblePotential3D.hf53ad62b951825b249c44768430c7dc43ca1b36b1641703140000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edurefactored LIP BC and PDE to enable coupled LIP-IBL3 test case to run 2022-01-08 23:39:00 -0500f53ad62b951825b249c44768430c7dc43ca1b36brefactored LIP BC and PDE to enable coupled LIP-IBL3 test case to runeditsrc/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_Galerkin_LIP_HACK.heditsrc/pde/FullPotential/PDELinearizedIncompressiblePotential3D.heditsrc/pde/FullPotential/BCLinearizedIncompressiblePotential3D.heditsrc/pde/FullPotential/BCLinearizedIncompressiblePotential3D.cppedittest/unit/IO/pde/BCLinearizedIncompressiblePotential3D_pattern.txtedittest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cpptest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cpptest/sandbox/Solve3D_Uncoupled_IBL_FlatPlate_Blasius_toy.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cpptest/sandbox/Solve3D_Uncoupled_IBLFourEqn_FlatPlate_Blasius_toy.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cpptest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Triangle_btest.cpptest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cppsrc/pde/IBL/BCIBL3D.htest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppsrc/pde/IBL/BCIBL3D.cppcc80e3e5c2d827f58f341db84a8d7ffc6b98b6171641747617000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edusimply renamed some variables for brevity 2022-01-09 12:00:17 -0500cc80e3e5c2d827f58f341db84a8d7ffc6b98b617simply renamed some variables for brevityeditsrc/pde/IBL/BCIBL3D.hedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Triangle_btest.cppeditsrc/pde/IBL/BCIBL3D.cppedittest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppedittest/sandbox/Solve3D_Uncoupled_IBLFourEqn_FlatPlate_Blasius_toy.cppedittest/sandbox/Solve3D_Uncoupled_IBL_FlatPlate_Blasius_toy.cppedittest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cppedittest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cpptest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cpp4b5ee22cd72a15607f1447be47772ccbaef3f8641641747864000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduspeed up LIP-IBL3 run by initializing with Falkner-Skan solution and solving IBL3 in uncoupled mode 2022-01-09 12:04:24 -05004b5ee22cd72a15607f1447be47772ccbaef3f864speed up LIP-IBL3 run by initializing with Falkner-Skan solution and solving IBL3 in uncoupled modeedittest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cpptest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cppsrc/pde/IBL/PDEIBLFourEqn3D.he3cdc168f95de46417f31c62ce85548e2cc1f3ea1641753639000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edumake IBL3 LF vs Full upwind flux choice a runtime decision 2022-01-09 13:40:39 -0500e3cdc168f95de46417f31c62ce85548e2cc1f3eamake IBL3 LF vs Full upwind flux choice a runtime decisioneditsrc/pde/IBL/PDEIBLFourEqn3D.hedittest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cppsrc/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.hsrc/pde/IBL/PDEIBLFourEqn3D.h0753ce99df2f792da50dcb216e58245ff675d7911641858073000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edufix typos that caused compile errors 2022-01-10 18:41:13 -05000753ce99df2f792da50dcb216e58245ff675d791fix typos that caused compile errorseditsrc/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.heditsrc/pde/IBL/PDEIBLFourEqn3D.htest/unit/pde/IBL/PDEIBLFourEqn3D_btest.cppe691cbcd5ddf107c881662a4039a200e9fbe1e591641881033000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduadd unit tests to 4-equation 3D IBL PDE 2022-01-11 01:03:53 -0500e691cbcd5ddf107c881662a4039a200e9fbe1e59add unit tests to 4-equation 3D IBL PDEaddtest/unit/pde/IBL/PDEIBLFourEqn3D_btest.cppsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_MatrixBlock_4x4_Instantiate.cpp7385f7a61c20c25ad022554e900411cbc8c649b11641914778000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduadd explicit instantiation 2022-01-11 10:26:18 -05007385f7a61c20c25ad022554e900411cbc8c649b1add explicit instantiationeditsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_MatrixBlock_4x4_Instantiate.cpptest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cppaa35ee016f59d88c39d5cfa8dcc4abcb981624951641915146000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduset minimum IBL output field order to be 1 2022-01-11 10:32:26 -0500aa35ee016f59d88c39d5cfa8dcc4abcb98162495set minimum IBL output field order to be 1edittest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cppsrc/LinearAlgebra/SparseLinAlg/Krylov/FGMRES_MatrixBlock_3x3_Instantiate.cpptest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cppsrc/NonLinearSolver/LineUpdate/HalvingSearchLineUpdate_MatrixBlock_3x3_Instantiate.cppsrc/LinearAlgebra/DenseLinAlg/StaticSize/MatMul/MatrixS_MatMul_Native_Surreal_Instantiate.cppsrc/LinearAlgebra/SparseLinAlg/Direct/MKL_PARDISO/MKL_PARDISOSolver_MatrixBlock_3x3_Instantiate.cpp9f3f5a82c857e11c3e4d8faba3ca471a7b75531e1641921829000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduadd/refactor explicit instantiations 2022-01-11 12:23:49 -05009f3f5a82c857e11c3e4d8faba3ca471a7b75531eadd/refactor explicit instantiationseditsrc/LinearAlgebra/SparseLinAlg/Krylov/FGMRES_MatrixBlock_3x3_Instantiate.cppeditsrc/NonLinearSolver/LineUpdate/HalvingSearchLineUpdate_MatrixBlock_3x3_Instantiate.cppedittest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cppeditsrc/LinearAlgebra/DenseLinAlg/StaticSize/MatMul/MatrixS_MatMul_Native_Surreal_Instantiate.cppeditsrc/LinearAlgebra/SparseLinAlg/Direct/MKL_PARDISO/MKL_PARDISOSolver_MatrixBlock_3x3_Instantiate.cppsrc/pde/FullPotential/BCLinearizedIncompressiblePotential3D.hsrc/Discretization/Galerkin/IntegrandBoundaryTrace_LinearScalar_sansLG_Galerkin.hfd3c626d223404d65fe60f99927458a9c7ec6ac71641956744000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edufixed issues with uninitialized data in boundary integand, which became a problem due to recent refactoring to 3D LIP BC (i.e. swtich from assignment to cumulation in data(...)). Some other fixes to compile warnings 2022-01-11 22:05:44 -0500fd3c626d223404d65fe60f99927458a9c7ec6ac7fixed issues with uninitialized data in boundary integand, which became a problem due to recent refactoring to 3D LIP BC (i.e. swtich from assignment to cumulation in data(...)). Some other fixes to compile warningseditsrc/pde/FullPotential/BCLinearizedIncompressiblePotential3D.heditsrc/Discretization/Galerkin/IntegrandBoundaryTrace_LinearScalar_sansLG_Galerkin.htest/unit/UnitGrids/XField3D_Box_Hex_X1.cpptest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cpptest/unit/UnitGrids/XField3D_Box_Hex_X1.h3974dc01c1e06fd7ddbd954786cdc5508f95d8301642026139000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduTried a few more duct geometries for IBL3 2022-01-12 17:22:19 -05003974dc01c1e06fd7ddbd954786cdc5508f95d830Tried a few more duct geometries for IBL3edittest/unit/UnitGrids/XField3D_Box_Hex_X1.cppedittest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cppedittest/unit/UnitGrids/XField3D_Box_Hex_X1.hsrc/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.h395bfaf93701bb3eae6cd173deaa6b4797f632e71642033982000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.edufix for messed up merge conflict 2022-01-12 16:33:02 -0800395bfaf93701bb3eae6cd173deaa6b4797f632e7fix for messed up merge conflicteditsrc/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.htest/unit/UnitGrids/XField3D_BoxBoundary_Quad_X1.h5d6449e9d783a788537d99df7dddc09d181abd661642034041000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edufix typo in comments 2022-01-12 19:34:01 -05005d6449e9d783a788537d99df7dddc09d181abd66fix typo in commentsedittest/unit/UnitGrids/XField3D_BoxBoundary_Quad_X1.hsrc/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.h95f231601640f45af74d99ebb3e8093d512ec1e61642048916000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.edufix for messed up merge conflict 2022-01-12 20:41:56 -080095f231601640f45af74d99ebb3e8093d512ec1e6fix for messed up merge conflicteditsrc/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.htest/sandbox/Adapt2D_DGAdvective_Euler_Joukowski_Pointwise_toy.cpp5c9fde7aa4a58b43552bf822cc9dc207ad7f02041642095704000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.eduadded checks on SANS_AVRO and SANS_REFINE 2022-01-13 09:41:44 -08005c9fde7aa4a58b43552bf822cc9dc207ad7f0204added checks on SANS_AVRO and SANS_REFINEedittest/sandbox/Adapt2D_DGAdvective_Euler_Joukowski_Pointwise_toy.cpptest/unit/UnitGrids/CMakeLists.txttest/unit/UnitGrids/XField3D_BoxBoundary_Quad_X1_btest.cpptest/unit/UnitGrids/XField3D_BoxBoundaries_Quad_X1_btest.cpptest/unit/UnitGrids/XField3D_BoxBoundaries_Quad_X1.htest/unit/UnitGrids/XField3D_BoxBoundaries_Quad_X1.cpp7a55ed195fd94c7fe07190002ada3cfe345b86111642113146000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduadd a manifold (area) grid based on four sides of a box that form a ring 2022-01-13 17:32:26 -05007a55ed195fd94c7fe07190002ada3cfe345b8611add a manifold (area) grid based on four sides of a box that form a ringedittest/unit/UnitGrids/CMakeLists.txtaddtest/unit/UnitGrids/XField3D_BoxBoundaries_Quad_X1.haddtest/unit/UnitGrids/XField3D_BoxBoundaries_Quad_X1_btest.cppaddtest/unit/UnitGrids/XField3D_BoxBoundaries_Quad_X1.cppedittest/unit/UnitGrids/XField3D_BoxBoundary_Quad_X1_btest.cppDeveloperEmailAddresses3f684038320816aa9f5ce0783db4ced279f4a6781642124710000https://acdl.mit.edu/csi/user/deanna.sewelldeanna.sewelldeanna.sewell@colorado.eduAdded deanna.sewell@colorado.edu to DeveloperEmailAddresses 2022-01-13 18:45:10 -07003f684038320816aa9f5ce0783db4ced279f4a678Added deanna.sewell@colorado.edu to DeveloperEmailAddresseseditDeveloperEmailAddressestest/unit/UnitGrids/XField3D_BoxBoundaries_Quad_X1_btest.cppad5dfba6f2b78225c0b5b1e551cc7980f2f4609b1642134235000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduadd to unit tests of BoxBoundaries grid (duct ring) 2022-01-13 23:23:55 -0500ad5dfba6f2b78225c0b5b1e551cc7980f2f4609badd to unit tests of BoxBoundaries grid (duct ring)edittest/unit/UnitGrids/XField3D_BoxBoundaries_Quad_X1_btest.cppsrc/pde/OutputCell_SolutionErrorSquared.hsrc/pde/OutputCell_SolutionErrorL2.htest/unit/pde/OutputCell_SolutionErrorL2_btest.cpptest/unit/pde/OutputCell_SolutionErrorSquared_btest.cpp44a666d9c154c1e91d8f46d9f72c02639d5160791642136225000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.edureverted OutputCell_SolutionErrorSquared to its former functionality (input is Real/VectorS, output is same); added OutputCell_SolutionErrorL2 that takes Real/VectorS and returns a scalar Real; unit tests for both 2022-01-13 20:57:05 -080044a666d9c154c1e91d8f46d9f72c02639d516079reverted OutputCell_SolutionErrorSquared to its former functionality (input is Real/VectorS,addtest/unit/pde/OutputCell_SolutionErrorL2_btest.cppeditsrc/pde/OutputCell_SolutionErrorSquared.haddsrc/pde/OutputCell_SolutionErrorL2.hedittest/unit/pde/OutputCell_SolutionErrorSquared_btest.cppsrc/pde/NS/BCNavierStokes2D_Robin_sansLG.htest/unit/pde/NS/BCNavierStokes2D_Robin_sansLG_btest.cppsrc/pde/NS/BCNavierStokes3D_Robin_sansLG.htest/unit/pde/NS/BCNavierStokes3D_Robin_sansLG_btest.cpp2dff6b5f2eeb18cd56506e964c74d2cf764620c01642190339000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.edusans-Lagrange adiabatic & isothermal no-slip BCs for NS 2022-01-14 11:58:59 -08002dff6b5f2eeb18cd56506e964c74d2cf764620c0sans-Lagrange adiabatic & isothermal no-slip BCs for NSeditsrc/pde/NS/BCNavierStokes3D_Robin_sansLG.haddtest/unit/pde/NS/BCNavierStokes2D_Robin_sansLG_btest.cppedittest/unit/pde/NS/BCNavierStokes3D_Robin_sansLG_btest.cppaddsrc/pde/NS/BCNavierStokes2D_Robin_sansLG.htest/unit/Discretization/Galerkin/JacobianCell_Galerkin_AD_ArtificialViscosity_btest.cpp51ed427a96315f6e8a80748f623cf8eddd4e06881642190527000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.edurelaxed tolerance on unit test 2022-01-14 12:02:07 -080051ed427a96315f6e8a80748f623cf8eddd4e0688relaxed tolerance on unit testedittest/unit/Discretization/Galerkin/JacobianCell_Galerkin_AD_ArtificialViscosity_btest.cppsrc/pde/AdvectionDiffusion/PDEAdvectionDiffusion2D.htest/unit/pde/Distance/PDEEikonal_Distance2D_btest.cpp9a9535c8d05223ba7c7c940d0429e91771cf99611642191668000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.edumodified speedCharacteristic for AD with zero advective flux 2022-01-14 12:21:08 -08009a9535c8d05223ba7c7c940d0429e91771cf9961modified speedCharacteristic for AD with zero advective fluxedittest/unit/pde/Distance/PDEEikonal_Distance2D_btest.cppeditsrc/pde/AdvectionDiffusion/PDEAdvectionDiffusion2D.htest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cpptest/unit/Field/Field_DG_BoundaryTrace_matchAreaCell_btest.cpptest/unit/UnitGrids/XField3D_BoxBoundary_Quad_X1.htest/unit/UnitGrids/XField3D_BoxBoundary_Quad_X1_btest.cpptest/unit/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_3D_btest.cpptest/unit/UnitGrids/XField3D_BoxBoundaries_Quad_X1.cpptest/unit/UnitGrids/XField3D_BoxBoundary_Quad_X1.cpptest/sandbox/Solve3D_CG_FP_duct_toy.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cpp03fc48c2301e446a6d1b2da8b22aaf5578f3889f1642192168000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edurefactoring of BoxBoundary grid: group indexing and area_cell to volume_boundary mapping 2022-01-14 15:29:28 -050003fc48c2301e446a6d1b2da8b22aaf5578f3889frefactoring of BoxBoundary grid: group indexing and area_cell to volume_boundary mappingedittest/unit/UnitGrids/XField3D_BoxBoundary_Quad_X1.cppedittest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cppedittest/unit/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_3D_btest.cppedittest/sandbox/Solve3D_CG_FP_duct_toy.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppedittest/unit/UnitGrids/XField3D_BoxBoundaries_Quad_X1.cppedittest/unit/UnitGrids/XField3D_BoxBoundary_Quad_X1.hedittest/unit/UnitGrids/XField3D_BoxBoundary_Quad_X1_btest.cppedittest/unit/Field/Field_DG_BoundaryTrace_matchAreaCell_btest.cpptest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_ring_toy.cpp38ec31aa2bf3224b6120837962935e059a0118f51642192238000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduadd a test case of LIP-IBL3 for IBL3 on a duct ring (i.e. 4 side walls of a box) 2022-01-14 15:30:38 -050038ec31aa2bf3224b6120837962935e059a0118f5add a test case of LIP-IBL3 for IBL3 on a duct ring (i.e. 4 side walls of a box)addtest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_ring_toy.cppsrc/pde/NS/BCNavierStokes2D.hsrc/pde/NS/BCNavierStokes2D.cppea8f4a0eeaa76c2c611dbee69f61520384b006671642202848000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.eduadded sans-Lagrange no-slip BC types to 2D NS 2022-01-14 15:27:28 -0800ea8f4a0eeaa76c2c611dbee69f61520384b00667added sans-Lagrange no-slip BC types to 2D NSeditsrc/pde/NS/BCNavierStokes2D.cppeditsrc/pde/NS/BCNavierStokes2D.hsrc/LinearAlgebra/DenseLinAlg/StaticSize/MatMul/MatrixS_MatMul_Native_MatrixS_Instantiate.cppc0bc0c528805e05c4f06bf0e9b72ffc222019b321642208032000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.eduMatrixS_MatMul instantiations needed for sans-Lagrange no-slip BCs for NS 2022-01-14 16:53:52 -0800c0bc0c528805e05c4f06bf0e9b72ffc222019b32MatrixS_MatMul instantiations needed for sans-Lagrange no-slip BCs for NSeditsrc/LinearAlgebra/DenseLinAlg/StaticSize/MatMul/MatrixS_MatMul_Native_MatrixS_Instantiate.cppCMakeInclude/Builds/BuildPETSC.cmaketest/PETSc_fixture.cppc82d1493b554131befd9144fcc3315e579905b5c1642266846000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduExplicitly only use one OpenMP thread for PETSc with MPI 2022-01-15 12:14:06 -0500c82d1493b554131befd9144fcc3315e579905b5cExplicitly only use one OpenMP thread for PETSc with MPIeditCMakeInclude/Builds/BuildPETSC.cmakeedittest/PETSc_fixture.cppsrc/LinearAlgebra/DenseLinAlg/StaticSize/MatMul/MatrixS_MatMul_Native_Surreal_Instantiate.cpp4b07c18241bb64de813aeddf6d5753818ba0c4591642312880000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.edumat-mul needed for sans-Lagrange no-slip BCs for NS 2022-01-15 22:01:20 -08004b07c18241bb64de813aeddf6d5753818ba0c459mat-mul needed for sans-Lagrange no-slip BCs for NSeditsrc/LinearAlgebra/DenseLinAlg/StaticSize/MatMul/MatrixS_MatMul_Native_Surreal_Instantiate.cppsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PiecewiseConstSourcePanel_FlatPlate3D.hd9cb4b2ca63b3004042a1bc63ee124618589f0b91642345152000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduminor refactoring 2022-01-16 09:59:12 -0500d9cb4b2ca63b3004042a1bc63ee124618589f0b9minor refactoringeditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PiecewiseConstSourcePanel_FlatPlate3D.htest/unit/IO/pde/NS/BCNavierStokes2D_Robin_sansLG_pattern.txttest/unit/IO/pde/NS/BCNavierStokes3D_Robin_sansLG_pattern.txteff964c96ba2e8fb001a729e78f924d3e18d30aa1642362580000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.eduadded IO files for sans-Lagrange no-slip BCs for NS 2022-01-16 11:49:40 -0800eff964c96ba2e8fb001a729e78f924d3e18d30aaadded IO files for sans-Lagrange no-slip BCs for NSaddtest/unit/IO/pde/NS/BCNavierStokes2D_Robin_sansLG_pattern.txtaddtest/unit/IO/pde/NS/BCNavierStokes3D_Robin_sansLG_pattern.txttest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cpp44cc992338e8ca2a127ed598e4745dcc19df2ca81642365900000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduplaying with laminar and turbulent cases for LIP+IBL3 2022-01-16 15:45:00 -050044cc992338e8ca2a127ed598e4745dcc19df2ca8playing with laminar and turbulent cases for LIP+IBL3edittest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cpp26660123822ac7fd4b53b884cb14c3f8267ed31c1642375693000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduminor cleanup 2022-01-16 18:28:13 -050026660123822ac7fd4b53b884cb14c3f8267ed31cminor cleanupedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Triangle_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cpp52c00e83269825ef757016cb43342b494edd16521642376590000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduTurned off full jacobian ping test for 3-eq IBL Quad. Also some minor clean. 2022-01-16 18:43:10 -050052c00e83269825ef757016cb43342b494edd1652Turned off full jacobian ping test for 3-eq IBL Quad. Also some minor clean.edittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Triangle_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cppd0efc54cd7750ebbc5d80d4f3cd41bdbe49d4acf1642378146000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edu Correction to last commit message: should be "Turned ON full test" 2022-01-16 19:09:06 -0500d0efc54cd7750ebbc5d80d4f3cd41bdbe49d4acfCorrection to last commit message: should be "Turned ON full test"edittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cppsrc/Discretization/HDG/IntegrandBoundaryTrace_Robin_sansLG_HDG.hsrc/Discretization/HDG/AlgebraicEquationSet_HDG.he3e6e064394287f8469f1ad51391d85172faa6a41642391541000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.educhanges to HDG FieldWeighted integral for sans-Lagrange no-slip BCs for NS; note FieldWeighted is non-functional and will throw an exception if executed 2022-01-16 19:52:21 -0800e3e6e064394287f8469f1ad51391d85172faa6a4changes to HDG FieldWeighted integral for sans-Lagrange no-slip BCs for NS; noteeditsrc/Discretization/HDG/AlgebraicEquationSet_HDG.heditsrc/Discretization/HDG/IntegrandBoundaryTrace_Robin_sansLG_HDG.hsrc/pde/NS/BCEulermitAVSensor3D.hsrc/LinearAlgebra/DenseLinAlg/DynamicSize/MatMul/MatMul_Native_Real.cppsrc/Field/NormalField/DeltaRef/ProjectDeltaRef_KDVertex.hsrc/Field/NormalField/DeltaRef/DeltaRefTable.cppsrc/Field/output_Tecplot/output_Tecplot_SA_VMSDBR2.cppsrc/Field/NormalField/NormalField.hsrc/Field/FieldBaseVolume_Instantiate.cpptest/unit/Field/NormalField_btest.cppCMakeInclude/Builds/BuildPETSC.cmakesrc/UserInterfaces/BodyForceSolver.hsrc/Field/NormalField/DeltaRef/DeltaRefStorage.hsrc/Field/CMakeLists.txtsrc/pde/NS/PDEEuler3D_RotorSource.htest/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cpptest/unit/pde/NS/PDEEulermitAVDiffusion3D_RotorSource_btest.cppsrc/Field/output_Tecplot/output_Tecplot_FieldVolume.cppsrc/BasisFunction/BasisFunctionVolume_Projection.cppsrc/Field/FieldVolume_Instantiate_3D.cppsrc/Field/NormalField/DeltaRef/DeltaRefTable.hsrc/Field/NormalField/DeltaRef/ProjectDeltaRef.cppsrc/Field/FieldVolume_DG_Cell_Instantiate_3D.cpptest/PETSc_fixture.cppsrc/Field/NormalField/DeltaRef/DeltaRefEmpty.hsrc/Field/NormalField/DeltaRef/DeltaRefStorage.cppsrc/UserInterfaces/PythonUI/PySANS_BodyForce.cppsrc/Meshing/EGADS/RotorSource/Rotor.hsrc/UserInterfaces/BodyForceSolver_impl.hsrc/BasisFunction/BasisFunctionArea_Projection.cppsrc/Field/NormalField/DeltaRef/ProjectDeltaRef.hsrc/Meshing/EGADS/RotorSource/Rotor.cppsrc/Field/NormalField/NormalField_Volume.cppsrc/Field/FieldVolume_CG_Cell_Instantiate_3D.cppae0261c705076e8f5f94407149a9eee335d244841642393307000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduAdded deltaRef for body force viscous terms 2022-01-16 23:21:47 -0500ae0261c705076e8f5f94407149a9eee335d24484Added deltaRef for body force viscous termseditsrc/UserInterfaces/BodyForceSolver_impl.haddsrc/Field/NormalField/DeltaRef/DeltaRefEmpty.heditsrc/BasisFunction/BasisFunctionArea_Projection.cppaddsrc/Field/output_Tecplot/output_Tecplot_SA_VMSDBR2.cppeditsrc/Meshing/EGADS/RotorSource/Rotor.heditsrc/LinearAlgebra/DenseLinAlg/DynamicSize/MatMul/MatMul_Native_Real.cppeditsrc/Field/output_Tecplot/output_Tecplot_FieldVolume.cppeditsrc/pde/NS/BCEulermitAVSensor3D.heditsrc/UserInterfaces/BodyForceSolver.heditCMakeInclude/Builds/BuildPETSC.cmakeeditsrc/Field/FieldVolume_CG_Cell_Instantiate_3D.cppeditsrc/Field/CMakeLists.txtaddsrc/Field/NormalField/DeltaRef/DeltaRefStorage.cppeditsrc/Meshing/EGADS/RotorSource/Rotor.cppeditsrc/UserInterfaces/PythonUI/PySANS_BodyForce.cppedittest/PETSc_fixture.cppeditsrc/Field/FieldVolume_DG_Cell_Instantiate_3D.cppaddsrc/Field/NormalField/DeltaRef/DeltaRefTable.heditsrc/Field/NormalField/NormalField.haddsrc/Field/NormalField/DeltaRef/ProjectDeltaRef.cppedittest/unit/Field/NormalField_btest.cppeditsrc/BasisFunction/BasisFunctionVolume_Projection.cppaddsrc/Field/NormalField/DeltaRef/DeltaRefTable.cppedittest/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cppeditsrc/Field/FieldBaseVolume_Instantiate.cppeditsrc/pde/NS/PDEEuler3D_RotorSource.haddsrc/Field/NormalField/DeltaRef/DeltaRefStorage.heditsrc/Field/NormalField/NormalField_Volume.cppedittest/unit/pde/NS/PDEEulermitAVDiffusion3D_RotorSource_btest.cppaddsrc/Field/NormalField/DeltaRef/ProjectDeltaRef.heditsrc/Field/FieldVolume_Instantiate_3D.cppaddsrc/Field/NormalField/DeltaRef/ProjectDeltaRef_KDVertex.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PiecewiseConstSourcePanel_FlatPlate3D.htest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cppb6c5cd6e236197bec9660e60eb5aa0f13d4bc80c1642394343000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edusome cleanup on panel-IBL3 sandbox case 2022-01-16 23:39:03 -0500b6c5cd6e236197bec9660e60eb5aa0f13d4bc80csome cleanup on panel-IBL3 sandbox caseedittest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cppeditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PiecewiseConstSourcePanel_FlatPlate3D.hsrc/Field/NormalField/DeltaRef/DeltaRefStorage.cppsrc/Field/NormalField/DeltaRef/DeltaRefTable.h1df02214ccc8f8fcc80f241a38901738b25e82841642396853000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduAdd missing includes 2022-01-17 00:20:53 -05001df02214ccc8f8fcc80f241a38901738b25e8284Add missing includeseditsrc/Field/NormalField/DeltaRef/DeltaRefTable.heditsrc/Field/NormalField/DeltaRef/DeltaRefStorage.cppsrc/LinearAlgebra/DenseLinAlg/DynamicSize/MatrixD_InverseLU_Real_Instantiate.cpp73f08b78d1eea94d28f45c41f48b11f3277489dd1642397049000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduForgot a file 2022-01-17 00:24:09 -050073f08b78d1eea94d28f45c41f48b11f3277489ddForgot a fileeditsrc/LinearAlgebra/DenseLinAlg/DynamicSize/MatrixD_InverseLU_Real_Instantiate.cpptest/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cppsrc/pde/NS/PDEEuler3D_RotorSource.hc8344c7494bafbe5ce762b8f134f9a8e90a8f7921642397922000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduSeparate constant and quadratic body force viscous terms 2022-01-17 00:38:42 -0500c8344c7494bafbe5ce762b8f134f9a8e90a8f792Separate constant and quadratic body force viscous termsedittest/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cppeditsrc/pde/NS/PDEEuler3D_RotorSource.htest/unit/UnitGrids/XField3D_BoxBoundaries_Quad_X1.htest/sandbox/Solve3D_CG_FP_duct_toy.cpp3db281a7927eaa2d407c7290845d16a081c858151642398075000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edufixed compile error and warning 2022-01-17 00:41:15 -05003db281a7927eaa2d407c7290845d16a081c85815fixed compile error and warningedittest/unit/UnitGrids/XField3D_BoxBoundaries_Quad_X1.hedittest/sandbox/Solve3D_CG_FP_duct_toy.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Triangle_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cpp3f8b4bc37837f8bce150c561dabf0b95e0d6b6b01642398491000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduTurned on full jacobian ping test for coupled panel+IBL3 (3-eq) 2022-01-17 00:48:11 -05003f8b4bc37837f8bce150c561dabf0b95e0d6b6b0Turned on full jacobian ping test for coupled panel+IBL3 (3-eq)edittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Triangle_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cppa397fada072b871613b0c3575ee74054278c8db01642398928000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduTurned on more jacobian ping test 2022-01-17 00:55:28 -0500a397fada072b871613b0c3575ee74054278c8db0Turned on more jacobian ping testedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cpptest/unit/Field/Field3D_CG_Tetrahedron_btest.cppsrc/Field/FieldVolume_CG_Cell_Instantiate_3D.cpp65c146f2c43be26dae4754997c4822e269926de71642431767000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFix link error 2022-01-17 10:02:47 -050065c146f2c43be26dae4754997c4822e269926de7Fix link erroreditsrc/Field/FieldVolume_CG_Cell_Instantiate_3D.cppedittest/unit/Field/Field3D_CG_Tetrahedron_btest.cppsrc/NonLinearSolver/NewtonSolver_impl.h732494376372c4df1e20729a604e336fa599ba141642434962000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFix Newton iteration separator 2022-01-17 10:56:02 -0500732494376372c4df1e20729a604e336fa599ba14Fix Newton iteration separatoreditsrc/NonLinearSolver/NewtonSolver_impl.hsrc/pde/NS/PDEEuler3D_RotorSource.htest/unit/pde/NS/PDEEuler3D_RotorSource_btest.cppcb95211397d6a660c987ed7e582ba3200b17963e1642436445000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduUpdate unit test 2022-01-17 11:20:45 -0500cb95211397d6a660c987ed7e582ba3200b17963eUpdate unit testedittest/unit/pde/NS/PDEEuler3D_RotorSource_btest.cppeditsrc/pde/NS/PDEEuler3D_RotorSource.htest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cppcd7e4f9af3e8039c6324601f796e2d6e45969f2b1642437454000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edurefactored panel-IBL3 case running setup 2022-01-17 11:37:34 -0500cd7e4f9af3e8039c6324601f796e2d6e45969f2brefactored panel-IBL3 case running setupedittest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cppsrc/pde/IBL/ElementProjectionOutputIBL3D.hea495a3512a0e298daf3a81cde804e5158b9a68b1642438142000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduOutput IBL results of mass defect flux in lieu of dummy output of qz_X 2022-01-17 11:49:02 -0500ea495a3512a0e298daf3a81cde804e5158b9a68bOutput IBL results of mass defect flux in lieu of dummy output of qz_Xeditsrc/pde/IBL/ElementProjectionOutputIBL3D.hsrc/Discretization/HDG/IntegrandBoundaryTrace_Robin_sansLG_HDG.h25849cbc3d23a9f572e4732f7661e93d1c0c92681642440494000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.edubug fix: consistent definition of w and b fields in FieldWeighted 2022-01-17 09:28:14 -080025849cbc3d23a9f572e4732f7661e93d1c0c9268bug fix: consistent definition of w and b fields in FieldWeightededitsrc/Discretization/HDG/IntegrandBoundaryTrace_Robin_sansLG_HDG.htest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cpptest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_ring_toy.cpptest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cpp6775629208e260c6dcb411ba1906c2fa3ef1c7791642442397000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduRefactored sandbox case setup: panel-IBL3, LIP-IBL3 2022-01-17 12:59:57 -05006775629208e260c6dcb411ba1906c2fa3ef1c779Refactored sandbox case setup: panel-IBL3, LIP-IBL3edittest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cppedittest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cppedittest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_ring_toy.cpptest/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cppf3377a25047480705f6ebd627babc740c25a88141642446749000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduForgot to suppress one output 2022-01-17 14:12:29 -0500f3377a25047480705f6ebd627babc740c25a8814Forgot to suppress one outputedittest/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cppsrc/UserInterfaces/BodyForceSolver_impl.hf6ebae0728c43360f7767e2b1a3f590560e5cf401642451888000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduReturn results from Constrained body force solver 2022-01-17 15:38:08 -0500f6ebae0728c43360f7767e2b1a3f590560e5cf40Return results from Constrained body force solvereditsrc/UserInterfaces/BodyForceSolver_impl.htest/unit/UnitGrids/XField3D_Box_Hex_X1.cpp24078d245119de5e1f7a87c0cec12d8acf80d0fb1642452697000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edufix style 2022-01-17 15:51:37 -050024078d245119de5e1f7a87c0cec12d8acf80d0fbfix styleedittest/unit/UnitGrids/XField3D_Box_Hex_X1.cppsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PiecewiseConstSourcePanel_FlatPlate3D.htest/unit/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PiecewiseConstSourcePanel_FlatPlate3D_Quad_btest.cppsrc/Discretization/Galerkin/IntegrandCell_ProjectFunction.htest/unit/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_3D_btest.cpptest/unit/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PiecewiseConstSourcePanel_FlatPlate3D_Triangle_btest.cppdce13cb65d9a0f0fc93c0c3b4f75135da3d942621642456277000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edurefactor and unit test Auxv equation for 3D flate plate panel 2022-01-17 16:51:17 -0500dce13cb65d9a0f0fc93c0c3b4f75135da3d94262refactor and unit test Auxv equation for 3D flate plate paneladdtest/unit/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PiecewiseConstSourcePanel_FlatPlate3D_Triangle_btest.cppeditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PiecewiseConstSourcePanel_FlatPlate3D.hedittest/unit/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_3D_btest.cppaddtest/unit/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PiecewiseConstSourcePanel_FlatPlate3D_Quad_btest.cppeditsrc/Discretization/Galerkin/IntegrandCell_ProjectFunction.htest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cpp2e6e3afbd0588d5da919730e3f93c84d2096d2bc1642456294000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduminor cleanup 2022-01-17 16:51:34 -05002e6e3afbd0588d5da919730e3f93c84d2096d2bcminor cleanupedittest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cppsrc/PanelMethod/FunctionEvalQauxv_IBL_PiecewiseConstSourcePanel_FlatPlate3D.hsrc/PanelMethod/PiecewiseConstSourcePanel_FlatPlate3D.htest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cpptest/unit/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PiecewiseConstSourcePanel_FlatPlate3D_Triangle_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Triangle_btest.cppsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PiecewiseConstSourcePanel_FlatPlate3D.htest/unit/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PiecewiseConstSourcePanel_FlatPlate3D_Quad_btest.cpptest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cpp8db5073e006ea5a8d361f8fa4c5538b4f27c65461642458115000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduRefactor Auxv equation of 3D flat plate panel method to allow for CG p1 qauxvfld for better DOF efficiency 2022-01-17 17:21:55 -05008db5073e006ea5a8d361f8fa4c5538b4f27c6546Refactor Auxv equation of 3D flat plate panel method to allow for CG p1 qauxvfld for better DOF efficiencyedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cppeditsrc/PanelMethod/PiecewiseConstSourcePanel_FlatPlate3D.heditsrc/PanelMethod/FunctionEvalQauxv_IBL_PiecewiseConstSourcePanel_FlatPlate3D.hedittest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cppedittest/unit/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PiecewiseConstSourcePanel_FlatPlate3D_Triangle_btest.cppeditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PiecewiseConstSourcePanel_FlatPlate3D.hedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Triangle_btest.cppedittest/unit/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PiecewiseConstSourcePanel_FlatPlate3D_Quad_btest.cppsrc/Field/NormalField/DeltaRef/DeltaRefStorage.cpp17c13cb2768929667ae9d275d0442359feedfb761642458581000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFix bug in deltaRef reduction process 2022-01-17 17:29:41 -050017c13cb2768929667ae9d275d0442359feedfb76Fix bug in deltaRef reduction processeditsrc/Field/NormalField/DeltaRef/DeltaRefStorage.cpptest/sandbox/Adapt2D_DGAdvective_Euler_Joukowski_Pointwise_toy.cppsrc/Discretization/Potential_Adjoint/IntegrandBoundaryTrace_WakeCut_CG_FP_Virtual.htest/unit/pde/OutputCell_SolutionErrorSquared_btest.cpptest/unit/pde/OutputCell_SolutionErrorL2_btest.cppba4fc5b3092ad1eff7e165ec171f3f16aad6a0331642479414000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.edufix warning messages 2022-01-17 20:16:54 -0800ba4fc5b3092ad1eff7e165ec171f3f16aad6a033fix warning messagesedittest/sandbox/Adapt2D_DGAdvective_Euler_Joukowski_Pointwise_toy.cppedittest/unit/pde/OutputCell_SolutionErrorSquared_btest.cppedittest/unit/pde/OutputCell_SolutionErrorL2_btest.cppeditsrc/Discretization/Potential_Adjoint/IntegrandBoundaryTrace_WakeCut_CG_FP_Virtual.htest/unit/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PiecewiseConstSourcePanel_FlatPlate3D_Quad_btest.cpp41f40739ed137be339bd0dc4d4ca2c71723624011642482868000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduminor cleanup 2022-01-18 00:14:28 -050041f40739ed137be339bd0dc4d4ca2c7172362401minor cleanupedittest/unit/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PiecewiseConstSourcePanel_FlatPlate3D_Quad_btest.cpptest/unit/PanelMethod/PiecewiseConstSourcePanel_FlatPlate3D_btest.cppsrc/PanelMethod/PiecewiseConstSourcePanel_FlatPlate3D.h8f1e0b4ceb2e5a4afd3553a9f91364e32f54f7921642487789000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edubug fix: 3D panel method with triangle panels was computing panel area wrongly by double-multiplying reference area. Added unit tests for this panel method 2022-01-18 01:36:29 -05008f1e0b4ceb2e5a4afd3553a9f91364e32f54f792bug fix: 3D panel method with triangle panels was computing panel area wrongly by double-multiplying reference area. Added unit tests for this panel methodaddtest/unit/PanelMethod/PiecewiseConstSourcePanel_FlatPlate3D_btest.cppeditsrc/PanelMethod/PiecewiseConstSourcePanel_FlatPlate3D.htest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cpptest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_ring_toy.cpptest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cppf6f829c60abc8807be0add07e3996b83f11ec3371642489072000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edufix compile errors caused by typos and lag behind previous refactoring 2022-01-18 01:57:52 -0500f6f829c60abc8807be0add07e3996b83f11ec337fix compile errors caused by typos and lag behind previous refactoringedittest/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cppedittest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cppedittest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_ring_toy.cpptest/unit/PanelMethod/PiecewiseConstSourcePanel_FlatPlate3D_btest.cpp152863934b77fe9de6c8e1038888d0225b9a7b9f1642519992000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edufix style for Vera check 2022-01-18 10:33:12 -0500152863934b77fe9de6c8e1038888d0225b9a7b9ffix style for Vera checkedittest/unit/PanelMethod/PiecewiseConstSourcePanel_FlatPlate3D_btest.cpptest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cppe910f6789b525d84243ed6866e6e80bc280da7e21642522724000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduminor cleanup of sandbox case 2022-01-18 11:18:44 -0500e910f6789b525d84243ed6866e6e80bc280da7e2minor cleanup of sandbox caseedittest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cppsrc/Discretization/Potential_Adjoint/IntegrandBoundaryTrace_WakeCut_CG_FP_Virtual.h92395ebe42af7518a3acca94f07e3041fc844ecf1642525773000https://acdl.mit.edu/csi/user/allmarasallmarasallmaras@mit.edumore warning messages 2022-01-18 09:09:33 -080092395ebe42af7518a3acca94f07e3041fc844ecfmore warning messageseditsrc/Discretization/Potential_Adjoint/IntegrandBoundaryTrace_WakeCut_CG_FP_Virtual.htest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cpptest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_ring_toy.cpp185901f2c8439c04af21f4025864f0b793d9a0561642526435000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edufix warnings: comparing int and size_t in for loop 2022-01-18 12:20:35 -0500185901f2c8439c04af21f4025864f0b793d9a056fix warnings: comparing int and size_t in for loopedittest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cppedittest/sandbox/Solve3D_Coupled_LIP_IBL3_duct_ring_toy.cpptest/unit/PanelMethod/PiecewiseConstSourcePanel_FlatPlate3D_btest.cpptest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cpp3bc857b3ef351556e5982f4164a11047107153041642537512000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edurelaxed tolerance for intel 2022-01-18 15:25:12 -05003bc857b3ef351556e5982f4164a1104710715304relaxed tolerance for inteledittest/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cppedittest/unit/PanelMethod/PiecewiseConstSourcePanel_FlatPlate3D_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cpptest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cpp596cae7fbcabe780c221545c2d02cd3b646b76c21642566953000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edufix duplicated BOOST test suite names 2022-01-18 23:35:53 -0500596cae7fbcabe780c221545c2d02cd3b646b76c2fix duplicated BOOST test suite namesedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cppedittest/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cppsrc/Field/DistanceFunction/DistanceFunction.cpp08c9d7db22774b0744dece5775d71a491506001b1642609169000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduAllow for no-wall distance functions 2022-01-19 11:19:29 -050008c9d7db22774b0744dece5775d71a491506001bAllow for no-wall distance functionseditsrc/Field/DistanceFunction/DistanceFunction.cppexternal/libMeshb/libMeshb7/libmeshb7.hexternal/libMeshb/libMeshb7/libmeshb7.csrc/Meshing/libMeshb/libMeshbToSANS.cpptest/unit/Meshing/libMeshb/XField_libMeshb_btest.cppsrc/Meshing/libMeshb/WriteMesh_libMeshb.cppsrc/Meshing/libMeshb/CMakeLists.txtexternal/CMakeLists.txtsrc/Meshing/libMeshb/libMeshbToSANS.hexternal/libMeshb/libMeshb7/libmeshb7.inssrc/Meshing/libMeshb/XFieldVolume_libMeshb.cpp410392977e77c8b8d85a398053b3934dd3a8035c1642625261000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduSupport 3D Q2 meshes with libMeshb 2022-01-19 15:47:41 -0500410392977e77c8b8d85a398053b3934dd3a8035cSupport 3D Q2 meshes with libMeshbeditsrc/Meshing/libMeshb/CMakeLists.txteditexternal/libMeshb/libMeshb7/libmeshb7.inseditexternal/libMeshb/libMeshb7/libmeshb7.caddsrc/Meshing/libMeshb/libMeshbToSANS.cppedittest/unit/Meshing/libMeshb/XField_libMeshb_btest.cppeditsrc/Meshing/libMeshb/WriteMesh_libMeshb.cppeditexternal/libMeshb/libMeshb7/libmeshb7.heditexternal/CMakeLists.txtaddsrc/Meshing/libMeshb/libMeshbToSANS.heditsrc/Meshing/libMeshb/XFieldVolume_libMeshb.cppsrc/pde/IBL/PDEIBLFourEqn3D.h3a930ea89de8652e3d4f8252145006860ac035ed1642631567000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.educhanged full upwind back to using momentum flux correction by default 2022-01-19 17:32:47 -05003a930ea89de8652e3d4f8252145006860ac035edchanged full upwind back to using momentum flux correction by defaulteditsrc/pde/IBL/PDEIBLFourEqn3D.hsrc/Meshing/libMeshb/WriteMesh_libMeshb.cpp08c11a7494a25f2eff422b30fbc77a0b088d5bd51642637090000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFix warning 2022-01-19 19:04:50 -050008c11a7494a25f2eff422b30fbc77a0b088d5bd5Fix warningeditsrc/Meshing/libMeshb/WriteMesh_libMeshb.cppsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_impl.h9ff2c2b80b88bff40ca616c73d5210aa5ee4c6071642706098000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduUse KSPGMRESModifiedGramSchmidtOrthogonalization which is slower but more stable 2022-01-20 14:14:58 -05009ff2c2b80b88bff40ca616c73d5210aa5ee4c607Use KSPGMRESModifiedGramSchmidtOrthogonalization which is slower but more stableeditsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_impl.hsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_impl.hf98c0ba0fa905d5993a87b69dc41178a352eee651642708584000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFormat fix 2022-01-20 14:56:24 -0500f98c0ba0fa905d5993a87b69dc41178a352eee65Format fixeditsrc/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_impl.htest/unit/Field/Project_DG_to_CG_btest.cpp0bbc9c65c654ba5549a215cba5c7b89a677851291642713379000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduRelax tolerance 2022-01-20 16:16:19 -05000bbc9c65c654ba5549a215cba5c7b89a67785129Relax toleranceedittest/unit/Field/Project_DG_to_CG_btest.cppsrc/Discretization/Galerkin/AlgebraicEquationSet_Project.hsrc/pde/IBL/PDEIBL3D.hsrc/pde/IBL/PDEIBL2D.hsrc/Discretization/DG/AlgebraicEquationSet_DGBR2.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi.hsrc/Discretization/HDG/AlgebraicEquationSet_HDGAdvective.hsrc/Discretization/DG/AlgebraicEquationSet_TransitionIBL.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PiecewiseConstSourcePanel_FlatPlate3D.hsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_3D.hsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_BCDataField.hsrc/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_CutcellTransitionIBL.hsrc/pde/IBL/PDEIBLSplitAmpLag2D.cppsrc/pde/IBL/ProjectToQauxi3D.hsrc/pde/IBL/ProjectToQauxi2D.hsrc/pde/IBL/PDEIBLUniField.hsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin.hsrc/pde/IBL/PDEIBLFourEqn3D.hsrc/pde/IBL/PDEIBLSplitAmpLag2D.hsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective.h2cd70d576831dbb169bc5123b4db81168368523c1642805630000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edufixed undefined symbol/linking errors. static const member needs to be define in cpp, strictly speaking. clang compiler was rigorous enough to catch this, although gnu lets it pass... 2022-01-21 16:53:50 -06002cd70d576831dbb169bc5123b4db81168368523cfixed undefined symbol/linking errors. static const member needs to be define in cpp, strictly speaking. clang compiler was rigorous enough to catch this, although gnu lets it pass...editsrc/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_CutcellTransitionIBL.heditsrc/Discretization/DG/AlgebraicEquationSet_TransitionIBL.heditsrc/pde/IBL/PDEIBLUniField.heditsrc/Discretization/DG/AlgebraicEquationSet_DGBR2.heditsrc/pde/IBL/ProjectToQauxi3D.heditsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective.heditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxi.heditsrc/pde/IBL/PDEIBL3D.heditsrc/pde/IBL/PDEIBLFourEqn3D.heditsrc/Discretization/HDG/AlgebraicEquationSet_HDGAdvective.heditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PiecewiseConstSourcePanel_FlatPlate3D.heditsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin.heditsrc/pde/IBL/PDEIBL2D.heditsrc/Discretization/Galerkin/AlgebraicEquationSet_Project.heditsrc/pde/IBL/PDEIBLSplitAmpLag2D.cppeditsrc/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_BCDataField.heditsrc/pde/IBL/PDEIBLSplitAmpLag2D.heditsrc/pde/IBL/ProjectToQauxi2D.heditsrc/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_3D.hsrc/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_CutcellTransitionIBL.hsrc/Discretization/DG/AlgebraicEquationSet_TransitionIBL.hsrc/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_impl.hsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective_impl.hb31e84a770e7b3f7b677406af1d1fe14f32f3a3c1642822152000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.edufixed compile warnings about comparing int and unsigned int 2022-01-21 21:29:12 -0600b31e84a770e7b3f7b677406af1d1fe14f32f3a3cfixed compile warnings about comparing int and unsigned inteditsrc/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_CutcellTransitionIBL.heditsrc/Discretization/DG/AlgebraicEquationSet_TransitionIBL.heditsrc/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_impl.heditsrc/Discretization/DG/AlgebraicEquationSet_DGAdvective_impl.hsrc/Field/NormalField/ProfileLoss/ProfileLossStorage.hsrc/UserInterfaces/BodyForceSolverParam.hxxsrc/Field/NormalField/ProfileLoss/ProfileLossStorage.cppsrc/Field/NormalField/DeltaRef/ProjectDeltaRef.cppsrc/Field/NormalField/ProfileLoss/ProfileLoss.cppsrc/UserInterfaces/BodyForceSolver.hsrc/Field/NormalField/DeltaRef/DeltaRefStorage.hsrc/Field/CMakeLists.txtsrc/Field/NormalField/DeltaRef/DeltaRefStorage.cppsrc/UserInterfaces/PythonUI/PySANS_BodyForce.cppsrc/Meshing/EGADS/RotorSource/Rotor.hsrc/UserInterfaces/BodyForceSolver_impl.hsrc/Field/NormalField/ProfileLoss/ProfileLoss.hsrc/Meshing/EGADS/RotorSource/Rotor.cpp3b185b235282cae456e91972a2d8962dfd0fccf61642871245000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFirst attempt at extracting Profile Loss for body forces 2022-01-22 12:07:25 -05003b185b235282cae456e91972a2d8962dfd0fccf6First attempt at extracting Profile Loss for body forceseditsrc/UserInterfaces/BodyForceSolver.haddsrc/Field/NormalField/ProfileLoss/ProfileLossStorage.haddsrc/Field/NormalField/ProfileLoss/ProfileLoss.heditsrc/Field/CMakeLists.txtaddsrc/UserInterfaces/BodyForceSolverParam.hxxaddsrc/Field/NormalField/ProfileLoss/ProfileLoss.cppeditsrc/Field/NormalField/DeltaRef/DeltaRefStorage.cppeditsrc/Meshing/EGADS/RotorSource/Rotor.heditsrc/UserInterfaces/BodyForceSolver_impl.heditsrc/Meshing/EGADS/RotorSource/Rotor.cppeditsrc/Field/NormalField/DeltaRef/ProjectDeltaRef.cppeditsrc/UserInterfaces/PythonUI/PySANS_BodyForce.cppeditsrc/Field/NormalField/DeltaRef/DeltaRefStorage.haddsrc/Field/NormalField/ProfileLoss/ProfileLossStorage.cpptest/unit/IO/pde/IBL/PDEIBLFourEqn3D_pattern.txttest/unit/pde/IBL/PDEIBLFourEqn3D_btest.cpp6073a7de35a6a20fd513c6b403ee82f9376212301642872332000https://acdl.mit.edu/csi/user/shunzshunzshunz@mit.eduadd unit tests for better coverage 2022-01-22 12:25:32 -05006073a7de35a6a20fd513c6b403ee82f937621230add unit tests for better coverageaddtest/unit/IO/pde/IBL/PDEIBLFourEqn3D_pattern.txtedittest/unit/pde/IBL/PDEIBLFourEqn3D_btest.cppsrc/Meshing/EGADS/RotorSource/Rotor.cpp270e0bb4c1710b6811f212fe2607e1ffdefd0c661642873109000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduForgot to update checkInputs 2022-01-22 12:38:29 -0500270e0bb4c1710b6811f212fe2607e1ffdefd0c66Forgot to update checkInputseditsrc/Meshing/EGADS/RotorSource/Rotor.cppsrc/Field/NormalField/ProfileLoss/ProfileLossStorage.cppsrc/Field/NormalField/ProfileLoss/ProfileLoss.cpp26d733b41346c596c3beea20a8047613b02d6d341642882749000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduMore profile loss fixes 2022-01-22 15:19:09 -050026d733b41346c596c3beea20a8047613b02d6d34More profile loss fixeseditsrc/Field/NormalField/ProfileLoss/ProfileLossStorage.cppeditsrc/Field/NormalField/ProfileLoss/ProfileLoss.cppsrc/pde/NS/PDEEuler3D_RotorSource.hc3fa0fe8fab0f29d22fcd80d58dd7ec881936c831642886577000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduUse Yuankang Chen data fit value for body force delta**2 term 2022-01-22 16:22:57 -0500c3fa0fe8fab0f29d22fcd80d58dd7ec881936c83Use Yuankang Chen data fit value for body force delta**2 termeditsrc/pde/NS/PDEEuler3D_RotorSource.hsrc/Field/NormalField/ProfileLoss/ProfileLoss.cppsrc/UserInterfaces/BodyForceSolver_impl.htest/unit/pde/NS/PDEEuler3D_RotorSource_btest.cpptest/unit/pde/NS/PDEEulermitAVDiffusion3D_RotorSource_btest.cppf4c0a4ae7e942afd9ece0ac3fa9128e6d3d00dd91642907949000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduFixes for profile loss 2022-01-22 22:19:09 -0500f4c0a4ae7e942afd9ece0ac3fa9128e6d3d00dd9Fixes for profile losseditsrc/Field/NormalField/ProfileLoss/ProfileLoss.cppeditsrc/UserInterfaces/BodyForceSolver_impl.hedittest/unit/pde/NS/PDEEuler3D_RotorSource_btest.cppedittest/unit/pde/NS/PDEEulermitAVDiffusion3D_RotorSource_btest.cppscripts/cppcheck/suppressions.txtsrc/Field/Partition/LagrangeElementGroup.cppsrc/Field/NormalField/ProfileLoss/ProfileLoss.cppa63291d552674f86c89d8cbd5101102d049234e01642959874000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduCppcheck suppressions and Profile loss computed at constant radius 2022-01-23 12:44:34 -0500a63291d552674f86c89d8cbd5101102d049234e0Cppcheck suppressions and Profile loss computed at constant radiuseditsrc/Field/Partition/LagrangeElementGroup.cppeditsrc/Field/NormalField/ProfileLoss/ProfileLoss.cppeditscripts/cppcheck/suppressions.txtsrc/Field/NormalField/ProfileLoss/ProfileLoss.cppc471f0653df4916a0086f2fab82bad5ed9b247891642980638000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduOne more try at profile loss 2022-01-23 18:30:38 -0500c471f0653df4916a0086f2fab82bad5ed9b24789One more try at profile losseditsrc/Field/NormalField/ProfileLoss/ProfileLoss.cppsrc/Discretization/VMSDBR2/IntegrandBoundaryTrace_Flux_mitState_VMSD_BR2.hsrc/Meshing/EGADS/solidBoolean.hsrc/Discretization/VMSDBR2/IntegrandTrace_VMSD_BR2.hsrc/Discretization/VMSDBR2/IntegrandBoundaryTrace_Dirichlet_sansLG_VMSD_BR2.htest/system/LocalSolve/Constrained_Solve_btest.cppsrc/Discretization/VMSDBR2/IntegrandBoundaryTrace_LinearScalar_sansLG_VMSD_BR2.hsrc/Discretization/VMSDBR2/IntegrandBoundaryTrace_Dirichlet_mitLG_VMSD_BR2.hsrc/Discretization/Galerkin/IntegrandBoundaryTrace_Flux_mitState_Nitsche.hsrc/Field/ProjectSoln/Project_DG_to_CG/Project_DG_to_CG_impl.hsrc/Discretization/VMSDBR2/IntegrandBoundaryTrace_LinearScalar_mitLG_VMSD_BR2.h7ed4b217c0007ac7c29873f5706c87c22f94a7ac1643084268000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.eduStart removing perturbed stuff 2022-01-24 23:17:48 -05007ed4b217c0007ac7c29873f5706c87c22f94a7acStart removing perturbed stuffeditsrc/Discretization/Galerkin/IntegrandBoundaryTrace_Flux_mitState_Nitsche.heditsrc/Discretization/VMSDBR2/IntegrandBoundaryTrace_Flux_mitState_VMSD_BR2.heditsrc/Discretization/VMSDBR2/IntegrandBoundaryTrace_Dirichlet_mitLG_VMSD_BR2.heditsrc/Discretization/VMSDBR2/IntegrandBoundaryTrace_LinearScalar_sansLG_VMSD_BR2.heditsrc/Discretization/VMSDBR2/IntegrandBoundaryTrace_Dirichlet_sansLG_VMSD_BR2.heditsrc/Field/ProjectSoln/Project_DG_to_CG/Project_DG_to_CG_impl.heditsrc/Discretization/VMSDBR2/IntegrandTrace_VMSD_BR2.heditsrc/Discretization/VMSDBR2/IntegrandBoundaryTrace_LinearScalar_mitLG_VMSD_BR2.heditsrc/Meshing/EGADS/solidBoolean.hedittest/system/LocalSolve/Constrained_Solve_btest.cppscripts/cppcheck/suppressions.txtsrc/Quadrature/Quadrature_Simplex_StroudConical.cpped4346548d3bfc8e7a5c27e1ff83120fa24d92ad1643084615000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.educppcheck fix and suppression 2022-01-24 23:23:35 -0500ed4346548d3bfc8e7a5c27e1ff83120fa24d92adcppcheck fix and suppressioneditsrc/Quadrature/Quadrature_Simplex_StroudConical.cppeditscripts/cppcheck/suppressions.txtsrc/Meshing/avro/XField_avro_impl.htest/unit/Optimization/Problems/Truss/JacobianConstraint_Truss_btest.cpptest/unit/UnitGrids/XField3D_BoxBoundaries_Quad_X1.cpptest/unit/UnitGrids/XField4D_Box_Pentatope_X1.cppe9117b6063df0d5c24390a782e66a0834c7c1d9c1643086968000https://acdl.mit.edu/csi/user/galbramcgalbramcgalbramc@mit.educlang analyzer fixes 2022-01-25 00:02:48 -0500e9117b6063df0d5c24390a782e66a0834c7c1d9cclang analyzer 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