Started by upstream project "TransportMaps-private-develop" build number 74
originally caused by:
 Started by BitBucket push by dabi86
 Started by BitBucket push by dabi86
Running as SYSTEM
[EnvInject] - Loading node environment variables.
Building remotely on reynolds-ubuntu14 in workspace /home/jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds-ubuntu14/PYTHON_EXE/python2/VENV_SYS/virtualenv
[WS-CLEANUP] Deleting project workspace...
[WS-CLEANUP] Deferred wipeout is used...
[WS-CLEANUP] Done
No credentials specified
Cloning the remote Git repository
Cloning repository git@bitbucket.org:dabi86/transportmaps-private.git
 > git init /home/jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds-ubuntu14/PYTHON_EXE/python2/VENV_SYS/virtualenv # timeout=10
Fetching upstream changes from git@bitbucket.org:dabi86/transportmaps-private.git
 > git --version # timeout=10
 > git fetch --tags --progress git@bitbucket.org:dabi86/transportmaps-private.git +refs/heads/*:refs/remotes/origin/* # timeout=10
 > git config remote.origin.url git@bitbucket.org:dabi86/transportmaps-private.git # timeout=10
 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10
 > git config remote.origin.url git@bitbucket.org:dabi86/transportmaps-private.git # timeout=10
Fetching upstream changes from git@bitbucket.org:dabi86/transportmaps-private.git
 > git fetch --tags --progress git@bitbucket.org:dabi86/transportmaps-private.git +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision f790e50519270b5109ce3b00654e479f40cdc787 (refs/remotes/origin/develop/master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f f790e50519270b5109ce3b00654e479f40cdc787 # timeout=10
Commit message: "updated jenkins script"
 > git rev-list --no-walk b909bc6544cc32e1ecd387d9a9e7771d271e8a22 # timeout=10
[virtualenv] $ /bin/bash -xe /tmp/jenkins4382196082207731997.sh
+ bash -ex jenkins/test-source.sh
+ set -e
++ pwd
+ ROOT=/home/jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds-ubuntu14/PYTHON_EXE/python2/VENV_SYS/virtualenv
++ cut -d / -f 1
++ echo TransportMaps-private-develop/COMPILER=clang,MACHINE=reynolds-ubuntu14,PYTHON_EXE=python2,VENV_SYS=virtualenv
+ TEST_NAME=TransportMaps-private-develop
+ ENV_NAME=venv_TransportMaps-private-develop_python2
+ VENV_OPTS=
+ [[ TransportMaps-private-develop == *\m\p\i* ]]
+ TTYPE=serial
+ MPI=False
++ hostname
+ [[ reynolds-ubuntu14 == *\m\a\c\y\s* ]]
++ hostname
+ [[ reynolds-ubuntu14 == \m\a\c\y\s\-\S\i\e\r\r\a ]]
++ hostname
+ [[ reynolds-ubuntu14 == *\r\e\y\n\o\l\d\s* ]]
+ export PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/home/jenkins/bin
+ PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/home/jenkins/bin
+ export PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/home/jenkins/bin:/home/jenkins/.local/bin
+ PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/home/jenkins/bin:/home/jenkins/.local/bin
+ '[' virtualenv = virtualenv ']'
+ rm -rf venv_TransportMaps-private-develop_python2
+ virtualenv --python=python2 venv_TransportMaps-private-develop_python2
New python executable in /home/jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds-ubuntu14/PYTHON_EXE/python2/VENV_SYS/virtualenv/venv_TransportMaps-private-develop_python2/bin/python2
Also creating executable in /home/jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds-ubuntu14/PYTHON_EXE/python2/VENV_SYS/virtualenv/venv_TransportMaps-private-develop_python2/bin/python
Installing setuptools, pip, wheel...
done.
Running virtualenv with interpreter /usr/bin/python2
+ source venv_TransportMaps-private-develop_python2/bin/activate
++ deactivate nondestructive
++ unset -f pydoc
++ '[' -z '' ']'
++ '[' -z '' ']'
++ '[' -n /bin/bash ']'
++ hash -r
++ '[' -z '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds-ubuntu14/PYTHON_EXE/python2/VENV_SYS/virtualenv/venv_TransportMaps-private-develop_python2
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/home/jenkins/bin:/home/jenkins/.local/bin
++ PATH=/home/jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds-ubuntu14/PYTHON_EXE/python2/VENV_SYS/virtualenv/venv_TransportMaps-private-develop_python2/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/home/jenkins/bin:/home/jenkins/.local/bin
++ export PATH
++ '[' -z '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ '[' x '!=' x ']'
+++ basename /home/jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds-ubuntu14/PYTHON_EXE/python2/VENV_SYS/virtualenv/venv_TransportMaps-private-develop_python2
++ PS1='(venv_TransportMaps-private-develop_python2) '
++ export PS1
++ alias pydoc
++ true
++ '[' -n /bin/bash ']'
++ hash -r
++ python -V
Python 2.7.6
+ PY_VERS=
+ echo ''

+ echo 'TEST_NAME: TransportMaps-private-develop'
TEST_NAME: TransportMaps-private-develop
++ hostname
+ echo 'HOSTNAME: reynolds-ubuntu14'
HOSTNAME: reynolds-ubuntu14
+ echo 'PATH: /home/jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds-ubuntu14/PYTHON_EXE/python2/VENV_SYS/virtualenv/venv_TransportMaps-private-develop_python2/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/home/jenkins/bin:/home/jenkins/.local/bin'
PATH: /home/jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds-ubuntu14/PYTHON_EXE/python2/VENV_SYS/virtualenv/venv_TransportMaps-private-develop_python2/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/home/jenkins/bin:/home/jenkins/.local/bin
+ echo 'VENV_OPTS: '
VENV_OPTS: 
+ echo 'PY-VERS: '
PY-VERS: 
+ echo ''

+ echo 'Upgrading pip'
Upgrading pip
+ python /home/jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds-ubuntu14/PYTHON_EXE/python2/VENV_SYS/virtualenv/venv_TransportMaps-private-develop_python2/bin/pip install --upgrade pip
DEPRECATION: Python 2.7 will reach the end of its life on January 1st, 2020. Please upgrade your Python as Python 2.7 won't be maintained after that date. A future version of pip will drop support for Python 2.7. More details about Python 2 support in pip, can be found at https://pip.pypa.io/en/latest/development/release-process/#python-2-support
/home/jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds-ubuntu14/PYTHON_EXE/python2/VENV_SYS/virtualenv/venv_TransportMaps-private-develop_python2/local/lib/python2.7/site-packages/pip/_vendor/urllib3/util/ssl_.py:365: SNIMissingWarning: An HTTPS request has been made, but the SNI (Server Name Indication) extension to TLS is not available on this platform. This may cause the server to present an incorrect TLS certificate, which can cause validation failures. You can upgrade to a newer version of Python to solve this. For more information, see https://urllib3.readthedocs.io/en/latest/advanced-usage.html#ssl-warnings
  SNIMissingWarning
/home/jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds-ubuntu14/PYTHON_EXE/python2/VENV_SYS/virtualenv/venv_TransportMaps-private-develop_python2/local/lib/python2.7/site-packages/pip/_vendor/urllib3/util/ssl_.py:149: InsecurePlatformWarning: A true SSLContext object is not available. This prevents urllib3 from configuring SSL appropriately and may cause certain SSL connections to fail. You can upgrade to a newer version of Python to solve this. For more information, see https://urllib3.readthedocs.io/en/latest/advanced-usage.html#ssl-warnings
  InsecurePlatformWarning
Requirement already up-to-date: pip in ./venv_TransportMaps-private-develop_python2/lib/python2.7/site-packages (19.2.1)
+ echo 'Installing numpy'
Installing numpy
+ python /home/jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds-ubuntu14/PYTHON_EXE/python2/VENV_SYS/virtualenv/venv_TransportMaps-private-develop_python2/bin/pip install --upgrade numpy
DEPRECATION: Python 2.7 will reach the end of its life on January 1st, 2020. Please upgrade your Python as Python 2.7 won't be maintained after that date. A future version of pip will drop support for Python 2.7. More details about Python 2 support in pip, can be found at https://pip.pypa.io/en/latest/development/release-process/#python-2-support
Collecting numpy
/home/jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds-ubuntu14/PYTHON_EXE/python2/VENV_SYS/virtualenv/venv_TransportMaps-private-develop_python2/local/lib/python2.7/site-packages/pip/_vendor/urllib3/util/ssl_.py:365: SNIMissingWarning: An HTTPS request has been made, but the SNI (Server Name Indication) extension to TLS is not available on this platform. This may cause the server to present an incorrect TLS certificate, which can cause validation failures. You can upgrade to a newer version of Python to solve this. For more information, see https://urllib3.readthedocs.io/en/latest/advanced-usage.html#ssl-warnings
  SNIMissingWarning
/home/jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds-ubuntu14/PYTHON_EXE/python2/VENV_SYS/virtualenv/venv_TransportMaps-private-develop_python2/local/lib/python2.7/site-packages/pip/_vendor/urllib3/util/ssl_.py:149: InsecurePlatformWarning: A true SSLContext object is not available. This prevents urllib3 from configuring SSL appropriately and may cause certain SSL connections to fail. You can upgrade to a newer version of Python to solve this. For more information, see https://urllib3.readthedocs.io/en/latest/advanced-usage.html#ssl-warnings
  InsecurePlatformWarning
  Using cached https://files.pythonhosted.org/packages/1f/c7/198496417c9c2f6226616cff7dedf2115a4f4d0276613bab842ec8ac1e23/numpy-1.16.4-cp27-cp27mu-manylinux1_x86_64.whl
Installing collected packages: numpy
Successfully installed numpy-1.16.4
+ echo 'Installing cython'
Installing cython
+ python /home/jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds-ubuntu14/PYTHON_EXE/python2/VENV_SYS/virtualenv/venv_TransportMaps-private-develop_python2/bin/pip install --upgrade cython
DEPRECATION: Python 2.7 will reach the end of its life on January 1st, 2020. Please upgrade your Python as Python 2.7 won't be maintained after that date. A future version of pip will drop support for Python 2.7. More details about Python 2 support in pip, can be found at https://pip.pypa.io/en/latest/development/release-process/#python-2-support
Collecting cython
/home/jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds-ubuntu14/PYTHON_EXE/python2/VENV_SYS/virtualenv/venv_TransportMaps-private-develop_python2/local/lib/python2.7/site-packages/pip/_vendor/urllib3/util/ssl_.py:365: SNIMissingWarning: An HTTPS request has been made, but the SNI (Server Name Indication) extension to TLS is not available on this platform. This may cause the server to present an incorrect TLS certificate, which can cause validation failures. You can upgrade to a newer version of Python to solve this. For more information, see https://urllib3.readthedocs.io/en/latest/advanced-usage.html#ssl-warnings
  SNIMissingWarning
/home/jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds-ubuntu14/PYTHON_EXE/python2/VENV_SYS/virtualenv/venv_TransportMaps-private-develop_python2/local/lib/python2.7/site-packages/pip/_vendor/urllib3/util/ssl_.py:149: InsecurePlatformWarning: A true SSLContext object is not available. This prevents urllib3 from configuring SSL appropriately and may cause certain SSL connections to fail. You can upgrade to a newer version of Python to solve this. For more information, see https://urllib3.readthedocs.io/en/latest/advanced-usage.html#ssl-warnings
  InsecurePlatformWarning
  Using cached https://files.pythonhosted.org/packages/22/71/0488db26e4525ac6c88af2a4486122a0511c68ff488199d3d519356a6be2/Cython-0.29.12-cp27-cp27mu-manylinux1_x86_64.whl
Installing collected packages: cython
Successfully installed cython-0.29.12
+ echo Packaging
Packaging
+ rm -fr tmp_sdist
+ mkdir tmp_sdist
+ python setup.py clean --all
/home/jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds-ubuntu14/PYTHON_EXE/python2/VENV_SYS/virtualenv/venv_TransportMaps-private-develop_python2/local/lib/python2.7/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /home/jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds-ubuntu14/PYTHON_EXE/python2/VENV_SYS/virtualenv/TransportMaps/Distributions/Examples/Lorenz96/fast_eval.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
Compiling TransportMaps/Distributions/Examples/Lorenz96/fast_eval.pyx because it changed.
[1/1] Cythonizing TransportMaps/Distributions/Examples/Lorenz96/fast_eval.pyx
running clean
'build/lib.linux-x86_64-2.7' does not exist -- can't clean it
'build/bdist.linux-x86_64' does not exist -- can't clean it
'build/scripts-2.7' does not exist -- can't clean it
+ python setup.py sdist --dist-dir=tmp_sdist
running sdist
running egg_info
creating TransportMaps.egg-info
writing requirements to TransportMaps.egg-info/requires.txt
writing TransportMaps.egg-info/PKG-INFO
writing top-level names to TransportMaps.egg-info/top_level.txt
writing dependency_links to TransportMaps.egg-info/dependency_links.txt
writing manifest file 'TransportMaps.egg-info/SOURCES.txt'
reading manifest file 'TransportMaps.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
no previously-included directories found matching 'Examples/stable/?/data'
warning: no previously-included files found matching '.git'
warning: no previously-included files found matching '*.dill'
warning: no previously-included files found matching '*.hdf5'
warning: no previously-included files found matching '*.pkl'
warning: no previously-included files found matching '*.pkl.old'
warning: no previously-included files found matching '*~'
writing manifest file 'TransportMaps.egg-info/SOURCES.txt'
running check
creating TransportMaps-3.0a0
creating TransportMaps-3.0a0/Examples
creating TransportMaps-3.0a0/Examples/stable
creating TransportMaps-3.0a0/Examples/stable/BODmodel
creating TransportMaps-3.0a0/Examples/stable/CPP-Module
creating TransportMaps-3.0a0/Examples/stable/CPP-Module/xun
creating TransportMaps-3.0a0/Examples/stable/CPP-Module/xun/tests
creating TransportMaps-3.0a0/Examples/stable/StochasticVolatility
creating TransportMaps-3.0a0/Examples/stable/TestDistributions
creating TransportMaps-3.0a0/Examples/stable/cluster
creating TransportMaps-3.0a0/Examples/stable/cluster/voyager
creating TransportMaps-3.0a0/TransportMaps
creating TransportMaps-3.0a0/TransportMaps.egg-info
creating TransportMaps-3.0a0/TransportMaps/Algorithms
creating TransportMaps-3.0a0/TransportMaps/Algorithms/Adaptivity
creating TransportMaps-3.0a0/TransportMaps/Algorithms/DeepLazyMaps
creating TransportMaps-3.0a0/TransportMaps/Algorithms/SequentialInference
creating TransportMaps-3.0a0/TransportMaps/Algorithms/SparsityIdentification
creating TransportMaps-3.0a0/TransportMaps/Builders
creating TransportMaps-3.0a0/TransportMaps/CLI
creating TransportMaps-3.0a0/TransportMaps/DOLFIN
creating TransportMaps-3.0a0/TransportMaps/Densities
creating TransportMaps-3.0a0/TransportMaps/Densities/Decomposable
creating TransportMaps-3.0a0/TransportMaps/Densities/Inference
creating TransportMaps-3.0a0/TransportMaps/Diagnostics
creating TransportMaps-3.0a0/TransportMaps/Distributions
creating TransportMaps-3.0a0/TransportMaps/Distributions/Decomposable
creating TransportMaps-3.0a0/TransportMaps/Distributions/Examples
creating TransportMaps-3.0a0/TransportMaps/Distributions/Examples/BiochemicalOxygenDemand
creating TransportMaps-3.0a0/TransportMaps/Distributions/Examples/BurgersPDE
creating TransportMaps-3.0a0/TransportMaps/Distributions/Examples/InertialNavigationSystem
creating TransportMaps-3.0a0/TransportMaps/Distributions/Examples/LogGaussianCoxProcess
creating TransportMaps-3.0a0/TransportMaps/Distributions/Examples/Lorenz63
creating TransportMaps-3.0a0/TransportMaps/Distributions/Examples/Lorenz96
creating TransportMaps-3.0a0/TransportMaps/Distributions/Examples/PoissonProblem
creating TransportMaps-3.0a0/TransportMaps/Distributions/Examples/RailwayVehicleDynamics
creating TransportMaps-3.0a0/TransportMaps/Distributions/Examples/RailwayVehicleDynamics/Coradia175
creating TransportMaps-3.0a0/TransportMaps/Distributions/Examples/ScalarLinearGaussMarkovProcess
creating TransportMaps-3.0a0/TransportMaps/Distributions/Examples/StochasticVolatility
creating TransportMaps-3.0a0/TransportMaps/Distributions/Examples/Timoshenko
creating TransportMaps-3.0a0/TransportMaps/Distributions/Inference
creating TransportMaps-3.0a0/TransportMaps/Functionals
creating TransportMaps-3.0a0/TransportMaps/Likelihoods
creating TransportMaps-3.0a0/TransportMaps/LinAlg
creating TransportMaps-3.0a0/TransportMaps/Maps
creating TransportMaps-3.0a0/TransportMaps/Maps/Decomposable
creating TransportMaps-3.0a0/TransportMaps/Maps/Functionals
creating TransportMaps-3.0a0/TransportMaps/Maps/ODEs
creating TransportMaps-3.0a0/TransportMaps/Optimization
creating TransportMaps-3.0a0/TransportMaps/RandomizedLinearAlgebra
creating TransportMaps-3.0a0/TransportMaps/Samplers
creating TransportMaps-3.0a0/TransportMaps/XML
creating TransportMaps-3.0a0/TransportMaps/XML/schema
creating TransportMaps-3.0a0/TransportMaps/tests
creating TransportMaps-3.0a0/TransportMaps/tests/xml
creating TransportMaps-3.0a0/TransportMaps/tests/xml/maps
creating TransportMaps-3.0a0/scripts
copying files to TransportMaps-3.0a0...
copying COPYING -> TransportMaps-3.0a0
copying COPYING.LESSER -> TransportMaps-3.0a0
copying MANIFEST.in -> TransportMaps-3.0a0
copying README.rst -> TransportMaps-3.0a0
copying requirements-H5PY.txt -> TransportMaps-3.0a0
copying requirements-MPI.txt -> TransportMaps-3.0a0
copying requirements-PLOT.txt -> TransportMaps-3.0a0
copying requirements-PYHMC.txt -> TransportMaps-3.0a0
copying requirements-SPHINX.txt -> TransportMaps-3.0a0
copying requirements.txt -> TransportMaps-3.0a0
copying setup.cfg -> TransportMaps-3.0a0
copying setup.py -> TransportMaps-3.0a0
copying Examples/stable/BODmodel/DataGeneration.py -> TransportMaps-3.0a0/Examples/stable/BODmodel
copying Examples/stable/CPP-Module/KLdivergence-InverseMap-InverseConstruction.py -> TransportMaps-3.0a0/Examples/stable/CPP-Module
copying Examples/stable/CPP-Module/xun/setup.py -> TransportMaps-3.0a0/Examples/stable/CPP-Module/xun
copying Examples/stable/CPP-Module/xun/tests/test.py -> TransportMaps-3.0a0/Examples/stable/CPP-Module/xun/tests
copying Examples/stable/StochasticVolatility/DataGeneration.py -> TransportMaps-3.0a0/Examples/stable/StochasticVolatility
copying Examples/stable/StochasticVolatility/PlotExchanges.py -> TransportMaps-3.0a0/Examples/stable/StochasticVolatility
copying Examples/stable/StochasticVolatility/mcmc.py -> TransportMaps-3.0a0/Examples/stable/StochasticVolatility
copying Examples/stable/StochasticVolatility/postprocess-plotting.py -> TransportMaps-3.0a0/Examples/stable/StochasticVolatility
copying Examples/stable/TestDistributions/KLdivergence-InverseMap-DirectConstruction-ByStep.py -> TransportMaps-3.0a0/Examples/stable/TestDistributions
copying Examples/stable/TestDistributions/KLdivergence-InverseMap-DirectConstruction.py -> TransportMaps-3.0a0/Examples/stable/TestDistributions
copying Examples/stable/TestDistributions/KLdivergence-InverseMap-InverseConstruction.py -> TransportMaps-3.0a0/Examples/stable/TestDistributions
copying Examples/stable/TestDistributions/KLdivergence.py -> TransportMaps-3.0a0/Examples/stable/TestDistributions
copying Examples/stable/TestDistributions/Regression.py -> TransportMaps-3.0a0/Examples/stable/TestDistributions
copying Examples/stable/cluster/voyager/run_unit_tests.py -> TransportMaps-3.0a0/Examples/stable/cluster/voyager
copying TransportMaps/Defaults.py -> TransportMaps-3.0a0/TransportMaps
copying TransportMaps/DerivativesChecks.py -> TransportMaps-3.0a0/TransportMaps
copying TransportMaps/External.py -> TransportMaps-3.0a0/TransportMaps
copying TransportMaps/FiniteDifference.py -> TransportMaps-3.0a0/TransportMaps
copying TransportMaps/LaplaceApproximationRoutines.py -> TransportMaps-3.0a0/TransportMaps
copying TransportMaps/Misc.py -> TransportMaps-3.0a0/TransportMaps
copying TransportMaps/ObjectBase.py -> TransportMaps-3.0a0/TransportMaps
copying TransportMaps/Routines.py -> TransportMaps-3.0a0/TransportMaps
copying TransportMaps/__init__.py -> TransportMaps-3.0a0/TransportMaps
copying TransportMaps/_version.py -> TransportMaps-3.0a0/TransportMaps
copying TransportMaps.egg-info/PKG-INFO -> TransportMaps-3.0a0/TransportMaps.egg-info
copying TransportMaps.egg-info/SOURCES.txt -> TransportMaps-3.0a0/TransportMaps.egg-info
copying TransportMaps.egg-info/dependency_links.txt -> TransportMaps-3.0a0/TransportMaps.egg-info
copying TransportMaps.egg-info/not-zip-safe -> TransportMaps-3.0a0/TransportMaps.egg-info
copying TransportMaps.egg-info/requires.txt -> TransportMaps-3.0a0/TransportMaps.egg-info
copying TransportMaps.egg-info/top_level.txt -> TransportMaps-3.0a0/TransportMaps.egg-info
copying TransportMaps/Algorithms/__init__.py -> TransportMaps-3.0a0/TransportMaps/Algorithms
copying TransportMaps/Algorithms/Adaptivity/KullbackLeiblerAdaptivity.py -> TransportMaps-3.0a0/TransportMaps/Algorithms/Adaptivity
copying TransportMaps/Algorithms/Adaptivity/RegressionAdaptivity.py -> TransportMaps-3.0a0/TransportMaps/Algorithms/Adaptivity
copying TransportMaps/Algorithms/Adaptivity/__init__.py -> TransportMaps-3.0a0/TransportMaps/Algorithms/Adaptivity
copying TransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapFactories.py -> TransportMaps-3.0a0/TransportMaps/Algorithms/DeepLazyMaps
copying TransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapsConstructionBase.py -> TransportMaps-3.0a0/TransportMaps/Algorithms/DeepLazyMaps
copying TransportMaps/Algorithms/DeepLazyMaps/__init__.py -> TransportMaps-3.0a0/TransportMaps/Algorithms/DeepLazyMaps
copying TransportMaps/Algorithms/SequentialInference/LinearSequentialInference.py -> TransportMaps-3.0a0/TransportMaps/Algorithms/SequentialInference
copying TransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.py -> TransportMaps-3.0a0/TransportMaps/Algorithms/SequentialInference
copying TransportMaps/Algorithms/SequentialInference/SequentialInferenceBase.py -> TransportMaps-3.0a0/TransportMaps/Algorithms/SequentialInference
copying TransportMaps/Algorithms/SequentialInference/__init__.py -> TransportMaps-3.0a0/TransportMaps/Algorithms/SequentialInference
copying TransportMaps/Algorithms/SparsityIdentification/GeneralizedPrecision.py -> TransportMaps-3.0a0/TransportMaps/Algorithms/SparsityIdentification
copying TransportMaps/Algorithms/SparsityIdentification/NodeOrdering.py -> TransportMaps-3.0a0/TransportMaps/Algorithms/SparsityIdentification
copying TransportMaps/Algorithms/SparsityIdentification/RegularizedMap.py -> TransportMaps-3.0a0/TransportMaps/Algorithms/SparsityIdentification
copying TransportMaps/Algorithms/SparsityIdentification/SparsityIdentificationNonGaussian.py -> TransportMaps-3.0a0/TransportMaps/Algorithms/SparsityIdentification
copying TransportMaps/Algorithms/SparsityIdentification/__init__.py -> TransportMaps-3.0a0/TransportMaps/Algorithms/SparsityIdentification
copying TransportMaps/Builders/BuilderBase.py -> TransportMaps-3.0a0/TransportMaps/Builders
copying TransportMaps/Builders/__init__.py -> TransportMaps-3.0a0/TransportMaps/Builders
copying TransportMaps/CLI/AdaptivityPostprocessBase.py -> TransportMaps-3.0a0/TransportMaps/CLI
copying TransportMaps/CLI/AvailableOptions.py -> TransportMaps-3.0a0/TransportMaps/CLI
copying TransportMaps/CLI/ConstructionScriptBase.py -> TransportMaps-3.0a0/TransportMaps/CLI
copying TransportMaps/CLI/DeepLazyMapsConstructionScriptBase.py -> TransportMaps-3.0a0/TransportMaps/CLI
copying TransportMaps/CLI/PostprocessBase.py -> TransportMaps-3.0a0/TransportMaps/CLI
copying TransportMaps/CLI/ScriptBase.py -> TransportMaps-3.0a0/TransportMaps/CLI
copying TransportMaps/CLI/SequentialPostprocessBase.py -> TransportMaps-3.0a0/TransportMaps/CLI
copying TransportMaps/CLI/__init__.py -> TransportMaps-3.0a0/TransportMaps/CLI
copying TransportMaps/DOLFIN/SolverBase.py -> TransportMaps-3.0a0/TransportMaps/DOLFIN
copying TransportMaps/DOLFIN/__init__.py -> TransportMaps-3.0a0/TransportMaps/DOLFIN
copying TransportMaps/Densities/Densities.py -> TransportMaps-3.0a0/TransportMaps/Densities
copying TransportMaps/Densities/__init__.py -> TransportMaps-3.0a0/TransportMaps/Densities
copying TransportMaps/Densities/Decomposable/SequentialInferenceDensities.py -> TransportMaps-3.0a0/TransportMaps/Densities/Decomposable
copying TransportMaps/Densities/Decomposable/__init__.py -> TransportMaps-3.0a0/TransportMaps/Densities/Decomposable
copying TransportMaps/Densities/Inference/InferenceBase.py -> TransportMaps-3.0a0/TransportMaps/Densities/Inference
copying TransportMaps/Densities/Inference/__init__.py -> TransportMaps-3.0a0/TransportMaps/Densities/Inference
copying TransportMaps/Diagnostics/Plotting.py -> TransportMaps-3.0a0/TransportMaps/Diagnostics
copying TransportMaps/Diagnostics/Routines.py -> TransportMaps-3.0a0/TransportMaps/Diagnostics
copying TransportMaps/Diagnostics/Validators.py -> TransportMaps-3.0a0/TransportMaps/Diagnostics
copying TransportMaps/Diagnostics/__init__.py -> TransportMaps-3.0a0/TransportMaps/Diagnostics
copying TransportMaps/Distributions/ConditionalDistributionBase.py -> TransportMaps-3.0a0/TransportMaps/Distributions
copying TransportMaps/Distributions/ConditionalDistributions.py -> TransportMaps-3.0a0/TransportMaps/Distributions
copying TransportMaps/Distributions/Deprecated.py -> TransportMaps-3.0a0/TransportMaps/Distributions
copying TransportMaps/Distributions/DistributionBase.py -> TransportMaps-3.0a0/TransportMaps/Distributions
copying TransportMaps/Distributions/DistributionFromSamplesBase.py -> TransportMaps-3.0a0/TransportMaps/Distributions
copying TransportMaps/Distributions/FactorizedDistributionBase.py -> TransportMaps-3.0a0/TransportMaps/Distributions
copying TransportMaps/Distributions/FrozenDistributions.py -> TransportMaps-3.0a0/TransportMaps/Distributions
copying TransportMaps/Distributions/ParametricDistributionBase.py -> TransportMaps-3.0a0/TransportMaps/Distributions
copying TransportMaps/Distributions/ParametricTransportMapDistributionBase.py -> TransportMaps-3.0a0/TransportMaps/Distributions
copying TransportMaps/Distributions/ParametricTransportMapDistributions.py -> TransportMaps-3.0a0/TransportMaps/Distributions
copying TransportMaps/Distributions/ProductDistributionBase.py -> TransportMaps-3.0a0/TransportMaps/Distributions
copying TransportMaps/Distributions/TransportMapDistributionBase.py -> TransportMaps-3.0a0/TransportMaps/Distributions
copying TransportMaps/Distributions/TransportMapDistributions.py -> TransportMaps-3.0a0/TransportMaps/Distributions
copying TransportMaps/Distributions/__init__.py -> TransportMaps-3.0a0/TransportMaps/Distributions
copying TransportMaps/Distributions/Decomposable/LinearGaussianSequentialInferenceDistributions.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Decomposable
copying TransportMaps/Distributions/Decomposable/SequentialInferenceDistributions.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Decomposable
copying TransportMaps/Distributions/Decomposable/__init__.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Decomposable
copying TransportMaps/Distributions/Examples/SimpleDistributions.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples
copying TransportMaps/Distributions/Examples/__init__.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples
copying TransportMaps/Distributions/Examples/BiochemicalOxygenDemand/BODDistributions.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/BiochemicalOxygenDemand
copying TransportMaps/Distributions/Examples/BiochemicalOxygenDemand/__init__.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/BiochemicalOxygenDemand
copying TransportMaps/Distributions/Examples/BurgersPDE/BurgersDistributions.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/BurgersPDE
copying TransportMaps/Distributions/Examples/BurgersPDE/BurgersProblems.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/BurgersPDE
copying TransportMaps/Distributions/Examples/BurgersPDE/__init__.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/BurgersPDE
copying TransportMaps/Distributions/Examples/InertialNavigationSystem/INSDistributions.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/InertialNavigationSystem
copying TransportMaps/Distributions/Examples/InertialNavigationSystem/__init__.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/InertialNavigationSystem
copying TransportMaps/Distributions/Examples/LogGaussianCoxProcess/LogGaussianCoxProcessDistributions.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/LogGaussianCoxProcess
copying TransportMaps/Distributions/Examples/LogGaussianCoxProcess/__init__.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/LogGaussianCoxProcess
copying TransportMaps/Distributions/Examples/Lorenz63/Lorenz63Distributions.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/Lorenz63
copying TransportMaps/Distributions/Examples/Lorenz63/__init__.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/Lorenz63
copying TransportMaps/Distributions/Examples/Lorenz96/Lorenz96Distributions.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/Lorenz96
copying TransportMaps/Distributions/Examples/Lorenz96/__init__.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/Lorenz96
copying TransportMaps/Distributions/Examples/Lorenz96/fast_eval.c -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/Lorenz96
copying TransportMaps/Distributions/Examples/Lorenz96/fast_eval.pyx -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/Lorenz96
copying TransportMaps/Distributions/Examples/PoissonProblem/PoissonDistributions.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/PoissonProblem
copying TransportMaps/Distributions/Examples/PoissonProblem/PoissonProblems.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/PoissonProblem
copying TransportMaps/Distributions/Examples/PoissonProblem/__init__.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/PoissonProblem
copying TransportMaps/Distributions/Examples/RailwayVehicleDynamics/__init__.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/RailwayVehicleDynamics
copying TransportMaps/Distributions/Examples/RailwayVehicleDynamics/Coradia175/Coradia175VehicleParametersEstimation.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/RailwayVehicleDynamics/Coradia175
copying TransportMaps/Distributions/Examples/RailwayVehicleDynamics/Coradia175/Coradia175VehicleStateSpace.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/RailwayVehicleDynamics/Coradia175
copying TransportMaps/Distributions/Examples/RailwayVehicleDynamics/Coradia175/__init__.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/RailwayVehicleDynamics/Coradia175
copying TransportMaps/Distributions/Examples/ScalarLinearGaussMarkovProcess/Distributions.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/ScalarLinearGaussMarkovProcess
copying TransportMaps/Distributions/Examples/ScalarLinearGaussMarkovProcess/__init__.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/ScalarLinearGaussMarkovProcess
copying TransportMaps/Distributions/Examples/StochasticVolatility/StocVolHyperDistributions.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/StochasticVolatility
copying TransportMaps/Distributions/Examples/StochasticVolatility/__init__.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/StochasticVolatility
copying TransportMaps/Distributions/Examples/Timoshenko/TimoshenkoDistributions.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/Timoshenko
copying TransportMaps/Distributions/Examples/Timoshenko/TimoshenkoProblems.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/Timoshenko
copying TransportMaps/Distributions/Examples/Timoshenko/__init__.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/Timoshenko
copying TransportMaps/Distributions/Inference/InferenceBase.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Inference
copying TransportMaps/Distributions/Inference/__init__.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Inference
copying TransportMaps/Functionals/__init__.py -> TransportMaps-3.0a0/TransportMaps/Functionals
copying TransportMaps/Likelihoods/LikelihoodBase.py -> TransportMaps-3.0a0/TransportMaps/Likelihoods
copying TransportMaps/Likelihoods/__init__.py -> TransportMaps-3.0a0/TransportMaps/Likelihoods
copying TransportMaps/LinAlg/__init__.py -> TransportMaps-3.0a0/TransportMaps/LinAlg
copying TransportMaps/LinAlg/_linalg.py -> TransportMaps-3.0a0/TransportMaps/LinAlg
copying TransportMaps/Maps/AffineMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/AffineTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/AffineTriangularMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/ComponentwiseMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/ComponentwiseTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/ConditionalTriangularTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/ConstantMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/Defaults.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/DeprecatedConditionallyLinearMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/DiagonalComponentwiseTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/DiagonalIsotropicTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/FrozenTriangularTransportMaps.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/IdentityEmbeddedParametricTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/IdentityEmbeddedTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/IdentityParametricTriangularComponentwiseTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/IdentityTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/IntegratedExponentialParametricTriangularComponentwiseTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/IntegratedSquaredParametricTriangularComponentwiseTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/InverseMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/InverseParametricMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/InverseParametricTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/InverseTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/LinearSpanParametricTriangularComponentwiseMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/ListCompositeMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/ListCompositeTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/ListStackedMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/ListStackedParametricMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/ListStackedParametricTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/ListStackedTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/MapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/MapFactoryBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/MiscMaps.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/NonMonotoneLinearSpanParametricTriangularComponentwiseTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/ParametricComponentwiseMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/ParametricComponentwiseTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/ParametricMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/ParametricTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/ParametricTriangularComponentwiseMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/ParametricTriangularComponentwiseTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/PermutationTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/SlicedMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/SlicedTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/TransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/TriangularComponentwiseMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/TriangularComponentwiseTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/TriangularListStackedParametricTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/TriangularListStackedTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/__init__.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/Decomposable/SequentialInferenceMapFactoryBase.py -> TransportMaps-3.0a0/TransportMaps/Maps/Decomposable
copying TransportMaps/Maps/Decomposable/SequentialInferenceMaps.py -> TransportMaps-3.0a0/TransportMaps/Maps/Decomposable
copying TransportMaps/Maps/Decomposable/__init__.py -> TransportMaps-3.0a0/TransportMaps/Maps/Decomposable
copying TransportMaps/Maps/Functionals/AnchoredIntegratedSquaredParametricFunctionalBase.py -> TransportMaps-3.0a0/TransportMaps/Maps/Functionals
copying TransportMaps/Maps/Functionals/FrozenMonotonicFunctions.py -> TransportMaps-3.0a0/TransportMaps/Maps/Functionals
copying TransportMaps/Maps/Functionals/FunctionalBase.py -> TransportMaps-3.0a0/TransportMaps/Maps/Functionals
copying TransportMaps/Maps/Functionals/IdentityParametricMonotoneFunctionalBase.py -> TransportMaps-3.0a0/TransportMaps/Maps/Functionals
copying TransportMaps/Maps/Functionals/IntegratedExponentialParametricMonotoneFunctionalBase.py -> TransportMaps-3.0a0/TransportMaps/Maps/Functionals
copying TransportMaps/Maps/Functionals/IntegratedSquaredParametricMonotoneFunctionalBase.py -> TransportMaps-3.0a0/TransportMaps/Maps/Functionals
copying TransportMaps/Maps/Functionals/LinearSpanTensorizedParametricFunctionalBase.py -> TransportMaps-3.0a0/TransportMaps/Maps/Functionals
copying TransportMaps/Maps/Functionals/MonotoneFunctionalBase.py -> TransportMaps-3.0a0/TransportMaps/Maps/Functionals
copying TransportMaps/Maps/Functionals/ParametricFunctionalBase.py -> TransportMaps-3.0a0/TransportMaps/Maps/Functionals
copying TransportMaps/Maps/Functionals/ParametricMonotoneFunctionalBase.py -> TransportMaps-3.0a0/TransportMaps/Maps/Functionals
copying TransportMaps/Maps/Functionals/PointwiseMonotoneLinearSpanTensorizedParametricFunctionalBase.py -> TransportMaps-3.0a0/TransportMaps/Maps/Functionals
copying TransportMaps/Maps/Functionals/ProductDistributionParametricPullbackComponentFunctionBase.py -> TransportMaps-3.0a0/TransportMaps/Maps/Functionals
copying TransportMaps/Maps/Functionals/TensorizedParametricFunctionalBase.py -> TransportMaps-3.0a0/TransportMaps/Maps/Functionals
copying TransportMaps/Maps/Functionals/__init__.py -> TransportMaps-3.0a0/TransportMaps/Maps/Functionals
copying TransportMaps/Maps/ODEs/DiscretizedODEsMaps.py -> TransportMaps-3.0a0/TransportMaps/Maps/ODEs
copying TransportMaps/Maps/ODEs/__init__.py -> TransportMaps-3.0a0/TransportMaps/Maps/ODEs
copying TransportMaps/Optimization/Optimizers.py -> TransportMaps-3.0a0/TransportMaps/Optimization
copying TransportMaps/Optimization/__init__.py -> TransportMaps-3.0a0/TransportMaps/Optimization
copying TransportMaps/RandomizedLinearAlgebra/RandomizedLinearAlgebra.py -> TransportMaps-3.0a0/TransportMaps/RandomizedLinearAlgebra
copying TransportMaps/RandomizedLinearAlgebra/__init__.py -> TransportMaps-3.0a0/TransportMaps/RandomizedLinearAlgebra
copying TransportMaps/Samplers/IndependentSamplers.py -> TransportMaps-3.0a0/TransportMaps/Samplers
copying TransportMaps/Samplers/MarkovChainSamplers.py -> TransportMaps-3.0a0/TransportMaps/Samplers
copying TransportMaps/Samplers/Routines.py -> TransportMaps-3.0a0/TransportMaps/Samplers
copying TransportMaps/Samplers/SamplerBase.py -> TransportMaps-3.0a0/TransportMaps/Samplers
copying TransportMaps/Samplers/__init__.py -> TransportMaps-3.0a0/TransportMaps/Samplers
copying TransportMaps/Samplers/puwr.py -> TransportMaps-3.0a0/TransportMaps/Samplers
copying TransportMaps/XML/Parser.py -> TransportMaps-3.0a0/TransportMaps/XML
copying TransportMaps/XML/__init__.py -> TransportMaps-3.0a0/TransportMaps/XML
copying TransportMaps/XML/schema/map.xsd -> TransportMaps-3.0a0/TransportMaps/XML/schema
copying TransportMaps/tests/TestFunctions.py -> TransportMaps-3.0a0/TransportMaps/tests
copying TransportMaps/tests/__init__.py -> TransportMaps-3.0a0/TransportMaps/tests
copying TransportMaps/tests/test_L2_minimization.py -> TransportMaps-3.0a0/TransportMaps/tests
copying TransportMaps/tests/test_L2_misfit.py -> TransportMaps-3.0a0/TransportMaps/tests
copying TransportMaps/tests/test_all.py -> TransportMaps-3.0a0/TransportMaps/tests
copying TransportMaps/tests/test_distributions.py -> TransportMaps-3.0a0/TransportMaps/tests
copying TransportMaps/tests/test_functions.py -> TransportMaps-3.0a0/TransportMaps/tests
copying TransportMaps/tests/test_kl_divergence.py -> TransportMaps-3.0a0/TransportMaps/tests
copying TransportMaps/tests/test_kl_minimization.py -> TransportMaps-3.0a0/TransportMaps/tests
copying TransportMaps/tests/test_laplace.py -> TransportMaps-3.0a0/TransportMaps/tests
copying TransportMaps/tests/test_rla.py -> TransportMaps-3.0a0/TransportMaps/tests
copying TransportMaps/tests/test_scripts.py -> TransportMaps-3.0a0/TransportMaps/tests
copying TransportMaps/tests/test_sequential_inference.py -> TransportMaps-3.0a0/TransportMaps/tests
copying TransportMaps/tests/test_transportmap_distributions.py -> TransportMaps-3.0a0/TransportMaps/tests
copying TransportMaps/tests/test_transportmap_distributions_sampling.py -> TransportMaps-3.0a0/TransportMaps/tests
copying TransportMaps/tests/test_transportmaps.py -> TransportMaps-3.0a0/TransportMaps/tests
copying TransportMaps/tests/xml/maps/FullOrdIntExpLinearMap_5d.xml -> TransportMaps-3.0a0/TransportMaps/tests/xml/maps
copying TransportMaps/tests/xml/maps/FullOrdIntExpNonLinearHeadMap_5d.xml -> TransportMaps-3.0a0/TransportMaps/tests/xml/maps
copying TransportMaps/tests/xml/maps/FullOrdIntExpNonLinearMap_5d.xml -> TransportMaps-3.0a0/TransportMaps/tests/xml/maps
copying TransportMaps/tests/xml/maps/FullOrdIntExpTriDiagonalMap_5d.xml -> TransportMaps-3.0a0/TransportMaps/tests/xml/maps
copying TransportMaps/tests/xml/maps/FullOrdMonotLinearSpanLinearMap_5d.xml -> TransportMaps-3.0a0/TransportMaps/tests/xml/maps
copying TransportMaps/tests/xml/maps/MultiIdxMonotLinearSpanLinearMap_5d.xml -> TransportMaps-3.0a0/TransportMaps/tests/xml/maps
copying TransportMaps/tests/xml/maps/TotalOrdIntExpDiagonalMap_5d.xml -> TransportMaps-3.0a0/TransportMaps/tests/xml/maps
copying TransportMaps/tests/xml/maps/TotalOrdIntExpLinearMap_5d.xml -> TransportMaps-3.0a0/TransportMaps/tests/xml/maps
copying TransportMaps/tests/xml/maps/TotalOrdIntExpNonLinearHeadMap_5d.xml -> TransportMaps-3.0a0/TransportMaps/tests/xml/maps
copying TransportMaps/tests/xml/maps/TotalOrdIntExpNonLinearMap_5d.xml -> TransportMaps-3.0a0/TransportMaps/tests/xml/maps
copying TransportMaps/tests/xml/maps/TotalOrdIntExpNonLinearRBFMap_5d.xml -> TransportMaps-3.0a0/TransportMaps/tests/xml/maps
copying TransportMaps/tests/xml/maps/TotalOrdIntExpTriDiagonalMap_5d.xml -> TransportMaps-3.0a0/TransportMaps/tests/xml/maps
copying TransportMaps/tests/xml/maps/TotalOrdIntSqLinearMap_5d.xml -> TransportMaps-3.0a0/TransportMaps/tests/xml/maps
copying TransportMaps/tests/xml/maps/TotalOrdIntSqNonLinearHeadMap_5d.xml -> TransportMaps-3.0a0/TransportMaps/tests/xml/maps
copying TransportMaps/tests/xml/maps/TotalOrdMonotLinearSpanLinearMap_5d.xml -> TransportMaps-3.0a0/TransportMaps/tests/xml/maps
copying scripts/tmap-adaptivity-postprocess -> TransportMaps-3.0a0/scripts
copying scripts/tmap-deep-lazy-tm -> TransportMaps-3.0a0/scripts
copying scripts/tmap-deep-lazy-trim -> TransportMaps-3.0a0/scripts
copying scripts/tmap-laplace -> TransportMaps-3.0a0/scripts
copying scripts/tmap-load-dill -> TransportMaps-3.0a0/scripts
copying scripts/tmap-max-likelihood -> TransportMaps-3.0a0/scripts
copying scripts/tmap-postprocess -> TransportMaps-3.0a0/scripts
copying scripts/tmap-sequential-postprocess -> TransportMaps-3.0a0/scripts
copying scripts/tmap-sequential-tm -> TransportMaps-3.0a0/scripts
copying scripts/tmap-tm -> TransportMaps-3.0a0/scripts
Writing TransportMaps-3.0a0/setup.cfg
Creating tar archive
removing 'TransportMaps-3.0a0' (and everything under it)
+ cd tmp_sdist
+ echo Installing
Installing
++ ls
+ INSTALLER=TransportMaps-3.0a0.tar.gz
+ PIP_FLAGS=--no-cache-dir
+ CC=clang
+ MPI=False
+ H5PY=True
+ python /home/jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds-ubuntu14/PYTHON_EXE/python2/VENV_SYS/virtualenv/venv_TransportMaps-private-develop_python2/bin/pip install --upgrade TransportMaps-3.0a0.tar.gz --recythonize

Usage:   
  pip install [options] <requirement specifier> [package-index-options] ...
  pip install [options] -r <requirements file> [package-index-options] ...
  pip install [options] [-e] <vcs project url> ...
  pip install [options] [-e] <local project path> ...
  pip install [options] <archive url/path> ...

no such option: --recythonize
Build step 'Execute shell' marked build as failure
[WS-CLEANUP] Deleting project workspace...
[WS-CLEANUP] Skipped based on build state FAILURE
Finished: FAILURE