Console Output

Started by upstream project "TransportMaps-private-develop" build number 86
originally caused by:
 Started by BitBucket push by joshuawchen
 Started by BitBucket push by joshuawchen
Running as SYSTEM
[EnvInject] - Loading node environment variables.
Building remotely on reynolds in workspace /jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds/PYTHON_EXE/python2/VENV_SYS/virtualenv
[WS-CLEANUP] Deleting project workspace...
[WS-CLEANUP] Deferred wipeout is used...
No credentials specified
Cloning the remote Git repository
Cloning repository git@bitbucket.org:dabi86/transportmaps-private.git
 > git init /jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds/PYTHON_EXE/python2/VENV_SYS/virtualenv # timeout=10
Fetching upstream changes from git@bitbucket.org:dabi86/transportmaps-private.git
 > git --version # timeout=10
 > git fetch --tags --progress git@bitbucket.org:dabi86/transportmaps-private.git +refs/heads/*:refs/remotes/origin/* # timeout=10
 > git config remote.origin.url git@bitbucket.org:dabi86/transportmaps-private.git # timeout=10
 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10
 > git config remote.origin.url git@bitbucket.org:dabi86/transportmaps-private.git # timeout=10
Fetching upstream changes from git@bitbucket.org:dabi86/transportmaps-private.git
 > git fetch --tags --progress git@bitbucket.org:dabi86/transportmaps-private.git +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision 7779cc167681b4b73d30ad1188ac9535c25af93e (refs/remotes/origin/develop/master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 7779cc167681b4b73d30ad1188ac9535c25af93e # timeout=10
Commit message: "Should be allright"
 > git rev-list --no-walk 6124e8bb10ad97b3158e0a11df2d7a0868244c11 # timeout=10
[virtualenv] $ /bin/bash -xe /tmp/jenkins5304866712415840128.sh
+ bash -ex jenkins/test-source.sh
+ set -e
+ PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/home/jenkins/.local/bin
++ pwd
+ ROOT=/jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds/PYTHON_EXE/python2/VENV_SYS/virtualenv
++ echo TransportMaps-private-develop/COMPILER=clang,MACHINE=reynolds,PYTHON_EXE=python2,VENV_SYS=virtualenv
++ cut -d / -f 1
+ TEST_NAME=TransportMaps-private-develop
+ ENV_NAME=venv_TransportMaps-private-develop_python2
+ VENV_OPTS=
+ [[ TransportMaps-private-develop == *\m\p\i* ]]
+ TTYPE=serial
+ MPI=False
++ hostname
+ [[ reynolds == *\m\a\c\y\s* ]]
++ hostname
+ [[ reynolds == \m\a\c\y\s\-\S\i\e\r\r\a ]]
++ hostname
+ [[ reynolds == *\r\e\y\n\o\l\d\s* ]]
+ export PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/home/jenkins/.local/bin:/home/jenkins/bin
+ PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/home/jenkins/.local/bin:/home/jenkins/bin
+ export PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/home/jenkins/.local/bin:/home/jenkins/bin:/home/jenkins/.local/bin
+ PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/home/jenkins/.local/bin:/home/jenkins/bin:/home/jenkins/.local/bin
+ '[' virtualenv = virtualenv ']'
+ rm -rf venv_TransportMaps-private-develop_python2
+ virtualenv --python=python2 venv_TransportMaps-private-develop_python2
New python executable in /jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds/PYTHON_EXE/python2/VENV_SYS/virtualenv/venv_TransportMaps-private-develop_python2/bin/python2
Also creating executable in /jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds/PYTHON_EXE/python2/VENV_SYS/virtualenv/venv_TransportMaps-private-develop_python2/bin/python
Installing setuptools, pip, wheel...done.
Running virtualenv with interpreter /usr/bin/python2
+ source venv_TransportMaps-private-develop_python2/bin/activate
++ deactivate nondestructive
++ unset -f pydoc
++ '[' -z '' ']'
++ '[' -z '' ']'
++ '[' -n /bin/bash ']'
++ hash -r
++ '[' -z '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds/PYTHON_EXE/python2/VENV_SYS/virtualenv/venv_TransportMaps-private-develop_python2
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/home/jenkins/.local/bin:/home/jenkins/bin:/home/jenkins/.local/bin
++ PATH=/jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds/PYTHON_EXE/python2/VENV_SYS/virtualenv/venv_TransportMaps-private-develop_python2/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/home/jenkins/.local/bin:/home/jenkins/bin:/home/jenkins/.local/bin
++ export PATH
++ '[' -z '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ '[' x '!=' x ']'
+++ basename /jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds/PYTHON_EXE/python2/VENV_SYS/virtualenv/venv_TransportMaps-private-develop_python2
++ PS1='(venv_TransportMaps-private-develop_python2) '
++ export PS1
++ alias pydoc
++ '[' -n /bin/bash ']'
++ hash -r
++ python -V
Python 2.7.12
+ PY_VERS=
+ echo ''

+ echo 'TEST_NAME: TransportMaps-private-develop'
TEST_NAME: TransportMaps-private-develop
++ hostname
+ echo 'HOSTNAME: reynolds'
HOSTNAME: reynolds
+ echo 'PATH: /jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds/PYTHON_EXE/python2/VENV_SYS/virtualenv/venv_TransportMaps-private-develop_python2/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/home/jenkins/.local/bin:/home/jenkins/bin:/home/jenkins/.local/bin'
PATH: /jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds/PYTHON_EXE/python2/VENV_SYS/virtualenv/venv_TransportMaps-private-develop_python2/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/home/jenkins/.local/bin:/home/jenkins/bin:/home/jenkins/.local/bin
+ echo 'VENV_OPTS: '
VENV_OPTS: 
+ echo 'PY-VERS: '
PY-VERS: 
+ echo ''

+ echo 'Upgrading pip'
Upgrading pip
+ python /jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds/PYTHON_EXE/python2/VENV_SYS/virtualenv/venv_TransportMaps-private-develop_python2/bin/pip install --upgrade pip
DEPRECATION: Python 2.7 will reach the end of its life on January 1st, 2020. Please upgrade your Python as Python 2.7 won't be maintained after that date. A future version of pip will drop support for Python 2.7. More details about Python 2 support in pip, can be found at https://pip.pypa.io/en/latest/development/release-process/#python-2-support
Requirement already up-to-date: pip in ./venv_TransportMaps-private-develop_python2/lib/python2.7/site-packages (19.3.1)
+ echo 'Installing numpy'
Installing numpy
+ python /jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds/PYTHON_EXE/python2/VENV_SYS/virtualenv/venv_TransportMaps-private-develop_python2/bin/pip install --upgrade numpy
DEPRECATION: Python 2.7 will reach the end of its life on January 1st, 2020. Please upgrade your Python as Python 2.7 won't be maintained after that date. A future version of pip will drop support for Python 2.7. More details about Python 2 support in pip, can be found at https://pip.pypa.io/en/latest/development/release-process/#python-2-support
Collecting numpy
  Using cached https://files.pythonhosted.org/packages/d7/b1/3367ea1f372957f97a6752ec725b87886e12af1415216feec9067e31df70/numpy-1.16.5-cp27-cp27mu-manylinux1_x86_64.whl
Installing collected packages: numpy
Successfully installed numpy-1.16.5
+ echo 'Installing cython'
Installing cython
+ python /jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds/PYTHON_EXE/python2/VENV_SYS/virtualenv/venv_TransportMaps-private-develop_python2/bin/pip install --upgrade cython
DEPRECATION: Python 2.7 will reach the end of its life on January 1st, 2020. Please upgrade your Python as Python 2.7 won't be maintained after that date. A future version of pip will drop support for Python 2.7. More details about Python 2 support in pip, can be found at https://pip.pypa.io/en/latest/development/release-process/#python-2-support
Collecting cython
  Using cached https://files.pythonhosted.org/packages/7b/d2/060a4f311c3b4a83cb050882f1032dabd5c8045b489dc699cff60bcebdba/Cython-0.29.14-cp27-cp27mu-manylinux1_x86_64.whl
Installing collected packages: cython
Successfully installed cython-0.29.14
+ echo Packaging
Packaging
+ rm -fr tmp_sdist
+ mkdir tmp_sdist
+ python setup.py clean --all
running clean
'build/lib.linux-x86_64-2.7' does not exist -- can't clean it
'build/bdist.linux-x86_64' does not exist -- can't clean it
'build/scripts-2.7' does not exist -- can't clean it
+ python setup.py sdist --dist-dir=tmp_sdist
running sdist
running egg_info
creating TransportMaps.egg-info
writing requirements to TransportMaps.egg-info/requires.txt
writing TransportMaps.egg-info/PKG-INFO
writing top-level names to TransportMaps.egg-info/top_level.txt
writing dependency_links to TransportMaps.egg-info/dependency_links.txt
writing manifest file 'TransportMaps.egg-info/SOURCES.txt'
reading manifest file 'TransportMaps.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
no previously-included directories found matching 'Examples/stable/?/data'
warning: no previously-included files found matching '.git'
warning: no previously-included files found matching '*.dill'
warning: no previously-included files found matching '*.hdf5'
warning: no previously-included files found matching '*.pkl'
warning: no previously-included files found matching '*.pkl.old'
warning: no previously-included files found matching '*~'
writing manifest file 'TransportMaps.egg-info/SOURCES.txt'
running check
creating TransportMaps-3.0a0
creating TransportMaps-3.0a0/Examples
creating TransportMaps-3.0a0/Examples/research
creating TransportMaps-3.0a0/Examples/research/LazyMaps
creating TransportMaps-3.0a0/Examples/research/LazyMaps/BOD
creating TransportMaps-3.0a0/Examples/research/LazyMaps/LogGaussianCoxProcess
creating TransportMaps-3.0a0/Examples/research/LazyMaps/banana
creating TransportMaps-3.0a0/Examples/research/LazyMaps/cantilever-timoshenko
creating TransportMaps-3.0a0/Examples/research/LazyMaps/euler-bernoulli
creating TransportMaps-3.0a0/Examples/research/LazyMaps/parkinson
creating TransportMaps-3.0a0/Examples/research/LazyMaps/poisson
creating TransportMaps-3.0a0/Examples/research/LazyMaps/stan-spelling
creating TransportMaps-3.0a0/Examples/stable
creating TransportMaps-3.0a0/Examples/stable/BODmodel
creating TransportMaps-3.0a0/Examples/stable/CPP-Module
creating TransportMaps-3.0a0/Examples/stable/CPP-Module/xun
creating TransportMaps-3.0a0/Examples/stable/CPP-Module/xun/tests
creating TransportMaps-3.0a0/Examples/stable/StochasticVolatility
creating TransportMaps-3.0a0/Examples/stable/TestDistributions
creating TransportMaps-3.0a0/Examples/stable/cluster
creating TransportMaps-3.0a0/Examples/stable/cluster/voyager
creating TransportMaps-3.0a0/TransportMaps
creating TransportMaps-3.0a0/TransportMaps.egg-info
creating TransportMaps-3.0a0/TransportMaps/Algorithms
creating TransportMaps-3.0a0/TransportMaps/Algorithms/Adaptivity
creating TransportMaps-3.0a0/TransportMaps/Algorithms/DeepLazyMaps
creating TransportMaps-3.0a0/TransportMaps/Algorithms/SequentialInference
creating TransportMaps-3.0a0/TransportMaps/Algorithms/SparsityIdentification
creating TransportMaps-3.0a0/TransportMaps/Builders
creating TransportMaps-3.0a0/TransportMaps/CLI
creating TransportMaps-3.0a0/TransportMaps/DOLFIN
creating TransportMaps-3.0a0/TransportMaps/Densities
creating TransportMaps-3.0a0/TransportMaps/Densities/Decomposable
creating TransportMaps-3.0a0/TransportMaps/Densities/Inference
creating TransportMaps-3.0a0/TransportMaps/Diagnostics
creating TransportMaps-3.0a0/TransportMaps/Distributions
creating TransportMaps-3.0a0/TransportMaps/Distributions/Decomposable
creating TransportMaps-3.0a0/TransportMaps/Distributions/Examples
creating TransportMaps-3.0a0/TransportMaps/Distributions/Examples/BiochemicalOxygenDemand
creating TransportMaps-3.0a0/TransportMaps/Distributions/Examples/BurgersPDE
creating TransportMaps-3.0a0/TransportMaps/Distributions/Examples/InertialNavigationSystem
creating TransportMaps-3.0a0/TransportMaps/Distributions/Examples/LogGaussianCoxProcess
creating TransportMaps-3.0a0/TransportMaps/Distributions/Examples/Lorenz63
creating TransportMaps-3.0a0/TransportMaps/Distributions/Examples/Lorenz96
creating TransportMaps-3.0a0/TransportMaps/Distributions/Examples/PoissonProblem
creating TransportMaps-3.0a0/TransportMaps/Distributions/Examples/RailwayVehicleDynamics
creating TransportMaps-3.0a0/TransportMaps/Distributions/Examples/RailwayVehicleDynamics/Coradia175
creating TransportMaps-3.0a0/TransportMaps/Distributions/Examples/ScalarLinearGaussMarkovProcess
creating TransportMaps-3.0a0/TransportMaps/Distributions/Examples/StochasticVolatility
creating TransportMaps-3.0a0/TransportMaps/Distributions/Examples/Timoshenko
creating TransportMaps-3.0a0/TransportMaps/Distributions/Inference
creating TransportMaps-3.0a0/TransportMaps/Functionals
creating TransportMaps-3.0a0/TransportMaps/Likelihoods
creating TransportMaps-3.0a0/TransportMaps/LinAlg
creating TransportMaps-3.0a0/TransportMaps/Maps
creating TransportMaps-3.0a0/TransportMaps/Maps/Decomposable
creating TransportMaps-3.0a0/TransportMaps/Maps/Functionals
creating TransportMaps-3.0a0/TransportMaps/Maps/ODEs
creating TransportMaps-3.0a0/TransportMaps/Optimization
creating TransportMaps-3.0a0/TransportMaps/RandomizedLinearAlgebra
creating TransportMaps-3.0a0/TransportMaps/Samplers
creating TransportMaps-3.0a0/TransportMaps/XML
creating TransportMaps-3.0a0/TransportMaps/XML/schema
creating TransportMaps-3.0a0/TransportMaps/tests
creating TransportMaps-3.0a0/TransportMaps/tests/xml
creating TransportMaps-3.0a0/TransportMaps/tests/xml/maps
creating TransportMaps-3.0a0/scripts
copying files to TransportMaps-3.0a0...
copying COPYING -> TransportMaps-3.0a0
copying COPYING.LESSER -> TransportMaps-3.0a0
copying MANIFEST.in -> TransportMaps-3.0a0
copying README.rst -> TransportMaps-3.0a0
copying requirements-H5PY.txt -> TransportMaps-3.0a0
copying requirements-MPI.txt -> TransportMaps-3.0a0
copying requirements-PLOT.txt -> TransportMaps-3.0a0
copying requirements-PYHMC.txt -> TransportMaps-3.0a0
copying requirements-SPHINX.txt -> TransportMaps-3.0a0
copying requirements.txt -> TransportMaps-3.0a0
copying setup.cfg -> TransportMaps-3.0a0
copying setup.py -> TransportMaps-3.0a0
copying Examples/research/LazyMaps/BOD/GenerateBODJoint.py -> TransportMaps-3.0a0/Examples/research/LazyMaps/BOD
copying Examples/research/LazyMaps/BOD/bod.py -> TransportMaps-3.0a0/Examples/research/LazyMaps/BOD
copying Examples/research/LazyMaps/BOD/bod_joint.py -> TransportMaps-3.0a0/Examples/research/LazyMaps/BOD
copying Examples/research/LazyMaps/BOD/whiten.py -> TransportMaps-3.0a0/Examples/research/LazyMaps/BOD
copying Examples/research/LazyMaps/LogGaussianCoxProcess/DataGeneration.py -> TransportMaps-3.0a0/Examples/research/LazyMaps/LogGaussianCoxProcess
copying Examples/research/LazyMaps/LogGaussianCoxProcess/PlotData.py -> TransportMaps-3.0a0/Examples/research/LazyMaps/LogGaussianCoxProcess
copying Examples/research/LazyMaps/LogGaussianCoxProcess/Postprocess-mean-std.py -> TransportMaps-3.0a0/Examples/research/LazyMaps/LogGaussianCoxProcess
copying Examples/research/LazyMaps/LogGaussianCoxProcess/Postprocess-realizations.py -> TransportMaps-3.0a0/Examples/research/LazyMaps/LogGaussianCoxProcess
copying Examples/research/LazyMaps/LogGaussianCoxProcess/Postprocess-unbiased-mean-std.py -> TransportMaps-3.0a0/Examples/research/LazyMaps/LogGaussianCoxProcess
copying Examples/research/LazyMaps/LogGaussianCoxProcess/TestData.py -> TransportMaps-3.0a0/Examples/research/LazyMaps/LogGaussianCoxProcess
copying Examples/research/LazyMaps/LogGaussianCoxProcess/postprocess-convergence-random-rotations.py -> TransportMaps-3.0a0/Examples/research/LazyMaps/LogGaussianCoxProcess
copying Examples/research/LazyMaps/LogGaussianCoxProcess/postprocess-convergence.py -> TransportMaps-3.0a0/Examples/research/LazyMaps/LogGaussianCoxProcess
copying Examples/research/LazyMaps/LogGaussianCoxProcess/postprocess-plotting.py -> TransportMaps-3.0a0/Examples/research/LazyMaps/LogGaussianCoxProcess
copying Examples/research/LazyMaps/LogGaussianCoxProcess/postprocess-spectrum.py -> TransportMaps-3.0a0/Examples/research/LazyMaps/LogGaussianCoxProcess
copying Examples/research/LazyMaps/banana/banana.py -> TransportMaps-3.0a0/Examples/research/LazyMaps/banana
copying Examples/research/LazyMaps/cantilever-timoshenko/postprocess.py -> TransportMaps-3.0a0/Examples/research/LazyMaps/cantilever-timoshenko
copying Examples/research/LazyMaps/euler-bernoulli/EulerBernoulliDistributions.py -> TransportMaps-3.0a0/Examples/research/LazyMaps/euler-bernoulli
copying Examples/research/LazyMaps/euler-bernoulli/test_distribution.py -> TransportMaps-3.0a0/Examples/research/LazyMaps/euler-bernoulli
copying Examples/research/LazyMaps/parkinson/GenerateDistribution.py -> TransportMaps-3.0a0/Examples/research/LazyMaps/parkinson
copying Examples/research/LazyMaps/parkinson/posterior-predictive-check.py -> TransportMaps-3.0a0/Examples/research/LazyMaps/parkinson
copying Examples/research/LazyMaps/poisson/postprocess-convergence.py -> TransportMaps-3.0a0/Examples/research/LazyMaps/poisson
copying Examples/research/LazyMaps/poisson/postprocess-plotting.py -> TransportMaps-3.0a0/Examples/research/LazyMaps/poisson
copying Examples/research/LazyMaps/poisson/runner.py -> TransportMaps-3.0a0/Examples/research/LazyMaps/poisson
copying Examples/research/LazyMaps/poisson/visualize_distribution.py -> TransportMaps-3.0a0/Examples/research/LazyMaps/poisson
copying Examples/research/LazyMaps/stan-spelling/GenerateDistribution.py -> TransportMaps-3.0a0/Examples/research/LazyMaps/stan-spelling
copying Examples/stable/BODmodel/DataGeneration.py -> TransportMaps-3.0a0/Examples/stable/BODmodel
copying Examples/stable/CPP-Module/KLdivergence-InverseMap-InverseConstruction.py -> TransportMaps-3.0a0/Examples/stable/CPP-Module
copying Examples/stable/CPP-Module/xun/setup.py -> TransportMaps-3.0a0/Examples/stable/CPP-Module/xun
copying Examples/stable/CPP-Module/xun/tests/test.py -> TransportMaps-3.0a0/Examples/stable/CPP-Module/xun/tests
copying Examples/stable/StochasticVolatility/DataGeneration.py -> TransportMaps-3.0a0/Examples/stable/StochasticVolatility
copying Examples/stable/StochasticVolatility/PlotExchanges.py -> TransportMaps-3.0a0/Examples/stable/StochasticVolatility
copying Examples/stable/StochasticVolatility/mcmc.py -> TransportMaps-3.0a0/Examples/stable/StochasticVolatility
copying Examples/stable/StochasticVolatility/postprocess-plotting.py -> TransportMaps-3.0a0/Examples/stable/StochasticVolatility
copying Examples/stable/TestDistributions/KLdivergence-InverseMap-DirectConstruction-ByStep.py -> TransportMaps-3.0a0/Examples/stable/TestDistributions
copying Examples/stable/TestDistributions/KLdivergence-InverseMap-DirectConstruction.py -> TransportMaps-3.0a0/Examples/stable/TestDistributions
copying Examples/stable/TestDistributions/KLdivergence-InverseMap-InverseConstruction.py -> TransportMaps-3.0a0/Examples/stable/TestDistributions
copying Examples/stable/TestDistributions/KLdivergence.py -> TransportMaps-3.0a0/Examples/stable/TestDistributions
copying Examples/stable/TestDistributions/Regression.py -> TransportMaps-3.0a0/Examples/stable/TestDistributions
copying Examples/stable/cluster/voyager/run_unit_tests.py -> TransportMaps-3.0a0/Examples/stable/cluster/voyager
copying TransportMaps/Defaults.py -> TransportMaps-3.0a0/TransportMaps
copying TransportMaps/DerivativesChecks.py -> TransportMaps-3.0a0/TransportMaps
copying TransportMaps/External.py -> TransportMaps-3.0a0/TransportMaps
copying TransportMaps/FiniteDifference.py -> TransportMaps-3.0a0/TransportMaps
copying TransportMaps/LaplaceApproximationRoutines.py -> TransportMaps-3.0a0/TransportMaps
copying TransportMaps/Misc.py -> TransportMaps-3.0a0/TransportMaps
copying TransportMaps/ObjectBase.py -> TransportMaps-3.0a0/TransportMaps
copying TransportMaps/Routines.py -> TransportMaps-3.0a0/TransportMaps
copying TransportMaps/__init__.py -> TransportMaps-3.0a0/TransportMaps
copying TransportMaps/_version.py -> TransportMaps-3.0a0/TransportMaps
copying TransportMaps.egg-info/PKG-INFO -> TransportMaps-3.0a0/TransportMaps.egg-info
copying TransportMaps.egg-info/SOURCES.txt -> TransportMaps-3.0a0/TransportMaps.egg-info
copying TransportMaps.egg-info/dependency_links.txt -> TransportMaps-3.0a0/TransportMaps.egg-info
copying TransportMaps.egg-info/not-zip-safe -> TransportMaps-3.0a0/TransportMaps.egg-info
copying TransportMaps.egg-info/requires.txt -> TransportMaps-3.0a0/TransportMaps.egg-info
copying TransportMaps.egg-info/top_level.txt -> TransportMaps-3.0a0/TransportMaps.egg-info
copying TransportMaps/Algorithms/__init__.py -> TransportMaps-3.0a0/TransportMaps/Algorithms
copying TransportMaps/Algorithms/Adaptivity/KullbackLeiblerAdaptivity.py -> TransportMaps-3.0a0/TransportMaps/Algorithms/Adaptivity
copying TransportMaps/Algorithms/Adaptivity/RegressionAdaptivity.py -> TransportMaps-3.0a0/TransportMaps/Algorithms/Adaptivity
copying TransportMaps/Algorithms/Adaptivity/__init__.py -> TransportMaps-3.0a0/TransportMaps/Algorithms/Adaptivity
copying TransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapFactories.py -> TransportMaps-3.0a0/TransportMaps/Algorithms/DeepLazyMaps
copying TransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapsConstructionBase.py -> TransportMaps-3.0a0/TransportMaps/Algorithms/DeepLazyMaps
copying TransportMaps/Algorithms/DeepLazyMaps/__init__.py -> TransportMaps-3.0a0/TransportMaps/Algorithms/DeepLazyMaps
copying TransportMaps/Algorithms/SequentialInference/LinearSequentialInference.py -> TransportMaps-3.0a0/TransportMaps/Algorithms/SequentialInference
copying TransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.py -> TransportMaps-3.0a0/TransportMaps/Algorithms/SequentialInference
copying TransportMaps/Algorithms/SequentialInference/SequentialInferenceBase.py -> TransportMaps-3.0a0/TransportMaps/Algorithms/SequentialInference
copying TransportMaps/Algorithms/SequentialInference/__init__.py -> TransportMaps-3.0a0/TransportMaps/Algorithms/SequentialInference
copying TransportMaps/Algorithms/SparsityIdentification/GeneralizedPrecision.py -> TransportMaps-3.0a0/TransportMaps/Algorithms/SparsityIdentification
copying TransportMaps/Algorithms/SparsityIdentification/NodeOrdering.py -> TransportMaps-3.0a0/TransportMaps/Algorithms/SparsityIdentification
copying TransportMaps/Algorithms/SparsityIdentification/RegularizedMap.py -> TransportMaps-3.0a0/TransportMaps/Algorithms/SparsityIdentification
copying TransportMaps/Algorithms/SparsityIdentification/SparsityIdentificationNonGaussian.py -> TransportMaps-3.0a0/TransportMaps/Algorithms/SparsityIdentification
copying TransportMaps/Algorithms/SparsityIdentification/__init__.py -> TransportMaps-3.0a0/TransportMaps/Algorithms/SparsityIdentification
copying TransportMaps/Builders/BuilderBase.py -> TransportMaps-3.0a0/TransportMaps/Builders
copying TransportMaps/Builders/__init__.py -> TransportMaps-3.0a0/TransportMaps/Builders
copying TransportMaps/CLI/AdaptivityPostprocessBase.py -> TransportMaps-3.0a0/TransportMaps/CLI
copying TransportMaps/CLI/AvailableOptions.py -> TransportMaps-3.0a0/TransportMaps/CLI
copying TransportMaps/CLI/ConstructionScriptBase.py -> TransportMaps-3.0a0/TransportMaps/CLI
copying TransportMaps/CLI/DeepLazyMapsConstructionScriptBase.py -> TransportMaps-3.0a0/TransportMaps/CLI
copying TransportMaps/CLI/PostprocessBase.py -> TransportMaps-3.0a0/TransportMaps/CLI
copying TransportMaps/CLI/ScriptBase.py -> TransportMaps-3.0a0/TransportMaps/CLI
copying TransportMaps/CLI/SequentialPostprocessBase.py -> TransportMaps-3.0a0/TransportMaps/CLI
copying TransportMaps/CLI/__init__.py -> TransportMaps-3.0a0/TransportMaps/CLI
copying TransportMaps/DOLFIN/SolverBase.py -> TransportMaps-3.0a0/TransportMaps/DOLFIN
copying TransportMaps/DOLFIN/__init__.py -> TransportMaps-3.0a0/TransportMaps/DOLFIN
copying TransportMaps/Densities/Densities.py -> TransportMaps-3.0a0/TransportMaps/Densities
copying TransportMaps/Densities/__init__.py -> TransportMaps-3.0a0/TransportMaps/Densities
copying TransportMaps/Densities/Decomposable/SequentialInferenceDensities.py -> TransportMaps-3.0a0/TransportMaps/Densities/Decomposable
copying TransportMaps/Densities/Decomposable/__init__.py -> TransportMaps-3.0a0/TransportMaps/Densities/Decomposable
copying TransportMaps/Densities/Inference/InferenceBase.py -> TransportMaps-3.0a0/TransportMaps/Densities/Inference
copying TransportMaps/Densities/Inference/__init__.py -> TransportMaps-3.0a0/TransportMaps/Densities/Inference
copying TransportMaps/Diagnostics/Plotting.py -> TransportMaps-3.0a0/TransportMaps/Diagnostics
copying TransportMaps/Diagnostics/Routines.py -> TransportMaps-3.0a0/TransportMaps/Diagnostics
copying TransportMaps/Diagnostics/Validators.py -> TransportMaps-3.0a0/TransportMaps/Diagnostics
copying TransportMaps/Diagnostics/__init__.py -> TransportMaps-3.0a0/TransportMaps/Diagnostics
copying TransportMaps/Distributions/ConditionalDistributionBase.py -> TransportMaps-3.0a0/TransportMaps/Distributions
copying TransportMaps/Distributions/ConditionalDistributions.py -> TransportMaps-3.0a0/TransportMaps/Distributions
copying TransportMaps/Distributions/Deprecated.py -> TransportMaps-3.0a0/TransportMaps/Distributions
copying TransportMaps/Distributions/DistributionBase.py -> TransportMaps-3.0a0/TransportMaps/Distributions
copying TransportMaps/Distributions/DistributionFromSamplesBase.py -> TransportMaps-3.0a0/TransportMaps/Distributions
copying TransportMaps/Distributions/FactorizedDistributionBase.py -> TransportMaps-3.0a0/TransportMaps/Distributions
copying TransportMaps/Distributions/FrozenDistributions.py -> TransportMaps-3.0a0/TransportMaps/Distributions
copying TransportMaps/Distributions/ParametricDistributionBase.py -> TransportMaps-3.0a0/TransportMaps/Distributions
copying TransportMaps/Distributions/ParametricTransportMapDistributionBase.py -> TransportMaps-3.0a0/TransportMaps/Distributions
copying TransportMaps/Distributions/ParametricTransportMapDistributions.py -> TransportMaps-3.0a0/TransportMaps/Distributions
copying TransportMaps/Distributions/ProductDistributionBase.py -> TransportMaps-3.0a0/TransportMaps/Distributions
copying TransportMaps/Distributions/TransportMapDistributionBase.py -> TransportMaps-3.0a0/TransportMaps/Distributions
copying TransportMaps/Distributions/TransportMapDistributions.py -> TransportMaps-3.0a0/TransportMaps/Distributions
copying TransportMaps/Distributions/__init__.py -> TransportMaps-3.0a0/TransportMaps/Distributions
copying TransportMaps/Distributions/Decomposable/LinearGaussianSequentialInferenceDistributions.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Decomposable
copying TransportMaps/Distributions/Decomposable/SequentialInferenceDistributions.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Decomposable
copying TransportMaps/Distributions/Decomposable/__init__.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Decomposable
copying TransportMaps/Distributions/Examples/SimpleDistributions.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples
copying TransportMaps/Distributions/Examples/__init__.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples
copying TransportMaps/Distributions/Examples/BiochemicalOxygenDemand/BODDistributions.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/BiochemicalOxygenDemand
copying TransportMaps/Distributions/Examples/BiochemicalOxygenDemand/__init__.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/BiochemicalOxygenDemand
copying TransportMaps/Distributions/Examples/BurgersPDE/BurgersDistributions.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/BurgersPDE
copying TransportMaps/Distributions/Examples/BurgersPDE/BurgersProblems.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/BurgersPDE
copying TransportMaps/Distributions/Examples/BurgersPDE/__init__.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/BurgersPDE
copying TransportMaps/Distributions/Examples/InertialNavigationSystem/INSDistributions.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/InertialNavigationSystem
copying TransportMaps/Distributions/Examples/InertialNavigationSystem/__init__.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/InertialNavigationSystem
copying TransportMaps/Distributions/Examples/LogGaussianCoxProcess/LogGaussianCoxProcessDistributions.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/LogGaussianCoxProcess
copying TransportMaps/Distributions/Examples/LogGaussianCoxProcess/__init__.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/LogGaussianCoxProcess
copying TransportMaps/Distributions/Examples/Lorenz63/Lorenz63Distributions.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/Lorenz63
copying TransportMaps/Distributions/Examples/Lorenz63/__init__.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/Lorenz63
copying TransportMaps/Distributions/Examples/Lorenz96/Lorenz96Distributions.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/Lorenz96
copying TransportMaps/Distributions/Examples/Lorenz96/__init__.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/Lorenz96
copying TransportMaps/Distributions/Examples/Lorenz96/fast_eval.pyx -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/Lorenz96
copying TransportMaps/Distributions/Examples/PoissonProblem/PoissonDistributions.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/PoissonProblem
copying TransportMaps/Distributions/Examples/PoissonProblem/PoissonProblems.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/PoissonProblem
copying TransportMaps/Distributions/Examples/PoissonProblem/__init__.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/PoissonProblem
copying TransportMaps/Distributions/Examples/RailwayVehicleDynamics/__init__.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/RailwayVehicleDynamics
copying TransportMaps/Distributions/Examples/RailwayVehicleDynamics/Coradia175/Coradia175VehicleParametersEstimation.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/RailwayVehicleDynamics/Coradia175
copying TransportMaps/Distributions/Examples/RailwayVehicleDynamics/Coradia175/Coradia175VehicleStateSpace.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/RailwayVehicleDynamics/Coradia175
copying TransportMaps/Distributions/Examples/RailwayVehicleDynamics/Coradia175/__init__.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/RailwayVehicleDynamics/Coradia175
copying TransportMaps/Distributions/Examples/ScalarLinearGaussMarkovProcess/Distributions.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/ScalarLinearGaussMarkovProcess
copying TransportMaps/Distributions/Examples/ScalarLinearGaussMarkovProcess/__init__.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/ScalarLinearGaussMarkovProcess
copying TransportMaps/Distributions/Examples/StochasticVolatility/StocVolHyperDistributions.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/StochasticVolatility
copying TransportMaps/Distributions/Examples/StochasticVolatility/__init__.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/StochasticVolatility
copying TransportMaps/Distributions/Examples/Timoshenko/TimoshenkoDistributions.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/Timoshenko
copying TransportMaps/Distributions/Examples/Timoshenko/TimoshenkoProblems.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/Timoshenko
copying TransportMaps/Distributions/Examples/Timoshenko/__init__.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Examples/Timoshenko
copying TransportMaps/Distributions/Inference/InferenceBase.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Inference
copying TransportMaps/Distributions/Inference/__init__.py -> TransportMaps-3.0a0/TransportMaps/Distributions/Inference
copying TransportMaps/Functionals/__init__.py -> TransportMaps-3.0a0/TransportMaps/Functionals
copying TransportMaps/Likelihoods/LikelihoodBase.py -> TransportMaps-3.0a0/TransportMaps/Likelihoods
copying TransportMaps/Likelihoods/__init__.py -> TransportMaps-3.0a0/TransportMaps/Likelihoods
copying TransportMaps/LinAlg/__init__.py -> TransportMaps-3.0a0/TransportMaps/LinAlg
copying TransportMaps/LinAlg/_linalg.py -> TransportMaps-3.0a0/TransportMaps/LinAlg
copying TransportMaps/Maps/AffineMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/AffineTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/AffineTriangularMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/ComponentwiseMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/ComponentwiseTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/ConditionalTriangularTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/ConstantMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/Defaults.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/DeprecatedConditionallyLinearMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/DiagonalComponentwiseTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/DiagonalIsotropicTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/FrozenTriangularTransportMaps.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/IdentityEmbeddedParametricTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/IdentityEmbeddedTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/IdentityParametricTriangularComponentwiseTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/IdentityTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/IntegratedExponentialParametricTriangularComponentwiseTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/IntegratedSquaredParametricTriangularComponentwiseTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/InverseMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/InverseParametricMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/InverseParametricTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/InverseTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/LinearSpanParametricTriangularComponentwiseMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/ListCompositeMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/ListCompositeTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/ListStackedMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/ListStackedParametricMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/ListStackedParametricTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/ListStackedTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/MapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/MapFactoryBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/MiscMaps.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/NonMonotoneLinearSpanParametricTriangularComponentwiseTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/ParametricComponentwiseMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/ParametricComponentwiseTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/ParametricMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/ParametricTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/ParametricTriangularComponentwiseMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/ParametricTriangularComponentwiseTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/PermutationTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/SlicedMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/SlicedTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/TransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/TriangularComponentwiseMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/TriangularComponentwiseTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/TriangularListStackedParametricTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/TriangularListStackedTransportMapBase.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/__init__.py -> TransportMaps-3.0a0/TransportMaps/Maps
copying TransportMaps/Maps/Decomposable/SequentialInferenceMapFactoryBase.py -> TransportMaps-3.0a0/TransportMaps/Maps/Decomposable
copying TransportMaps/Maps/Decomposable/SequentialInferenceMaps.py -> TransportMaps-3.0a0/TransportMaps/Maps/Decomposable
copying TransportMaps/Maps/Decomposable/__init__.py -> TransportMaps-3.0a0/TransportMaps/Maps/Decomposable
copying TransportMaps/Maps/Functionals/AnchoredIntegratedSquaredParametricFunctionalBase.py -> TransportMaps-3.0a0/TransportMaps/Maps/Functionals
copying TransportMaps/Maps/Functionals/FrozenMonotonicFunctions.py -> TransportMaps-3.0a0/TransportMaps/Maps/Functionals
copying TransportMaps/Maps/Functionals/FunctionalBase.py -> TransportMaps-3.0a0/TransportMaps/Maps/Functionals
copying TransportMaps/Maps/Functionals/IdentityParametricMonotoneFunctionalBase.py -> TransportMaps-3.0a0/TransportMaps/Maps/Functionals
copying TransportMaps/Maps/Functionals/IntegratedExponentialParametricMonotoneFunctionalBase.py -> TransportMaps-3.0a0/TransportMaps/Maps/Functionals
copying TransportMaps/Maps/Functionals/IntegratedSquaredParametricMonotoneFunctionalBase.py -> TransportMaps-3.0a0/TransportMaps/Maps/Functionals
copying TransportMaps/Maps/Functionals/LinearSpanTensorizedParametricFunctionalBase.py -> TransportMaps-3.0a0/TransportMaps/Maps/Functionals
copying TransportMaps/Maps/Functionals/MonotoneFunctionalBase.py -> TransportMaps-3.0a0/TransportMaps/Maps/Functionals
copying TransportMaps/Maps/Functionals/ParametricFunctionalBase.py -> TransportMaps-3.0a0/TransportMaps/Maps/Functionals
copying TransportMaps/Maps/Functionals/ParametricMonotoneFunctionalBase.py -> TransportMaps-3.0a0/TransportMaps/Maps/Functionals
copying TransportMaps/Maps/Functionals/PointwiseMonotoneLinearSpanTensorizedParametricFunctionalBase.py -> TransportMaps-3.0a0/TransportMaps/Maps/Functionals
copying TransportMaps/Maps/Functionals/ProductDistributionParametricPullbackComponentFunctionBase.py -> TransportMaps-3.0a0/TransportMaps/Maps/Functionals
copying TransportMaps/Maps/Functionals/TensorizedParametricFunctionalBase.py -> TransportMaps-3.0a0/TransportMaps/Maps/Functionals
copying TransportMaps/Maps/Functionals/__init__.py -> TransportMaps-3.0a0/TransportMaps/Maps/Functionals
copying TransportMaps/Maps/ODEs/DiscretizedODEsMaps.py -> TransportMaps-3.0a0/TransportMaps/Maps/ODEs
copying TransportMaps/Maps/ODEs/__init__.py -> TransportMaps-3.0a0/TransportMaps/Maps/ODEs
copying TransportMaps/Optimization/Optimizers.py -> TransportMaps-3.0a0/TransportMaps/Optimization
copying TransportMaps/Optimization/__init__.py -> TransportMaps-3.0a0/TransportMaps/Optimization
copying TransportMaps/RandomizedLinearAlgebra/RandomizedLinearAlgebra.py -> TransportMaps-3.0a0/TransportMaps/RandomizedLinearAlgebra
copying TransportMaps/RandomizedLinearAlgebra/__init__.py -> TransportMaps-3.0a0/TransportMaps/RandomizedLinearAlgebra
copying TransportMaps/Samplers/IndependentSamplers.py -> TransportMaps-3.0a0/TransportMaps/Samplers
copying TransportMaps/Samplers/MarkovChainSamplers.py -> TransportMaps-3.0a0/TransportMaps/Samplers
copying TransportMaps/Samplers/Routines.py -> TransportMaps-3.0a0/TransportMaps/Samplers
copying TransportMaps/Samplers/SamplerBase.py -> TransportMaps-3.0a0/TransportMaps/Samplers
copying TransportMaps/Samplers/__init__.py -> TransportMaps-3.0a0/TransportMaps/Samplers
copying TransportMaps/Samplers/puwr.py -> TransportMaps-3.0a0/TransportMaps/Samplers
copying TransportMaps/XML/Parser.py -> TransportMaps-3.0a0/TransportMaps/XML
copying TransportMaps/XML/__init__.py -> TransportMaps-3.0a0/TransportMaps/XML
copying TransportMaps/XML/schema/map.xsd -> TransportMaps-3.0a0/TransportMaps/XML/schema
copying TransportMaps/tests/TestFunctions.py -> TransportMaps-3.0a0/TransportMaps/tests
copying TransportMaps/tests/__init__.py -> TransportMaps-3.0a0/TransportMaps/tests
copying TransportMaps/tests/test_L2_minimization.py -> TransportMaps-3.0a0/TransportMaps/tests
copying TransportMaps/tests/test_L2_misfit.py -> TransportMaps-3.0a0/TransportMaps/tests
copying TransportMaps/tests/test_all.py -> TransportMaps-3.0a0/TransportMaps/tests
copying TransportMaps/tests/test_distributions.py -> TransportMaps-3.0a0/TransportMaps/tests
copying TransportMaps/tests/test_functions.py -> TransportMaps-3.0a0/TransportMaps/tests
copying TransportMaps/tests/test_kl_divergence.py -> TransportMaps-3.0a0/TransportMaps/tests
copying TransportMaps/tests/test_kl_minimization.py -> TransportMaps-3.0a0/TransportMaps/tests
copying TransportMaps/tests/test_laplace.py -> TransportMaps-3.0a0/TransportMaps/tests
copying TransportMaps/tests/test_rla.py -> TransportMaps-3.0a0/TransportMaps/tests
copying TransportMaps/tests/test_scripts.py -> TransportMaps-3.0a0/TransportMaps/tests
copying TransportMaps/tests/test_sequential_inference.py -> TransportMaps-3.0a0/TransportMaps/tests
copying TransportMaps/tests/test_transportmap_distributions.py -> TransportMaps-3.0a0/TransportMaps/tests
copying TransportMaps/tests/test_transportmap_distributions_sampling.py -> TransportMaps-3.0a0/TransportMaps/tests
copying TransportMaps/tests/test_transportmaps.py -> TransportMaps-3.0a0/TransportMaps/tests
copying TransportMaps/tests/xml/maps/FullOrdIntExpLinearMap_5d.xml -> TransportMaps-3.0a0/TransportMaps/tests/xml/maps
copying TransportMaps/tests/xml/maps/FullOrdIntExpNonLinearHeadMap_5d.xml -> TransportMaps-3.0a0/TransportMaps/tests/xml/maps
copying TransportMaps/tests/xml/maps/FullOrdIntExpNonLinearMap_5d.xml -> TransportMaps-3.0a0/TransportMaps/tests/xml/maps
copying TransportMaps/tests/xml/maps/FullOrdIntExpTriDiagonalMap_5d.xml -> TransportMaps-3.0a0/TransportMaps/tests/xml/maps
copying TransportMaps/tests/xml/maps/FullOrdMonotLinearSpanLinearMap_5d.xml -> TransportMaps-3.0a0/TransportMaps/tests/xml/maps
copying TransportMaps/tests/xml/maps/MultiIdxMonotLinearSpanLinearMap_5d.xml -> TransportMaps-3.0a0/TransportMaps/tests/xml/maps
copying TransportMaps/tests/xml/maps/TotalOrdIntExpDiagonalMap_5d.xml -> TransportMaps-3.0a0/TransportMaps/tests/xml/maps
copying TransportMaps/tests/xml/maps/TotalOrdIntExpLinearMap_5d.xml -> TransportMaps-3.0a0/TransportMaps/tests/xml/maps
copying TransportMaps/tests/xml/maps/TotalOrdIntExpNonLinearHeadMap_5d.xml -> TransportMaps-3.0a0/TransportMaps/tests/xml/maps
copying TransportMaps/tests/xml/maps/TotalOrdIntExpNonLinearMap_5d.xml -> TransportMaps-3.0a0/TransportMaps/tests/xml/maps
copying TransportMaps/tests/xml/maps/TotalOrdIntExpNonLinearRBFMap_5d.xml -> TransportMaps-3.0a0/TransportMaps/tests/xml/maps
copying TransportMaps/tests/xml/maps/TotalOrdIntExpTriDiagonalMap_5d.xml -> TransportMaps-3.0a0/TransportMaps/tests/xml/maps
copying TransportMaps/tests/xml/maps/TotalOrdIntSqLinearMap_5d.xml -> TransportMaps-3.0a0/TransportMaps/tests/xml/maps
copying TransportMaps/tests/xml/maps/TotalOrdIntSqNonLinearHeadMap_5d.xml -> TransportMaps-3.0a0/TransportMaps/tests/xml/maps
copying TransportMaps/tests/xml/maps/TotalOrdMonotLinearSpanLinearMap_5d.xml -> TransportMaps-3.0a0/TransportMaps/tests/xml/maps
copying scripts/tmap-adaptivity-postprocess -> TransportMaps-3.0a0/scripts
copying scripts/tmap-deep-lazy-tm -> TransportMaps-3.0a0/scripts
copying scripts/tmap-deep-lazy-trim -> TransportMaps-3.0a0/scripts
copying scripts/tmap-laplace -> TransportMaps-3.0a0/scripts
copying scripts/tmap-load-dill -> TransportMaps-3.0a0/scripts
copying scripts/tmap-max-likelihood -> TransportMaps-3.0a0/scripts
copying scripts/tmap-postprocess -> TransportMaps-3.0a0/scripts
copying scripts/tmap-sequential-postprocess -> TransportMaps-3.0a0/scripts
copying scripts/tmap-sequential-tm -> TransportMaps-3.0a0/scripts
copying scripts/tmap-tm -> TransportMaps-3.0a0/scripts
Writing TransportMaps-3.0a0/setup.cfg
Creating tar archive
removing 'TransportMaps-3.0a0' (and everything under it)
+ cd tmp_sdist
+ echo Installing
Installing
++ ls
+ INSTALLER=TransportMaps-3.0a0.tar.gz
+ PIP_FLAGS=--no-cache-dir
+ CC=clang
+ MPI=False
+ H5PY=True
+ python /jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds/PYTHON_EXE/python2/VENV_SYS/virtualenv/venv_TransportMaps-private-develop_python2/bin/pip install --upgrade TransportMaps-3.0a0.tar.gz
DEPRECATION: Python 2.7 will reach the end of its life on January 1st, 2020. Please upgrade your Python as Python 2.7 won't be maintained after that date. A future version of pip will drop support for Python 2.7. More details about Python 2 support in pip, can be found at https://pip.pypa.io/en/latest/development/release-process/#python-2-support
Processing ./TransportMaps-3.0a0.tar.gz
Requirement already satisfied, skipping upgrade: numpy>=1.15 in /jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds/PYTHON_EXE/python2/VENV_SYS/virtualenv/venv_TransportMaps-private-develop_python2/lib/python2.7/site-packages (from TransportMaps==3.0a0) (1.16.5)
Processing /home/jenkins/.cache/pip/wheels/08/d1/78/bb76eed0589a31eaf4d7f62b3a53ab79c6d4619d99dcf96c0b/orthpol_light-1.0.1-cp27-cp27mu-linux_x86_64.whl
Collecting scipy
  Using cached https://files.pythonhosted.org/packages/1d/f6/7c16d60aeb3694e5611976cb4f1eaf1c6b7f1e7c55771d691013405a02ea/scipy-1.2.2-cp27-cp27mu-manylinux1_x86_64.whl
Processing /home/jenkins/.cache/pip/wheels/c8/6c/62/1a4aa12e4622f93d036dc48051256c84838bcf5c56557e68e9/SpectralToolbox-1.0.12-cp27-cp27mu-linux_x86_64.whl
Processing /home/jenkins/.cache/pip/wheels/59/b1/91/f02e76c732915c4015ab4010f3015469866c1eb9b14058d8e7/dill-0.3.1.1-cp27-none-any.whl
Processing /home/jenkins/.cache/pip/wheels/e2/9a/ab/067414de0670f95436345d4ef33337d511a47aabc6c3307062/scikit_sparse-0.4.4-cp27-cp27mu-linux_x86_64.whl
Collecting sortedcontainers
  Using cached https://files.pythonhosted.org/packages/13/f3/cf85f7c3a2dbd1a515d51e1f1676d971abe41bba6f4ab5443240d9a78e5b/sortedcontainers-2.1.0-py2.py3-none-any.whl
Processing /home/jenkins/.cache/pip/wheels/60/cb/22/4a1e28238c4ab248b15c840b299b41c242751ca66b53b9503b/semilattices-0.9.0rc2-cp27-none-any.whl
Collecting tqdm
  Using cached https://files.pythonhosted.org/packages/a5/13/cd55c23e3e158ed5b87cae415ee3844fc54cb43803fa3a0a064d23ecb883/tqdm-4.40.0-py2.py3-none-any.whl
Collecting fasteners
  Using cached https://files.pythonhosted.org/packages/18/bd/55eb2d6397b9c0e263af9d091ebdb756b15756029b3cededf6461481bc63/fasteners-0.15-py2.py3-none-any.whl
Processing /home/jenkins/.cache/pip/wheels/18/e0/86/2b713dd512199096012ceca61429e12b960888de59818871d6/mpi4py-3.0.3-cp27-cp27mu-linux_x86_64.whl
Collecting h5py
  Using cached https://files.pythonhosted.org/packages/12/90/3216b8f6d69905a320352a9ca6802a8e39fdb1cd93133c3d4163db8d5f19/h5py-2.10.0-cp27-cp27mu-manylinux1_x86_64.whl
Collecting six
  Using cached https://files.pythonhosted.org/packages/65/26/32b8464df2a97e6dd1b656ed26b2c194606c16fe163c695a992b36c11cdf/six-1.13.0-py2.py3-none-any.whl
Collecting future-fstrings
  Using cached https://files.pythonhosted.org/packages/ab/6d/ea1d52e9038558dd37f5d30647eb9f07888c164960a5d4daa5f970c6da25/future_fstrings-1.2.0-py2.py3-none-any.whl
Collecting monotonic>=0.1
  Using cached https://files.pythonhosted.org/packages/ac/aa/063eca6a416f397bd99552c534c6d11d57f58f2e94c14780f3bbf818c4cf/monotonic-1.5-py2.py3-none-any.whl
Collecting tokenize-rt>=3; python_version < "3.6"
  Using cached https://files.pythonhosted.org/packages/a9/50/1983329a9b82496326627bfb44d2f2604913311fe6d9aa426aa4261351ea/tokenize_rt-3.2.0-py2.py3-none-any.whl
Collecting typing; python_version == "2.7"
  Using cached https://files.pythonhosted.org/packages/22/30/64ca29543375759dc589ade14a6cd36382abf2bec17d67de8481bc9814d7/typing-3.7.4.1-py2-none-any.whl
Building wheels for collected packages: TransportMaps
  Building wheel for TransportMaps (setup.py): started
  Building wheel for TransportMaps (setup.py): finished with status 'done'
  Created wheel for TransportMaps: filename=TransportMaps-3.0a0-cp27-none-any.whl size=607504 sha256=7cf76c467a6b06710af2cf4e502960289be11ae868d9c5269ef5fd06194fa044
  Stored in directory: /home/jenkins/.cache/pip/wheels/aa/f0/7a/b55a348a68e582ad5a14ac88242c94b01348d8d41fefed4537
Successfully built TransportMaps
Installing collected packages: orthpol-light, scipy, SpectralToolbox, dill, scikit-sparse, sortedcontainers, six, typing, tokenize-rt, future-fstrings, semilattices, tqdm, monotonic, fasteners, mpi4py, h5py, TransportMaps
Successfully installed SpectralToolbox-1.0.12 TransportMaps-3.0a0 dill-0.3.1.1 fasteners-0.15 future-fstrings-1.2.0 h5py-2.10.0 monotonic-1.5 mpi4py-3.0.3 orthpol-light-1.0.1 scikit-sparse-0.4.4 scipy-1.2.2 semilattices-0.9.0rc2 six-1.13.0 sortedcontainers-2.1.0 tokenize-rt-3.2.0 tqdm-4.40.0 typing-3.7.4.1
+ echo 'Running tests'
Running tests
+ python -m unittest -v -f TransportMaps
/jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds/PYTHON_EXE/python2/VENV_SYS/virtualenv/venv_TransportMaps-private-develop_python2/local/lib/python2.7/site-packages/TransportMaps/External.py:40: UserWarning: MPI support disabled: install mpi4py and mpi_map if needed.
  warnings.warn("MPI support disabled: install mpi4py and mpi_map if needed.")
Traceback (most recent call last):
  File "/usr/lib/python2.7/runpy.py", line 174, in _run_module_as_main
    "__main__", fname, loader, pkg_name)
  File "/usr/lib/python2.7/runpy.py", line 72, in _run_code
    exec code in run_globals
  File "/usr/lib/python2.7/unittest/__main__.py", line 12, in <module>
    main(module=None)
  File "/usr/lib/python2.7/unittest/main.py", line 94, in __init__
    self.parseArgs(argv)
  File "/usr/lib/python2.7/unittest/main.py", line 149, in parseArgs
    self.createTests()
  File "/usr/lib/python2.7/unittest/main.py", line 158, in createTests
    self.module)
  File "/usr/lib/python2.7/unittest/loader.py", line 130, in loadTestsFromNames
    suites = [self.loadTestsFromName(name, module) for name in names]
  File "/usr/lib/python2.7/unittest/loader.py", line 91, in loadTestsFromName
    module = __import__('.'.join(parts_copy))
  File "/jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds/PYTHON_EXE/python2/VENV_SYS/virtualenv/venv_TransportMaps-private-develop_python2/local/lib/python2.7/site-packages/TransportMaps/__init__.py", line 52, in <module>
    from . import Maps
  File "/jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds/PYTHON_EXE/python2/VENV_SYS/virtualenv/venv_TransportMaps-private-develop_python2/local/lib/python2.7/site-packages/TransportMaps/Maps/__init__.py", line 34, in <module>
    from . import Functionals
  File "/jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds/PYTHON_EXE/python2/VENV_SYS/virtualenv/venv_TransportMaps-private-develop_python2/local/lib/python2.7/site-packages/TransportMaps/Maps/Functionals/__init__.py", line 39, in <module>
    from . import LinearSpanTensorizedParametricFunctionalBase
  File "/jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds/PYTHON_EXE/python2/VENV_SYS/virtualenv/venv_TransportMaps-private-develop_python2/local/lib/python2.7/site-packages/TransportMaps/Maps/Functionals/LinearSpanTensorizedParametricFunctionalBase.py", line 35, in <module>
    import semilattices as SL
  File "/jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds/PYTHON_EXE/python2/VENV_SYS/virtualenv/venv_TransportMaps-private-develop_python2/local/lib/python2.7/site-packages/semilattices/__init__.py", line 31, in <module>
    from . import _datastructures
  File "/jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds/PYTHON_EXE/python2/VENV_SYS/virtualenv/venv_TransportMaps-private-develop_python2/local/lib/python2.7/site-packages/semilattices/_datastructures.py", line 48, in <module>
    from semilattices._misc import \
  File "/jenkins/workspace/TransportMaps-private-develop/COMPILER/clang/MACHINE/reynolds/PYTHON_EXE/python2/VENV_SYS/virtualenv/venv_TransportMaps-private-develop_python2/local/lib/python2.7/site-packages/semilattices/_misc.py", line 34, in <module>
    from builtins import super #for python3 compatability, python2 'future' is required to be installed
ImportError: No module named builtins
Build step 'Execute shell' marked build as failure
[WS-CLEANUP] Deleting project workspace...
[WS-CLEANUP] Skipped based on build state FAILURE
Finished: FAILURE