Started by BitBucket push by joshuawchenStarted by BitBucket push by joshuawchen867779cc167681b4b73d30ad1188ac9535c25af93e7779cc167681b4b73d30ad1188ac9535c25af93erefs/remotes/origin/develop/master7779cc167681b4b73d30ad1188ac9535c25af93e7779cc167681b4b73d30ad1188ac9535c25af93erefs/remotes/origin/develop/master7779cc167681b4b73d30ad1188ac9535c25af93e7779cc167681b4b73d30ad1188ac9535c25af93erefs/remotes/origin/develop/mastergit@bitbucket.org:dabi86/transportmaps-private.gitfalse#86166170736031819TransportMaps-private-develop #8686falsefalse86175082FAILURE1575393947958https://acdl.mit.edu/csi/job/TransportMaps-private-develop/86/reynoldsTransportMaps/Algorithms/SparsityIdentification/NodeOrdering.py2ddf3a6d7b1d892d04218fd4f20756aad79c37431523653184000https://acdl.mit.edu/csi/user/rebeccae.morrisonrebeccae.morrisonrebeccae.morrison@gmail.comlist to array fix in node ordering 2018-04-13 16:59:44 -04002ddf3a6d7b1d892d04218fd4f20756aad79c3743list to array fix in node orderingeditTransportMaps/Algorithms/SparsityIdentification/NodeOrdering.pyTransportMaps/Algorithms/SparsityIdentification/SparsityIdentificationNonGaussian.py9ea1407d421abecf95be0861c48c0882d38823421523653383000https://acdl.mit.edu/csi/user/rebeccae.morrisonrebeccae.morrisonrebeccae.morrison@gmail.comremoved testing statements from SING 2018-04-13 17:03:03 -04009ea1407d421abecf95be0861c48c0882d3882342removed testing statements from SINGeditTransportMaps/Algorithms/SparsityIdentification/SparsityIdentificationNonGaussian.pyExamples/research/sparsity/misc/multimodal_gp.py188476317084fdb480c5dd1c532f8f61d7b1cc391523895168000https://acdl.mit.edu/csi/user/rebeccae.morrisonrebeccae.morrisonrebeccae.morrison@gmail.commultimodal gp plot 2018-04-16 12:12:48 -0400188476317084fdb480c5dd1c532f8f61d7b1cc39multimodal gp plotaddExamples/research/sparsity/misc/multimodal_gp.pyExamples/research/sparsity/algorithm/run_sing_copula.pyExamples/research/sparsity/sgt/lapEigvecGraphs.pyExamples/research/sparsity/algorithm/run_sing_xstar.pyExamples/research/sparsity/misc/multimodal_gp.py8b1fe43bdd9feae0c246bc56f19330b548b1b4c31525375508000https://acdl.mit.edu/csi/user/rebeccae.morrisonrebeccae.morrisonrebeccae.morrison@gmail.comlaplacian eigenvector graphs 2018-05-03 15:25:08 -04008b1fe43bdd9feae0c246bc56f19330b548b1b4c3laplacian eigenvector graphseditExamples/research/sparsity/algorithm/run_sing_copula.pyeditExamples/research/sparsity/algorithm/run_sing_xstar.pyaddExamples/research/sparsity/sgt/lapEigvecGraphs.pyeditExamples/research/sparsity/misc/multimodal_gp.pyTransportMaps/Algorithms/Adaptivity/KullbackLeiblerAdaptivity.pyTransportMaps/Distributions/Examples/PoissonProblem/PoissonDistributions.pyTransportMaps/LaplaceApproximationRoutines.pyExamples/research/PoissonProblem/GaussianFieldDataGeneration.pyTransportMaps/Distributions/FrozenDistributions.pyscripts/tmap-laplaceTransportMaps/Distributions/Examples/PoissonProblem/PoissonProblems.pyTransportMaps/Maps/TransportMapBase.py4ad51f9ea2f28046d758ade0e987f3ad1d3baf591538077125000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itmodified truncation step to retain always old indices 2018-09-27 15:38:45 -04004ad51f9ea2f28046d758ade0e987f3ad1d3baf59modified truncation step to retain always old indiceseditTransportMaps/Distributions/Examples/PoissonProblem/PoissonProblems.pyeditTransportMaps/Maps/TransportMapBase.pyeditTransportMaps/LaplaceApproximationRoutines.pyeditExamples/research/PoissonProblem/GaussianFieldDataGeneration.pyeditTransportMaps/Distributions/Examples/PoissonProblem/PoissonDistributions.pyeditTransportMaps/Algorithms/Adaptivity/KullbackLeiblerAdaptivity.pyeditscripts/tmap-laplaceeditTransportMaps/Distributions/FrozenDistributions.pyTransportMaps/Algorithms/Adaptivity/KullbackLeiblerAdaptivity.pyTransportMaps/Maps/TransportMapBase.pyExamples/research/MonotoneTransport-paper/Banana/BananaPlots.py0391c627ff16241c8029745a49c38436ea22c8e81540237070000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itleft-over changes 2018-10-22 15:37:50 -04000391c627ff16241c8029745a49c38436ea22c8e8left-over changeseditExamples/research/MonotoneTransport-paper/Banana/BananaPlots.pyeditTransportMaps/Algorithms/Adaptivity/KullbackLeiblerAdaptivity.pyeditTransportMaps/Maps/TransportMapBase.pyExamples/research/LazyMaps/BOD/bod.pyTransportMaps/Distributions/Examples/BiochemicalOxygenDemand/BODDistributions.py43a03f58e407ee9b426ae3977c5afefe11e448e21540245413000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itstarted working on some examples 2018-10-22 17:56:53 -040043a03f58e407ee9b426ae3977c5afefe11e448e2started working on some examplesaddExamples/research/LazyMaps/BOD/bod.pyeditTransportMaps/Distributions/Examples/BiochemicalOxygenDemand/BODDistributions.pyTransportMaps/FiniteDifference.pyExamples/research/LazyMaps/euler-bernoulli/test_distribution.pyTransportMaps/LaplaceApproximationRoutines.pyExamples/research/LazyMaps/euler-bernoulli/EulerBernoulliDistributions.pyTransportMaps/Diagnostics/Plotting.pyf2f4c06489fb90681958559ea6e1299c7638b0ac1540329726000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on euler bernoulli 2018-10-23 17:22:06 -0400f2f4c06489fb90681958559ea6e1299c7638b0acworking on euler bernoulliaddExamples/research/LazyMaps/euler-bernoulli/EulerBernoulliDistributions.pyeditTransportMaps/FiniteDifference.pyaddExamples/research/LazyMaps/euler-bernoulli/test_distribution.pyeditTransportMaps/Diagnostics/Plotting.pyeditTransportMaps/LaplaceApproximationRoutines.pyTransportMaps/Distributions/Examples/BiochemicalOxygenDemand/BODDistributions.pyTransportMaps/Maps/FrozenTriangularTransportMaps.pyExamples/research/LazyMaps/BOD/bod_joint.pyExamples/research/LazyMaps/euler-bernoulli/test_distribution.pyTransportMaps/Maps/TransportMapBase.pyTransportMaps/Maps/MapBase.pyTransportMaps/Maps/SimpleTransportMaps.py1e26c191dc34450e9573fda5028ba055e41ecbcf1540431946000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on bod 2018-10-24 21:45:46 -04001e26c191dc34450e9573fda5028ba055e41ecbcfworking on bodeditExamples/research/LazyMaps/euler-bernoulli/test_distribution.pyeditTransportMaps/Maps/TransportMapBase.pyeditTransportMaps/Distributions/Examples/BiochemicalOxygenDemand/BODDistributions.pyeditTransportMaps/Maps/FrozenTriangularTransportMaps.pyaddExamples/research/LazyMaps/BOD/bod_joint.pyeditTransportMaps/Maps/MapBase.pyeditTransportMaps/Maps/SimpleTransportMaps.pyExamples/research/LazyMaps/BOD/bod_joint.py840f9c886d30ce09df25856a9515b6083ea2fe691540437014000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itstarted with the a sketch of the algorithm 2018-10-24 23:10:14 -0400840f9c886d30ce09df25856a9515b6083ea2fe69started with the a sketch of the algorithmeditExamples/research/LazyMaps/BOD/bod_joint.pyExamples/research/LazyMaps/BOD/bod_joint.pya8ea19f2a7aef9d11f1cde6bbea7540a392f9e391540477466000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on algorithm 2018-10-25 10:24:26 -0400a8ea19f2a7aef9d11f1cde6bbea7540a392f9e39working on algorithmeditExamples/research/LazyMaps/BOD/bod_joint.pyExamples/research/LazyMaps/BOD/DeepLazyMapConstructionBase.pyExamples/research/LazyMaps/BOD/bod_joint.pyTransportMaps/Maps/TransportMapBase.pyTransportMaps/Maps/SimpleTransportMaps.py9ed2788668768eab6bc2c8ec5813afde616640df1540517433000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itlazy map implementation for BOD 2018-10-25 21:30:33 -04009ed2788668768eab6bc2c8ec5813afde616640dflazy map implementation for BODeditTransportMaps/Maps/TransportMapBase.pyaddExamples/research/LazyMaps/BOD/DeepLazyMapConstructionBase.pyeditExamples/research/LazyMaps/BOD/bod_joint.pyeditTransportMaps/Maps/SimpleTransportMaps.pyTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapConstructionBase.pyExamples/research/LazyMaps/BOD/DeepLazyMapConstructionBase.pyExamples/research/LazyMaps/BOD/bod_joint.pyTransportMaps/Algorithms/__init__.pyTransportMaps/__init__.pyTransportMaps/Algorithms/DeepLazyMaps/__init__.py026211ec4fc55d95819b6606f9762d06d268326f1540519341000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itstarted algorithm for lazy map in Algorithms 2018-10-25 22:02:21 -0400026211ec4fc55d95819b6606f9762d06d268326fstarted algorithm for lazy map in AlgorithmseditExamples/research/LazyMaps/BOD/bod_joint.pyeditTransportMaps/Algorithms/__init__.pyaddTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapConstructionBase.pyeditTransportMaps/__init__.pyaddTransportMaps/Algorithms/DeepLazyMaps/__init__.pydeleteExamples/research/LazyMaps/BOD/DeepLazyMapConstructionBase.pyTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapConstructionBase.pyExamples/research/LazyMaps/BOD/bod_joint.pyTransportMaps/Distributions/FrozenDistributions.pyExamples/research/LazyMaps/banana/banana.py449b888314474016bd2603ee78cc9be02eb9a1951540524085000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on banana 2018-10-25 23:21:25 -0400449b888314474016bd2603ee78cc9be02eb9a195working on bananaeditTransportMaps/Distributions/FrozenDistributions.pyeditExamples/research/LazyMaps/BOD/bod_joint.pyeditTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapConstructionBase.pyaddExamples/research/LazyMaps/banana/banana.pyTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapConstructionBase.pyTransportMaps/Diagnostics/Plotting.pyExamples/research/LazyMaps/banana/banana.py3ce3e4e7bea01d4a33968bd1ee84561dd77bf29e1540567434000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on banana 2018-10-26 11:23:54 -04003ce3e4e7bea01d4a33968bd1ee84561dd77bf29eworking on bananaeditTransportMaps/Diagnostics/Plotting.pyeditExamples/research/LazyMaps/banana/banana.pyeditTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapConstructionBase.pyTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapConstructionBase.pyExamples/research/LazyMaps/BOD/bod_joint.pyExamples/research/LazyMaps/banana/banana.pyecba62b9181e405122302e9a7e4e170d4a3d3aa21540584288000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itsoft truncation, i.e. nearly linear map works better than hard truncation (which does not work at all but in few cases) 2018-10-26 16:04:48 -0400ecba62b9181e405122302e9a7e4e170d4a3d3aa2soft truncation, i.e. nearly linear map works better than hard truncation (which does not work at all but in few cases)editExamples/research/LazyMaps/BOD/bod_joint.pyeditExamples/research/LazyMaps/banana/banana.pyeditTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapConstructionBase.pyExamples/research/LazyMaps/BOD/bod_joint.py7925a3176695af5e9bcd24cf476bdb338a1eb2341542302148000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itplaying with orders 2018-11-15 12:15:48 -05007925a3176695af5e9bcd24cf476bdb338a1eb234playing with orderseditExamples/research/LazyMaps/BOD/bod_joint.pyTransportMaps/Distributions/Examples/Lorenz63/Lorenz63Distributions.pyExamples/research/Lorenz63/GenerateDistribution.pyExamples/research/Lorenz63/test_distribution.pyTransportMaps/DerivativesChecks.pyTransportMaps/Likelihoods/LikelihoodBase.py56aca2ba0d46f86372c56ca4d73c6abe1de6fa831542476632000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on the generation of the distribution 2018-11-17 12:43:52 -050056aca2ba0d46f86372c56ca4d73c6abe1de6fa83working on the generation of the distributionaddExamples/research/Lorenz63/GenerateDistribution.pyeditTransportMaps/DerivativesChecks.pyaddExamples/research/Lorenz63/test_distribution.pyeditTransportMaps/Likelihoods/LikelihoodBase.pyeditTransportMaps/Distributions/Examples/Lorenz63/Lorenz63Distributions.pyTransportMaps/Distributions/Examples/Lorenz63/Lorenz63Distributions.pyExamples/research/Lorenz63/GenerateDistribution.py7f71b11ba43d2c97c5ef210358a7aa919975c8bc1542605386000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itsetup for Lorenz63 done 2018-11-19 00:29:46 -05007f71b11ba43d2c97c5ef210358a7aa919975c8bcsetup for Lorenz63 doneeditExamples/research/Lorenz63/GenerateDistribution.pyeditTransportMaps/Distributions/Examples/Lorenz63/Lorenz63Distributions.pyExamples/research/Lorenz63/GenerateDistribution.pyscripts/tmap-sequential-tmTransportMaps/Likelihoods/LikelihoodBase.py627ba5e4520781c4fbd950ce8bbdfcc8168aff4d1542642420000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itsome fixes for sequential data assimilation 2018-11-19 10:47:00 -0500627ba5e4520781c4fbd950ce8bbdfcc8168aff4dsome fixes for sequential data assimilationeditExamples/research/Lorenz63/GenerateDistribution.pyeditTransportMaps/Likelihoods/LikelihoodBase.pyeditscripts/tmap-sequential-tmTransportMaps/Distributions/Examples/Lorenz63/Lorenz63Distributions.pyExamples/research/Lorenz63/GenerateDistribution.pyExamples/research/Lorenz63/postprocess-plotting.py1640e880d5cb880ce9c5b16f1060948bc8a6c4a81542666526000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on linear map approximation 2018-11-19 17:28:46 -05001640e880d5cb880ce9c5b16f1060948bc8a6c4a8working on linear map approximationeditTransportMaps/Distributions/Examples/Lorenz63/Lorenz63Distributions.pyeditExamples/research/Lorenz63/GenerateDistribution.pyaddExamples/research/Lorenz63/postprocess-plotting.pyExamples/research/Lorenz63/GenerateDistribution.pyExamples/research/Lorenz63/postprocess-plotting.py578cf0faf65edd8376812e9a2fc458f3ae8aca1c1542736081000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itfiguring out what's wrong... 2018-11-20 12:48:01 -0500578cf0faf65edd8376812e9a2fc458f3ae8aca1cfiguring out what's wrong...editExamples/research/Lorenz63/GenerateDistribution.pyeditExamples/research/Lorenz63/postprocess-plotting.pyTransportMaps/Distributions/DistributionBase.py45d6082666ffce0d1626a78e86ba6f4f606f154b1542736276000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itadded testing of gradients for distributions 2018-11-20 12:51:16 -050045d6082666ffce0d1626a78e86ba6f4f606f154badded testing of gradients for distributionseditTransportMaps/Distributions/DistributionBase.pyExamples/research/Lorenz63/GenerateDistribution.pyTransportMaps/Distributions/DistributionBase.py05b65f96f75be3833a24eb1836d3908779fbc3c41542737335000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itadded tests for gradients of distributions and tried on Lorenz63 2018-11-20 13:08:55 -050005b65f96f75be3833a24eb1836d3908779fbc3c4added tests for gradients of distributions and tried on Lorenz63editTransportMaps/Distributions/DistributionBase.pyeditExamples/research/Lorenz63/GenerateDistribution.pyTransportMaps/Distributions/Examples/Lorenz63/Lorenz63Distributions.pybb2cea5b1d7b4aa5e5ff7b324a3831e1b1ed083e1542743780000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on forward Euler map 2018-11-20 14:56:20 -0500bb2cea5b1d7b4aa5e5ff7b324a3831e1b1ed083eworking on forward Euler mapeditTransportMaps/Distributions/Examples/Lorenz63/Lorenz63Distributions.pyTransportMaps/Distributions/Examples/Lorenz63/Lorenz63Distributions.pyeacf676893dfa134edad2744f4179cc81596ed2d1542744332000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on Forward Euler 2018-11-20 15:05:32 -0500eacf676893dfa134edad2744f4179cc81596ed2dworking on Forward EulereditTransportMaps/Distributions/Examples/Lorenz63/Lorenz63Distributions.pyTransportMaps/Distributions/Examples/Lorenz63/Lorenz63Distributions.pyTransportMaps/Maps/__init__.pyExamples/research/Lorenz63/GenerateDistribution.pyExamples/research/Lorenz63/test_distribution.pyTransportMaps/Maps/DiscretizedODEsMaps.py99dc14b6166f7f8bbffbafb142a7b2b59d8fba701542753424000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itfixed Lorenz63 and added ODEs discretization maps to the framework 2018-11-20 17:37:04 -050099dc14b6166f7f8bbffbafb142a7b2b59d8fba70fixed Lorenz63 and added ODEs discretization maps to the frameworkeditTransportMaps/Maps/__init__.pyeditTransportMaps/Distributions/Examples/Lorenz63/Lorenz63Distributions.pyeditExamples/research/Lorenz63/test_distribution.pyaddTransportMaps/Maps/DiscretizedODEsMaps.pyeditExamples/research/Lorenz63/GenerateDistribution.pyTransportMaps/Distributions/Examples/Lorenz63/Lorenz63Distributions.pyTransportMaps/Distributions/Examples/__init__.pyTransportMaps/Distributions/Examples/Lorenz96/Lorenz96Distributions.pyTransportMaps/Maps/DiscretizedODEsMaps.pyTransportMaps/Distributions/Examples/Lorenz96/__init__.pyExamples/research/Lorenz63/postprocess-plotting.py4fdb9d15abf89edb75ae16c75d274ec87e91f66b1542776544000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itstarted implementation of Lorenz 96 2018-11-21 00:02:24 -05004fdb9d15abf89edb75ae16c75d274ec87e91f66bstarted implementation of Lorenz 96editTransportMaps/Distributions/Examples/Lorenz63/Lorenz63Distributions.pyaddTransportMaps/Distributions/Examples/Lorenz96/Lorenz96Distributions.pyeditTransportMaps/Distributions/Examples/__init__.pyeditExamples/research/Lorenz63/postprocess-plotting.pyeditTransportMaps/Maps/DiscretizedODEsMaps.pyaddTransportMaps/Distributions/Examples/Lorenz96/__init__.pyExamples/research/Lorenz96/test_map.pyTransportMaps/Distributions/Examples/Lorenz96/Lorenz96Distributions.pyf13cdfe8fcfa77d7bd7fd0555888b1827b0cc2741542777148000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on Lorenz96 2018-11-21 00:12:28 -0500f13cdfe8fcfa77d7bd7fd0555888b1827b0cc274working on Lorenz96editTransportMaps/Distributions/Examples/Lorenz96/Lorenz96Distributions.pyaddExamples/research/Lorenz96/test_map.pyTransportMaps/Distributions/Examples/Lorenz63/Lorenz63Distributions.pyExamples/research/Lorenz63/GenerateDistribution.pyTransportMaps/Maps/DiscretizedODEsMaps.pyTransportMaps/Maps/SimpleTransportMaps.py2e14d978e09b2d05a0f5209fa758c3de382aeb871542818812000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itadded the possibility of skipping prediction steps by composing Euler maps 2018-11-21 11:46:52 -05002e14d978e09b2d05a0f5209fa758c3de382aeb87added the possibility of skipping prediction steps by composing Euler mapseditTransportMaps/Maps/SimpleTransportMaps.pyeditExamples/research/Lorenz63/GenerateDistribution.pyeditTransportMaps/Distributions/Examples/Lorenz63/Lorenz63Distributions.pyeditTransportMaps/Maps/DiscretizedODEsMaps.pyExamples/research/Lorenz63/postprocess-plotting.pyb2758b2b56e8a0d929375a00f6ac20994270f76e1542824881000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itadded rmse output for smoothing 2018-11-21 13:28:01 -0500b2758b2b56e8a0d929375a00f6ac20994270f76eadded rmse output for smoothingeditExamples/research/Lorenz63/postprocess-plotting.pyTransportMaps/Distributions/Examples/Lorenz63/Lorenz63Distributions.pyExamples/research/Lorenz63/GenerateDistribution.pyTransportMaps/Distributions/Examples/Lorenz96/Lorenz96Distributions.pyExamples/research/Lorenz63/postprocess-plotting.pyTransportMaps/Distributions/Decomposable/SequentialInferenceDistributions.py9f3bc928c58922e94e1a85a3d90feb0961a7966f1542833672000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itlorenz 96 distribution ready 2018-11-21 15:54:32 -05009f3bc928c58922e94e1a85a3d90feb0961a7966florenz 96 distribution readyeditExamples/research/Lorenz63/GenerateDistribution.pyeditExamples/research/Lorenz63/postprocess-plotting.pyeditTransportMaps/Distributions/Examples/Lorenz63/Lorenz63Distributions.pyeditTransportMaps/Distributions/Decomposable/SequentialInferenceDistributions.pyeditTransportMaps/Distributions/Examples/Lorenz96/Lorenz96Distributions.pyExamples/research/Lorenz63/GenerateDistribution.pyExamples/research/Lorenz96/test_map.pyExamples/research/Lorenz96/GenerateDistribution.pyExamples/research/Lorenz63/postprocess-plotting.py8e30bbc8f355fb61240c05a6a19bba7458dd45181543028823000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itstarting to generate distribution for Lorenz96 2018-11-23 22:07:03 -05008e30bbc8f355fb61240c05a6a19bba7458dd4518starting to generate distribution for Lorenz96editExamples/research/Lorenz96/test_map.pyeditExamples/research/Lorenz63/GenerateDistribution.pyeditExamples/research/Lorenz63/postprocess-plotting.pyaddExamples/research/Lorenz96/GenerateDistribution.pyExamples/research/Lorenz96/GenerateDistribution.py0874e78d8c097dc7a1a2883cdfcbe91237b31bef1543029210000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itdynamics generated correctly 2018-11-23 22:13:30 -05000874e78d8c097dc7a1a2883cdfcbe91237b31befdynamics generated correctlyeditExamples/research/Lorenz96/GenerateDistribution.pyExamples/research/Lorenz96/GenerateSparseTransportMap.pyExamples/research/Lorenz96/GenerateDistribution.py82aab474a6d4c595c5e1b969405bb3fff002b3e61543121366000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on the generator of maps with prescribed sparsity for L96 2018-11-24 23:49:26 -050082aab474a6d4c595c5e1b969405bb3fff002b3e6working on the generator of maps with prescribed sparsity for L96addExamples/research/Lorenz96/GenerateSparseTransportMap.pyeditExamples/research/Lorenz96/GenerateDistribution.pyExamples/research/Lorenz96/GenerateSparseTransportMap.pydc05a923efe7a737a77389d37536429c489c03991543122342000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on the generator of maps with prescribed sparsity for L96 2018-11-25 00:05:42 -0500dc05a923efe7a737a77389d37536429c489c0399working on the generator of maps with prescribed sparsity for L96editExamples/research/Lorenz96/GenerateSparseTransportMap.pyscripts/tmap-sequential-tmTransportMaps/CLI/PostprocessBase.pyTransportMaps/Samplers/MarkovChainSamplers.pyExamples/research/Lorenz96/GenerateSparseTransportMap.pyExamples/research/Lorenz96/GenerateDistribution.py9ca1cafe94b399fa4582bdf52eca5e800fb3e2cf1543238253000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on loading maps for L96 2018-11-26 08:17:33 -05009ca1cafe94b399fa4582bdf52eca5e800fb3e2cfworking on loading maps for L96editscripts/tmap-sequential-tmeditExamples/research/Lorenz96/GenerateSparseTransportMap.pyeditTransportMaps/CLI/PostprocessBase.pyeditExamples/research/Lorenz96/GenerateDistribution.pyeditTransportMaps/Samplers/MarkovChainSamplers.pyscripts/tmap-sequential-tmExamples/research/Lorenz63/GenerateDistribution.pyTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyExamples/research/Lorenz63/postprocess-plotting.py8cb77668bb68e3f6d57dbbe34e6e7a91a3ce08fd1543701828000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on postprocessing 2018-12-01 17:03:48 -05008cb77668bb68e3f6d57dbbe34e6e7a91a3ce08fdworking on postprocessingeditscripts/tmap-sequential-tmeditExamples/research/Lorenz63/GenerateDistribution.pyeditExamples/research/Lorenz63/postprocess-plotting.pyeditTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyExamples/research/Lorenz63/run-plotting.shExamples/research/Lorenz63/GenerateDistribution.pyExamples/research/Lorenz63/run-postprocess.shExamples/research/Lorenz96/run-postprocess.shExamples/research/Lorenz63/run-trim-smooth.shExamples/research/Lorenz96/GenerateDistribution.pyExamples/research/Lorenz63/postprocess-plotting.pyscripts/tmap-sequential-tmExamples/research/Lorenz63/run-mcmc.shExamples/research/Lorenz96/GenerateSparseTransportMap.py38d6dc3844c3ec60ac846ce660cd0dfd66d694d71544118835000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on results for AGU 2018-12-06 12:53:55 -050038d6dc3844c3ec60ac846ce660cd0dfd66d694d7working on results for AGUaddExamples/research/Lorenz63/run-plotting.sheditscripts/tmap-sequential-tmeditExamples/research/Lorenz63/GenerateDistribution.pyeditExamples/research/Lorenz63/postprocess-plotting.pyaddExamples/research/Lorenz63/run-postprocess.shaddExamples/research/Lorenz63/run-trim-smooth.shaddExamples/research/Lorenz96/run-postprocess.sheditExamples/research/Lorenz96/GenerateDistribution.pyaddExamples/research/Lorenz63/run-mcmc.sheditExamples/research/Lorenz96/GenerateSparseTransportMap.pyExamples/research/Lorenz96/GenerateDistribution.pyf488c6be07c559d1fd70111332e7a3853b0ce2c51544154406000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on results for AGU 2018-12-06 22:46:46 -0500f488c6be07c559d1fd70111332e7a3853b0ce2c5working on results for AGUeditExamples/research/Lorenz96/GenerateDistribution.pyExamples/research/Lorenz63/run-plotting.shExamples/research/Lorenz63/GenerateDistribution.pyExamples/research/Lorenz96/run-plotting.shExamples/research/Lorenz96/postprocess-plotting.pyExamples/research/Lorenz96/run-postprocess.shExamples/research/Lorenz63/postprocess-plotting.pyscripts/tmap-sequential-tmExamples/research/Lorenz96/GenerateSparseTransportMap.py7bf1ba5e776c1011e89626d6bff3ddf7ce00fb871544284920000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itadded missing files l96 2018-12-08 11:02:00 -05007bf1ba5e776c1011e89626d6bff3ddf7ce00fb87added missing files l96addExamples/research/Lorenz96/run-plotting.sheditscripts/tmap-sequential-tmeditExamples/research/Lorenz96/GenerateSparseTransportMap.pyeditExamples/research/Lorenz63/GenerateDistribution.pyeditExamples/research/Lorenz63/postprocess-plotting.pyaddExamples/research/Lorenz96/postprocess-plotting.pyeditExamples/research/Lorenz96/run-postprocess.sheditExamples/research/Lorenz63/run-plotting.shDocs/source/example-gumbel-1d.ipynb94d01521c71cc3fc9229ebae4dd1779c817e4e7f1544312572000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itfixed documentation 2018-12-08 18:42:52 -050094d01521c71cc3fc9229ebae4dd1779c817e4e7ffixed documentationeditDocs/source/example-gumbel-1d.ipynbDocs/source/example-gumbel-1d.ipynbe44ce0b96e1e4c8c67a71bb8cd35eea0f35b900b1544313866000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itgumbel example re-run for documentation 2018-12-08 19:04:26 -0500e44ce0b96e1e4c8c67a71bb8cd35eea0f35b900bgumbel example re-run for documentationeditDocs/source/example-gumbel-1d.ipynbExamples/research/Lorenz63/run-plotting.shExamples/research/Lorenz96/run-plotting.shExamples/research/Lorenz96/run-postprocess.shExamples/research/Lorenz96/GenerateDistribution.pyExamples/research/Lorenz63/postprocess-plotting.pyExamples/research/Lorenz63/run-mcmc.shExamples/research/Lorenz96/GenerateSparseTransportMap.py0fa191ea9f7d9384a13b596fd0668d7f64c4532c1544654748000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on time plotting of l63 2018-12-12 17:45:48 -05000fa191ea9f7d9384a13b596fd0668d7f64c4532cworking on time plotting of l63editExamples/research/Lorenz63/postprocess-plotting.pyeditExamples/research/Lorenz63/run-plotting.sheditExamples/research/Lorenz63/run-mcmc.sheditExamples/research/Lorenz96/GenerateDistribution.pyeditExamples/research/Lorenz96/run-postprocess.sheditExamples/research/Lorenz96/GenerateSparseTransportMap.pyeditExamples/research/Lorenz96/run-plotting.shTransportMaps/LaplaceApproximationRoutines.pye12a835d62bbc8868bc93bbc89dd5e9b89cad0b91544816488000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itfixed low-rank approximation for outer grad (lis) to not compute multiple likelihoods 2018-12-14 14:41:28 -0500e12a835d62bbc8868bc93bbc89dd5e9b89cad0b9fixed low-rank approximation for outer grad (lis) to not compute multiple likelihoodseditTransportMaps/LaplaceApproximationRoutines.pyTransportMaps/LaplaceApproximationRoutines.py9694c0f1a21fccdd6ac04112bd9b16c194ce29e41544817046000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itfixed low-rank approximation for outer grad (lis) to not compute multiple likelihoods 2018-12-14 14:50:46 -05009694c0f1a21fccdd6ac04112bd9b16c194ce29e4fixed low-rank approximation for outer grad (lis) to not compute multiple likelihoodseditTransportMaps/LaplaceApproximationRoutines.pyExamples/research/Lorenz63/run-plotting.shExamples/research/Lorenz63/reduced_basis_extraction.pyExamples/research/Lorenz63/postprocess-plotting.py4285a794af670e4e6f91d1e2220c0fe4276fe0b41544821114000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on reduced basis extraction 2018-12-14 15:58:34 -05004285a794af670e4e6f91d1e2220c0fe4276fe0b4working on reduced basis extractioneditExamples/research/Lorenz63/run-plotting.sheditExamples/research/Lorenz63/postprocess-plotting.pyaddExamples/research/Lorenz63/reduced_basis_extraction.pyExamples/research/Lorenz63/reduced_basis_extraction.pya4ca7fd1b92e7306d68b8d3b32ce477217c826061544821187000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on reduced basis extraction 2018-12-14 15:59:47 -0500a4ca7fd1b92e7306d68b8d3b32ce477217c82606working on reduced basis extractioneditExamples/research/Lorenz63/reduced_basis_extraction.pyExamples/research/Lorenz63/run-plotting.shExamples/research/Lorenz63/reduced_basis_extraction.pyExamples/research/Lorenz63/run-postprocess.shTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyExamples/research/Lorenz63/postprocess-plotting.pyc445e41d7f1fe3bb9c5fd3a0fa9aa4f5b07dda781545085128000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on low-rank filter 2018-12-17 17:18:48 -0500c445e41d7f1fe3bb9c5fd3a0fa9aa4f5b07dda78working on low-rank filtereditExamples/research/Lorenz63/reduced_basis_extraction.pyeditExamples/research/Lorenz63/run-plotting.sheditExamples/research/Lorenz63/run-postprocess.sheditExamples/research/Lorenz63/postprocess-plotting.pyeditTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyTransportMaps/CLI/AvailableOptions.pyExamples/research/Lorenz63/GenerateDistribution.pyTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyExamples/research/Lorenz63/reduced_basis_extraction.pyTransportMaps/Maps/__init__.pyscripts/tmap-sequential-tmTransportMaps/Maps/MapFactoryBase.pyTransportMaps/Maps/TransportMapBase.pyExamples/research/Lorenz63/GenerateLowRankMap.pyTransportMaps/Maps/SimpleTransportMaps.pye9a97b692723774f29f53dfcb9eda28f52c317701545169489000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on low-rank for filtering 2018-12-18 16:44:49 -0500e9a97b692723774f29f53dfcb9eda28f52c31770working on low-rank for filteringeditTransportMaps/CLI/AvailableOptions.pyeditExamples/research/Lorenz63/GenerateDistribution.pyeditTransportMaps/Maps/TransportMapBase.pyaddExamples/research/Lorenz63/GenerateLowRankMap.pyeditTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyeditExamples/research/Lorenz63/reduced_basis_extraction.pyaddTransportMaps/Maps/MapFactoryBase.pyeditTransportMaps/Maps/SimpleTransportMaps.pyeditTransportMaps/Maps/__init__.pyeditscripts/tmap-sequential-tmTransportMaps/Maps/__init__.pyscripts/tmap-sequential-tmTransportMaps/Maps/MapFactoryBase.pyTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyTransportMaps/Maps/Decomposable/__init__.pyc1351e1bff245dfced16875fade9983018039f171545173635000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on generation of maps for low-rank approximations 2018-12-18 17:53:55 -0500c1351e1bff245dfced16875fade9983018039f17working on generation of maps for low-rank approximationseditTransportMaps/Maps/__init__.pyeditTransportMaps/Maps/Decomposable/__init__.pyeditscripts/tmap-sequential-tmeditTransportMaps/Maps/MapFactoryBase.pyeditTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyTransportMaps/Maps/Decomposable/SequentialInferenceMapFactoryBase.pyExamples/research/Lorenz63/GenerateMapFactory.py4c4a59ba7cbce9cec1bfb59ff0114548f6f7b32a1545173662000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on generation of maps for low-rank approximations 2018-12-18 17:54:22 -05004c4a59ba7cbce9cec1bfb59ff0114548f6f7b32aworking on generation of maps for low-rank approximationsaddExamples/research/Lorenz63/GenerateMapFactory.pyaddTransportMaps/Maps/Decomposable/SequentialInferenceMapFactoryBase.pyExamples/research/Lorenz63/reduced_basis_extraction.pyTransportMaps/Maps/FullTransportMaps.pyTransportMaps/Maps/LinearMaps.pyTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyTransportMaps/Maps/SimpleTransportMaps.pye36b9c8e8a1bcec2a06ec482511543d179bffedd1545248980000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itexperimenting with low-rank 2018-12-19 14:49:40 -0500e36b9c8e8a1bcec2a06ec482511543d179bffeddexperimenting with low-rankeditTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyeditTransportMaps/Maps/FullTransportMaps.pyeditTransportMaps/Maps/LinearMaps.pyeditExamples/research/Lorenz63/reduced_basis_extraction.pyeditTransportMaps/Maps/SimpleTransportMaps.pyExamples/research/Lorenz96/GenerateMapFactory.pyExamples/research/Lorenz96/auxmod/__init__.pyTransportMaps/Maps/FullTransportMaps.pyTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyExamples/research/Lorenz96/reduced_basis_extraction.pyExamples/research/Lorenz96/auxmod/MapFactory.pyExamples/research/Lorenz63/reduced_basis_extraction.pyTransportMaps/Maps/TransportMapBase.pyTransportMaps/Maps/Decomposable/SequentialInferenceMapFactoryBase.pyTransportMaps/Maps/MapBase.py3af144d03397e549bc83253c6c118b7142525b071545448925000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on low-rank l96 2018-12-21 22:22:05 -05003af144d03397e549bc83253c6c118b7142525b07working on low-rank l96editExamples/research/Lorenz63/reduced_basis_extraction.pyaddExamples/research/Lorenz96/reduced_basis_extraction.pyeditTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyaddExamples/research/Lorenz96/auxmod/__init__.pyeditTransportMaps/Maps/FullTransportMaps.pyaddExamples/research/Lorenz96/auxmod/MapFactory.pyeditTransportMaps/Maps/MapBase.pyeditTransportMaps/Maps/TransportMapBase.pyeditTransportMaps/Maps/Decomposable/SequentialInferenceMapFactoryBase.pyaddExamples/research/Lorenz96/GenerateMapFactory.pyExamples/research/Lorenz96/auxmod/MapFactory.pyExamples/research/Lorenz96/GenerateMapFactory.pyExamples/research/Lorenz96/postprocess-plotting.pyExamples/research/Lorenz96/add-python-pathTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.py3237103afb37e8408b344df889696fe453dbaed31545930318000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on low-rank l96 2018-12-27 12:05:18 -05003237103afb37e8408b344df889696fe453dbaed3working on low-rank l96addExamples/research/Lorenz96/add-python-patheditExamples/research/Lorenz96/auxmod/MapFactory.pyeditExamples/research/Lorenz96/postprocess-plotting.pyeditExamples/research/Lorenz96/GenerateMapFactory.pyeditTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyTransportMaps/Distributions/Examples/Lorenz96/fast_eval.pyxExamples/research/Lorenz96/postprocess-plotting.pyExamples/research/Lorenz96/run-postprocess.shTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyExamples/research/Lorenz96/GenerateDistribution.pyTransportMaps/Distributions/Examples/Lorenz96/__init__.pyTransportMaps/CLI/PostprocessBase.pysetup.pyTransportMaps/Distributions/Examples/Lorenz96/Lorenz96Distributions.py827547c835b9a2af8ba56a92c2d25c440229c8681546466671000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on L96 M2 2019-01-02 17:04:31 -0500827547c835b9a2af8ba56a92c2d25c440229c868working on L96 M2editExamples/research/Lorenz96/GenerateDistribution.pyeditTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyeditTransportMaps/CLI/PostprocessBase.pyeditsetup.pyeditExamples/research/Lorenz96/run-postprocess.shaddTransportMaps/Distributions/Examples/Lorenz96/fast_eval.pyxeditExamples/research/Lorenz96/postprocess-plotting.pyeditTransportMaps/Distributions/Examples/Lorenz96/__init__.pyeditTransportMaps/Distributions/Examples/Lorenz96/Lorenz96Distributions.pyTransportMaps/Distributions/Examples/Lorenz96/fast_eval.pyxf634f42813d6af3d19b45a007b55f144109bbaf71546467108000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on L96 M2 2019-01-02 17:11:48 -0500f634f42813d6af3d19b45a007b55f144109bbaf7working on L96 M2editTransportMaps/Distributions/Examples/Lorenz96/fast_eval.pyxTransportMaps/Distributions/Examples/Lorenz96/fast_eval.pyx2aeb893d3ec3a557bd1272201c6012e973af080b1546467910000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on L96 M2 2019-01-02 17:25:10 -05002aeb893d3ec3a557bd1272201c6012e973af080bworking on L96 M2editTransportMaps/Distributions/Examples/Lorenz96/fast_eval.pyxTransportMaps/Distributions/Examples/Lorenz96/fast_eval.pyxExamples/research/Lorenz96/GenerateDistribution.pyTransportMaps/Distributions/Examples/Lorenz96/Lorenz96Distributions.pyd6640eea5ff9f9902d6b91c89ff610b5e9947fe41546535470000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on gradient of L96 model II 2019-01-03 12:11:10 -0500d6640eea5ff9f9902d6b91c89ff610b5e9947fe4working on gradient of L96 model IIeditTransportMaps/Distributions/Examples/Lorenz96/Lorenz96Distributions.pyeditExamples/research/Lorenz96/GenerateDistribution.pyeditTransportMaps/Distributions/Examples/Lorenz96/fast_eval.pyxTransportMaps/Distributions/Examples/Lorenz96/fast_eval.pyxExamples/research/Lorenz96/GenerateDistribution.pyTransportMaps/Distributions/Examples/Lorenz96/Lorenz96Distributions.pya708f71633b931aafb8209bfc80df62cc079c3ee1546547573000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itcython implementation of gradient works 2019-01-03 15:32:53 -0500a708f71633b931aafb8209bfc80df62cc079c3eecython implementation of gradient workseditTransportMaps/Distributions/Examples/Lorenz96/fast_eval.pyxeditTransportMaps/Distributions/Examples/Lorenz96/Lorenz96Distributions.pyeditExamples/research/Lorenz96/GenerateDistribution.pyTransportMaps/Distributions/Examples/Lorenz96/fast_eval.pyxTransportMaps/Distributions/Examples/Lorenz96/Lorenz96Distributions.py113e4ddc30a5d406445043ebff76b365381ae7e21546549011000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itaction of hessian works for L96 model 2 2019-01-03 15:56:51 -0500113e4ddc30a5d406445043ebff76b365381ae7e2action of hessian works for L96 model 2editTransportMaps/Distributions/Examples/Lorenz96/Lorenz96Distributions.pyeditTransportMaps/Distributions/Examples/Lorenz96/fast_eval.pyxTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyscripts/tmap-sequential-tm89ea43e49d37c70dd6510d9f35799f6b1ef10c7c1546571199000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on preconditioning 2019-01-03 22:06:39 -050089ea43e49d37c70dd6510d9f35799f6b1ef10c7cworking on preconditioningeditTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyeditscripts/tmap-sequential-tmTransportMaps/Distributions/Examples/Lorenz96/fast_eval.pyxTransportMaps/Distributions/DistributionBase.pyExamples/research/Lorenz96/GenerateDistribution.pyTransportMaps/Distributions/FrozenDistributions.pyTransportMaps/Distributions/Examples/Lorenz96/Lorenz96Distributions.pyTransportMaps/Maps/TransportMapBase.pyTransportMaps/Maps/LinearMaps.pyTransportMaps/Maps/DiscretizedODEsMaps.pyTransportMaps/Maps/MapBase.pyTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyTransportMaps/Distributions/Decomposable/SequentialInferenceDistributions.pyscripts/tmap-sequential-tmTransportMaps/DerivativesChecks.py883e281182c7a8e56b4fea9fed02a68367bd83701546634079000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on l96 m2 2019-01-04 15:34:39 -0500883e281182c7a8e56b4fea9fed02a68367bd8370working on l96 m2editTransportMaps/Distributions/DistributionBase.pyeditTransportMaps/Maps/TransportMapBase.pyeditTransportMaps/Distributions/Examples/Lorenz96/fast_eval.pyxeditscripts/tmap-sequential-tmeditTransportMaps/Maps/MapBase.pyeditTransportMaps/Distributions/Examples/Lorenz96/Lorenz96Distributions.pyeditTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyeditTransportMaps/Distributions/Decomposable/SequentialInferenceDistributions.pyeditTransportMaps/Maps/LinearMaps.pyeditTransportMaps/Maps/DiscretizedODEsMaps.pyeditExamples/research/Lorenz96/GenerateDistribution.pyeditTransportMaps/Distributions/FrozenDistributions.pyeditTransportMaps/DerivativesChecks.pyTransportMaps/Distributions/Decomposable/SequentialInferenceDistributions.pyffbca27fd53effbbf35962ad4ac339a0ecae9d051546638545000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on l96 m2 2019-01-04 16:49:05 -0500ffbca27fd53effbbf35962ad4ac339a0ecae9d05working on l96 m2editTransportMaps/Distributions/Decomposable/SequentialInferenceDistributions.pyExamples/research/Lorenz96/GenerateDistribution.pyTransportMaps/Distributions/Decomposable/SequentialInferenceDistributions.pyb5c12d3e897634dc5c7984a06af867c0ddc8df1c1546657663000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itrunning l96 m2 2019-01-04 22:07:43 -0500b5c12d3e897634dc5c7984a06af867c0ddc8df1crunning l96 m2editTransportMaps/Distributions/Decomposable/SequentialInferenceDistributions.pyeditExamples/research/Lorenz96/GenerateDistribution.pyTransportMaps/Maps/FullTransportMaps.pyTransportMaps/Maps/LinearMaps.pyaabd5690bd63f51ac43164cdb517ded3aa8d891f1546659463000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itpreparing linear maps for low-rank model 2019-01-04 22:37:43 -0500aabd5690bd63f51ac43164cdb517ded3aa8d891fpreparing linear maps for low-rank modeleditTransportMaps/Maps/FullTransportMaps.pyeditTransportMaps/Maps/LinearMaps.pyTransportMaps/Distributions/Examples/Lorenz96/Lorenz96Distributions.pyTransportMaps/Maps/LinearMaps.pyExamples/research/Lorenz96/GenerateDistribution.pyTransportMaps/Distributions/Decomposable/SequentialInferenceDistributions.py16b7d81e453ed196fe5dae4fa9503adbf1b885bc1546818558000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itre-factoring some nomenclature for hidden Markov chains 2019-01-06 18:49:18 -050016b7d81e453ed196fe5dae4fa9503adbf1b885bcre-factoring some nomenclature for hidden Markov chainseditTransportMaps/Maps/LinearMaps.pyeditExamples/research/Lorenz96/GenerateDistribution.pyeditTransportMaps/Distributions/Decomposable/SequentialInferenceDistributions.pyeditTransportMaps/Distributions/Examples/Lorenz96/Lorenz96Distributions.pyTransportMaps/Distributions/Decomposable/SequentialInferenceDistributions.py0be77e38dfaeccee6cf2609afdef48e990a94cef1546819271000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itre-factoring some nomenclature for hidden Markov chains 2019-01-06 19:01:11 -05000be77e38dfaeccee6cf2609afdef48e990a94cefre-factoring some nomenclature for hidden Markov chainseditTransportMaps/Distributions/Decomposable/SequentialInferenceDistributions.pyTransportMaps/Distributions/Examples/Lorenz96/Lorenz96Distributions.pyTransportMaps/Maps/TransportMapBase.pyExamples/research/Lorenz96/GenerateDistribution.pyTransportMaps/Maps/MapBase.pyTransportMaps/Distributions/Decomposable/SequentialInferenceDistributions.py8ac09743761ec7a3fcbe37043b3f23f4b8a0512f1546889345000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itmodal l96 model 2 done 2019-01-07 14:29:05 -05008ac09743761ec7a3fcbe37043b3f23f4b8a0512fmodal l96 model 2 doneeditTransportMaps/Maps/MapBase.pyeditExamples/research/Lorenz96/GenerateDistribution.pyeditTransportMaps/Maps/TransportMapBase.pyeditTransportMaps/Distributions/Examples/Lorenz96/Lorenz96Distributions.pyeditTransportMaps/Distributions/Decomposable/SequentialInferenceDistributions.pyscripts/tmap-sequential-tmTransportMaps/Algorithms/SequentialInference/SequentialInferenceBase.pyExamples/research/Lorenz96/postprocess-plotting.pyTransportMaps/Distributions/Decomposable/SequentialInferenceDistributions.pyea2470822007a0cc7c6f0dda6749d743ba569ccb1546892506000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itfixed tmap-seq-tm 2019-01-07 15:21:46 -0500ea2470822007a0cc7c6f0dda6749d743ba569ccbfixed tmap-seq-tmeditscripts/tmap-sequential-tmeditTransportMaps/Distributions/Decomposable/SequentialInferenceDistributions.pyeditTransportMaps/Algorithms/SequentialInference/SequentialInferenceBase.pyeditExamples/research/Lorenz96/postprocess-plotting.pyTransportMaps/Distributions/Examples/Lorenz96/Lorenz96Distributions.pyExamples/research/Lorenz96/run-plotting.shExamples/research/Lorenz96/postprocess-plotting.pyExamples/research/Lorenz96/run-postprocess.shTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyExamples/research/Lorenz96/GenerateDistribution.pyad1e0fb5822c44bb3948c2e4b2a236c629c6a3fd1546900235000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on filtering preconditioning 2019-01-07 17:30:35 -0500ad1e0fb5822c44bb3948c2e4b2a236c629c6a3fdworking on filtering preconditioningeditExamples/research/Lorenz96/GenerateDistribution.pyeditTransportMaps/Distributions/Examples/Lorenz96/Lorenz96Distributions.pyeditExamples/research/Lorenz96/run-postprocess.sheditTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyeditExamples/research/Lorenz96/run-plotting.sheditExamples/research/Lorenz96/postprocess-plotting.pyTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyscripts/tmap-sequential-tmExamples/research/Lorenz96/postprocess-plotting.pyf385f25323fb3a60d19c0b2bc5da79c27ea908091546989361000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itpreconditioning through filter almost works 2019-01-08 18:16:01 -0500f385f25323fb3a60d19c0b2bc5da79c27ea90809preconditioning through filter almost workseditTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyeditExamples/research/Lorenz96/postprocess-plotting.pyeditscripts/tmap-sequential-tmExamples/research/Lorenz96/GenerateMapFactory.pyExamples/research/Lorenz96/run-plotting.shExamples/research/Lorenz96/GenerateBandedMapFactory.pyTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyExamples/research/Lorenz96/GenerateDistribution.pyExamples/research/Lorenz96/auxmod/MapFactory.pysetup.pyscripts/tmap-sequential-tmTransportMaps/Maps/MapFactoryBase.pyTransportMaps/Maps/Decomposable/SequentialInferenceMapFactoryBase.pyTransportMaps/Maps/MapBase.pyd1378f34b8b7d6cec4234727ebfd801314e874071547070000000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on both l96 and l63 2019-01-09 16:40:00 -0500d1378f34b8b7d6cec4234727ebfd801314e87407working on both l96 and l63editExamples/research/Lorenz96/auxmod/MapFactory.pyeditTransportMaps/Maps/MapFactoryBase.pyeditTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyeditsetup.pyeditExamples/research/Lorenz96/GenerateMapFactory.pyeditscripts/tmap-sequential-tmeditExamples/research/Lorenz96/GenerateDistribution.pyeditExamples/research/Lorenz96/run-plotting.shaddExamples/research/Lorenz96/GenerateBandedMapFactory.pyeditTransportMaps/Maps/Decomposable/SequentialInferenceMapFactoryBase.pyeditTransportMaps/Maps/MapBase.pyTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyTransportMaps/Algorithms/Adaptivity/RegressionAdaptivity.py2bc38ff9cd16b3e3e4a82388e75ac7e15be8a5f61547091599000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itfilter preconditioning works!! 2019-01-09 22:39:59 -05002bc38ff9cd16b3e3e4a82388e75ac7e15be8a5f6filter preconditioning works!!editTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyeditTransportMaps/Algorithms/Adaptivity/RegressionAdaptivity.pyExamples/research/Lorenz63/run-plotting.shExamples/research/Lorenz96/run-plotting.shExamples/research/Lorenz96/run-postprocess.shExamples/research/Lorenz63/run-postprocess.shTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyExamples/research/Lorenz63/postprocess-plotting.pyscripts/tmap-sequential-tm04e1138eeb912780b65edabd4e41589f3f314ce91547149279000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itprepared filtering preconditioning for l96 2019-01-10 14:41:19 -050004e1138eeb912780b65edabd4e41589f3f314ce9prepared filtering preconditioning for l96editExamples/research/Lorenz63/postprocess-plotting.pyeditTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyeditExamples/research/Lorenz96/run-postprocess.sheditscripts/tmap-sequential-tmeditExamples/research/Lorenz96/run-plotting.sheditExamples/research/Lorenz63/run-postprocess.sheditExamples/research/Lorenz63/run-plotting.shscripts/tmap-sequential-tmExamples/research/Lorenz96/run-plotting.shExamples/research/Lorenz96/GenerateBandedMapFactory.pyTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.py9b22d289211c6d52639cd016ee2210ad50ced0a61547153971000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itpreconditioning through filtering works for l96 2019-01-10 15:59:31 -05009b22d289211c6d52639cd016ee2210ad50ced0a6preconditioning through filtering works for l96editExamples/research/Lorenz96/run-plotting.sheditExamples/research/Lorenz96/GenerateBandedMapFactory.pyeditTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyeditscripts/tmap-sequential-tmTransportMaps/Misc.pyTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.py205b0805bdac03be4a9f34dce6f25282adb3daad1547159084000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itmpi_map now updates automatically the counters of the methods called on an object 2019-01-10 17:24:44 -0500205b0805bdac03be4a9f34dce6f25282adb3daadmpi_map now updates automatically the counters of the methods called on an objecteditTransportMaps/Misc.pyeditTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyExamples/research/Lorenz96/run-plotting.shExamples/research/Lorenz96/run-postprocess.shTransportMaps/Distributions/Decomposable/SequentialInferenceDistributions.pyTransportMaps/Maps/Decomposable/SequentialInferenceMaps.pyab5a9c46ee5517902fb84675316f6961412416791547217836000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itl96 with filter preconditioning works. NEXT: remove 1st step of smoother (first lag-1 smoothing) and substitute with the regular step using the 0-th filtering (0-th step inference problem) 2019-01-11 09:43:56 -0500ab5a9c46ee5517902fb84675316f696141241679l96 with filter preconditioning works. NEXT: remove 1st step of smoother (first lag-1 smoothing) and substitute with the regular step using the 0-th filtering (0-th step inference problem)editTransportMaps/Distributions/Decomposable/SequentialInferenceDistributions.pyeditExamples/research/Lorenz96/run-plotting.sheditTransportMaps/Maps/Decomposable/SequentialInferenceMaps.pyeditExamples/research/Lorenz96/run-postprocess.shscripts/tmap-sequential-tmExamples/research/Lorenz96/run-plotting.shTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyTransportMaps/Distributions/Decomposable/SequentialInferenceDistributions.py203eb3c222932a830ff82f9fe457df1ab86187211547220545000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itremoved skip-first and made 0th step to be included in the final map. So the first map in the composition does not involve a transition 2019-01-11 10:29:05 -0500203eb3c222932a830ff82f9fe457df1ab8618721removed skip-first and made 0th step to be included in the final map. So the first map in the composition does not involve a transitioneditExamples/research/Lorenz96/run-plotting.sheditscripts/tmap-sequential-tmeditTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyeditTransportMaps/Distributions/Decomposable/SequentialInferenceDistributions.pyExamples/research/Lorenz96/GenerateMapFactory.pyTransportMaps/Algorithms/SequentialInference/SequentialInferenceBase.pyscripts/tmap-sequential-tmTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyExamples/research/Lorenz96/GenerateLowRankMapFactory.py39d31f6a508680c7d7d0a0ae06fd07254c7f1ecb1547221844000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on combination of filt preconditioner and low-rank preconditioner 2019-01-11 10:50:44 -050039d31f6a508680c7d7d0a0ae06fd07254c7f1ecbworking on combination of filt preconditioner and low-rank preconditionereditTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pydeleteExamples/research/Lorenz96/GenerateMapFactory.pyaddExamples/research/Lorenz96/GenerateLowRankMapFactory.pyeditTransportMaps/Algorithms/SequentialInference/SequentialInferenceBase.pyeditscripts/tmap-sequential-tmExamples/research/Lorenz96/auxmod/MapFactory.pyTransportMaps/Algorithms/Adaptivity/KullbackLeiblerAdaptivity.pyscripts/tmap-sequential-tmTransportMaps/Diagnostics/Validators.pyTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pydcafdbb51eb61b8a49c839995765bc14e401a1251547233723000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itlow-rank preconditioning works with filter preconditioning 2019-01-11 14:08:43 -0500dcafdbb51eb61b8a49c839995765bc14e401a125low-rank preconditioning works with filter preconditioningeditTransportMaps/Diagnostics/Validators.pyeditExamples/research/Lorenz96/auxmod/MapFactory.pyeditscripts/tmap-sequential-tmeditTransportMaps/Algorithms/Adaptivity/KullbackLeiblerAdaptivity.pyeditTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyTransportMaps/Algorithms/Adaptivity/KullbackLeiblerAdaptivity.pyExamples/research/Lorenz96/run-plotting.shExamples/research/Lorenz96/postprocess-plotting.pyExamples/research/Lorenz96/run-postprocess.shTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyExamples/research/Lorenz96/GenerateDistribution.pyExamples/research/Lorenz96/GenerateLowRankMapFactory.pyscripts/tmap-sequential-tm66d27e70e4cbc31db69175494e8cce449095c3ad1547544573000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on lr l96 2019-01-15 04:29:33 -050066d27e70e4cbc31db69175494e8cce449095c3adworking on lr l96editExamples/research/Lorenz96/run-plotting.sheditExamples/research/Lorenz96/GenerateDistribution.pyeditExamples/research/Lorenz96/GenerateLowRankMapFactory.pyeditTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyeditscripts/tmap-sequential-tmeditExamples/research/Lorenz96/postprocess-plotting.pyeditExamples/research/Lorenz96/run-postprocess.sheditTransportMaps/Algorithms/Adaptivity/KullbackLeiblerAdaptivity.pyExamples/research/Lorenz96/GenerateDistribution.py586826c71752a72c471fb602e8d911d66d0f4b9f1547574160000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on l96 2019-01-15 12:42:40 -0500586826c71752a72c471fb602e8d911d66d0f4b9fworking on l96editExamples/research/Lorenz96/GenerateDistribution.pyExamples/research/Lorenz96/auxmod/MapFactory.pyrequirements.txtTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyExamples/research/Lorenz96/GenerateDistribution.pyf8c1a6505c6ad02e927f783b08068303b831feea1547574183000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on l96 lr 2019-01-15 18:43:03 +0100f8c1a6505c6ad02e927f783b08068303b831feeaworking on l96 lreditExamples/research/Lorenz96/GenerateDistribution.pyeditrequirements.txteditExamples/research/Lorenz96/auxmod/MapFactory.pyeditTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyExamples/research/Lorenz96/auxmod/MapFactory.pyExamples/research/Lorenz96/GenerateBandedMapFactory.pyTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyExamples/research/Lorenz96/GenerateDistribution.pye4fbdd0e016136c21d08eb91d1df25f483bae06c1547632684000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itgoing.. 2019-01-16 10:58:04 +0100e4fbdd0e016136c21d08eb91d1df25f483bae06cgoing..editTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyeditExamples/research/Lorenz96/auxmod/MapFactory.pyeditExamples/research/Lorenz96/GenerateBandedMapFactory.pyeditExamples/research/Lorenz96/GenerateDistribution.pyExamples/research/Lorenz96/GenerateBandedMapFactory.pye3477ce38756c53358c04ff34c0940394a8d989b1549288972000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on banded maps 2019-02-04 15:02:52 +0100e3477ce38756c53358c04ff34c0940394a8d989bworking on banded mapseditExamples/research/Lorenz96/GenerateBandedMapFactory.pyTransportMaps/tests/test_transportmaps.pyTransportMaps/tests/test_transportmap_distributions.pyTransportMaps/tests/test_distributions.pyTransportMaps/Distributions/DistributionBase.pyTransportMaps/DerivativesChecks.pyTransportMaps/Maps/MapBase.pye84dde42935a86644384305e39b47b270bd8e9741549292322000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itfixed unit tests for test_derivatives functions 2019-02-04 15:58:42 +0100e84dde42935a86644384305e39b47b270bd8e974fixed unit tests for test_derivatives functionseditTransportMaps/Distributions/DistributionBase.pyeditTransportMaps/tests/test_distributions.pyeditTransportMaps/DerivativesChecks.pyeditTransportMaps/tests/test_transportmaps.pyeditTransportMaps/tests/test_transportmap_distributions.pyeditTransportMaps/Maps/MapBase.pyTransportMaps/Functionals/AlgebraicLinearSpanApproximations.pyrequirements.txtTransportMaps/Functionals/LinearSpanApproximationBase.pyTransportMaps/Maps/TriangularTransportMaps.pysetup.pyTransportMaps/Functionals/ParametricFunctionApproximationBase.pyTransportMaps/Functionals/MonotonicFunctionApproximations.py6aa42dd549ca521115159b5a9c465a055dd1183f1549929981000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itnow LinearSpanApproximation uses a semilattice for multiindex and coefficients storage 2019-02-11 19:06:21 -05006aa42dd549ca521115159b5a9c465a055dd1183fnow LinearSpanApproximation uses a semilattice for multiindex and coefficients storageeditTransportMaps/Maps/TriangularTransportMaps.pyeditrequirements.txteditTransportMaps/Functionals/AlgebraicLinearSpanApproximations.pyeditsetup.pyeditTransportMaps/Functionals/ParametricFunctionApproximationBase.pyeditTransportMaps/Functionals/MonotonicFunctionApproximations.pyeditTransportMaps/Functionals/LinearSpanApproximationBase.pyTransportMaps/tests/test_transportmaps.py36c952ca1a3e9b6685470d9bb65c4299eda469091549937487000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itpassing tests 2019-02-11 21:11:27 -050036c952ca1a3e9b6685470d9bb65c4299eda46909passing testseditTransportMaps/tests/test_transportmaps.pyTransportMaps/Defaults.pyTransportMaps/Functionals/LinearSpanApproximationBase.pyc665c50d2aa6d16431fa92a7eb3893a05e370af21550000616000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itsemilattice constructors exposed in default transport map constructors 2019-02-12 14:43:36 -0500c665c50d2aa6d16431fa92a7eb3893a05e370af2semilattice constructors exposed in default transport map constructorseditTransportMaps/Defaults.pyeditTransportMaps/Functionals/LinearSpanApproximationBase.pyExamples/research/Lorenz96/run-postprocess.shTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyExamples/research/Lorenz96/run-plotting.sh2db3256fef9d12236b246415ef57e28952c4cded1550000712000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itexperimenting low-rank subspace ideas 2019-02-12 14:45:12 -05002db3256fef9d12236b246415ef57e28952c4cdedexperimenting low-rank subspace ideaseditTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyeditExamples/research/Lorenz96/run-postprocess.sheditExamples/research/Lorenz96/run-plotting.shTransportMaps/Functionals/MonotonicFunctionApproximations.py7e3322f2df14973d305892af2a5ad1c69969cc3c1550086979000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itfixed init coeffs bug 2019-02-13 14:42:59 -05007e3322f2df14973d305892af2a5ad1c69969cc3cfixed init coeffs bugeditTransportMaps/Functionals/MonotonicFunctionApproximations.pyTransportMaps/tests/test_kl_divergence.pyTransportMaps/Functionals/LinearSpanApproximationBase.pyd32cdecf495542ea855365d644ba63e2344e23d41550095097000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itfixed semilattice data structure for serialization 2019-02-13 16:58:17 -0500d32cdecf495542ea855365d644ba63e2344e23d4fixed semilattice data structure for serializationeditTransportMaps/Functionals/LinearSpanApproximationBase.pyeditTransportMaps/tests/test_kl_divergence.pyTransportMaps/tests/test_xml.pyTransportMaps/Functionals/LinearSpanApproximationBase.pyd247c5f6d8b153000e665373e828104e6a9aebba1550095155000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itfixed bugs in tests 2019-02-13 16:59:15 -0500d247c5f6d8b153000e665373e828104e6a9aebbafixed bugs in testseditTransportMaps/tests/test_xml.pyeditTransportMaps/Functionals/LinearSpanApproximationBase.pyTransportMaps/tests/test_transportmaps.pyTransportMaps/tests/test_kl_divergence.pyTransportMaps/tests/test_L2_minimization.pyTransportMaps/tests/test_distributions.pyTransportMaps/tests/test_kl_minimization.pyTransportMaps/tests/test_transportmap_distributions_sampling.pyTransportMaps/tests/test_L2_misfit.pyTransportMaps/tests/test_transportmap_distributions.pyTransportMaps/tests/test_functions.pyd9b88992392d9f56ade5c35bc7fa369af4fdaff91550116594000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itreshaped tests 2019-02-13 22:56:34 -0500d9b88992392d9f56ade5c35bc7fa369af4fdaff9reshaped testseditTransportMaps/tests/test_distributions.pyeditTransportMaps/tests/test_kl_minimization.pyeditTransportMaps/tests/test_transportmap_distributions.pyeditTransportMaps/tests/test_L2_misfit.pyeditTransportMaps/tests/test_transportmaps.pyeditTransportMaps/tests/test_L2_minimization.pyeditTransportMaps/tests/test_functions.pyeditTransportMaps/tests/test_transportmap_distributions_sampling.pyeditTransportMaps/tests/test_kl_divergence.pyTransportMaps/tests/test_transportmaps.pyjenkins/test-source.shjenkins/test-testpypi.shTransportMaps/tests/test_all.pyjenkins/test-pypi.shTransportMaps/tests/test_xml.py.oldTransportMaps/tests/test_xml.pyd1e635ee35d6284953d15a0e3fbac7cc0c0ea9e21550200066000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itpasses all tests 2019-02-14 22:07:46 -0500d1e635ee35d6284953d15a0e3fbac7cc0c0ea9e2passes all testsaddTransportMaps/tests/test_xml.py.oldeditjenkins/test-source.sheditTransportMaps/tests/test_all.pyeditjenkins/test-pypi.sheditTransportMaps/tests/test_transportmaps.pydeleteTransportMaps/tests/test_xml.pyeditjenkins/test-testpypi.shTransportMaps/Algorithms/Adaptivity/KullbackLeiblerAdaptivity.py617f7a612c5836f94e2cf77906030f629603d08c1550437489000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on fv linear candidate map 2019-02-17 16:04:49 -0500617f7a612c5836f94e2cf77906030f629603d08cworking on fv linear candidate mapeditTransportMaps/Algorithms/Adaptivity/KullbackLeiblerAdaptivity.pyTransportMaps/Algorithms/Adaptivity/KullbackLeiblerAdaptivity.pyTransportMaps/Defaults.pyTransportMaps/Functionals/ParametricFunctionApproximationBase.pyTransportMaps/Misc.py6ae947e764418cd56b0969d171ebd8e1966c08941550513336000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itsemilattices integrated into adaptivity. To be tested! The spirit is there though. 2019-02-18 13:08:56 -05006ae947e764418cd56b0969d171ebd8e1966c0894semilattices integrated into adaptivity. To be tested! The spirit is there though.editTransportMaps/Defaults.pyeditTransportMaps/Algorithms/Adaptivity/KullbackLeiblerAdaptivity.pyeditTransportMaps/Functionals/ParametricFunctionApproximationBase.pyeditTransportMaps/Misc.pyTransportMaps/Algorithms/Adaptivity/KullbackLeiblerAdaptivity.pyTransportMaps/Functionals/AlgebraicLinearSpanApproximations.pyExamples/research/MonotoneTransport-paper/Banana/BananaPlots.pyTransportMaps/Functionals/LinearSpanApproximationBase.py0672a5a9d0d5a30867e4eb6eef8937178dbd224b1550545236000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itsemilattices integrated into adaptivity algorithm. fixes #92 2019-02-18 22:00:36 -05000672a5a9d0d5a30867e4eb6eef8937178dbd224bsemilattices integrated into adaptivity algorithm. fixes #92editExamples/research/MonotoneTransport-paper/Banana/BananaPlots.pyeditTransportMaps/Algorithms/Adaptivity/KullbackLeiblerAdaptivity.pyeditTransportMaps/Functionals/AlgebraicLinearSpanApproximations.pyeditTransportMaps/Functionals/LinearSpanApproximationBase.pyTransportMaps/Functionals/LinearSpanApproximationBase.py8c49d0fc332a313ab85a26c6188f4ba59cf7c9421550581292000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itchanged format of semilattices for linear span 2019-02-19 08:01:32 -05008c49d0fc332a313ab85a26c6188f4ba59cf7c942changed format of semilattices for linear spaneditTransportMaps/Functionals/LinearSpanApproximationBase.pyTransportMaps/Functionals/LinearSpanApproximationBase.pyc7d884dc286463b52b1e9351c2693f9de867dd5c1550581505000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itchanged format of semilattices for linear span 2019-02-19 08:05:05 -0500c7d884dc286463b52b1e9351c2693f9de867dd5cchanged format of semilattices for linear spaneditTransportMaps/Functionals/LinearSpanApproximationBase.pyTransportMaps/Maps/TriangularTransportMapBase.pyTransportMaps/tests/test_L2_minimization.pyTransportMaps/Maps/TriangularTransportMaps.py462c99d76ee5390a62a4c82f00e9028d8d4875361550598530000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itfixed callback parameter minimize kl. 2019-02-19 12:48:50 -0500462c99d76ee5390a62a4c82f00e9028d8d487536fixed callback parameter minimize kl.editTransportMaps/Maps/TriangularTransportMaps.pyeditTransportMaps/Maps/TriangularTransportMapBase.pyeditTransportMaps/tests/test_L2_minimization.pysetup.pyTransportMaps/Functionals/LinearSpanApproximationBase.py959dfdd8df1f5077d9a65bf01db8db731927c8351550603991000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itchanged active_set to SortedSet to preserve iteration order after serialization (for parallel computing purposes) 2019-02-19 14:19:51 -0500959dfdd8df1f5077d9a65bf01db8db731927c835changed active_set to SortedSet to preserve iteration order after serialization (for parallel computing purposes)editsetup.pyeditTransportMaps/Functionals/LinearSpanApproximationBase.pyTransportMaps/Functionals/LinearSpanApproximationBase.pyff3152dfc11eb30fa24d93fb8e8c570ad39414521550604940000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itadded LinearSpanVertex to the exposed classes 2019-02-19 14:35:40 -0500ff3152dfc11eb30fa24d93fb8e8c570ad3941452added LinearSpanVertex to the exposed classeseditTransportMaps/Functionals/LinearSpanApproximationBase.pyTransportMaps/tests/test_laplace.pyTransportMaps/Maps/LinearMaps.pyTransportMaps/Maps/MapBase.pyTransportMaps/Likelihoods/LikelihoodBase.py16d47bf8c7a0c8cdc5323b065fe51af81bd181b91550610372000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itfixed bug in LinearMap (defined twice...) 2019-02-19 16:06:12 -050016d47bf8c7a0c8cdc5323b065fe51af81bd181b9fixed bug in LinearMap (defined twice...)editTransportMaps/Maps/LinearMaps.pyeditTransportMaps/Maps/MapBase.pyeditTransportMaps/tests/test_laplace.pyeditTransportMaps/Likelihoods/LikelihoodBase.pyTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapConstructionBase.pyExamples/research/LazyMaps/euler-bernoulli/test_distribution.pyExamples/research/LazyMaps/banana/banana.py93c774fffa15613d1ad3691d1640bf6cf97dea431550610477000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on constructor 2019-02-19 16:07:57 -050093c774fffa15613d1ad3691d1640bf6cf97dea43working on constructoreditTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapConstructionBase.pyeditExamples/research/LazyMaps/euler-bernoulli/test_distribution.pyeditExamples/research/LazyMaps/banana/banana.pyExamples/research/LazyMaps/poisson/runner.py19224511d3087c59cf2f27608d2240534f5994941550610565000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itstarted on poisson 2019-02-19 16:09:25 -050019224511d3087c59cf2f27608d2240534f599494started on poissonaddExamples/research/LazyMaps/poisson/runner.pyExamples/research/LazyMaps/poisson/runner.py16f9f55ef3d8b00777e8313ad1d52b6112bb40dd1550617905000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on runner for poisson 2019-02-19 18:11:45 -050016f9f55ef3d8b00777e8313ad1d52b6112bb40ddworking on runner for poissoneditExamples/research/LazyMaps/poisson/runner.pyTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapConstructionBase.pyTransportMaps/Distributions/Decomposable/LinearGaussianSequentialInferenceDistributions.pyExamples/research/LazyMaps/poisson/runner.pyscripts/tmap-tm94fc84533c29dae504389770cdc57188fdbbb2491550690868000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itembedding the deep lazy map construction into the builder cycle 2019-02-20 14:27:48 -050094fc84533c29dae504389770cdc57188fdbbb249embedding the deep lazy map construction into the builder cycleeditscripts/tmap-tmeditTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapConstructionBase.pyeditTransportMaps/Distributions/Decomposable/LinearGaussianSequentialInferenceDistributions.pyeditExamples/research/LazyMaps/poisson/runner.pyscripts/tmap-tmTransportMaps/CLI/ScriptBase.pyTransportMaps/tests/test_scripts.pyTransportMaps/CLI/PostprocessBase.pyTransportMaps/CLI/__init__.pyTransportMaps/Misc.pyTransportMaps/CLI/ConstructionBase.py6a3276a99b6bd8c4453903bd9300373c7c4510d91550700799000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.ittransformed tmap-tm in the logic of CLI. to be tested by doing... 2019-02-20 17:13:19 -05006a3276a99b6bd8c4453903bd9300373c7c4510d9transformed tmap-tm in the logic of CLI. to be tested by doing...editTransportMaps/CLI/PostprocessBase.pyeditTransportMaps/CLI/ScriptBase.pyeditTransportMaps/CLI/__init__.pyeditscripts/tmap-tmeditTransportMaps/tests/test_scripts.pyaddTransportMaps/CLI/ConstructionBase.pyeditTransportMaps/Misc.pyTransportMaps/Algorithms/Adaptivity/KullbackLeiblerAdaptivity.pyTransportMaps/Algorithms/Adaptivity/RegressionAdaptivity.pyTransportMaps/Builders/BuilderBase.pyTransportMaps/__init__.pyTransportMaps/Builders/__init__.pyTransportMaps/Algorithms/Adaptivity/__init__.pyTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapConstructionBase.pyTransportMaps/Algorithms/Adaptivity/AdaptivityBase.py33b916f80a74a8015a150912bcc2947807ec7b5b1550717900000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itrestructuring all the building architecture 2019-02-20 21:58:20 -050033b916f80a74a8015a150912bcc2947807ec7b5brestructuring all the building architectureeditTransportMaps/Algorithms/Adaptivity/KullbackLeiblerAdaptivity.pyeditTransportMaps/Algorithms/Adaptivity/RegressionAdaptivity.pyeditTransportMaps/__init__.pyaddTransportMaps/Builders/__init__.pyeditTransportMaps/Algorithms/Adaptivity/__init__.pydeleteTransportMaps/Algorithms/Adaptivity/AdaptivityBase.pyeditTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapConstructionBase.pyaddTransportMaps/Builders/BuilderBase.pyTransportMaps/Algorithms/Adaptivity/KullbackLeiblerAdaptivity.pyTransportMaps/CLI/ConstructionBase.pyTransportMaps/Builders/BuilderBase.py8bf3697f91fbb1f5fe437e490b5ea17ddaacd0051550724725000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itrestructuring of building architecture done. todo on sequential algorithm as well. 2019-02-20 23:52:05 -05008bf3697f91fbb1f5fe437e490b5ea17ddaacd005restructuring of building architecture done. todo on sequential algorithm as well.editTransportMaps/Builders/BuilderBase.pyeditTransportMaps/Algorithms/Adaptivity/KullbackLeiblerAdaptivity.pyeditTransportMaps/CLI/ConstructionBase.pyTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapConstructionBase.pyTransportMaps/Algorithms/Adaptivity/KullbackLeiblerAdaptivity.pyTransportMaps/Algorithms/Adaptivity/RegressionAdaptivity.pyTransportMaps/Algorithms/SequentialInference/LinearSequentialInference.pyTransportMaps/Builders/BuilderBase.pyTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyebdf4f8a8d0ad1f4b0bf5c8d4d08a9b50e5ee98a1550762953000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on reshaping of builders 2019-02-21 10:29:13 -0500ebdf4f8a8d0ad1f4b0bf5c8d4d08a9b50e5ee98aworking on reshaping of builderseditTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapConstructionBase.pyeditTransportMaps/Algorithms/Adaptivity/RegressionAdaptivity.pyeditTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyeditTransportMaps/Builders/BuilderBase.pyeditTransportMaps/Algorithms/Adaptivity/KullbackLeiblerAdaptivity.pyeditTransportMaps/Algorithms/SequentialInference/LinearSequentialInference.pyTransportMaps/Maps/TransportMapBase.pyTransportMaps/DerivativesChecks.py7057ef5c8bdbecb32c29e57474bd5fa9f4d3921e1550765853000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itsome fixes after big merge. Going to branch off this in order to debug and work on Lazy maps at the same time 2019-02-21 11:17:33 -05007057ef5c8bdbecb32c29e57474bd5fa9f4d3921esome fixes after big merge. Going to branch off this in order to debug and work on Lazy maps at the same timeeditTransportMaps/DerivativesChecks.pyeditTransportMaps/Maps/TransportMapBase.pyTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapConstructionBase.pyrequirements.txtExamples/research/LazyMaps/poisson/runner.pyb55177ae0d18d933c8901e5bec445fbda3a6170f1550788480000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on the runner for lazy maps 2019-02-21 17:34:40 -0500b55177ae0d18d933c8901e5bec445fbda3a6170fworking on the runner for lazy mapseditTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapConstructionBase.pyeditrequirements.txteditExamples/research/LazyMaps/poisson/runner.pyTransportMaps/tests/test_kl_divergence.pyTransportMaps/tests/TestFunctions.pyrequirements.txtTransportMaps/tests/test_distributions.pyTransportMaps/Distributions/FrozenDistributions.pyTransportMaps/Algorithms/SparsityIdentification/SparsityIdentificationNonGaussian.pyTransportMaps/CLI/ConstructionBase.py6df63a49ef1663e2e4aa204603345f2644c4a8b41550807493000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itfixing here and there 2019-02-21 22:51:33 -05006df63a49ef1663e2e4aa204603345f2644c4a8b4fixing here and thereeditTransportMaps/tests/test_distributions.pyeditTransportMaps/Distributions/FrozenDistributions.pyeditrequirements.txteditTransportMaps/Algorithms/SparsityIdentification/SparsityIdentificationNonGaussian.pyeditTransportMaps/tests/test_kl_divergence.pyeditTransportMaps/tests/TestFunctions.pyeditTransportMaps/CLI/ConstructionBase.pyTransportMaps/Algorithms/Adaptivity/KullbackLeiblerAdaptivity.pyTransportMaps/Builders/BuilderBase.pyTransportMaps/CLI/DeepLazyMapConstructionScriptBase.pyTransportMaps/CLI/ScriptBase.pyTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapConstructionBase.pyTransportMaps/CLI/__init__.pyTransportMaps/Misc.pyTransportMaps/CLI/ConstructionBase.pyTransportMaps/CLI/ConstructionScriptBase.pya36aefd19e2b238f3150a2da494378cbe052bc511550807570000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on the lazy map script 2019-02-21 22:52:50 -0500a36aefd19e2b238f3150a2da494378cbe052bc51working on the lazy map scripteditTransportMaps/Algorithms/Adaptivity/KullbackLeiblerAdaptivity.pyeditTransportMaps/CLI/ScriptBase.pyaddTransportMaps/CLI/ConstructionScriptBase.pyaddTransportMaps/CLI/DeepLazyMapConstructionScriptBase.pyeditTransportMaps/Misc.pyeditTransportMaps/CLI/__init__.pyeditTransportMaps/Builders/BuilderBase.pydeleteTransportMaps/CLI/ConstructionBase.pyeditTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapConstructionBase.pyTransportMaps/CLI/DeepLazyMapConstructionScriptBase.pyTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapConstructionBase.pyTransportMaps/CLI/ConstructionScriptBase.py3d0a2b7c99a08dd79ad602a8d906b56448e662e11550853866000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on scripts for lazy maps 2019-02-22 11:44:26 -05003d0a2b7c99a08dd79ad602a8d906b56448e662e1working on scripts for lazy mapseditTransportMaps/CLI/ConstructionScriptBase.pyeditTransportMaps/CLI/DeepLazyMapConstructionScriptBase.pyeditTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapConstructionBase.pyTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapConstructionBase.pyacfe58e671737ca919d2d7c363e17e3b5c2d22cd1550854149000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on scripts for lazy maps 2019-02-22 11:49:09 -0500acfe58e671737ca919d2d7c363e17e3b5c2d22cdworking on scripts for lazy mapseditTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapConstructionBase.pyTransportMaps/CLI/ConstructionScriptBase.pyd5639a6b2c9f3f51f48fad40ca1cb1329d839dd71550854327000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itfixing new interface 2019-02-22 11:52:07 -0500d5639a6b2c9f3f51f48fad40ca1cb1329d839dd7fixing new interfaceeditTransportMaps/CLI/ConstructionScriptBase.pyTransportMaps/Algorithms/Adaptivity/KullbackLeiblerAdaptivity.pyTransportMaps/CLI/DeepLazyMapsConstructionScriptBase.pyTransportMaps/CLI/SequentialPostprocessBase.pyTransportMaps/Algorithms/DeepLazyMaps/__init__.pyTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapConstructionBase.pyTransportMaps/CLI/ScriptBase.pyTransportMaps/CLI/PostprocessBase.pysetup.pyTransportMaps/CLI/__init__.pyTransportMaps/CLI/AdaptivityPostprocessBase.pyTransportMaps/CLI/DeepLazyMapConstructionScriptBase.pyTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapsConstructionBase.pyTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapFactories.pyTransportMaps/CLI/ConstructionScriptBase.py1006158753fe3cb3243141c52f0735bb7bc07af41550864308000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.ittesting tmap-deep-lazy-tm 2019-02-22 14:38:28 -05001006158753fe3cb3243141c52f0735bb7bc07af4testing tmap-deep-lazy-tmaddTransportMaps/CLI/DeepLazyMapsConstructionScriptBase.pydeleteTransportMaps/CLI/DeepLazyMapConstructionScriptBase.pyeditTransportMaps/CLI/SequentialPostprocessBase.pyeditTransportMaps/CLI/__init__.pydeleteTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapConstructionBase.pyeditTransportMaps/CLI/ScriptBase.pyaddTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapFactories.pyaddTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapsConstructionBase.pyeditTransportMaps/Algorithms/Adaptivity/KullbackLeiblerAdaptivity.pyeditTransportMaps/Algorithms/DeepLazyMaps/__init__.pyeditTransportMaps/CLI/PostprocessBase.pyeditsetup.pyeditTransportMaps/CLI/ConstructionScriptBase.pyeditTransportMaps/CLI/AdaptivityPostprocessBase.pyscripts/tmap-deep-lazy-tm9c5fedacd36b0f44011395fb3533335dabf487ba1550864322000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.ittesting tmap-deep-lazy-tm 2019-02-22 14:38:42 -05009c5fedacd36b0f44011395fb3533335dabf487batesting tmap-deep-lazy-tmaddscripts/tmap-deep-lazy-tmTransportMaps/CLI/ConstructionScriptBase.pyTransportMaps/CLI/DeepLazyMapsConstructionScriptBase.pyf8abf4503c9cc85505a3ac1f0f12a0534e9f154a1550865414000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.ittesting... 2019-02-22 14:56:54 -0500f8abf4503c9cc85505a3ac1f0f12a0534e9f154atesting...editTransportMaps/CLI/ConstructionScriptBase.pyeditTransportMaps/CLI/DeepLazyMapsConstructionScriptBase.pyTransportMaps/Builders/BuilderBase.pyTransportMaps/CLI/DeepLazyMapsConstructionScriptBase.pyTransportMaps/CLI/SequentialPostprocessBase.pyTransportMaps/CLI/ScriptBase.pyTransportMaps/CLI/PostprocessBase.pyTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapsConstructionBase.pyTransportMaps/Misc.pyTransportMaps/CLI/AdaptivityPostprocessBase.pyTransportMaps/CLI/ConstructionScriptBase.py5c3480e6ec32f3f29394fd5cc8d743a5e97385941550869809000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itscript runs 2019-02-22 16:10:09 -05005c3480e6ec32f3f29394fd5cc8d743a5e9738594script runseditTransportMaps/CLI/AdaptivityPostprocessBase.pyeditTransportMaps/Builders/BuilderBase.pyeditTransportMaps/CLI/PostprocessBase.pyeditTransportMaps/CLI/SequentialPostprocessBase.pyeditTransportMaps/CLI/ScriptBase.pyeditTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapsConstructionBase.pyeditTransportMaps/CLI/ConstructionScriptBase.pyeditTransportMaps/CLI/DeepLazyMapsConstructionScriptBase.pyeditTransportMaps/Misc.pyTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapsConstructionBase.pyTransportMaps/Builders/BuilderBase.pyTransportMaps/Diagnostics/Validators.pyTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapFactories.pyTransportMaps/CLI/ConstructionScriptBase.pye5e1e025aa1563bffe4d06351cf0749ba562e5ad1550873101000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on poisson with lazy maps 2019-02-22 17:05:01 -0500e5e1e025aa1563bffe4d06351cf0749ba562e5adworking on poisson with lazy mapseditTransportMaps/CLI/ConstructionScriptBase.pyeditTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapFactories.pyeditTransportMaps/Builders/BuilderBase.pyeditTransportMaps/Diagnostics/Validators.pyeditTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapsConstructionBase.pyTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapsConstructionBase.py3d69541394826181b1d0e79ad1e2c1aab04374051550873570000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on poisson with lazy maps 2019-02-22 17:12:50 -05003d69541394826181b1d0e79ad1e2c1aab0437405working on poisson with lazy mapseditTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapsConstructionBase.pyExamples/research/PoissonProblem/visualize_distribution.pyExamples/research/LazyMaps/poisson/postprocess-plotting.pyExamples/research/PoissonProblem/whiten.pyExamples/research/LazyMaps/poisson/visualize_distribution.pyTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapsConstructionBase.pyExamples/research/PoissonProblem/GaussianFieldDataGeneration.pyb797e207a6f4d411b15882e54f935764900d39851551136240000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on poisson problem 2019-02-25 18:10:40 -0500b797e207a6f4d411b15882e54f935764900d3985working on poisson problemeditExamples/research/PoissonProblem/whiten.pyaddExamples/research/LazyMaps/poisson/visualize_distribution.pyeditTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapsConstructionBase.pyeditExamples/research/PoissonProblem/GaussianFieldDataGeneration.pyaddExamples/research/PoissonProblem/visualize_distribution.pyaddExamples/research/LazyMaps/poisson/postprocess-plotting.pyDocs/source/Figures/working/taxonomy/taxonomy.texTransportMaps/Maps/MapBase.py640c2ff86057174676f7af4c2010ff0381f8905d1551804182000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on taxonomy structure 2019-03-05 11:43:02 -0500640c2ff86057174676f7af4c2010ff0381f8905dworking on taxonomy structureeditTransportMaps/Maps/MapBase.pyaddDocs/source/Figures/working/taxonomy/taxonomy.texDocs/source/Figures/working/taxonomy/tikz-uml.sty84179c87eb9d4af7258cc1b50b7a6fafb9b9e3aa1551804247000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itadded missing file 2019-03-05 11:44:07 -050084179c87eb9d4af7258cc1b50b7a6fafb9b9e3aaadded missing fileaddDocs/source/Figures/working/taxonomy/tikz-uml.styExamples/research/LazyMaps/poisson/visualize_distribution.pyExamples/research/LazyMaps/BOD/whiten.pyExamples/research/PoissonProblem/GaussianFieldDataGeneration.pyExamples/research/LazyMaps/BOD/GenerateBODJoint.pyExamples/research/LazyMaps/poisson/postprocess-plotting.pyTransportMaps/CLI/PostprocessBase.pyTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapsConstructionBase.py3fb123f4058002b09bfb5fe1d961758d8c4e9e701551804368000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itfixes for cse presentation on Lazy maps 2019-03-05 11:46:08 -05003fb123f4058002b09bfb5fe1d961758d8c4e9e70fixes for cse presentation on Lazy mapseditExamples/research/LazyMaps/poisson/postprocess-plotting.pyeditTransportMaps/CLI/PostprocessBase.pyaddExamples/research/LazyMaps/BOD/GenerateBODJoint.pyeditTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapsConstructionBase.pyeditExamples/research/LazyMaps/poisson/visualize_distribution.pyeditExamples/research/PoissonProblem/GaussianFieldDataGeneration.pyaddExamples/research/LazyMaps/BOD/whiten.pyDocs/source/Figures/working/taxonomy/taxonomy.tex5dab5d2c383c9b2e932bd941eabf1e225910f9fb1551924894000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.it... 2019-03-06 21:14:54 -05005dab5d2c383c9b2e932bd941eabf1e225910f9fb...editDocs/source/Figures/working/taxonomy/taxonomy.texDocs/source/Figures/working/taxonomy/taxonomy.texbc88027afef6f2ac399a4f147e6bf75e4b0ac82a1551934102000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itgoing on with taxonomy 2019-03-06 23:48:22 -0500bc88027afef6f2ac399a4f147e6bf75e4b0ac82agoing on with taxonomyeditDocs/source/Figures/working/taxonomy/taxonomy.texDocs/source/Figures/working/taxonomy/taxonomy.texd190c8d3ec1d540102d2573e9818d5fa87e37c861551976381000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on distributions 2019-03-07 11:33:01 -0500d190c8d3ec1d540102d2573e9818d5fa87e37c86working on distributionseditDocs/source/Figures/working/taxonomy/taxonomy.texDocs/source/Figures/working/taxonomy/taxonomy.tex7b599f3ecf55620535d1f55aef058c3cc063a58f1551992251000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.it... 2019-03-07 15:57:31 -05007b599f3ecf55620535d1f55aef058c3cc063a58f...editDocs/source/Figures/working/taxonomy/taxonomy.texDocs/source/Figures/working/taxonomy/taxonomy.tex3becbb4c18fcb05174d1e2f1ef81dd15a80cb94a1552064404000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on taxonomy for distributions 2019-03-08 12:00:04 -05003becbb4c18fcb05174d1e2f1ef81dd15a80cb94aworking on taxonomy for distributionseditDocs/source/Figures/working/taxonomy/taxonomy.texDocs/source/Figures/working/taxonomy/taxonomy.tex169a08da78eac012d4c381934ad25f4f15b5be331552085032000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on taxonomy 2019-03-08 17:43:52 -0500169a08da78eac012d4c381934ad25f4f15b5be33working on taxonomyeditDocs/source/Figures/working/taxonomy/taxonomy.texDocs/source/Figures/working/taxonomy/taxonomy.texTransportMaps/Distributions/ConditionalDistributions.py4b3d451f9b4bbdeaad3e3b7bbcf16d3658eae4611552167928000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itadvancing with distributions 2019-03-09 16:45:28 -05004b3d451f9b4bbdeaad3e3b7bbcf16d3658eae461advancing with distributionseditDocs/source/Figures/working/taxonomy/taxonomy.texeditTransportMaps/Distributions/ConditionalDistributions.pyDocs/source/Figures/working/taxonomy/taxonomy.texc7f3bd51de86ac19605bd598828e04a55a03c19e1552241276000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on decomposable distributions... 2019-03-10 14:07:56 -0400c7f3bd51de86ac19605bd598828e04a55a03c19eworking on decomposable distributions...editDocs/source/Figures/working/taxonomy/taxonomy.texDocs/source/Figures/working/taxonomy/taxonomy.texb4947907349f1588447a06ef7b7607987a8b7ea41552247767000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on decomposable taxonomy 2019-03-10 15:56:07 -0400b4947907349f1588447a06ef7b7607987a8b7ea4working on decomposable taxonomyeditDocs/source/Figures/working/taxonomy/taxonomy.texDocs/source/Figures/working/taxonomy/taxonomy.tex56d09f5bbac6a8119e28119d7279fe66e724bec31552341023000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on Maps 2019-03-11 17:50:23 -040056d09f5bbac6a8119e28119d7279fe66e724bec3working on MapseditDocs/source/Figures/working/taxonomy/taxonomy.texDocs/source/Figures/working/taxonomy/taxonomy.texac30442abc4991b29aae1369ece00d66a12095e01552352085000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.it... 2019-03-11 20:54:45 -0400ac30442abc4991b29aae1369ece00d66a12095e0...editDocs/source/Figures/working/taxonomy/taxonomy.texDocs/source/Figures/working/taxonomy/taxonomy.tex0d7959e5654ed7c2dc676b724d63ed695b85ddbd1552403263000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.it... 2019-03-12 11:07:43 -04000d7959e5654ed7c2dc676b724d63ed695b85ddbd...editDocs/source/Figures/working/taxonomy/taxonomy.texDocs/source/Figures/working/taxonomy/taxonomy.texff93b690debd0861315bdefc3e4f8883927acf2d1552416196000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itadded Functionals module 2019-03-12 14:43:16 -0400ff93b690debd0861315bdefc3e4f8883927acf2dadded Functionals moduleeditDocs/source/Figures/working/taxonomy/taxonomy.texDocs/source/Figures/working/taxonomy/taxonomy.tex1a7d2ce74418ce7b0e26aa61b955269fe67798ef1552427568000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itdone with Functionals 2019-03-12 17:52:48 -04001a7d2ce74418ce7b0e26aa61b955269fe67798efdone with FunctionalseditDocs/source/Figures/working/taxonomy/taxonomy.texDocs/source/Figures/working/taxonomy/taxonomy.tex0ef2e3741c6b91ff2d124c2767bd611ebf7381f61552441699000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itadde Likelihoods 2019-03-12 21:48:19 -04000ef2e3741c6b91ff2d124c2767bd611ebf7381f6adde LikelihoodseditDocs/source/Figures/working/taxonomy/taxonomy.texDocs/source/Figures/working/taxonomy/taxonomy.texdb42c08a8252faa04c9abfa4f36dcfe9329a08421552441818000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itfixed edge 2019-03-12 21:50:18 -0400db42c08a8252faa04c9abfa4f36dcfe9329a0842fixed edgeeditDocs/source/Figures/working/taxonomy/taxonomy.texTransportMaps/Maps/InverseMapBase.pyTransportMaps/__init__.pyTransportMaps/Maps/ListCompositeMapBase.pyDocs/source/Figures/working/taxonomy/taxonomy.texTransportMaps/Maps/__init__.pyTransportMaps/Maps/MapBaseTmp.pyTransportMaps/Maps/SlicedMapBase.pyTransportMaps/Maps/TransportMapBase.pyTransportMaps/Maps/MapBase.pyTransportMaps/Maps/ListStackedMapBase.py74d98067c869edf2e0dc0b1cdce9100c9e972ff71552490751000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itStarted with the refactoring of the code... Things breaks from here... 2019-03-13 11:25:51 -040074d98067c869edf2e0dc0b1cdce9100c9e972ff7Started with the refactoring of the code... Things breaks from here...editTransportMaps/Maps/MapBase.pyaddTransportMaps/Maps/InverseMapBase.pyaddTransportMaps/Maps/MapBaseTmp.pyeditDocs/source/Figures/working/taxonomy/taxonomy.texaddTransportMaps/Maps/ListStackedMapBase.pyeditTransportMaps/Maps/TransportMapBase.pyeditTransportMaps/Maps/__init__.pyaddTransportMaps/Maps/SlicedMapBase.pyaddTransportMaps/Maps/ListCompositeMapBase.pyeditTransportMaps/__init__.pyDocs/source/Figures/working/taxonomy/taxonomy.texTransportMaps/Maps/__init__.pyTransportMaps/Maps/MapBaseTmp.pya2ead9f618cc335ca43729df4746ea245079098b1552492097000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on Maps module refactoring 2019-03-13 11:48:17 -0400a2ead9f618cc335ca43729df4746ea245079098bworking on Maps module refactoringeditTransportMaps/Maps/MapBaseTmp.pyeditDocs/source/Figures/working/taxonomy/taxonomy.texeditTransportMaps/Maps/__init__.pyTransportMaps/Maps/TransportMapBaseTmp.pyTransportMaps/Maps/TriangularComponentwiseMapBase.pyTransportMaps/Maps/__init__.pyTransportMaps/Maps/ParametricMapBase.pyDocs/source/Figures/working/taxonomy/taxonomy.texTransportMaps/Maps/ParametricComponentwiseMapBase.pyTransportMaps/Maps/ConstantMapBase.pyTransportMaps/Maps/TransportMapBase.pyTransportMaps/Maps/ComponentwiseMapBase.pydc81bd1d9ced8589f03e3553d4e30f1e12d7a9fd1552505306000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.it... 2019-03-13 15:28:26 -0400dc81bd1d9ced8589f03e3553d4e30f1e12d7a9fd...addTransportMaps/Maps/ComponentwiseMapBase.pyeditTransportMaps/Maps/__init__.pyaddTransportMaps/Maps/ParametricMapBase.pyaddTransportMaps/Maps/ConstantMapBase.pyaddTransportMaps/Maps/TransportMapBaseTmp.pyaddTransportMaps/Maps/TriangularComponentwiseMapBase.pyeditDocs/source/Figures/working/taxonomy/taxonomy.texeditTransportMaps/Maps/TransportMapBase.pyaddTransportMaps/Maps/ParametricComponentwiseMapBase.pyTransportMaps/Maps/InverseMapBase.pyTransportMaps/Maps/TriangularComponentwiseMapBase.pyTransportMaps/Maps/__init__.pyTransportMaps/Maps/ParametricMapBase.pyDocs/source/Figures/working/taxonomy/taxonomy.texTransportMaps/Maps/SlicedMapBase.pyTransportMaps/Maps/TransportMapBase.pyTransportMaps/Maps/ComponentwiseMapBase.pyTransportMaps/Maps/ComponentwiseTransportMapBase.pyTransportMaps/Maps/MapBase.pyTransportMaps/Maps/ParametricTriangularComponentwiseMapBase.pyTransportMaps/Maps/ParametricTransportMapBase.pyTransportMaps/Maps/ParametricComponentwiseMapBase.pyTransportMaps/Misc.pyTransportMaps/Maps/ParametricComponentwiseTransportMapBase.py107aa9a4c034ae38f86c4e65ac767a8727bc892f1552514289000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.it... 2019-03-13 17:58:09 -0400107aa9a4c034ae38f86c4e65ac767a8727bc892f...addTransportMaps/Maps/ParametricTriangularComponentwiseMapBase.pyeditTransportMaps/Maps/TransportMapBase.pyeditTransportMaps/Maps/__init__.pyaddTransportMaps/Maps/ComponentwiseTransportMapBase.pyeditTransportMaps/Maps/ComponentwiseMapBase.pyeditTransportMaps/Maps/ParametricComponentwiseMapBase.pyeditTransportMaps/Maps/MapBase.pyeditTransportMaps/Maps/ParametricMapBase.pyaddTransportMaps/Maps/ParametricTransportMapBase.pyeditTransportMaps/Maps/SlicedMapBase.pyeditTransportMaps/Maps/InverseMapBase.pyeditTransportMaps/Misc.pyaddTransportMaps/Maps/ParametricComponentwiseTransportMapBase.pyeditDocs/source/Figures/working/taxonomy/taxonomy.texeditTransportMaps/Maps/TriangularComponentwiseMapBase.pyTransportMaps/Maps/TriangularComponentwiseTransportMapBase.pyDocs/source/Figures/working/taxonomy/taxonomy.tex40479d6aa815ba9a8e4b5acba1b3d31dd9fc1f031552526268000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itstarted working on TriangularCompoentwiseTransportMap 2019-03-13 21:17:48 -040040479d6aa815ba9a8e4b5acba1b3d31dd9fc1f03started working on TriangularCompoentwiseTransportMapaddTransportMaps/Maps/TriangularComponentwiseTransportMapBase.pyeditDocs/source/Figures/working/taxonomy/taxonomy.texTransportMaps/Maps/TriangularComponentwiseTransportMapBase.pyDocs/source/Figures/working/taxonomy/taxonomy.texTransportMaps/Maps/__init__.pyc3052dbeff677fc83b6eb6395657b33bb9bf2f601552573974000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.it... 2019-03-14 10:32:54 -0400c3052dbeff677fc83b6eb6395657b33bb9bf2f60...editDocs/source/Figures/working/taxonomy/taxonomy.texeditTransportMaps/Maps/__init__.pyeditTransportMaps/Maps/TriangularComponentwiseTransportMapBase.pyTransportMaps/Maps/TriangularComponentwiseTransportMapBase.pyDocs/source/Figures/working/taxonomy/taxonomy.texTransportMaps/Maps/__init__.pyTransportMaps/Maps/SlicedMapBase.pyTransportMaps/Maps/TransportMapBase.pyTransportMaps/Maps/TriangularTransportMapBase.pyTransportMaps/Maps/ComponentwiseMapBase.pyTransportMaps/Maps/TriangularTransportMapBaseTmp.pyTransportMaps/Maps/SlicedTransportMapBase.pyTransportMaps/Maps/ParametricComponentwiseMapBase.pyTransportMaps/Maps/ParametricTriangularComponentwiseTransportMapBase.pyTransportMaps/Maps/ConditionalTriangularTransportMapBase.pyTransportMaps/Maps/ParametricComponentwiseTransportMapBase.py8e715d9f15d5e1784a10dae9c87f6222db5a407b1552589239000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.it... 2019-03-14 14:47:19 -04008e715d9f15d5e1784a10dae9c87f6222db5a407b...addTransportMaps/Maps/TriangularTransportMapBaseTmp.pyeditTransportMaps/Maps/ParametricComponentwiseMapBase.pydeleteTransportMaps/Maps/TriangularTransportMapBase.pyeditTransportMaps/Maps/TriangularComponentwiseTransportMapBase.pyaddTransportMaps/Maps/ConditionalTriangularTransportMapBase.pyaddTransportMaps/Maps/SlicedTransportMapBase.pyaddTransportMaps/Maps/ParametricTriangularComponentwiseTransportMapBase.pyeditTransportMaps/Maps/ParametricComponentwiseTransportMapBase.pyeditTransportMaps/Maps/SlicedMapBase.pyeditDocs/source/Figures/working/taxonomy/taxonomy.texeditTransportMaps/Maps/TransportMapBase.pyeditTransportMaps/Maps/__init__.pyeditTransportMaps/Maps/ComponentwiseMapBase.pyTransportMaps/Maps/TriangularListStackedTransportMapBase.pyDocs/source/Figures/working/taxonomy/taxonomy.texTransportMaps/Maps/__init__.pyTransportMaps/Maps/ListStackedTransportMapBase.pyTransportMaps/Maps/ListStackedMapBase.py63061edd249677d764c736b9e1f553509071cc7e1552592339000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.it... 2019-03-14 15:38:59 -040063061edd249677d764c736b9e1f553509071cc7e...addTransportMaps/Maps/ListStackedTransportMapBase.pyeditDocs/source/Figures/working/taxonomy/taxonomy.texeditTransportMaps/Maps/ListStackedMapBase.pyeditTransportMaps/Maps/__init__.pyaddTransportMaps/Maps/TriangularListStackedTransportMapBase.pyTransportMaps/Maps/ListCompositeTransportMapBase.pyTransportMaps/Maps/ListCompositeMapBase.pycca352dcc05a444f3e70330cc1c79556ba48c7e91552593569000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on ListCompositeTransportMapBase 2019-03-14 15:59:29 -0400cca352dcc05a444f3e70330cc1c79556ba48c7e9working on ListCompositeTransportMapBaseaddTransportMaps/Maps/ListCompositeTransportMapBase.pyeditTransportMaps/Maps/ListCompositeMapBase.pyTransportMaps/Maps/ListCompositeMapBase.pyDocs/source/Figures/working/taxonomy/taxonomy.texTransportMaps/Maps/__init__.pyTransportMaps/Maps/ListCompositeTransportMapBase.pye18b20e34870b0709f2b9a5586c34f187daf28d71552612910000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itdone with ListCompositeTransportMap 2019-03-14 21:21:50 -0400e18b20e34870b0709f2b9a5586c34f187daf28d7done with ListCompositeTransportMapeditDocs/source/Figures/working/taxonomy/taxonomy.texeditTransportMaps/Maps/ListCompositeTransportMapBase.pyeditTransportMaps/Maps/__init__.pyeditTransportMaps/Maps/ListCompositeMapBase.pyTransportMaps/Maps/ListCompositeMapBase.pyTransportMaps/Maps/__init__.pyTransportMaps/Maps/InverseTransportMapBase.pyDocs/source/Figures/working/taxonomy/taxonomy.texTransportMaps/Maps/ListCompositeTransportMapBase.pyTransportMaps/Maps/InverseMapBase.pye62753790e97844858a9a890fc97eeae186b45611552613580000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itdone with InverseTransportMap 2019-03-14 21:33:00 -0400e62753790e97844858a9a890fc97eeae186b4561done with InverseTransportMapeditTransportMaps/Maps/__init__.pyeditTransportMaps/Maps/ListCompositeMapBase.pyeditTransportMaps/Maps/ListCompositeTransportMapBase.pyaddTransportMaps/Maps/InverseTransportMapBase.pyeditDocs/source/Figures/working/taxonomy/taxonomy.texeditTransportMaps/Maps/InverseMapBase.pyTransportMaps/Maps/IdentityEmbeddedTransportMapBase.pyDocs/source/Figures/working/taxonomy/taxonomy.texTransportMaps/Maps/__init__.pyTransportMaps/Maps/IdentityTransportMapBase.pyTransportMaps/Maps/PermutationTransportMapBase.py080f9601dcd18dbe42ffb829467e31db6ee9ac751552614584000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.it... 2019-03-14 21:49:44 -0400080f9601dcd18dbe42ffb829467e31db6ee9ac75...addTransportMaps/Maps/PermutationTransportMapBase.pyaddTransportMaps/Maps/IdentityEmbeddedTransportMapBase.pyaddTransportMaps/Maps/IdentityTransportMapBase.pyeditDocs/source/Figures/working/taxonomy/taxonomy.texeditTransportMaps/Maps/__init__.pyTransportMaps/Maps/AffineMapBase.pyTransportMaps/Maps/__init__.pyDocs/source/Figures/working/taxonomy/taxonomy.texTransportMaps/Misc.pyTransportMaps/Maps/SimpleTransportMaps.pyTransportMaps/Maps/MapBase.pyTransportMaps/Maps/AffineTriangularMapBase.pyc1c1fabc95d96b5c599066af72ebf2e175c1e7dc1552616413000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on AffineMaps 2019-03-14 22:20:13 -0400c1c1fabc95d96b5c599066af72ebf2e175c1e7dcworking on AffineMapsaddTransportMaps/Maps/AffineMapBase.pydeleteTransportMaps/Maps/SimpleTransportMaps.pyeditTransportMaps/Maps/MapBase.pyeditTransportMaps/Maps/__init__.pyaddTransportMaps/Maps/AffineTriangularMapBase.pyeditTransportMaps/Misc.pyeditDocs/source/Figures/working/taxonomy/taxonomy.texTransportMaps/Maps/FullTransportMaps.pyTransportMaps/Maps/AffineMapBase.pyTransportMaps/Maps/AffineTransportMapBase.pyTransportMaps/Maps/__init__.pyDocs/source/Figures/working/taxonomy/taxonomy.texTransportMaps/Maps/DeprecatedConditionallyLinearMapBase.pyTransportMaps/Maps/LinearMaps.pyd2eb4d2ae5157766587b1c29a7de00e975c82e6f1552662329000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.it... 2019-03-15 11:05:29 -0400d2eb4d2ae5157766587b1c29a7de00e975c82e6f...editTransportMaps/Maps/AffineMapBase.pyaddTransportMaps/Maps/AffineTransportMapBase.pydeleteTransportMaps/Maps/LinearMaps.pyeditTransportMaps/Maps/__init__.pyeditDocs/source/Figures/working/taxonomy/taxonomy.texaddTransportMaps/Maps/DeprecatedConditionallyLinearMapBase.pydeleteTransportMaps/Maps/FullTransportMaps.pyTransportMaps/Maps/TriangularComponentwiseTransportMapBase.pyTransportMaps/Maps/DiagonalComponentwiseTransportMapBase.pyTransportMaps/Maps/DiagonalIsotropicTransportMapBase.pyTransportMaps/Maps/ParametricMapBase.pyDocs/source/Figures/working/taxonomy/taxonomy.texTransportMaps/Maps/__init__.pyTransportMaps/Maps/MapBaseTmp.pyTransportMaps/Maps/TransportMapBase.pyTransportMaps/Maps/ComponentwiseMapBase.pyTransportMaps/Maps/MapBase.py371e415f9620952a80b3d9f97e448d68b5888c761552663621000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.it... 2019-03-15 11:27:01 -0400371e415f9620952a80b3d9f97e448d68b5888c76...editTransportMaps/Maps/ComponentwiseMapBase.pyeditTransportMaps/Maps/TransportMapBase.pyaddTransportMaps/Maps/DiagonalComponentwiseTransportMapBase.pyeditTransportMaps/Maps/ParametricMapBase.pyeditDocs/source/Figures/working/taxonomy/taxonomy.texdeleteTransportMaps/Maps/MapBaseTmp.pyeditTransportMaps/Maps/TriangularComponentwiseTransportMapBase.pyaddTransportMaps/Maps/DiagonalIsotropicTransportMapBase.pyeditTransportMaps/Maps/MapBase.pyeditTransportMaps/Maps/__init__.pyTransportMaps/Maps/LinearSpanParametricTriangularComponentwiseMapBase.pyDocs/source/Figures/working/taxonomy/taxonomy.texTransportMaps/Maps/__init__.py97dae6b2a85dcb0e085bc7caf31bc7463ab691481552665319000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.it... 2019-03-15 11:55:19 -040097dae6b2a85dcb0e085bc7caf31bc7463ab69148...addTransportMaps/Maps/LinearSpanParametricTriangularComponentwiseMapBase.pyeditDocs/source/Figures/working/taxonomy/taxonomy.texeditTransportMaps/Maps/__init__.pyTransportMaps/Maps/IntegratedExponentialParametricTriangularComponentwiseTransportMapBase.pyTransportMaps/Maps/TriangularTransportMaps.pyTransportMaps/Maps/LinearSpanParametricTriangularComponentwiseMapBase.pyDocs/source/Figures/working/taxonomy/taxonomy.texTransportMaps/Maps/__init__.pyTransportMaps/Maps/IntegratedSquaredParametricTriangularComponentwiseTransportMapBase.pyTransportMaps/Maps/NonMonotoneLinearSpanParametricTriangularComponentwiseTransportMapBase.py1d9fb660763a6bc2dcbb53027d1cc7293b6a44391552678220000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.it... 2019-03-15 15:30:20 -04001d9fb660763a6bc2dcbb53027d1cc7293b6a4439...editDocs/source/Figures/working/taxonomy/taxonomy.texaddTransportMaps/Maps/IntegratedExponentialParametricTriangularComponentwiseTransportMapBase.pyaddTransportMaps/Maps/IntegratedSquaredParametricTriangularComponentwiseTransportMapBase.pyeditTransportMaps/Maps/LinearSpanParametricTriangularComponentwiseMapBase.pyaddTransportMaps/Maps/NonMonotoneLinearSpanParametricTriangularComponentwiseTransportMapBase.pyeditTransportMaps/Maps/TriangularTransportMaps.pyeditTransportMaps/Maps/__init__.pyTransportMaps/Maps/Decomposable/SequentialInferenceMaps.pyb01b6cffb40a7b25dbd2627375a729d8f73dd6451552686014000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itstarting with debugging of Maps 2019-03-15 17:40:14 -0400b01b6cffb40a7b25dbd2627375a729d8f73dd645starting with debugging of MapseditTransportMaps/Maps/Decomposable/SequentialInferenceMaps.pyDocs/source/Figures/working/taxonomy/taxonomy.texa6ecb9c84d30df1b40fddba2442f2b54e8ea21d41552686058000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itstarting with debugging of Maps 2019-03-15 17:40:58 -0400a6ecb9c84d30df1b40fddba2442f2b54e8ea21d4starting with debugging of MapseditDocs/source/Figures/working/taxonomy/taxonomy.texTransportMaps/Maps/__init__.pyTransportMaps/Maps/ODEs/DiscretizedODEsMaps.pyTransportMaps/Maps/DiscretizedODEsMaps.pyTransportMaps/Maps/Decomposable/__init__.pyTransportMaps/Maps/ODEs/__init__.pyac70334dfe76434d7febb0c486e961ca5d3b142b1552686678000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.it... 2019-03-15 17:51:18 -0400ac70334dfe76434d7febb0c486e961ca5d3b142b...editTransportMaps/Maps/Decomposable/__init__.pyaddTransportMaps/Maps/ODEs/__init__.pydeleteTransportMaps/Maps/DiscretizedODEsMaps.pyaddTransportMaps/Maps/ODEs/DiscretizedODEsMaps.pyeditTransportMaps/Maps/__init__.pyTransportMaps/Algorithms/Adaptivity/KullbackLeiblerAdaptivity.pyTransportMaps/Maps/TriangularComponentwiseTransportMapBase.pyTransportMaps/Distributions/Examples/RailwayVehicleDynamics/Coradia175/Coradia175VehicleStateSpace.pyTransportMaps/__init__.pyTransportMaps/Distributions/FrozenDistributions.pyTransportMaps/Maps/IntegratedExponentialParametricTriangularComponentwiseTransportMapBase.pyTransportMaps/Maps/__init__.pyTransportMaps/Distributions/Examples/Lorenz96/Lorenz96Distributions.pyTransportMaps/Maps/ComponentwiseMapBase.pyTransportMaps/Maps/ComponentwiseTransportMapBase.pyTransportMaps/Likelihoods/LikelihoodBase.pyTransportMaps/Distributions/Decomposable/LinearGaussianSequentialInferenceDistributions.pyTransportMaps/Algorithms/SequentialInference/SequentialInferenceBase.pyTransportMaps/Distributions/TransportMapDistributions.pyTransportMaps/Maps/LinearSpanParametricTriangularComponentwiseMapBase.pyTransportMaps/Distributions/Examples/Lorenz63/Lorenz63Distributions.pyTransportMaps/Maps/FrozenTriangularTransportMaps.pyTransportMaps/Defaults.pyTransportMaps/Maps/ParametricTransportMapBase.pyTransportMaps/Maps/ParametricComponentwiseMapBase.pyTransportMaps/Maps/Decomposable/SequentialInferenceMapFactoryBase.pyTransportMaps/Maps/ParametricComponentwiseTransportMapBase.py05106532485603db4a3cde3c381a31d1e9ef99331552689417000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itunit testing Maps 2019-03-15 18:36:57 -040005106532485603db4a3cde3c381a31d1e9ef9933unit testing MapseditTransportMaps/Distributions/Examples/RailwayVehicleDynamics/Coradia175/Coradia175VehicleStateSpace.pyeditTransportMaps/Maps/ParametricComponentwiseTransportMapBase.pyeditTransportMaps/Distributions/Decomposable/LinearGaussianSequentialInferenceDistributions.pyeditTransportMaps/Maps/ComponentwiseTransportMapBase.pyeditTransportMaps/Distributions/TransportMapDistributions.pyeditTransportMaps/Likelihoods/LikelihoodBase.pyeditTransportMaps/Maps/FrozenTriangularTransportMaps.pyeditTransportMaps/Defaults.pyeditTransportMaps/Maps/LinearSpanParametricTriangularComponentwiseMapBase.pyeditTransportMaps/Algorithms/Adaptivity/KullbackLeiblerAdaptivity.pyeditTransportMaps/Maps/Decomposable/SequentialInferenceMapFactoryBase.pyeditTransportMaps/Distributions/Examples/Lorenz96/Lorenz96Distributions.pyeditTransportMaps/Maps/__init__.pyeditTransportMaps/__init__.pyeditTransportMaps/Distributions/FrozenDistributions.pyeditTransportMaps/Maps/ParametricComponentwiseMapBase.pyeditTransportMaps/Algorithms/SequentialInference/SequentialInferenceBase.pyeditTransportMaps/Distributions/Examples/Lorenz63/Lorenz63Distributions.pyeditTransportMaps/Maps/TriangularComponentwiseTransportMapBase.pyeditTransportMaps/Maps/IntegratedExponentialParametricTriangularComponentwiseTransportMapBase.pyeditTransportMaps/Maps/ParametricTransportMapBase.pyeditTransportMaps/Maps/ComponentwiseMapBase.pyTransportMaps/tests/test_transportmaps.pyTransportMaps/Maps/LinearSpanParametricTriangularComponentwiseMapBase.pyDocs/source/Figures/working/taxonomy/taxonomy.texTransportMaps/Maps/NonMonotoneLinearSpanParametricTriangularComponentwiseTransportMapBase.py55a25ae970c8fb70a0f0aad7667e198de08d9bb21552697964000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on unittest Maps 2019-03-15 20:59:24 -040055a25ae970c8fb70a0f0aad7667e198de08d9bb2working on unittest MapseditTransportMaps/tests/test_transportmaps.pyeditTransportMaps/Maps/NonMonotoneLinearSpanParametricTriangularComponentwiseTransportMapBase.pyeditDocs/source/Figures/working/taxonomy/taxonomy.texeditTransportMaps/Maps/LinearSpanParametricTriangularComponentwiseMapBase.pyTransportMaps/tests/test_transportmaps.pyTransportMaps/Maps/InverseParametricTransportMapBase.pyTransportMaps/Maps/ListCompositeTransportMapBase.pyTransportMaps/Maps/InverseMapBase.pyTransportMaps/Maps/InverseParametricMapBase.pyTransportMaps/Maps/ListCompositeMapBase.pyDocs/source/Figures/working/taxonomy/taxonomy.texTransportMaps/Maps/InverseTransportMapBase.pyTransportMaps/Maps/__init__.pyTransportMaps/Maps/IntegratedSquaredParametricTriangularComponentwiseTransportMapBase.pyTransportMaps/Misc.pyTransportMaps/Maps/ListStackedMapBase.pyc26504259296362ecc7f74f46fba0fd1ab7e70d11552767145000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on unit tests... 2019-03-16 16:12:25 -0400c26504259296362ecc7f74f46fba0fd1ab7e70d1working on unit tests...editTransportMaps/tests/test_transportmaps.pyeditTransportMaps/Maps/ListCompositeTransportMapBase.pyeditTransportMaps/Misc.pyeditDocs/source/Figures/working/taxonomy/taxonomy.texeditTransportMaps/Maps/ListCompositeMapBase.pyeditTransportMaps/Maps/InverseTransportMapBase.pyeditTransportMaps/Maps/__init__.pyeditTransportMaps/Maps/InverseMapBase.pyeditTransportMaps/Maps/ListStackedMapBase.pyeditTransportMaps/Maps/IntegratedSquaredParametricTriangularComponentwiseTransportMapBase.pyaddTransportMaps/Maps/InverseParametricMapBase.pyaddTransportMaps/Maps/InverseParametricTransportMapBase.pyTransportMaps/tests/test_transportmaps.pyTransportMaps/Maps/InverseParametricTransportMapBase.pyTransportMaps/Maps/InverseParametricMapBase.pydb60e1905545ce9138f8c1938a530269ddea12f81552767571000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on unittests 2019-03-16 16:19:31 -0400db60e1905545ce9138f8c1938a530269ddea12f8working on unittestseditTransportMaps/Maps/InverseParametricMapBase.pyeditTransportMaps/tests/test_transportmaps.pyeditTransportMaps/Maps/InverseParametricTransportMapBase.pyTransportMaps/tests/test_transportmaps.pyTransportMaps/Maps/AffineMapBase.pyTransportMaps/Maps/IntegratedExponentialParametricTriangularComponentwiseTransportMapBase.pyTransportMaps/Maps/AffineTransportMapBase.pyTransportMaps/Maps/InverseTransportMapBase.pyTransportMaps/Maps/IntegratedSquaredParametricTriangularComponentwiseTransportMapBase.pyTransportMaps/Maps/AffineTriangularMapBase.py1e926e29722d5074cac7c0c58801bf75831c8e1c1552785261000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itpasses test_transportmaps 2019-03-16 21:14:21 -04001e926e29722d5074cac7c0c58801bf75831c8e1cpasses test_transportmapseditTransportMaps/Maps/AffineMapBase.pyeditTransportMaps/Maps/AffineTransportMapBase.pyeditTransportMaps/Maps/IntegratedExponentialParametricTriangularComponentwiseTransportMapBase.pyeditTransportMaps/Maps/IntegratedSquaredParametricTriangularComponentwiseTransportMapBase.pyeditTransportMaps/Maps/AffineTriangularMapBase.pyeditTransportMaps/Maps/InverseTransportMapBase.pyeditTransportMaps/tests/test_transportmaps.pyTransportMaps/Maps/TriangularComponentwiseTransportMapBase.pyTransportMaps/Functionals/LinearSpanApproximationBase.pyTransportMaps/tests/test_kl_minimization.pyTransportMaps/Maps/ListCompositeTransportMapBase.pyTransportMaps/Distributions/FrozenDistributions.pyTransportMaps/Maps/IntegratedExponentialParametricTriangularComponentwiseTransportMapBase.pyTransportMaps/Maps/AffineTransportMapBase.pyTransportMaps/Maps/ComponentwiseMapBase.pyTransportMaps/Maps/MapBase.pyTransportMaps/Maps/TransportMapBaseTmp.pyTransportMaps/tests/test_distributions.pyTransportMaps/Maps/TriangularTransportMapBaseTmp.pyTransportMaps/Maps/AffineMapBase.pyTransportMaps/Maps/TriangularTransportMaps.pyTransportMaps/Maps/LinearSpanParametricTriangularComponentwiseMapBase.pyTransportMaps/Maps/FrozenTriangularTransportMaps.pyTransportMaps/Defaults.pyTransportMaps/Maps/ParametricTransportMapBase.pyTransportMaps/Functionals/ParametricFunctionApproximationBase.pyTransportMaps/Maps/ParametricTriangularComponentwiseTransportMapBase.pyTransportMaps/Functionals/MonotonicFunctionApproximations.pyTransportMaps/Maps/NonMonotoneLinearSpanParametricTriangularComponentwiseTransportMapBase.py94c9839ba4d88512bd39ada8ad212567cc3383591552930866000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itfixed most of unittests... 2019-03-18 13:41:06 -040094c9839ba4d88512bd39ada8ad212567cc338359fixed most of unittests...editTransportMaps/Maps/ListCompositeTransportMapBase.pyeditTransportMaps/Distributions/FrozenDistributions.pydeleteTransportMaps/Maps/TriangularTransportMapBaseTmp.pyeditTransportMaps/Maps/TriangularComponentwiseTransportMapBase.pyeditTransportMaps/Maps/LinearSpanParametricTriangularComponentwiseMapBase.pyeditTransportMaps/Functionals/MonotonicFunctionApproximations.pyeditTransportMaps/Functionals/ParametricFunctionApproximationBase.pyeditTransportMaps/Maps/ParametricTriangularComponentwiseTransportMapBase.pyeditTransportMaps/Maps/ParametricTransportMapBase.pyeditTransportMaps/Maps/AffineTransportMapBase.pyeditTransportMaps/tests/test_distributions.pyeditTransportMaps/Maps/FrozenTriangularTransportMaps.pyeditTransportMaps/Maps/MapBase.pyeditTransportMaps/Maps/NonMonotoneLinearSpanParametricTriangularComponentwiseTransportMapBase.pyeditTransportMaps/Functionals/LinearSpanApproximationBase.pyeditTransportMaps/Maps/AffineMapBase.pyeditTransportMaps/tests/test_kl_minimization.pyeditTransportMaps/Maps/ComponentwiseMapBase.pyeditTransportMaps/Defaults.pyeditTransportMaps/Maps/IntegratedExponentialParametricTriangularComponentwiseTransportMapBase.pydeleteTransportMaps/Maps/TransportMapBaseTmp.pydeleteTransportMaps/Maps/TriangularTransportMaps.pyTransportMaps/tests/test_kl_divergence.pyTransportMaps/Misc.pyDocs/source/Figures/working/taxonomy/taxonomy.texc5581a8b733121068b7e9c2be3a9135eabf6774e1552931377000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itsome other fixes 2019-03-18 13:49:37 -0400c5581a8b733121068b7e9c2be3a9135eabf6774esome other fixeseditTransportMaps/Misc.pyeditTransportMaps/tests/test_kl_divergence.pyeditDocs/source/Figures/working/taxonomy/taxonomy.texTransportMaps/Distributions/Examples/SimpleDistributions.pyTransportMaps/Distributions/ConditionalDistributions.pyTransportMaps/Diagnostics/Validators.pyTransportMaps/__init__.pyTransportMaps/Samplers/MarkovChainSamplers.pyTransportMaps/Distributions/FrozenDistributions.pyTransportMaps/Distributions/DistributionFromSamplesBase.pyTransportMaps/Distributions/DistributionBase.pyTransportMaps/Algorithms/SparsityIdentification/RegularizedMap.pyTransportMaps/Distributions/ParametricDistributionBase.pyDocs/source/Figures/working/taxonomy/taxonomy.texTransportMaps/Distributions/ParametricTransportMapDistributionBase.pyTransportMaps/Distributions/ParametricTransportMapDistributions.pyTransportMaps/Likelihoods/LikelihoodBase.pyTransportMaps/Distributions/Examples/BiochemicalOxygenDemand/BODDistributions.pyTransportMaps/Distributions/TransportMapDistributions.pyTransportMaps/Distributions/ProductDistributionBase.pyTransportMaps/Distributions/Decomposable/SequentialInferenceDistributions.pyTransportMaps/Algorithms/SparsityIdentification/SparsityIdentificationNonGaussian.pyTransportMaps/Distributions/FactorizedDistributionBase.pyTransportMaps/Distributions/TransportMapDistributionBase.pyTransportMaps/Distributions/ConditionalDistributionBase.pyTransportMaps/Distributions/__init__.pyTransportMaps/Distributions/Examples/StochasticVolatility/StocVolHyperDistributions.py19bbdcbce4c1361f762a88da23f7a1b5ba42ebe11552935602000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on distributions 2019-03-18 15:00:02 -040019bbdcbce4c1361f762a88da23f7a1b5ba42ebe1working on distributionseditTransportMaps/Distributions/ConditionalDistributions.pyeditTransportMaps/__init__.pyeditDocs/source/Figures/working/taxonomy/taxonomy.texeditTransportMaps/Distributions/FrozenDistributions.pyeditTransportMaps/Distributions/ParametricDistributionBase.pyaddTransportMaps/Distributions/TransportMapDistributionBase.pyeditTransportMaps/Samplers/MarkovChainSamplers.pyeditTransportMaps/Distributions/Decomposable/SequentialInferenceDistributions.pyaddTransportMaps/Distributions/ProductDistributionBase.pyeditTransportMaps/Distributions/__init__.pydeleteTransportMaps/Distributions/TransportMapDistributions.pyeditTransportMaps/Distributions/Examples/SimpleDistributions.pyeditTransportMaps/Distributions/Examples/BiochemicalOxygenDemand/BODDistributions.pyeditTransportMaps/Algorithms/SparsityIdentification/SparsityIdentificationNonGaussian.pyaddTransportMaps/Distributions/ParametricTransportMapDistributions.pyaddTransportMaps/Distributions/ParametricTransportMapDistributionBase.pyaddTransportMaps/Distributions/ConditionalDistributionBase.pyaddTransportMaps/Distributions/DistributionFromSamplesBase.pyeditTransportMaps/Distributions/Examples/StochasticVolatility/StocVolHyperDistributions.pyaddTransportMaps/Distributions/FactorizedDistributionBase.pyeditTransportMaps/Diagnostics/Validators.pyeditTransportMaps/Distributions/DistributionBase.pyeditTransportMaps/Likelihoods/LikelihoodBase.pyeditTransportMaps/Algorithms/SparsityIdentification/RegularizedMap.pyTransportMaps/Distributions/Examples/BiochemicalOxygenDemand/BODDistributions.pyTransportMaps/Distributions/FrozenDistributions.pyTransportMaps/Maps/ParametricTransportMapBase.pyTransportMaps/tests/test_transportmap_distributions.pyTransportMaps/Distributions/ParametricTransportMapDistributions.pyTransportMaps/Distributions/TransportMapDistributionBase.pyTransportMaps/Maps/TransportMapBase.pyTransportMaps/Functionals/FunctionBase.pyTransportMaps/Distributions/__init__.py6fd5f05f13a7e9856f1a5bffd386e0ed813ab6e21552936911000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itdistributions done 2019-03-18 15:21:51 -04006fd5f05f13a7e9856f1a5bffd386e0ed813ab6e2distributions doneeditTransportMaps/Maps/TransportMapBase.pyeditTransportMaps/Distributions/FrozenDistributions.pyeditTransportMaps/Functionals/FunctionBase.pyeditTransportMaps/Distributions/ParametricTransportMapDistributions.pyeditTransportMaps/Distributions/__init__.pyeditTransportMaps/Distributions/Examples/BiochemicalOxygenDemand/BODDistributions.pyeditTransportMaps/Maps/ParametricTransportMapBase.pyeditTransportMaps/tests/test_transportmap_distributions.pyeditTransportMaps/Distributions/TransportMapDistributionBase.pyTransportMaps/Distributions/TransportMapDistributions.py0255155c36d95e316ecd909179497957338df94a1552936935000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itadding missing file 2019-03-18 15:22:15 -04000255155c36d95e316ecd909179497957338df94aadding missing fileaddTransportMaps/Distributions/TransportMapDistributions.pyTransportMaps/Functionals/AlgebraicLinearSpanApproximations.pyTransportMaps/Functionals/LinearSpanTensorizedParametricFunctionalBase.pyTransportMaps/Functionals/LinearSpanApproximationBase.pyTransportMaps/Functionals/AnchoredIntegratedSquaredParametricFunctionalBase.pyTransportMaps/Functionals/ParametricFunctionalBase.pyTransportMaps/Functionals/IntegratedSquaredParametricMonotoneFunctionalBase.pyDocs/source/Figures/working/taxonomy/taxonomy.texTransportMaps/Functionals/PointwiseMonotoneLinearSpanTensorizedParametricFunctionalBase.pyTransportMaps/Functionals/__init__.pyTransportMaps/Functionals/FunctionalBase.pyTransportMaps/Functionals/TensorizedParametricFunctionalBase.pyTransportMaps/Functionals/ParametricMonotoneFunctionalBase.pyTransportMaps/Functionals/ParametricFunctionApproximationBase.pyTransportMaps/Functionals/IntegratedExponentialParametricMonotoneFunctionalBase.pyTransportMaps/Functionals/FunctionBase.pyTransportMaps/Functionals/MonotonicFunctionApproximations.pyTransportMaps/Functionals/MonotoneFunctionalBase.pyca4af00c60368248d874f4025c37dc39b38a02161552943962000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on Functionals 2019-03-18 17:19:22 -0400ca4af00c60368248d874f4025c37dc39b38a0216working on FunctionalsaddTransportMaps/Functionals/TensorizedParametricFunctionalBase.pyeditDocs/source/Figures/working/taxonomy/taxonomy.texdeleteTransportMaps/Functionals/ParametricFunctionApproximationBase.pyaddTransportMaps/Functionals/ParametricMonotoneFunctionalBase.pyaddTransportMaps/Functionals/MonotoneFunctionalBase.pyaddTransportMaps/Functionals/FunctionalBase.pydeleteTransportMaps/Functionals/AlgebraicLinearSpanApproximations.pyaddTransportMaps/Functionals/PointwiseMonotoneLinearSpanTensorizedParametricFunctionalBase.pyaddTransportMaps/Functionals/LinearSpanTensorizedParametricFunctionalBase.pydeleteTransportMaps/Functionals/FunctionBase.pydeleteTransportMaps/Functionals/LinearSpanApproximationBase.pyaddTransportMaps/Functionals/AnchoredIntegratedSquaredParametricFunctionalBase.pyaddTransportMaps/Functionals/ParametricFunctionalBase.pyaddTransportMaps/Functionals/IntegratedSquaredParametricMonotoneFunctionalBase.pyaddTransportMaps/Functionals/IntegratedExponentialParametricMonotoneFunctionalBase.pydeleteTransportMaps/Functionals/MonotonicFunctionApproximations.pyeditTransportMaps/Functionals/__init__.pyTransportMaps/Algorithms/Adaptivity/KullbackLeiblerAdaptivity.pyTransportMaps/Functionals/IntegratedSquaredParametricMonotoneFunctionalBase.pyTransportMaps/Maps/IntegratedExponentialParametricTriangularComponentwiseTransportMapBase.pyDocs/source/Figures/working/taxonomy/taxonomy.texTransportMaps/Functionals/PointwiseMonotoneLinearSpanTensorizedParametricFunctionalBase.pyTransportMaps/Functionals/FrozenMonotonicFunctions.pyTransportMaps/Maps/IntegratedSquaredParametricTriangularComponentwiseTransportMapBase.pyTransportMaps/Likelihoods/LikelihoodBase.pyTransportMaps/Maps/LinearSpanParametricTriangularComponentwiseMapBase.pyTransportMaps/Defaults.pyTransportMaps/Functionals/ParametricMonotoneFunctionalBase.pyTransportMaps/Maps/ParametricTriangularComponentwiseTransportMapBase.pyTransportMaps/Functionals/IntegratedExponentialParametricMonotoneFunctionalBase.pyTransportMaps/Functionals/ProductDistributionParametricPullbackComponentFunctionBase.pyTransportMaps/Distributions/Examples/StochasticVolatility/StocVolHyperDistributions.py3c7040602599b6b58281e9989a48c24d774ea3041552945457000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.ittesting Functionals 2019-03-18 17:44:17 -04003c7040602599b6b58281e9989a48c24d774ea304testing FunctionalseditTransportMaps/Functionals/ProductDistributionParametricPullbackComponentFunctionBase.pyeditTransportMaps/Defaults.pyeditTransportMaps/Likelihoods/LikelihoodBase.pyeditDocs/source/Figures/working/taxonomy/taxonomy.texeditTransportMaps/Algorithms/Adaptivity/KullbackLeiblerAdaptivity.pyeditTransportMaps/Maps/ParametricTriangularComponentwiseTransportMapBase.pyeditTransportMaps/Functionals/IntegratedExponentialParametricMonotoneFunctionalBase.pyeditTransportMaps/Maps/IntegratedExponentialParametricTriangularComponentwiseTransportMapBase.pyeditTransportMaps/Functionals/PointwiseMonotoneLinearSpanTensorizedParametricFunctionalBase.pyeditTransportMaps/Maps/IntegratedSquaredParametricTriangularComponentwiseTransportMapBase.pyeditTransportMaps/Functionals/IntegratedSquaredParametricMonotoneFunctionalBase.pyeditTransportMaps/Maps/LinearSpanParametricTriangularComponentwiseMapBase.pyeditTransportMaps/Distributions/Examples/StochasticVolatility/StocVolHyperDistributions.pyeditTransportMaps/Functionals/FrozenMonotonicFunctions.pyeditTransportMaps/Functionals/ParametricMonotoneFunctionalBase.pyTransportMaps/_version.pya38e4efef7691cee15043b676e04c3b7f202cd8e1552945814000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itupdated distribution 2019-03-18 17:50:14 -0400a38e4efef7691cee15043b676e04c3b7f202cd8eupdated distributioneditTransportMaps/_version.pyTransportMaps/Functionals/LinearSpanTensorizedParametricFunctionalBase.pycfaf9ebc29b048cec3bc377e0fa0c998e84d92201552946484000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itsome fixed 2019-03-18 18:01:24 -0400cfaf9ebc29b048cec3bc377e0fa0c998e84d9220some fixededitTransportMaps/Functionals/LinearSpanTensorizedParametricFunctionalBase.pyTransportMaps/tests/test_kl_divergence.pyTransportMaps/Functionals/LinearSpanTensorizedParametricFunctionalBase.pyTransportMaps/tests/TestFunctions.pyTransportMaps/tests/test_L2_misfit.pyTransportMaps/Functionals/IntegratedSquaredParametricMonotoneFunctionalBase.pyTransportMaps/Defaults.pyTransportMaps/Functionals/PointwiseMonotoneLinearSpanTensorizedParametricFunctionalBase.pyTransportMaps/Functionals/IntegratedExponentialParametricMonotoneFunctionalBase.pybe95c901e41d64430b9674f53d583164afd559021553029478000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itfixing unittests 2019-03-19 17:04:38 -0400be95c901e41d64430b9674f53d583164afd55902fixing unittestseditTransportMaps/Functionals/LinearSpanTensorizedParametricFunctionalBase.pyeditTransportMaps/Functionals/IntegratedExponentialParametricMonotoneFunctionalBase.pyeditTransportMaps/Defaults.pyeditTransportMaps/Functionals/IntegratedSquaredParametricMonotoneFunctionalBase.pyeditTransportMaps/Functionals/PointwiseMonotoneLinearSpanTensorizedParametricFunctionalBase.pyeditTransportMaps/tests/test_kl_divergence.pyeditTransportMaps/tests/TestFunctions.pyeditTransportMaps/tests/test_L2_misfit.pyTransportMaps/Maps/ParametricTriangularComponentwiseTransportMapBase.pyTransportMaps/tests/test_kl_minimization.pyd11cc27b8025fa92933050e53abbc88f6a9558431553177001000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itsome fixes 2019-03-21 10:03:21 -0400d11cc27b8025fa92933050e53abbc88f6a955843some fixeseditTransportMaps/Maps/ParametricTriangularComponentwiseTransportMapBase.pyeditTransportMaps/tests/test_kl_minimization.pyTransportMaps/Distributions/Examples/PoissonProblem/PoissonProblems.pyExamples/research/ReactionDiffusion/solver.pyfdeeca02beb518d65c50d98e2a66f663d4c0ac151553307773000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on reaction diffusion problem 2019-03-22 22:22:53 -0400fdeeca02beb518d65c50d98e2a66f663d4c0ac15working on reaction diffusion problemeditTransportMaps/Distributions/Examples/PoissonProblem/PoissonProblems.pyaddExamples/research/ReactionDiffusion/solver.pyExamples/research/Burgers/solver.pyExamples/research/ReactionDiffusion/solver.py3825296783d7f53c672571824fea23ab9dd3458e1553491571000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on pdes 2019-03-25 01:26:11 -04003825296783d7f53c672571824fea23ab9dd3458eworking on pdesaddExamples/research/Burgers/solver.pyeditExamples/research/ReactionDiffusion/solver.pyExamples/research/ReactionDiffusion/FitzHugh-Nagumo.py7f7091ff0cca686e7d4ba7190ce8b4b66dba7e571553520046000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itfitz hugh 2019-03-25 08:20:46 -05007f7091ff0cca686e7d4ba7190ce8b4b66dba7e57fitz hughaddExamples/research/ReactionDiffusion/FitzHugh-Nagumo.pyExamples/research/Burgers/solver.pyExamples/research/ReactionDiffusion/FitzHugh-Nagumo.py9f43183b2f1342aedfa36f2f167f6143398869841553526643000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itstill picking a pde... 2019-03-25 10:10:43 -05009f43183b2f1342aedfa36f2f167f614339886984still picking a pde...editExamples/research/Burgers/solver.pyeditExamples/research/ReactionDiffusion/FitzHugh-Nagumo.pyTransportMaps/tests/test_transportmaps.pyTransportMaps/Builders/BuilderBase.pyTransportMaps/tests/test_transportmap_distributions_sampling.pyTransportMaps/tests/test_kl_minimization.pyTransportMaps/Maps/ListStackedTransportMapBase.pyTransportMaps/__init__.pyTransportMaps/tests/test_sequential_inference.pyTransportMaps/Maps/TriangularListStackedTransportMapBase.pyTransportMaps/Functionals/PointwiseMonotoneLinearSpanTensorizedParametricFunctionalBase.pyTransportMaps/Maps/__init__.pyTransportMaps/CLI/PostprocessBase.pyTransportMaps/tests/test_transportmap_distributions.pyTransportMaps/tests/test_L2_minimization.pyTransportMaps/Algorithms/SequentialInference/SequentialInferenceBase.pyTransportMaps/tests/test_distributions.pyTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyTransportMaps/tests/test_scripts.pyTransportMaps/Defaults.pyTransportMaps/CLI/ConstructionScriptBase.py0f10066e1d2dcb844461a4c2c9c2135e51964c601553536858000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itleft two l2 minimization errors... 2019-03-25 14:00:58 -04000f10066e1d2dcb844461a4c2c9c2135e51964c60left two l2 minimization errors...editTransportMaps/Maps/ListStackedTransportMapBase.pyeditTransportMaps/tests/test_sequential_inference.pyeditTransportMaps/CLI/ConstructionScriptBase.pyeditTransportMaps/Defaults.pyeditTransportMaps/Functionals/PointwiseMonotoneLinearSpanTensorizedParametricFunctionalBase.pyeditTransportMaps/tests/test_transportmap_distributions.pyeditTransportMaps/Maps/TriangularListStackedTransportMapBase.pyeditTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyeditTransportMaps/Builders/BuilderBase.pyeditTransportMaps/Maps/__init__.pyeditTransportMaps/tests/test_L2_minimization.pyeditTransportMaps/tests/test_transportmap_distributions_sampling.pyeditTransportMaps/tests/test_kl_minimization.pyeditTransportMaps/__init__.pyeditTransportMaps/Algorithms/SequentialInference/SequentialInferenceBase.pyeditTransportMaps/tests/test_scripts.pyeditTransportMaps/tests/test_transportmaps.pyeditTransportMaps/tests/test_distributions.pyeditTransportMaps/CLI/PostprocessBase.pyTransportMaps/tests/test_L2_minimization.pyb093a16b4ac59b9090734660cc5d2183a3cf4ba51553538854000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itpasses all tests 2019-03-25 14:34:14 -0400b093a16b4ac59b9090734660cc5d2183a3cf4ba5passes all testseditTransportMaps/tests/test_L2_minimization.pyExamples/research/ReactionDiffusion/FitzHugh-Nagumo.py2a8a977ded939adb84fa80257cfc5aa65a7422c81553609818000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itpicking pde... 2019-03-26 10:16:58 -04002a8a977ded939adb84fa80257cfc5aa65a7422c8picking pde...editExamples/research/ReactionDiffusion/FitzHugh-Nagumo.pyTransportMaps/Maps/Defaults.py9bea764756da772f4ec26a787c897462a515fe5c1553624786000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itadded missing file 2019-03-26 14:26:26 -04009bea764756da772f4ec26a787c897462a515fe5cadded missing fileaddTransportMaps/Maps/Defaults.pyTransportMaps/Distributions/Examples/BurgersPDE/BurgersProblems.pyTransportMaps/DOLFIN/SolverBase.pyTransportMaps/Distributions/Examples/PoissonProblem/PoissonProblems.pyTransportMaps/__init__.pyTransportMaps/Distributions/Examples/BurgersPDE/__init__.pyTransportMaps/DOLFIN/__init__.py32d518441b27ae9f4f613048e8dfbb3c98cb12ae1553647029000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on Burgers test problem 2019-03-26 20:37:09 -040032d518441b27ae9f4f613048e8dfbb3c98cb12aeworking on Burgers test problemaddTransportMaps/DOLFIN/SolverBase.pyaddTransportMaps/Distributions/Examples/BurgersPDE/__init__.pyeditTransportMaps/Distributions/Examples/PoissonProblem/PoissonProblems.pyeditTransportMaps/__init__.pyaddTransportMaps/Distributions/Examples/BurgersPDE/BurgersProblems.pyaddTransportMaps/DOLFIN/__init__.pyExamples/research/Burgers/solver_1d.pyded4d9d5d911daafc54985eb45c8e0135d5b82ca1553649464000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on burgers; 2019-03-26 21:17:44 -0400ded4d9d5d911daafc54985eb45c8e0135d5b82caworking on burgers;addExamples/research/Burgers/solver_1d.pyExamples/research/Burgers/solver_1d.pyExamples/research/Burgers/pinned_gaussian_process.pyTransportMaps/Distributions/Examples/BurgersPDE/BurgersProblems.pyTransportMaps/Distributions/Examples/BurgersPDE/BurgersDistributions.py94f673b4deeb2d3e3c5858f842693dc71307563a1553723240000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on Burgers 2019-03-27 17:47:20 -040094f673b4deeb2d3e3c5858f842693dc71307563aworking on BurgersaddExamples/research/Burgers/pinned_gaussian_process.pyeditTransportMaps/Distributions/Examples/BurgersPDE/BurgersProblems.pyeditExamples/research/Burgers/solver_1d.pyaddTransportMaps/Distributions/Examples/BurgersPDE/BurgersDistributions.pyExamples/research/Burgers/solver_1d.pyTransportMaps/Distributions/Examples/BurgersPDE/BurgersProblems.pyTransportMaps/Distributions/Examples/BurgersPDE/BurgersDistributions.py5faea02f8eef767530db45ad2e6d710f436c88331553723875000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on Burgers 2019-03-27 17:57:55 -04005faea02f8eef767530db45ad2e6d710f436c8833working on BurgerseditTransportMaps/Distributions/Examples/BurgersPDE/BurgersDistributions.pyeditTransportMaps/Distributions/Examples/BurgersPDE/BurgersProblems.pyeditExamples/research/Burgers/solver_1d.pyExamples/research/Burgers/solver_1d.pyTransportMaps/Distributions/Examples/BurgersPDE/BurgersProblems.pyTransportMaps/DOLFIN/SolverBase.pyTransportMaps/Distributions/Examples/BurgersPDE/__init__.pyExamples/research/Burgers/GenerateDistribution.pyTransportMaps/Distributions/Examples/BurgersPDE/BurgersDistributions.py3448c58b848a08bbea34b656e19f1973cd1eb1c11553797066000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itgenerating distribution 2019-03-28 14:17:46 -04003448c58b848a08bbea34b656e19f1973cd1eb1c1generating distributioneditTransportMaps/Distributions/Examples/BurgersPDE/BurgersProblems.pyeditTransportMaps/DOLFIN/SolverBase.pyeditTransportMaps/Distributions/Examples/BurgersPDE/__init__.pyaddExamples/research/Burgers/GenerateDistribution.pyeditTransportMaps/Distributions/Examples/BurgersPDE/BurgersDistributions.pyeditExamples/research/Burgers/solver_1d.pyTransportMaps/Misc.pyTransportMaps/Distributions/FrozenDistributions.pyTransportMaps/Distributions/Examples/BurgersPDE/BurgersDistributions.pyExamples/research/Burgers/GenerateDistribution.pyTransportMaps/Maps/ListStackedMapBase.py4814147463abf4b192f9005bb418c352565f307b1553812525000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on burgers Laplace approximation 2019-03-28 18:35:25 -04004814147463abf4b192f9005bb418c352565f307bworking on burgers Laplace approximationeditTransportMaps/Distributions/Examples/BurgersPDE/BurgersDistributions.pyeditExamples/research/Burgers/GenerateDistribution.pyeditTransportMaps/Maps/ListStackedMapBase.pyeditTransportMaps/Misc.pyeditTransportMaps/Distributions/FrozenDistributions.pyTransportMaps/Functionals/LinearSpanApproximationBase.pyTransportMaps/Functionals/ParametricFunctionApproximationBase.pyTransportMaps/Functionals/MonotonicFunctionApproximations.pyTransportMaps/_version.py4a2c03976544e89eeff27b30b27c8d0e17aae1601554037468000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itfix committed for mpi with inverse from samples. The mpi_pool is not attached to objects anymore (so that it will be never serialized), but passed along with parameters 2019-03-31 09:04:28 -04004a2c03976544e89eeff27b30b27c8d0e17aae160fix committed for mpi with inverse from samples. The mpi_pool is not attached to objects anymore (so that it will be never serialized), but passed along with parameterseditTransportMaps/Functionals/MonotonicFunctionApproximations.pyeditTransportMaps/_version.pyeditTransportMaps/Functionals/ParametricFunctionApproximationBase.pyeditTransportMaps/Functionals/LinearSpanApproximationBase.pyTransportMaps/Maps/TransportMapBase.pyTransportMaps/Maps/TriangularTransportMapBase.pyTransportMaps/Maps/TriangularTransportMaps.pyb56131753e9b52e6a2cb2bff8fdff646598875761554052821000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itadditional fixes 2019-03-31 13:20:21 -0400b56131753e9b52e6a2cb2bff8fdff64659887576additional fixeseditTransportMaps/Maps/TransportMapBase.pyeditTransportMaps/Maps/TriangularTransportMaps.pyeditTransportMaps/Maps/TriangularTransportMapBase.pyTransportMaps/Distributions/Examples/BurgersPDE/BurgersProblems.pyExamples/research/Burgers/GenerateDistribution.py63c08f4c997e542d106254d5f60c0410de98e4e61554170556000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on Burgers 2019-04-01 22:02:36 -040063c08f4c997e542d106254d5f60c0410de98e4e6working on BurgerseditTransportMaps/Distributions/Examples/BurgersPDE/BurgersProblems.pyeditExamples/research/Burgers/GenerateDistribution.pyTransportMaps/Distributions/Examples/BurgersPDE/BurgersProblems.py9a275b6fdaa1d6ef55feca4502895e6691e1cb111554170578000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itadding Hessian 2019-04-01 22:02:58 -04009a275b6fdaa1d6ef55feca4502895e6691e1cb11adding HessianeditTransportMaps/Distributions/Examples/BurgersPDE/BurgersProblems.pyTransportMaps/Distributions/Examples/BurgersPDE/BurgersProblems.pyTransportMaps/LaplaceApproximationRoutines.pyExamples/research/Burgers/PlotPosteriorPredictive.pyscripts/tmap-laplaceTransportMaps/Distributions/Examples/BurgersPDE/BurgersDistributions.py86b6d61dce6c7d64933b83b6c8d7c661762495f91554351556000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itadded plotting of generated samples 2019-04-04 00:19:16 -040086b6d61dce6c7d64933b83b6c8d7c661762495f9added plotting of generated sampleseditTransportMaps/LaplaceApproximationRoutines.pyeditscripts/tmap-laplaceaddExamples/research/Burgers/PlotPosteriorPredictive.pyeditTransportMaps/Distributions/Examples/BurgersPDE/BurgersDistributions.pyeditTransportMaps/Distributions/Examples/BurgersPDE/BurgersProblems.pyTransportMaps/Maps/AffineTransportMapBase.pyTransportMaps/Diagnostics/Validators.pyTransportMaps/Maps/Defaults.pyTransportMaps/CLI/ConstructionScriptBase.pya3046091e3f5d31407db5922fa0705be0c6568311554512335000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on Burgers 2019-04-05 20:58:55 -0400a3046091e3f5d31407db5922fa0705be0c656831working on BurgerseditTransportMaps/Diagnostics/Validators.pyeditTransportMaps/Maps/AffineTransportMapBase.pyeditTransportMaps/Maps/Defaults.pyeditTransportMaps/CLI/ConstructionScriptBase.pyTransportMaps/Distributions/Examples/BurgersPDE/BurgersProblems.pyTransportMaps/Diagnostics/Validators.pyExamples/research/Burgers/GenerateDistribution.pyTransportMaps/CLI/ConstructionScriptBase.pyecd84fdc66c8f279797cf0b7624f6c63ae87493d1554606172000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itmodified gradboot stopping criterion 2019-04-06 23:02:52 -0400ecd84fdc66c8f279797cf0b7624f6c63ae87493dmodified gradboot stopping criterioneditTransportMaps/Distributions/Examples/BurgersPDE/BurgersProblems.pyeditExamples/research/Burgers/GenerateDistribution.pyeditTransportMaps/CLI/ConstructionScriptBase.pyeditTransportMaps/Diagnostics/Validators.pyTransportMaps/Distributions/Examples/BurgersPDE/BurgersProblems.pyExamples/research/Burgers/GenerateDistribution.pyTransportMaps/Distributions/Examples/BurgersPDE/BurgersDistributions.pyTransportMaps/Maps/ListStackedMapBase.pyTransportMaps/Likelihoods/LikelihoodBase.py157963c92a3f3f7a3ab95494239899e6cf165e0b1554722476000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itupdates... 2019-04-08 07:21:16 -0400157963c92a3f3f7a3ab95494239899e6cf165e0bupdates...editTransportMaps/Distributions/Examples/BurgersPDE/BurgersProblems.pyeditExamples/research/Burgers/GenerateDistribution.pyeditTransportMaps/Distributions/Examples/BurgersPDE/BurgersDistributions.pyeditTransportMaps/Maps/ListStackedMapBase.pyeditTransportMaps/Likelihoods/LikelihoodBase.pyTransportMaps/Maps/TriangularComponentwiseTransportMapBase.pyTransportMaps/Algorithms/Adaptivity/KullbackLeiblerAdaptivity.pyTransportMaps/Functionals/LinearSpanTensorizedParametricFunctionalBase.pyTransportMaps/Distributions/ConditionalDistributions.pyExamples/research/MonotoneTransport-paper/Burgers/PlotPosteriorPredictive.pyTransportMaps/Distributions/FrozenDistributions.pyTransportMaps/Maps/TriangularComponentwiseMapBase.pyTransportMaps/CLI/PostprocessBase.pyTransportMaps/Maps/ParametricTriangularComponentwiseMapBase.pyExamples/research/MonotoneTransport-paper/Banana/BananaPlots.pyTransportMaps/Maps/ParametricTriangularComponentwiseTransportMapBase.pyExamples/research/Burgers/PlotPosteriorPredictive.pyTransportMaps/CLI/ConstructionScriptBase.py94a9a9be9f6609b47146db86bc39b4698c66b9391555100233000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itfixed semilattice handling in adaptation and many other things.. 2019-04-12 16:17:13 -040094a9a9be9f6609b47146db86bc39b4698c66b939fixed semilattice handling in adaptation and many other things..editExamples/research/MonotoneTransport-paper/Banana/BananaPlots.pyaddExamples/research/MonotoneTransport-paper/Burgers/PlotPosteriorPredictive.pydeleteExamples/research/Burgers/PlotPosteriorPredictive.pyeditTransportMaps/Functionals/LinearSpanTensorizedParametricFunctionalBase.pyeditTransportMaps/Maps/TriangularComponentwiseTransportMapBase.pyeditTransportMaps/CLI/ConstructionScriptBase.pyeditTransportMaps/Maps/ParametricTriangularComponentwiseMapBase.pyeditTransportMaps/Distributions/FrozenDistributions.pyeditTransportMaps/Algorithms/Adaptivity/KullbackLeiblerAdaptivity.pyeditTransportMaps/Maps/TriangularComponentwiseMapBase.pyeditTransportMaps/CLI/PostprocessBase.pyeditTransportMaps/Distributions/ConditionalDistributions.pyeditTransportMaps/Maps/ParametricTriangularComponentwiseTransportMapBase.pyExamples/research/PoissonProblem/GaussianFieldDataGeneration.pya2e3ef9b6685d14e395a7297470d04450f8298e51555103609000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itadding TC setting for Poisson equation 2019-04-12 17:13:29 -0400a2e3ef9b6685d14e395a7297470d04450f8298e5adding TC setting for Poisson equationeditExamples/research/PoissonProblem/GaussianFieldDataGeneration.pyExamples/research/PoissonProblem/GaussianFieldDataGeneration.pyTransportMaps/Distributions/Examples/PoissonProblem/PoissonDistributions.pye19fb082e177a5a76f537b6abc890cde73c50b271555465879000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on Poisson 2019-04-16 21:51:19 -0400e19fb082e177a5a76f537b6abc890cde73c50b27working on PoissoneditExamples/research/PoissonProblem/GaussianFieldDataGeneration.pyeditTransportMaps/Distributions/Examples/PoissonProblem/PoissonDistributions.pyExamples/research/PoissonProblem/whiten.pyTransportMaps/Distributions/Examples/PoissonProblem/PoissonDistributions.pyTransportMaps/Distributions/Examples/PoissonProblem/PoissonProblems.pyExamples/research/PoissonProblem/GaussianFieldDataGeneration.py0fda949c24148e68496d621b8505b4d675d3f1bd1555465894000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.it... 2019-04-16 21:51:34 -04000fda949c24148e68496d621b8505b4d675d3f1bd...editTransportMaps/Distributions/Examples/PoissonProblem/PoissonDistributions.pyeditTransportMaps/Distributions/Examples/PoissonProblem/PoissonProblems.pyeditExamples/research/PoissonProblem/whiten.pyeditExamples/research/PoissonProblem/GaussianFieldDataGeneration.pyExamples/research/PoissonProblem/GaussianFieldDataGeneration.pyTransportMaps/Distributions/Examples/PoissonProblem/PoissonDistributions.py90cea188bf10305ec4fc58ae02b76db3e4ccf13c1555470811000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itadjoint of log-likelihood cost works... 2019-04-16 23:13:31 -040090cea188bf10305ec4fc58ae02b76db3e4ccf13cadjoint of log-likelihood cost works...editExamples/research/PoissonProblem/GaussianFieldDataGeneration.pyeditTransportMaps/Distributions/Examples/PoissonProblem/PoissonDistributions.pyExamples/research/PoissonProblem/GaussianFieldDataGeneration.pyTransportMaps/Distributions/Examples/PoissonProblem/PoissonDistributions.py96d6047e404c78b15a818622ad2787ae9dcdc5601555506988000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on Poisson generation 2019-04-17 09:16:28 -040096d6047e404c78b15a818622ad2787ae9dcdc560working on Poisson generationeditTransportMaps/Distributions/Examples/PoissonProblem/PoissonDistributions.pyeditExamples/research/PoissonProblem/GaussianFieldDataGeneration.pyTransportMaps/Functionals/LinearSpanTensorizedParametricFunctionalBase.pyTransportMaps/Functionals/AnchoredIntegratedSquaredParametricFunctionalBase.pyTransportMaps/Functionals/IntegratedSquaredParametricMonotoneFunctionalBase.pyTransportMaps/Functionals/FrozenMonotonicFunctions.pyTransportMaps/Functionals/PointwiseMonotoneLinearSpanTensorizedParametricFunctionalBase.pyTransportMaps/Functionals/IntegratedExponentialParametricMonotoneFunctionalBase.pyTransportMaps/Functionals/ProductDistributionParametricPullbackComponentFunctionBase.pyTransportMaps/Functionals/FunctionalBase.pybffbf303df407014df08171db355264c7f6d70fc1555508077000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on transforming Functionals into Maps 2019-04-17 09:34:37 -0400bffbf303df407014df08171db355264c7f6d70fcworking on transforming Functionals into MapseditTransportMaps/Functionals/FrozenMonotonicFunctions.pyeditTransportMaps/Functionals/IntegratedExponentialParametricMonotoneFunctionalBase.pyeditTransportMaps/Functionals/LinearSpanTensorizedParametricFunctionalBase.pyeditTransportMaps/Functionals/IntegratedSquaredParametricMonotoneFunctionalBase.pyeditTransportMaps/Functionals/ProductDistributionParametricPullbackComponentFunctionBase.pyeditTransportMaps/Functionals/FunctionalBase.pyeditTransportMaps/Functionals/AnchoredIntegratedSquaredParametricFunctionalBase.pyeditTransportMaps/Functionals/PointwiseMonotoneLinearSpanTensorizedParametricFunctionalBase.pyTransportMaps/Maps/Functionals/FrozenMonotonicFunctions.pyTransportMaps/Maps/Functionals/IntegratedExponentialParametricMonotoneFunctionalBase.pyTransportMaps/Maps/Functionals/ProductDistributionParametricPullbackComponentFunctionBase.pyTransportMaps/Maps/Functionals/PointwiseMonotoneLinearSpanTensorizedParametricFunctionalBase.pyTransportMaps/Functionals/AnchoredIntegratedSquaredParametricFunctionalBase.pyTransportMaps/Functionals/PointwiseMonotoneLinearSpanTensorizedParametricFunctionalBase.pyTransportMaps/Functionals/__init__.pyTransportMaps/Functionals/FunctionalBase.pyTransportMaps/Maps/Functionals/__init__.pyTransportMaps/Maps/Functionals/MonotoneFunctionalBase.pyTransportMaps/Functionals/ParametricMonotoneFunctionalBase.pyTransportMaps/Maps/Functionals/TensorizedParametricFunctionalBase.pyTransportMaps/Maps/Functionals/ParametricFunctionalBase.pyTransportMaps/Functionals/IntegratedExponentialParametricMonotoneFunctionalBase.pyTransportMaps/Maps/Functionals/IntegratedSquaredParametricMonotoneFunctionalBase.pyTransportMaps/Functionals/LinearSpanTensorizedParametricFunctionalBase.pyTransportMaps/Functionals/ParametricFunctionalBase.pyTransportMaps/Functionals/IntegratedSquaredParametricMonotoneFunctionalBase.pyTransportMaps/Maps/Functionals/FunctionalBase.pyTransportMaps/Maps/Functionals/AnchoredIntegratedSquaredParametricFunctionalBase.pyTransportMaps/Functionals/FrozenMonotonicFunctions.pyTransportMaps/Functionals/TensorizedParametricFunctionalBase.pyTransportMaps/Functionals/ProductDistributionParametricPullbackComponentFunctionBase.pyTransportMaps/Functionals/MonotoneFunctionalBase.pyTransportMaps/Maps/Functionals/ParametricMonotoneFunctionalBase.pyTransportMaps/Maps/Functionals/LinearSpanTensorizedParametricFunctionalBase.py37a56363c857b83cef28c2212a0f83df5c66c4481555508235000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itmoving Functionals into Maps 2019-04-17 09:37:15 -040037a56363c857b83cef28c2212a0f83df5c66c448moving Functionals into MapsdeleteTransportMaps/Functionals/ParametricMonotoneFunctionalBase.pyaddTransportMaps/Maps/Functionals/AnchoredIntegratedSquaredParametricFunctionalBase.pydeleteTransportMaps/Functionals/LinearSpanTensorizedParametricFunctionalBase.pydeleteTransportMaps/Functionals/TensorizedParametricFunctionalBase.pyaddTransportMaps/Maps/Functionals/__init__.pyaddTransportMaps/Maps/Functionals/IntegratedSquaredParametricMonotoneFunctionalBase.pyaddTransportMaps/Maps/Functionals/ProductDistributionParametricPullbackComponentFunctionBase.pyaddTransportMaps/Maps/Functionals/ParametricFunctionalBase.pydeleteTransportMaps/Functionals/FunctionalBase.pyaddTransportMaps/Maps/Functionals/MonotoneFunctionalBase.pyaddTransportMaps/Maps/Functionals/LinearSpanTensorizedParametricFunctionalBase.pydeleteTransportMaps/Functionals/__init__.pyaddTransportMaps/Maps/Functionals/IntegratedExponentialParametricMonotoneFunctionalBase.pydeleteTransportMaps/Functionals/MonotoneFunctionalBase.pydeleteTransportMaps/Functionals/FrozenMonotonicFunctions.pyaddTransportMaps/Maps/Functionals/PointwiseMonotoneLinearSpanTensorizedParametricFunctionalBase.pydeleteTransportMaps/Functionals/PointwiseMonotoneLinearSpanTensorizedParametricFunctionalBase.pyaddTransportMaps/Maps/Functionals/TensorizedParametricFunctionalBase.pydeleteTransportMaps/Functionals/ParametricFunctionalBase.pyaddTransportMaps/Maps/Functionals/FrozenMonotonicFunctions.pydeleteTransportMaps/Functionals/ProductDistributionParametricPullbackComponentFunctionBase.pydeleteTransportMaps/Functionals/AnchoredIntegratedSquaredParametricFunctionalBase.pyaddTransportMaps/Maps/Functionals/FunctionalBase.pydeleteTransportMaps/Functionals/IntegratedExponentialParametricMonotoneFunctionalBase.pydeleteTransportMaps/Functionals/IntegratedSquaredParametricMonotoneFunctionalBase.pyaddTransportMaps/Maps/Functionals/ParametricMonotoneFunctionalBase.pyDocs/source/Figures/working/taxonomy/taxonomy.tex05f43a71a569c26c5edffacb50782cbf14b94f241555509747000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itupdated taxonomy... needs to reflect the fact that Functionals is a submodule of Maps 2019-04-17 10:02:27 -040005f43a71a569c26c5edffacb50782cbf14b94f24updated taxonomy... needs to reflect the fact that Functionals is a submodule of MapseditDocs/source/Figures/working/taxonomy/taxonomy.texDocs/source/Figures/working/taxonomy/taxonomy.texea258a55d3207542badfeadbb0d97c37b51a4a9e1555510931000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itfixed taxonomy 2019-04-17 10:22:11 -0400ea258a55d3207542badfeadbb0d97c37b51a4a9efixed taxonomyeditDocs/source/Figures/working/taxonomy/taxonomy.texTransportMaps/tests/test_transportmaps.pyTransportMaps/Algorithms/Adaptivity/KullbackLeiblerAdaptivity.pyTransportMaps/tests/test_transportmap_distributions_sampling.pyTransportMaps/__init__.pyTransportMaps/Maps/Functionals/PointwiseMonotoneLinearSpanTensorizedParametricFunctionalBase.pyTransportMaps/Maps/__init__.pyTransportMaps/Maps/TransportMapBase.pyTransportMaps/Maps/ComponentwiseTransportMapBase.pyTransportMaps/Maps/LinearSpanParametricTriangularComponentwiseMapBase.pyTransportMaps/Maps/ParametricComponentwiseMapBase.pyTransportMaps/Maps/Functionals/ParametricFunctionalBase.pyTransportMaps/Maps/ParametricTriangularComponentwiseTransportMapBase.pyTransportMaps/Distributions/Examples/StochasticVolatility/StocVolHyperDistributions.pyTransportMaps/Maps/TriangularComponentwiseTransportMapBase.pyTransportMaps/Maps/DiagonalIsotropicTransportMapBase.pyTransportMaps/Maps/IntegratedExponentialParametricTriangularComponentwiseTransportMapBase.pyTransportMaps/Maps/Functionals/AnchoredIntegratedSquaredParametricFunctionalBase.pyTransportMaps/tests/test_transportmap_distributions.pyTransportMaps/Maps/IntegratedSquaredParametricTriangularComponentwiseTransportMapBase.pyTransportMaps/Maps/ComponentwiseMapBase.pyTransportMaps/Likelihoods/LikelihoodBase.pyTransportMaps/tests/test_kl_divergence.pyTransportMaps/tests/TestFunctions.pyTransportMaps/Maps/DiagonalComponentwiseTransportMapBase.pyTransportMaps/tests/test_L2_misfit.pyTransportMaps/Maps/Defaults.pyTransportMaps/Maps/FrozenTriangularTransportMaps.pyTransportMaps/Defaults.pyTransportMaps/Maps/ParametricTransportMapBase.pyTransportMaps/tests/test_functions.pyTransportMaps/Maps/NonMonotoneLinearSpanParametricTriangularComponentwiseTransportMapBase.py7c17a6589eaade8c06307c06c363d7300009f5981555510985000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itfixing unit tests 2019-04-17 10:23:05 -04007c17a6589eaade8c06307c06c363d7300009f598fixing unit testseditTransportMaps/Maps/ParametricComponentwiseMapBase.pyeditTransportMaps/Maps/DiagonalIsotropicTransportMapBase.pyeditTransportMaps/Maps/LinearSpanParametricTriangularComponentwiseMapBase.pyeditTransportMaps/Maps/Functionals/ParametricFunctionalBase.pyeditTransportMaps/tests/test_transportmap_distributions.pyeditTransportMaps/tests/TestFunctions.pyeditTransportMaps/tests/test_transportmaps.pyeditTransportMaps/tests/test_transportmap_distributions_sampling.pyeditTransportMaps/Maps/FrozenTriangularTransportMaps.pyeditTransportMaps/Defaults.pyeditTransportMaps/__init__.pyeditTransportMaps/Maps/ComponentwiseTransportMapBase.pyeditTransportMaps/Algorithms/Adaptivity/KullbackLeiblerAdaptivity.pyeditTransportMaps/Maps/Functionals/PointwiseMonotoneLinearSpanTensorizedParametricFunctionalBase.pyeditTransportMaps/Maps/NonMonotoneLinearSpanParametricTriangularComponentwiseTransportMapBase.pyeditTransportMaps/Maps/TriangularComponentwiseTransportMapBase.pyeditTransportMaps/Maps/TransportMapBase.pyeditTransportMaps/Distributions/Examples/StochasticVolatility/StocVolHyperDistributions.pyeditTransportMaps/Maps/Functionals/AnchoredIntegratedSquaredParametricFunctionalBase.pyeditTransportMaps/Maps/DiagonalComponentwiseTransportMapBase.pyeditTransportMaps/Maps/ParametricTransportMapBase.pyeditTransportMaps/Maps/IntegratedSquaredParametricTriangularComponentwiseTransportMapBase.pyeditTransportMaps/tests/test_functions.pyeditTransportMaps/Maps/ParametricTriangularComponentwiseTransportMapBase.pyeditTransportMaps/tests/test_kl_divergence.pyeditTransportMaps/Likelihoods/LikelihoodBase.pyeditTransportMaps/Maps/ComponentwiseMapBase.pyeditTransportMaps/Maps/Defaults.pyeditTransportMaps/Maps/__init__.pyeditTransportMaps/tests/test_L2_misfit.pyeditTransportMaps/Maps/IntegratedExponentialParametricTriangularComponentwiseTransportMapBase.pyTransportMaps/Functionals/__init__.pyTransportMaps/__init__.py7a38d6b2ec10a4c645f9100118ed54e9d728dff61555511425000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itadded deprecation message if importing TransportMaps.Functionals 2019-04-17 10:30:25 -04007a38d6b2ec10a4c645f9100118ed54e9d728dff6added deprecation message if importing TransportMaps.FunctionalseditTransportMaps/__init__.pyaddTransportMaps/Functionals/__init__.pyTransportMaps/Algorithms/SequentialInference/SequentialInferenceBase.pyTransportMaps/Distributions/Inference/InferenceBase.pyTransportMaps/Distributions/Decomposable/SequentialInferenceDistributions.py5d286d364429c419da5a0422585f5fa5bb1df2851555511673000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on unittests and fixed some docs 2019-04-17 10:34:33 -04005d286d364429c419da5a0422585f5fa5bb1df285working on unittests and fixed some docseditTransportMaps/Distributions/Inference/InferenceBase.pyeditTransportMaps/Algorithms/SequentialInference/SequentialInferenceBase.pyeditTransportMaps/Distributions/Decomposable/SequentialInferenceDistributions.pyTransportMaps/__init__.py1b482fc2dbf6f1ddfcafa20c7f124ae4b2a2452a1555512375000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itfixed dependencies 2019-04-17 10:46:15 -04001b482fc2dbf6f1ddfcafa20c7f124ae4b2a2452afixed dependencieseditTransportMaps/__init__.pyTransportMaps/Maps/LinearSpanParametricTriangularComponentwiseMapBase.pyTransportMaps/LaplaceApproximationRoutines.pyTransportMaps/Distributions/Examples/StochasticVolatility/StocVolHyperDistributions.pyTransportMaps/Distributions/Decomposable/SequentialInferenceDistributions.pyTransportMaps/Likelihoods/LikelihoodBase.py8c0671aff63bf31022320d9b76854a966334285b1555515685000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itpassing unit tests 2019-04-17 11:41:25 -04008c0671aff63bf31022320d9b76854a966334285bpassing unit testseditTransportMaps/Distributions/Decomposable/SequentialInferenceDistributions.pyeditTransportMaps/Likelihoods/LikelihoodBase.pyeditTransportMaps/LaplaceApproximationRoutines.pyeditTransportMaps/Maps/LinearSpanParametricTriangularComponentwiseMapBase.pyeditTransportMaps/Distributions/Examples/StochasticVolatility/StocVolHyperDistributions.pyExamples/research/PoissonProblem/speed.py0e9bd73ff8a79d2c45c971c167f801f822014e5d1555516815000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itadded speed test for Poisson 2019-04-17 12:00:15 -04000e9bd73ff8a79d2c45c971c167f801f822014e5dadded speed test for PoissonaddExamples/research/PoissonProblem/speed.pyExamples/research/PoissonProblem/whiten.pyExamples/research/PoissonProblem/GaussianFieldDataGeneration.pyTransportMaps/Distributions/Examples/PoissonProblem/PoissonDistributions.pydc7aae4163ebf083d5b05452f33c362ac238d1b01555516933000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on Poisson 2019-04-17 12:02:13 -0400dc7aae4163ebf083d5b05452f33c362ac238d1b0working on PoissoneditExamples/research/PoissonProblem/whiten.pyeditExamples/research/PoissonProblem/GaussianFieldDataGeneration.pyeditTransportMaps/Distributions/Examples/PoissonProblem/PoissonDistributions.pyTransportMaps/Distributions/Examples/PoissonProblem/PoissonDistributions.pyExamples/research/PoissonProblem/GaussianFieldDataGeneration.pyTransportMaps/Maps/ListCompositeMapBase.pyTransportMaps/Maps/FrozenTriangularTransportMaps.pyExamples/research/PoissonProblem/speed.pyTransportMaps/Distributions/Examples/PoissonProblem/PoissonProblems.pyTransportMaps/Maps/MapBase.pyb706e6219e3f0dfd8e901d5e886e9cbb3559252b1555533910000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on Poisson. Introduced action_grad_x in order to speed up in certain cases 2019-04-17 16:45:10 -0400b706e6219e3f0dfd8e901d5e886e9cbb3559252bworking on Poisson. Introduced action_grad_x in order to speed up in certain caseseditExamples/research/PoissonProblem/speed.pyeditTransportMaps/Distributions/Examples/PoissonProblem/PoissonProblems.pyeditTransportMaps/Maps/MapBase.pyeditExamples/research/PoissonProblem/GaussianFieldDataGeneration.pyeditTransportMaps/Distributions/Examples/PoissonProblem/PoissonDistributions.pyeditTransportMaps/Maps/FrozenTriangularTransportMaps.pyeditTransportMaps/Maps/ListCompositeMapBase.pyTransportMaps/Maps/TriangularComponentwiseTransportMapBase.pyTransportMaps/Maps/Functionals/IntegratedExponentialParametricMonotoneFunctionalBase.pyTransportMaps/Maps/Functionals/FunctionalBase.pyTransportMaps/Maps/Functionals/AnchoredIntegratedSquaredParametricFunctionalBase.pyTransportMaps/Maps/ParametricTriangularComponentwiseTransportMapBase.pyTransportMaps/Maps/ParametricComponentwiseMapBase.pyTransportMaps/Maps/Functionals/ParametricFunctionalBase.pyTransportMaps/Maps/ComponentwiseMapBase.pyTransportMaps/Maps/Functionals/IntegratedSquaredParametricMonotoneFunctionalBase.pyTransportMaps/Maps/Functionals/LinearSpanTensorizedParametricFunctionalBase.pyac502df4350dfde4e28c7739b80ac4dcb8a296341555538239000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itmaking Functionals into maps with output in one dimension. This will allow the use of all the machinery available for maps (composition etc) also for functionals... 2019-04-17 17:57:19 -0400ac502df4350dfde4e28c7739b80ac4dcb8a29634making Functionals into maps with output in one dimension. This will allow the use of all the machinery available for maps (composition etc) also for functionals...editTransportMaps/Maps/Functionals/FunctionalBase.pyeditTransportMaps/Maps/Functionals/IntegratedExponentialParametricMonotoneFunctionalBase.pyeditTransportMaps/Maps/ParametricTriangularComponentwiseTransportMapBase.pyeditTransportMaps/Maps/ParametricComponentwiseMapBase.pyeditTransportMaps/Maps/ComponentwiseMapBase.pyeditTransportMaps/Maps/Functionals/AnchoredIntegratedSquaredParametricFunctionalBase.pyeditTransportMaps/Maps/Functionals/IntegratedSquaredParametricMonotoneFunctionalBase.pyeditTransportMaps/Maps/Functionals/LinearSpanTensorizedParametricFunctionalBase.pyeditTransportMaps/Maps/TriangularComponentwiseTransportMapBase.pyeditTransportMaps/Maps/Functionals/ParametricFunctionalBase.pyTransportMaps/Maps/TriangularComponentwiseTransportMapBase.pyTransportMaps/Maps/Functionals/AnchoredIntegratedSquaredParametricFunctionalBase.pyTransportMaps/Maps/Functionals/IntegratedExponentialParametricMonotoneFunctionalBase.pyTransportMaps/Maps/Functionals/IntegratedSquaredParametricMonotoneFunctionalBase.py52c7d424a406606eff205f61b4db8c93691c930d1555539500000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on unit tests... 2019-04-17 18:18:20 -040052c7d424a406606eff205f61b4db8c93691c930dworking on unit tests...editTransportMaps/Maps/Functionals/IntegratedSquaredParametricMonotoneFunctionalBase.pyeditTransportMaps/Maps/TriangularComponentwiseTransportMapBase.pyeditTransportMaps/Maps/Functionals/IntegratedExponentialParametricMonotoneFunctionalBase.pyeditTransportMaps/Maps/Functionals/AnchoredIntegratedSquaredParametricFunctionalBase.pyDocs/source/Figures/working/taxonomy/taxonomy.texa62f13391c59c6b80277cc81f5bc2cc2319d4ed91555551115000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itadded title to taxonomy 2019-04-17 21:31:55 -0400a62f13391c59c6b80277cc81f5bc2cc2319d4ed9added title to taxonomyeditDocs/source/Figures/working/taxonomy/taxonomy.texTransportMaps/Maps/Functionals/FrozenMonotonicFunctions.pyTransportMaps/Maps/Functionals/IntegratedExponentialParametricMonotoneFunctionalBase.pyTransportMaps/LaplaceApproximationRoutines.pyTransportMaps/Maps/Functionals/PointwiseMonotoneLinearSpanTensorizedParametricFunctionalBase.pyTransportMaps/Maps/Functionals/ProductDistributionParametricPullbackComponentFunctionBase.pyTransportMaps/Maps/Functionals/AnchoredIntegratedSquaredParametricFunctionalBase.pyTransportMaps/tests/test_transportmap_distributions.pyTransportMaps/Routines.pyTransportMaps/Likelihoods/LikelihoodBase.pyTransportMaps/tests/test_kl_divergence.pyTransportMaps/Distributions/Decomposable/SequentialInferenceDistributions.pyTransportMaps/tests/test_functions.pyTransportMaps/Distributions/Inference/InferenceBase.pyTransportMaps/Distributions/Examples/StochasticVolatility/StocVolHyperDistributions.pyTransportMaps/Maps/Functionals/IntegratedSquaredParametricMonotoneFunctionalBase.pyTransportMaps/Maps/Functionals/LinearSpanTensorizedParametricFunctionalBase.pyeb3e3cb3fa759e2ca3885e9ba891abb35072505b1555599626000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itall tests pass 2019-04-18 11:00:26 -0400eb3e3cb3fa759e2ca3885e9ba891abb35072505ball tests passeditTransportMaps/Routines.pyeditTransportMaps/Maps/Functionals/PointwiseMonotoneLinearSpanTensorizedParametricFunctionalBase.pyeditTransportMaps/Maps/Functionals/IntegratedSquaredParametricMonotoneFunctionalBase.pyeditTransportMaps/Maps/Functionals/ProductDistributionParametricPullbackComponentFunctionBase.pyeditTransportMaps/tests/test_functions.pyeditTransportMaps/Maps/Functionals/FrozenMonotonicFunctions.pyeditTransportMaps/Maps/Functionals/AnchoredIntegratedSquaredParametricFunctionalBase.pyeditTransportMaps/Maps/Functionals/IntegratedExponentialParametricMonotoneFunctionalBase.pyeditTransportMaps/Distributions/Decomposable/SequentialInferenceDistributions.pyeditTransportMaps/Maps/Functionals/LinearSpanTensorizedParametricFunctionalBase.pyeditTransportMaps/tests/test_transportmap_distributions.pyeditTransportMaps/tests/test_kl_divergence.pyeditTransportMaps/Distributions/Inference/InferenceBase.pyeditTransportMaps/Distributions/Examples/StochasticVolatility/StocVolHyperDistributions.pyeditTransportMaps/Likelihoods/LikelihoodBase.pyeditTransportMaps/LaplaceApproximationRoutines.pyDocs/source/Figures/working/taxonomy/taxonomy.texExamples/research/PoissonProblem/whiten.pyTransportMaps/Distributions/Examples/PoissonProblem/PoissonDistributions.pyTransportMaps/tests/test_transportmap_distributions_sampling.pyTransportMaps/LaplaceApproximationRoutines.py598c6497cc677d32b86af2152fb6339f1ba59feb1555606420000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itfixed merge with Functionals->Maps. Working on Poisson. Fixed taxonomy. 2019-04-18 12:53:40 -0400598c6497cc677d32b86af2152fb6339f1ba59febfixed merge with Functionals->Maps. Working on Poisson. Fixed taxonomy.editTransportMaps/Distributions/Examples/PoissonProblem/PoissonDistributions.pyeditTransportMaps/LaplaceApproximationRoutines.pyeditTransportMaps/tests/test_transportmap_distributions_sampling.pyeditDocs/source/Figures/working/taxonomy/taxonomy.texeditExamples/research/PoissonProblem/whiten.pyTransportMaps/Samplers/IndependentSamplers.pyTransportMaps/Distributions/FrozenDistributions.pyTransportMaps/Distributions/Examples/PoissonProblem/PoissonProblems.pydb5320ece9161843c89170e412869ccfdca85f311555703207000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itRejectionSampler + multi dim uniform 2019-04-19 15:46:47 -0400db5320ece9161843c89170e412869ccfdca85f31RejectionSampler + multi dim uniformeditTransportMaps/Distributions/FrozenDistributions.pyeditTransportMaps/Distributions/Examples/PoissonProblem/PoissonProblems.pyeditTransportMaps/Samplers/IndependentSamplers.pyTransportMaps/Maps/TriangularComponentwiseTransportMapBase.pyTransportMaps/Algorithms/Adaptivity/KullbackLeiblerAdaptivity.pyExamples/research/PoissonProblem/whiten.pyExamples/research/MonotoneTransport-paper/Poisson/postprocess-tc.pyTransportMaps/Distributions/Examples/PoissonProblem/PoissonDistributions.pyTransportMaps/Diagnostics/Validators.pyTransportMaps/Samplers/MarkovChainSamplers.pyTransportMaps/Maps/TriangularComponentwiseMapBase.pyExamples/research/PoissonProblem/GaussianFieldDataGeneration.pyTransportMaps/Distributions/FrozenDistributions.pyTransportMaps/Distributions/DistributionBase.pyTransportMaps/CLI/PostprocessBase.pyTransportMaps/Maps/__init__.pysetup.pyTransportMaps/CLI/AdaptivityPostprocessBase.pyTransportMaps/Samplers/IndependentSamplers.pyTransportMaps/Distributions/Examples/PoissonProblem/PoissonProblems.pyTransportMaps/Distributions/Inference/InferenceBase.pyTransportMaps/Maps/Functionals/LinearSpanTensorizedParametricFunctionalBase.pyae24e6e807a2c4e304067bbf6bd730b0d0065fb51556145454000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on poisson 2019-04-24 18:37:34 -0400ae24e6e807a2c4e304067bbf6bd730b0d0065fb5working on poissoneditTransportMaps/CLI/PostprocessBase.pyeditTransportMaps/Samplers/MarkovChainSamplers.pyeditTransportMaps/Distributions/Inference/InferenceBase.pyeditTransportMaps/Distributions/Examples/PoissonProblem/PoissonDistributions.pyeditTransportMaps/Distributions/Examples/PoissonProblem/PoissonProblems.pyeditTransportMaps/Maps/TriangularComponentwiseMapBase.pyeditTransportMaps/Diagnostics/Validators.pyeditTransportMaps/Maps/TriangularComponentwiseTransportMapBase.pyeditTransportMaps/Maps/__init__.pyeditsetup.pyeditTransportMaps/Samplers/IndependentSamplers.pyeditTransportMaps/Maps/Functionals/LinearSpanTensorizedParametricFunctionalBase.pyeditExamples/research/PoissonProblem/GaussianFieldDataGeneration.pyeditTransportMaps/CLI/AdaptivityPostprocessBase.pyeditTransportMaps/Algorithms/Adaptivity/KullbackLeiblerAdaptivity.pyeditExamples/research/PoissonProblem/whiten.pyaddExamples/research/MonotoneTransport-paper/Poisson/postprocess-tc.pyeditTransportMaps/Distributions/FrozenDistributions.pyeditTransportMaps/Distributions/DistributionBase.pyTransportMaps/Diagnostics/Validators.pyTransportMaps/Samplers/IndependentSamplers.pyTransportMaps/Samplers/MarkovChainSamplers.pyscripts/tmap-laplaceTransportMaps/CLI/PostprocessBase.pyTransportMaps/Distributions/Examples/PoissonProblem/PoissonProblems.pyExamples/research/MonotoneTransport-paper/Poisson/subspace-reduction.pyTransportMaps/CLI/ConstructionScriptBase.py65ae46f512d64249170c53f624a597dca2f3c3d81556497034000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on dimension reduction... 2019-04-28 20:17:14 -040065ae46f512d64249170c53f624a597dca2f3c3d8working on dimension reduction...editTransportMaps/Samplers/IndependentSamplers.pyeditTransportMaps/CLI/ConstructionScriptBase.pyeditTransportMaps/CLI/PostprocessBase.pyeditscripts/tmap-laplaceeditTransportMaps/Diagnostics/Validators.pyeditTransportMaps/Samplers/MarkovChainSamplers.pyaddExamples/research/MonotoneTransport-paper/Poisson/subspace-reduction.pyeditTransportMaps/Distributions/Examples/PoissonProblem/PoissonProblems.pyTransportMaps/Algorithms/Adaptivity/KullbackLeiblerAdaptivity.pyExamples/research/MonotoneTransport-paper/Poisson/postprocess-tc.pyscripts/tmap-adaptivity-postprocessTransportMaps/Diagnostics/Validators.pyTransportMaps/Builders/BuilderBase.pyTransportMaps/Distributions/Examples/PoissonProblem/PoissonDistributions.pyTransportMaps/Maps/ListCompositeTransportMapBase.pyTransportMaps/Distributions/FrozenDistributions.pyTransportMaps/CLI/PostprocessBase.pyscripts/tmap-postprocessTransportMaps/Routines.pyTransportMaps/CLI/AdaptivityPostprocessBase.pyTransportMaps/Maps/ListCompositeMapBase.pyExamples/research/MonotoneTransport-paper/Banana/BananaPlots.pyTransportMaps/Maps/ParametricTriangularComponentwiseTransportMapBase.pyTransportMaps/Distributions/Examples/PoissonProblem/PoissonProblems.pyExamples/research/MonotoneTransport-paper/Poisson/subspace-reduction.pyTransportMaps/Maps/ListStackedMapBase.pyTransportMaps/CLI/ConstructionScriptBase.pyad10bf8970bf716af5bcaf2bc8f031aeeb3c1b081556910946000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on poisson 2019-05-03 15:15:46 -0400ad10bf8970bf716af5bcaf2bc8f031aeeb3c1b08working on poissoneditTransportMaps/Maps/ListStackedMapBase.pyeditTransportMaps/Maps/ParametricTriangularComponentwiseTransportMapBase.pyeditExamples/research/MonotoneTransport-paper/Poisson/postprocess-tc.pyeditExamples/research/MonotoneTransport-paper/Poisson/subspace-reduction.pyeditTransportMaps/CLI/AdaptivityPostprocessBase.pyeditTransportMaps/Distributions/FrozenDistributions.pyeditTransportMaps/Diagnostics/Validators.pyeditExamples/research/MonotoneTransport-paper/Banana/BananaPlots.pyeditscripts/tmap-postprocesseditTransportMaps/Builders/BuilderBase.pyeditTransportMaps/Distributions/Examples/PoissonProblem/PoissonProblems.pyeditTransportMaps/Maps/ListCompositeMapBase.pyeditTransportMaps/Routines.pyeditTransportMaps/Maps/ListCompositeTransportMapBase.pyeditTransportMaps/CLI/PostprocessBase.pyeditTransportMaps/CLI/ConstructionScriptBase.pyeditTransportMaps/Distributions/Examples/PoissonProblem/PoissonDistributions.pyeditscripts/tmap-adaptivity-postprocesseditTransportMaps/Algorithms/Adaptivity/KullbackLeiblerAdaptivity.pyTransportMaps/Distributions/Examples/__init__.pyExamples/research/cantilever-timoshenko/solver.pyTransportMaps/Distributions/Examples/Timoshenko/__init__.pyTransportMaps/Distributions/Examples/Timoshenko/TimoshenkoProblems.pyeb0d5ef4c7577d4228c417769af1942ced84891d1557173314000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on Cantilever 2019-05-06 16:08:34 -0400eb0d5ef4c7577d4228c417769af1942ced84891dworking on CantileveraddExamples/research/cantilever-timoshenko/solver.pyaddTransportMaps/Distributions/Examples/Timoshenko/__init__.pyaddTransportMaps/Distributions/Examples/Timoshenko/TimoshenkoProblems.pyeditTransportMaps/Distributions/Examples/__init__.pyTransportMaps/Maps/MiscMaps.pyExamples/research/MonotoneTransport-paper/Poisson/postprocess-tc.py04dcd2922d72ffdb4a646935cd5647587dbd3e0d1557173472000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itadding missing file 2019-05-06 16:11:12 -040004dcd2922d72ffdb4a646935cd5647587dbd3e0dadding missing fileeditExamples/research/MonotoneTransport-paper/Poisson/postprocess-tc.pyaddTransportMaps/Maps/MiscMaps.pyExamples/research/cantilever-timoshenko/script.pyTransportMaps/DOLFIN/SolverBase.pyExamples/research/cantilever-timoshenko/solver.pyTransportMaps/Distributions/Examples/Timoshenko/TimoshenkoProblems.pybe812d7ecb45c80f03eacdf34d668821e060416c1557253077000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on timoshenko 2019-05-07 14:17:57 -0400be812d7ecb45c80f03eacdf34d668821e060416cworking on timoshenkoeditTransportMaps/DOLFIN/SolverBase.pyaddExamples/research/cantilever-timoshenko/script.pyeditExamples/research/cantilever-timoshenko/solver.pyeditTransportMaps/Distributions/Examples/Timoshenko/TimoshenkoProblems.pyExamples/research/LazyMaps/banana/banana.pya8e3822afb15de82e7298c2d173250059f381f481557256981000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on banana 2019-05-07 15:23:01 -0400a8e3822afb15de82e7298c2d173250059f381f48working on bananaeditExamples/research/LazyMaps/banana/banana.pyTransportMaps/Maps/IdentityParametricTriangularComponentwiseTransportMapBase.pyTransportMaps/Maps/Functionals/IdentityParametricMonotoneFunctionalBase.pyTransportMaps/Maps/ListStackedParametricMapBase.pyTransportMaps/Maps/TriangularListStackedTransportMapBase.pyTransportMaps/Maps/__init__.pyTransportMaps/Maps/ListStackedParametricTransportMapBase.pyTransportMaps/Maps/IntegratedSquaredParametricTriangularComponentwiseTransportMapBase.pyTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapFactories.pyTransportMaps/Maps/Functionals/__init__.pyTransportMaps/Maps/ListStackedMapBase.pyTransportMaps/Maps/TriangularListStackedParametricTransportMapBase.pya2010fb16d5ed4b10ce0b239ee130985cc5de4ee1557281227000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on lazy with identity tails 2019-05-07 22:07:07 -0400a2010fb16d5ed4b10ce0b239ee130985cc5de4eeworking on lazy with identity tailsaddTransportMaps/Maps/Functionals/IdentityParametricMonotoneFunctionalBase.pyaddTransportMaps/Maps/IdentityParametricTriangularComponentwiseTransportMapBase.pyeditTransportMaps/Maps/Functionals/__init__.pyaddTransportMaps/Maps/ListStackedParametricMapBase.pyeditTransportMaps/Maps/__init__.pyeditTransportMaps/Maps/ListStackedMapBase.pyeditTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapFactories.pyeditTransportMaps/Maps/IntegratedSquaredParametricTriangularComponentwiseTransportMapBase.pyeditTransportMaps/Maps/TriangularListStackedTransportMapBase.pyaddTransportMaps/Maps/ListStackedParametricTransportMapBase.pyaddTransportMaps/Maps/TriangularListStackedParametricTransportMapBase.pyTransportMaps/Distributions/Examples/BiochemicalOxygenDemand/BODDistributions.pyTransportMaps/Distributions/ConditionalDistributions.pyTransportMaps/CLI/DeepLazyMapsConstructionScriptBase.pyTransportMaps/__init__.pyTransportMaps/Distributions/FrozenDistributions.pyTransportMaps/LinAlg/__init__.pyTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapFactories.pyTransportMaps/LinAlg/_linalg.py905d032ad0573e32b2184f3b6d5bde89f1b45b041557345661000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itlazy maps have now an identity tail 2019-05-08 16:01:01 -0400905d032ad0573e32b2184f3b6d5bde89f1b45b04lazy maps have now an identity taileditTransportMaps/Distributions/FrozenDistributions.pyaddTransportMaps/LinAlg/__init__.pyeditTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapFactories.pyeditTransportMaps/CLI/DeepLazyMapsConstructionScriptBase.pyeditTransportMaps/Distributions/Examples/BiochemicalOxygenDemand/BODDistributions.pyaddTransportMaps/LinAlg/_linalg.pyeditTransportMaps/Distributions/ConditionalDistributions.pyeditTransportMaps/__init__.pyExamples/research/cantilever-timoshenko/solver.pyTransportMaps/Distributions/Examples/Timoshenko/TimoshenkoDistributions.pyTransportMaps/Distributions/Examples/Timoshenko/TimoshenkoProblems.py51f9747d541d59a484d6e3f3808bb7fc9900f3901557350914000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on timoshenko 2019-05-08 17:28:34 -040051f9747d541d59a484d6e3f3808bb7fc9900f390working on timoshenkoaddTransportMaps/Distributions/Examples/Timoshenko/TimoshenkoDistributions.pyeditExamples/research/cantilever-timoshenko/solver.pyeditTransportMaps/Distributions/Examples/Timoshenko/TimoshenkoProblems.pyExamples/research/cantilever-timoshenko/GaussianFieldDataGeneration.pyTransportMaps/Distributions/Examples/Timoshenko/TimoshenkoProblems.pyTransportMaps/Distributions/Examples/Timoshenko/TimoshenkoDistributions.py847d04bd01da4179654bb56e87353e7c3e61a11d1557368329000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on the generation of the target distribution 2019-05-08 22:18:49 -0400847d04bd01da4179654bb56e87353e7c3e61a11dworking on the generation of the target distributioneditTransportMaps/Distributions/Examples/Timoshenko/TimoshenkoProblems.pyaddExamples/research/cantilever-timoshenko/GaussianFieldDataGeneration.pyeditTransportMaps/Distributions/Examples/Timoshenko/TimoshenkoDistributions.pyExamples/research/cantilever-timoshenko/solver.pyExamples/research/cantilever-timoshenko/GaussianFieldDataGeneration.pyTransportMaps/Distributions/Examples/Timoshenko/TimoshenkoProblems.pyb58c3b5b6d2a2a4406d6059c4ab9e616f6f8a2331557401644000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on Timoshenko distribution 2019-05-09 07:34:04 -0400b58c3b5b6d2a2a4406d6059c4ab9e616f6f8a233working on Timoshenko distributioneditTransportMaps/Distributions/Examples/Timoshenko/TimoshenkoProblems.pyeditExamples/research/cantilever-timoshenko/solver.pyeditExamples/research/cantilever-timoshenko/GaussianFieldDataGeneration.pyTransportMaps/Samplers/puwr.pyTransportMaps/Samplers/Routines.py780198a281b4c007b7c1e7b11d876659a463ec2b1557426333000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itadded puwr ess routine :) 2019-05-09 14:25:33 -0400780198a281b4c007b7c1e7b11d876659a463ec2badded puwr ess routine :)editTransportMaps/Samplers/Routines.pyaddTransportMaps/Samplers/puwr.pyExamples/research/cantilever-timoshenko/GaussianFieldDataGeneration.pyb2331f8923bc121a8fda8ff4887879f1cfcf7b891557428137000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.ittimoshenko... 2019-05-09 14:55:37 -0400b2331f8923bc121a8fda8ff4887879f1cfcf7b89timoshenko...editExamples/research/cantilever-timoshenko/GaussianFieldDataGeneration.pyTransportMaps/CLI/PostprocessBase.pyExamples/research/cantilever-timoshenko/solver.pyExamples/research/cantilever-timoshenko/GaussianFieldDataGeneration.pyTransportMaps/Distributions/Examples/Timoshenko/__init__.pyTransportMaps/Distributions/Examples/Timoshenko/TimoshenkoDistributions.pyTransportMaps/Distributions/Examples/Timoshenko/TimoshenkoProblems.py0d52e95ff4f68c24840dcf457f16a108a5f569271557441607000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on timoshenko 2019-05-09 18:40:07 -04000d52e95ff4f68c24840dcf457f16a108a5f56927working on timoshenkoeditExamples/research/cantilever-timoshenko/solver.pyeditExamples/research/cantilever-timoshenko/GaussianFieldDataGeneration.pyeditTransportMaps/Distributions/Examples/Timoshenko/TimoshenkoDistributions.pyeditTransportMaps/Distributions/Examples/Timoshenko/TimoshenkoProblems.pyeditTransportMaps/CLI/PostprocessBase.pyeditTransportMaps/Distributions/Examples/Timoshenko/__init__.pyExamples/research/cantilever-timoshenko/GaussianFieldDataGeneration.pyTransportMaps/Distributions/Examples/Timoshenko/TimoshenkoProblems.pyTransportMaps/Distributions/Examples/Timoshenko/TimoshenkoDistributions.pyb457f979dacf214bf648598405e8ab55d075948c1557470232000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on timoshenko 2019-05-10 02:37:12 -0400b457f979dacf214bf648598405e8ab55d075948cworking on timoshenkoeditExamples/research/cantilever-timoshenko/GaussianFieldDataGeneration.pyeditTransportMaps/Distributions/Examples/Timoshenko/TimoshenkoProblems.pyeditTransportMaps/Distributions/Examples/Timoshenko/TimoshenkoDistributions.pyExamples/research/cantilever-timoshenko/GaussianFieldDataGeneration.pyTransportMaps/Distributions/Examples/Timoshenko/TimoshenkoDistributions.pyTransportMaps/Distributions/Examples/Timoshenko/TimoshenkoProblems.pycd96db57aee7d45c30561cbdcc00ce8e0283b3ae1557512802000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.ittimoshenko set up done 2019-05-10 14:26:42 -0400cd96db57aee7d45c30561cbdcc00ce8e0283b3aetimoshenko set up doneeditTransportMaps/Distributions/Examples/Timoshenko/TimoshenkoDistributions.pyeditTransportMaps/Distributions/Examples/Timoshenko/TimoshenkoProblems.pyeditExamples/research/cantilever-timoshenko/GaussianFieldDataGeneration.pyTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapsConstructionBase.pyTransportMaps/Builders/BuilderBase.pyTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapFactories.pyTransportMaps/Distributions/Examples/Timoshenko/TimoshenkoProblems.py929f7b7c80957dc798c7b3cedccc3bb8bdf882061557518490000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.ittimoshenko works O_O' 2019-05-10 16:01:30 -0400929f7b7c80957dc798c7b3cedccc3bb8bdf88206timoshenko works O_O'editTransportMaps/Distributions/Examples/Timoshenko/TimoshenkoProblems.pyeditTransportMaps/Builders/BuilderBase.pyeditTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapsConstructionBase.pyeditTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapFactories.pyTransportMaps/CLI/PostprocessBase.pysetup.pyExamples/research/LazyMaps/cantilever-timoshenko/postprocess.pyrequirements.txtscripts/tmap-deep-lazy-trimf275b70efe5c723d8aef6627c5ad98731061bbd91557524528000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itpostprocessing timoshenko 2019-05-10 17:42:08 -0400f275b70efe5c723d8aef6627c5ad98731061bbd9postprocessing timoshenkoaddExamples/research/LazyMaps/cantilever-timoshenko/postprocess.pyeditrequirements.txteditTransportMaps/CLI/PostprocessBase.pyaddscripts/tmap-deep-lazy-trimeditsetup.pyTransportMaps/Diagnostics/Plotting.pyTransportMaps/CLI/PostprocessBase.pyExamples/research/LazyMaps/cantilever-timoshenko/postprocess.py7ccb2c29505938a7218a9d4e7f02c766c24956bf1557742692000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on timoshenko 2019-05-13 06:18:12 -04007ccb2c29505938a7218a9d4e7f02c766c24956bfworking on timoshenkoeditExamples/research/LazyMaps/cantilever-timoshenko/postprocess.pyeditTransportMaps/Diagnostics/Plotting.pyeditTransportMaps/CLI/PostprocessBase.pyrequirements.txtTransportMaps/CLI/DeepLazyMapsConstructionScriptBase.pyTransportMaps/Distributions/FrozenDistributions.pyExamples/research/LazyMaps/banana/banana.pysetup.pyTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapsConstructionBase.pyTransportMaps/Diagnostics/Plotting.pyTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapFactories.py6708ed6c5b5404971e050ad2a52419d32f7871b61557847410000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.ithard truncation is back.. 2019-05-14 11:23:30 -04006708ed6c5b5404971e050ad2a52419d32f7871b6hard truncation is back..editTransportMaps/CLI/DeepLazyMapsConstructionScriptBase.pyeditTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapsConstructionBase.pyeditTransportMaps/Distributions/FrozenDistributions.pyeditsetup.pyeditExamples/research/LazyMaps/banana/banana.pyeditTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapFactories.pyeditTransportMaps/Diagnostics/Plotting.pyeditrequirements.txtExamples/research/LazyMaps/LogGaussianCoxProcess/Postprocess-unbiased-mean-std.pyExamples/research/LazyMaps/LogGaussianCoxProcess/PlotData.pyExamples/research/LazyMaps/LogGaussianCoxProcess/DataGeneration.pyExamples/research/LazyMaps/banana/banana.pyTransportMaps/Distributions/Examples/LogGaussianCoxProcess/__init__.pyTransportMaps/Maps/MapBase.pyExamples/research/LazyMaps/LogGaussianCoxProcess/Postprocess-realizations.pyExamples/research/LazyMaps/LogGaussianCoxProcess/Postprocess-mean-std.pyExamples/research/LazyMaps/LogGaussianCoxProcess/TestData.pyTransportMaps/Distributions/Examples/LogGaussianCoxProcess/LogGaussianCoxProcessDistributions.pyTransportMaps/Maps/ListCompositeMapBase.pyTransportMaps/Maps/FrozenTriangularTransportMaps.pyTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapsConstructionBase.pyExamples/research/LogGaussianCoxProcess/LogGaussianCoxProcessDistributions.pybdaf6c5d27a7599f7e6414c40e32b555399a2b2c1558177528000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itimproved action_grad_x with action_adjoint_grad_x to compute gradients left to right if output < input 2019-05-18 07:05:28 -0400bdaf6c5d27a7599f7e6414c40e32b555399a2b2cimproved action_grad_x with action_adjoint_grad_x to compute gradients left to right if output < inputaddExamples/research/LazyMaps/LogGaussianCoxProcess/DataGeneration.pyaddExamples/research/LazyMaps/LogGaussianCoxProcess/TestData.pyeditTransportMaps/Distributions/Examples/LogGaussianCoxProcess/__init__.pyaddExamples/research/LazyMaps/LogGaussianCoxProcess/Postprocess-unbiased-mean-std.pyaddExamples/research/LazyMaps/LogGaussianCoxProcess/Postprocess-mean-std.pyaddExamples/research/LazyMaps/LogGaussianCoxProcess/PlotData.pyeditExamples/research/LazyMaps/banana/banana.pydeleteExamples/research/LogGaussianCoxProcess/LogGaussianCoxProcessDistributions.pyeditTransportMaps/Maps/FrozenTriangularTransportMaps.pyeditTransportMaps/Maps/ListCompositeMapBase.pyaddExamples/research/LazyMaps/LogGaussianCoxProcess/Postprocess-realizations.pyeditTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapsConstructionBase.pyaddTransportMaps/Distributions/Examples/LogGaussianCoxProcess/LogGaussianCoxProcessDistributions.pyeditTransportMaps/Maps/MapBase.pyTransportMaps/Maps/ListCompositeMapBase.pye21cefd4ffde6e495d18d0e8c0187995afa079671558177612000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itimproved action_grad_x with action_adjoint_grad_x to compute gradients left to right if output < input 2019-05-18 07:06:52 -0400e21cefd4ffde6e495d18d0e8c0187995afa07967improved action_grad_x with action_adjoint_grad_x to compute gradients left to right if output < inputeditTransportMaps/Maps/ListCompositeMapBase.pyTransportMaps/Maps/IdentityEmbeddedTransportMapBase.py868da3b0ba40537c4e8d928684ec15796f74c4da1558179185000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itimplementing missing adjoint functions 2019-05-18 07:33:05 -0400868da3b0ba40537c4e8d928684ec15796f74c4daimplementing missing adjoint functionseditTransportMaps/Maps/IdentityEmbeddedTransportMapBase.pyExamples/research/LazyMaps/LogGaussianCoxProcess/PlotData.pyTransportMaps/Maps/ListCompositeTransportMapBase.pyTransportMaps/Distributions/Examples/LogGaussianCoxProcess/LogGaussianCoxProcessDistributions.pyExamples/research/LazyMaps/LogGaussianCoxProcess/DataGeneration.pyExamples/research/LazyMaps/banana/banana.pyTransportMaps/Maps/ListCompositeMapBase.pyTransportMaps/Maps/IdentityEmbeddedTransportMapBase.pyTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapsConstructionBase.pyTransportMaps/Maps/TransportMapBase.py4ac0a3b6c25616bcceb703b324f9ec82a8835e571558358628000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itDone with LogCox for Lazy maps 2019-05-20 08:23:48 -05004ac0a3b6c25616bcceb703b324f9ec82a8835e57Done with LogCox for Lazy mapseditTransportMaps/Distributions/Examples/LogGaussianCoxProcess/LogGaussianCoxProcessDistributions.pyeditTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapsConstructionBase.pyeditTransportMaps/Maps/IdentityEmbeddedTransportMapBase.pyeditTransportMaps/Maps/ListCompositeMapBase.pyeditTransportMaps/Maps/TransportMapBase.pyeditExamples/research/LazyMaps/LogGaussianCoxProcess/DataGeneration.pyeditExamples/research/LazyMaps/banana/banana.pyeditExamples/research/LazyMaps/LogGaussianCoxProcess/PlotData.pyeditTransportMaps/Maps/ListCompositeTransportMapBase.pyTransportMaps/Distributions/ConditionalDistributions.pyExamples/research/LazyMaps/cantilever-timoshenko/postprocess.pyTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapsConstructionBase.pyExamples/research/cantilever-timoshenko/GaussianFieldDataGeneration.py4d83a413ea12dd1069811fff5737c921149033181558358654000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on cantilever 2019-05-20 09:24:14 -04004d83a413ea12dd1069811fff5737c92114903318working on cantilevereditExamples/research/cantilever-timoshenko/GaussianFieldDataGeneration.pyeditExamples/research/LazyMaps/cantilever-timoshenko/postprocess.pyeditTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapsConstructionBase.pyeditTransportMaps/Distributions/ConditionalDistributions.pyExamples/research/PoissonProblem/whiten.pyTransportMaps/Distributions/Examples/PoissonProblem/PoissonProblems.py589c6232d8275fee8a5fd5130e8505eec4fea5601558365246000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itstaring with Poisson 2019-05-20 11:14:06 -0400589c6232d8275fee8a5fd5130e8505eec4fea560staring with PoissoneditTransportMaps/Distributions/Examples/PoissonProblem/PoissonProblems.pyeditExamples/research/PoissonProblem/whiten.pyExamples/research/LazyMaps/poisson/visualize_distribution.pyExamples/research/LazyMaps/banana/banana.pyTransportMaps/Maps/IdentityEmbeddedTransportMapBase.pyTransportMaps/Maps/__init__.pyTransportMaps/Maps/ParametricTransportMapBase.pyTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapsConstructionBase.pyTransportMaps/Maps/ParametricTriangularComponentwiseTransportMapBase.pyTransportMaps/Maps/IdentityEmbeddedParametricTransportMapBase.pyExamples/research/cantilever-timoshenko/GaussianFieldDataGeneration.pyTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapFactories.pycc87970e25dbe33c03a2b8b2f068f662ca53591d1558405264000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itadded IdentityEmbeddedParametricTransprotMap and made minimize_kl_divergence general for any parametric transport map 2019-05-20 22:21:04 -0400cc87970e25dbe33c03a2b8b2f068f662ca53591dadded IdentityEmbeddedParametricTransprotMap and made minimize_kl_divergence general for any parametric transport mapeditTransportMaps/Maps/ParametricTriangularComponentwiseTransportMapBase.pyeditExamples/research/cantilever-timoshenko/GaussianFieldDataGeneration.pyeditTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapFactories.pyeditExamples/research/LazyMaps/banana/banana.pyeditTransportMaps/Maps/IdentityEmbeddedTransportMapBase.pyeditTransportMaps/Maps/ParametricTransportMapBase.pyeditTransportMaps/Maps/__init__.pyeditTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapsConstructionBase.pyeditExamples/research/LazyMaps/poisson/visualize_distribution.pyaddTransportMaps/Maps/IdentityEmbeddedParametricTransportMapBase.pyTransportMaps/DOLFIN/SolverBase.pyExamples/research/cantilever-timoshenko/GaussianFieldDataGeneration.pyTransportMaps/Distributions/Examples/Timoshenko/TimoshenkoProblems.pyTransportMaps/Distributions/Examples/Timoshenko/TimoshenkoDistributions.py6dacc1bf9cc5eb31e5ca541342bc16e76d8c6b8c1558411498000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itadded dolfin version markers/warnings for solvers 2019-05-21 00:04:58 -04006dacc1bf9cc5eb31e5ca541342bc16e76d8c6b8cadded dolfin version markers/warnings for solverseditExamples/research/cantilever-timoshenko/GaussianFieldDataGeneration.pyeditTransportMaps/Distributions/Examples/Timoshenko/TimoshenkoProblems.pyeditTransportMaps/DOLFIN/SolverBase.pyeditTransportMaps/Distributions/Examples/Timoshenko/TimoshenkoDistributions.pyExamples/research/LazyMaps/poisson/postprocess-plotting.pyTransportMaps/CLI/PostprocessBase.pyExamples/research/LazyMaps/poisson/visualize_distribution.py8768f9145646c2b826b5dd6286075e1cbc5027851558496960000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itmodified ess reporting 2019-05-21 23:49:20 -04008768f9145646c2b826b5dd6286075e1cbc502785modified ess reportingeditTransportMaps/CLI/PostprocessBase.pyeditExamples/research/LazyMaps/poisson/visualize_distribution.pyeditExamples/research/LazyMaps/poisson/postprocess-plotting.pyExamples/research/LazyMaps/cantilever-timoshenko/postprocess.pyTransportMaps/DOLFIN/SolverBase.pyExamples/research/LazyMaps/banana/banana.pyExamples/research/cantilever-timoshenko/GaussianFieldDataGeneration.py966a9ec4aab2c546b1592564413df1cada7bcec71558496978000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on timoshenko 2019-05-21 23:49:38 -0400966a9ec4aab2c546b1592564413df1cada7bcec7working on timoshenkoeditExamples/research/LazyMaps/banana/banana.pyeditExamples/research/LazyMaps/cantilever-timoshenko/postprocess.pyeditTransportMaps/DOLFIN/SolverBase.pyeditExamples/research/cantilever-timoshenko/GaussianFieldDataGeneration.pyExamples/research/LazyMaps/LogGaussianCoxProcess/postprocess-convergence.pyExamples/research/LazyMaps/LogGaussianCoxProcess/postprocess-spectrum.pyExamples/research/LazyMaps/banana/banana.pyExamples/research/LazyMaps/LogGaussianCoxProcess/postprocess-plotting.pyTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapsConstructionBase.pyExamples/research/LazyMaps/cantilever-timoshenko/postprocess.pyTransportMaps/Diagnostics/Plotting.py672c49adb78f6aa4675e97636e579feb902178971558563762000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itgoing on with plots 2019-05-22 18:22:42 -0400672c49adb78f6aa4675e97636e579feb90217897going on with plotseditTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapsConstructionBase.pyaddExamples/research/LazyMaps/LogGaussianCoxProcess/postprocess-convergence.pyeditExamples/research/LazyMaps/cantilever-timoshenko/postprocess.pyeditTransportMaps/Diagnostics/Plotting.pyaddExamples/research/LazyMaps/LogGaussianCoxProcess/postprocess-plotting.pyaddExamples/research/LazyMaps/LogGaussianCoxProcess/postprocess-spectrum.pyeditExamples/research/LazyMaps/banana/banana.pyExamples/research/LazyMaps/cantilever-timoshenko/postprocess.pya52436c8cd1563b6c8d92b65bd4f662b6e6834a01558566595000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.ittimoshenko plots 2019-05-22 19:09:55 -0400a52436c8cd1563b6c8d92b65bd4f662b6e6834a0timoshenko plotseditExamples/research/LazyMaps/cantilever-timoshenko/postprocess.pyExamples/research/LazyMaps/poisson/postprocess-convergence.py495200e537daf7ad0b929b2efceec0fbbea460571558566942000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itpoisson plots 2019-05-22 19:15:42 -0400495200e537daf7ad0b929b2efceec0fbbea46057poisson plotsaddExamples/research/LazyMaps/poisson/postprocess-convergence.pyMANIFEST.ine185afe60c5f73514308036c4d8101c0458da0631558619651000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itpreparing code for submission NIPS 2019-05-23 09:54:11 -0400e185afe60c5f73514308036c4d8101c0458da063preparing code for submission NIPSeditMANIFEST.inTransportMaps/Distributions/Examples/PoissonProblem/PoissonDistributions.pyb70ecb7e44476f811be459e029f97fe09719e5eb1558734450000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on Poisson... 2019-05-24 17:47:30 -0400b70ecb7e44476f811be459e029f97fe09719e5ebworking on Poisson...editTransportMaps/Distributions/Examples/PoissonProblem/PoissonDistributions.pyTransportMaps/Distributions/Examples/PoissonProblem/PoissonDistributions.pyTransportMaps/LaplaceApproximationRoutines.pyTransportMaps/Samplers/MarkovChainSamplers.pyTransportMaps/Maps/MapBase.py95cf09643cdb2bc911093b585be3a40967b5d2861559143977000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itmodified poisson distribution (with diagonal likielihood) to allow for lis type model reduction 2019-05-29 11:32:57 -040095cf09643cdb2bc911093b585be3a40967b5d286modified poisson distribution (with diagonal likielihood) to allow for lis type model reductioneditTransportMaps/LaplaceApproximationRoutines.pyeditTransportMaps/Samplers/MarkovChainSamplers.pyeditTransportMaps/Distributions/Examples/PoissonProblem/PoissonDistributions.pyeditTransportMaps/Maps/MapBase.pyTransportMaps/LaplaceApproximationRoutines.pyd2aae59f11eec79f14694d9a51f6c19695315b891560197746000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itLaplace approximation log output to INFO 2019-06-10 16:15:46 -0400d2aae59f11eec79f14694d9a51f6c19695315b89Laplace approximation log output to INFOeditTransportMaps/LaplaceApproximationRoutines.pyjenkins/test-source.sh9574b9da2c23e7d99c522541ec6046368b04b7951560362581000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.ittest-source.sh added PATH for Jenkins 2019-06-12 18:03:01 +00009574b9da2c23e7d99c522541ec6046368b04b795test-source.sh added PATH for Jenkinseditjenkins/test-source.shsetup.py0d556af663a229719a3dec989bb127c6e1ea60d21560375113000https://acdl.mit.edu/csi/user/rsbrsbrsb@mit.eduupdate setup 2019-06-12 17:31:53 -04000d556af663a229719a3dec989bb127c6e1ea60d2update setupeditsetup.pysetup.py85f04edbd453d1b052b13feecba50bb258538faa1560375184000https://acdl.mit.edu/csi/user/rsbrsbrsb@mit.eduupdating setup 2019-06-12 17:33:04 -040085f04edbd453d1b052b13feecba50bb258538faaupdating setupeditsetup.pyTransportMaps/Algorithms/SparsityIdentification/RegularizedMap.py5c57be8d6b07b1aee9fb054c48171379ffd67e951560379064000https://acdl.mit.edu/csi/user/rsbrsbrsb@mit.eduupdating default map call 2019-06-12 18:37:44 -04005c57be8d6b07b1aee9fb054c48171379ffd67e95updating default map calleditTransportMaps/Algorithms/SparsityIdentification/RegularizedMap.pyExamples/research/MonotoneTransport-paper/Poisson/postprocess-tc.pyExamples/research/PoissonProblem/whiten.pyTransportMaps/Distributions/Examples/PoissonProblem/PoissonDistributions.py.gitignorescripts/tmap-laplaceTransportMaps/Maps/ListCompositeMapBase.pyTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapFactories.pyExamples/research/MonotoneTransport-paper/Poisson/subspace-reduction.pyd1b4b7bed8ab47a8f599a60c9ed37c80527fc6401560451453000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on poisson 2019-06-13 14:44:13 -0400d1b4b7bed8ab47a8f599a60c9ed37c80527fc640working on poissoneditTransportMaps/Distributions/Examples/PoissonProblem/PoissonDistributions.pyedit.gitignoreeditExamples/research/MonotoneTransport-paper/Poisson/postprocess-tc.pyeditTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapFactories.pyeditExamples/research/PoissonProblem/whiten.pyeditExamples/research/MonotoneTransport-paper/Poisson/subspace-reduction.pyeditTransportMaps/Maps/ListCompositeMapBase.pyeditscripts/tmap-laplaceTransportMaps/Algorithms/SparsityIdentification/RegularizedMap.py96df1b7d3f0d82af8c37e5b8b035116c8e3d5f731560451507000https://acdl.mit.edu/csi/user/rsbrsbrsb@mit.eduupdating to TMv3 2019-06-13 14:45:07 -040096df1b7d3f0d82af8c37e5b8b035116c8e3d5f73updating to TMv3editTransportMaps/Algorithms/SparsityIdentification/RegularizedMap.pyTransportMaps/Maps/ParametricTransportMapBase.pyTransportMaps/Maps/ParametricTriangularComponentwiseTransportMapBase.pyTransportMaps/Maps/TransportMapBase.pyExamples/research/sparsity/algorithm/run_sing_xstar.pyTransportMaps/Algorithms/SparsityIdentification/SparsityIdentificationNonGaussian.pycb97e714408df809dd33a68161f8fff5729a3abf1560452822000https://acdl.mit.edu/csi/user/rsbrsbrsb@mit.eduupdating hess x to TM v3 2019-06-13 15:07:02 -0400cb97e714408df809dd33a68161f8fff5729a3abfupdating hess x to TM v3editTransportMaps/Maps/ParametricTriangularComponentwiseTransportMapBase.pyeditTransportMaps/Algorithms/SparsityIdentification/SparsityIdentificationNonGaussian.pyeditExamples/research/sparsity/algorithm/run_sing_xstar.pyeditTransportMaps/Maps/TransportMapBase.pyeditTransportMaps/Maps/ParametricTransportMapBase.pyExamples/research/sparsity/NPN_samplesize_test/run_sing_copula.pyExamples/research/sparsity/Lorenz_96/data/L96_problem_setup.mExamples/research/sparsity/Banana_beta2/data/generate_npn_data.pyExamples/research/sparsity/Lorenz_96/run_sing.pyExamples/research/sparsity/Banana_beta2/run_sing_banana.pyExamples/research/sparsity/NPN_samplesize_test/generate_npn_data.pyExamples/research/sparsity/Banana_beta2/pp_alg_errors.pyExamples/research/sparsity/Lorenz_96/data/rk4.mExamples/research/sparsity/Lorenz_96/data/lorenz96.mExamples/research/sparsity/Lorenz_96/data/generate_data.mTransportMaps/Algorithms/SparsityIdentification/GeneralizedPrecision.pyExamples/research/sparsity/Banana_beta2/data/banana_pushforward.mExamples/research/sparsity/Lorenz_96/data/L96_data.matExamples/research/sparsity/Banana_beta2/data/banana.matExamples/research/sparsity/NPN_samplesize_test/run_NPNcdf_multipleN.pyExamples/research/sparsity/Banana_beta2/data/banana_samples.mExamples/research/sparsity/NPN_samplesize_test/pp_alg_errors.py2fdbbbeefc1e1fc376eaa4abcfd65980461c5d3a1560638549000https://acdl.mit.edu/csi/user/rsbrsbrsb@mit.eduupdating numerical examples for SING 2019-06-15 18:42:29 -04002fdbbbeefc1e1fc376eaa4abcfd65980461c5d3aupdating numerical examples for SINGaddExamples/research/sparsity/NPN_samplesize_test/run_sing_copula.pyaddExamples/research/sparsity/Banana_beta2/data/generate_npn_data.pyaddExamples/research/sparsity/Banana_beta2/data/banana_samples.maddExamples/research/sparsity/NPN_samplesize_test/pp_alg_errors.pyaddExamples/research/sparsity/NPN_samplesize_test/generate_npn_data.pyaddExamples/research/sparsity/Lorenz_96/run_sing.pyaddExamples/research/sparsity/Banana_beta2/pp_alg_errors.pyaddExamples/research/sparsity/Lorenz_96/data/rk4.maddExamples/research/sparsity/Banana_beta2/data/banana_pushforward.maddExamples/research/sparsity/Lorenz_96/data/L96_data.mataddExamples/research/sparsity/Banana_beta2/data/banana.mateditTransportMaps/Algorithms/SparsityIdentification/GeneralizedPrecision.pyaddExamples/research/sparsity/Lorenz_96/data/generate_data.maddExamples/research/sparsity/Banana_beta2/run_sing_banana.pyaddExamples/research/sparsity/Lorenz_96/data/L96_problem_setup.maddExamples/research/sparsity/Lorenz_96/data/lorenz96.maddExamples/research/sparsity/NPN_samplesize_test/run_NPNcdf_multipleN.pyTransportMaps/Distributions/Decomposable/LinearGaussianSequentialInferenceDistributions.pyTransportMaps/tests/test_kl_divergence.pyTransportMaps/tests/test_distributions.pyTransportMaps/Maps/FrozenTriangularTransportMaps.pyTransportMaps/Maps/ParametricTriangularComponentwiseTransportMapBase.pyTransportMaps/Distributions/Examples/StochasticVolatility/StocVolHyperDistributions.pyTransportMaps/Likelihoods/LikelihoodBase.py2e510b9faea5a5b5c52c1676ae91fdde5e7076381563918759000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itfixing tests 2019-07-23 17:52:39 -04002e510b9faea5a5b5c52c1676ae91fdde5e707638fixing testseditTransportMaps/Distributions/Decomposable/LinearGaussianSequentialInferenceDistributions.pyeditTransportMaps/Maps/ParametricTriangularComponentwiseTransportMapBase.pyeditTransportMaps/Distributions/Examples/StochasticVolatility/StocVolHyperDistributions.pyeditTransportMaps/Likelihoods/LikelihoodBase.pyeditTransportMaps/tests/test_distributions.pyeditTransportMaps/tests/test_kl_divergence.pyeditTransportMaps/Maps/FrozenTriangularTransportMaps.pyTransportMaps/Algorithms/SequentialInference/LinearSequentialInference.pyTransportMaps/DOLFIN/SolverBase.pyTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyTransportMaps/Distributions/Decomposable/SequentialInferenceDistributions.pyTransportMaps/tests/test_scripts.pyTransportMaps/Misc.pyTransportMaps/Distributions/Inference/InferenceBase.pyTransportMaps/CLI/ConstructionScriptBase.pybbef3ee13371b54935e1ac3f0dcb6afe9744c8401563998699000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itfixed unit tests 2019-07-24 16:04:59 -0400bbef3ee13371b54935e1ac3f0dcb6afe9744c840fixed unit testseditTransportMaps/Algorithms/SequentialInference/LinearSequentialInference.pyeditTransportMaps/Distributions/Inference/InferenceBase.pyeditTransportMaps/Algorithms/SequentialInference/NonLinearSequentialInference.pyeditTransportMaps/DOLFIN/SolverBase.pyeditTransportMaps/Misc.pyeditTransportMaps/tests/test_scripts.pyeditTransportMaps/Distributions/Decomposable/SequentialInferenceDistributions.pyeditTransportMaps/CLI/ConstructionScriptBase.pyjenkins/test-source.sh196d636efa5f15fa32653f880d659f9b468ccff31563998905000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itadded pip install cython in jenkins script 2019-07-24 16:08:25 -0400196d636efa5f15fa32653f880d659f9b468ccff3added pip install cython in jenkins scripteditjenkins/test-source.shjenkins/test-source.shMANIFEST.inb909bc6544cc32e1ecd387d9a9e7771d271e8a221564000027000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itadded .pyx to the manifest 2019-07-24 16:27:07 -0400b909bc6544cc32e1ecd387d9a9e7771d271e8a22added .pyx to the manifesteditjenkins/test-source.sheditMANIFEST.injenkins/test-source.shf790e50519270b5109ce3b00654e479f40cdc7871564000121000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itupdated jenkins script 2019-07-24 16:28:41 -0400f790e50519270b5109ce3b00654e479f40cdc787updated jenkins scripteditjenkins/test-source.shjenkins/test-source.she89a6fd92dec7234906742bb56340a16c1d28a421564000278000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on jenkins script 2019-07-24 16:31:18 -0400e89a6fd92dec7234906742bb56340a16c1d28a42working on jenkins scripteditjenkins/test-source.shjenkins/test-pypi.shjenkins/test-testpypi.sh209ce2cddd39affd40c017328bfe825cfdf734971564003605000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itpassing all tests and updated jenkins scripts 2019-07-24 17:26:45 -0400209ce2cddd39affd40c017328bfe825cfdf73497passing all tests and updated jenkins scriptseditjenkins/test-pypi.sheditjenkins/test-testpypi.shTransportMaps/CLI/ConstructionScriptBase.pyda05280825e4de43c5c27a945ed5e4581c6a41cb1564063810000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itfixed construction script 2019-07-25 10:10:10 -0400da05280825e4de43c5c27a945ed5e4581c6a41cbfixed construction scripteditTransportMaps/CLI/ConstructionScriptBase.pysetup.pyTransportMaps/Distributions/Examples/Lorenz96/Lorenz96Distributions.py4c1dbd74b2710b1c244fa1e9a553f62329c59f091564077200000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itmade CYTHON submodules optional 2019-07-25 13:53:20 -04004c1dbd74b2710b1c244fa1e9a553f62329c59f09made CYTHON submodules optionaleditsetup.pyeditTransportMaps/Distributions/Examples/Lorenz96/Lorenz96Distributions.pyTransportMaps/Distributions/Examples/Lorenz96/__init__.py6163883c90ae3d6bf157e85f49ebc858abaddb581564077990000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itmade CYTHON submodules optional 2019-07-25 14:06:30 -04006163883c90ae3d6bf157e85f49ebc858abaddb58made CYTHON submodules optionaleditTransportMaps/Distributions/Examples/Lorenz96/__init__.pyExamples/research/LazyMaps/LogGaussianCoxProcess/postprocess-convergence-random-rotations.pyTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapsConstructionBase.pyTransportMaps/CLI/DeepLazyMapsConstructionScriptBase.pya88346f5ebea3bddae3de8a86cb240b4b295be161564419087000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworkign on random rotations 2019-07-29 12:51:27 -0400a88346f5ebea3bddae3de8a86cb240b4b295be16workign on random rotationseditTransportMaps/CLI/DeepLazyMapsConstructionScriptBase.pyaddExamples/research/LazyMaps/LogGaussianCoxProcess/postprocess-convergence-random-rotations.pyeditTransportMaps/Algorithms/DeepLazyMaps/DeepLazyMapsConstructionBase.pyTransportMaps/Distributions/Examples/LogisticRegression/_LogisticRegressionDistributions.pyExamples/research/LazyMaps/LogGaussianCoxProcess/postprocess-convergence-random-rotations.pyTransportMaps/Likelihoods/LikelihoodBase.pyb5301457e5f3eddcef5db97e6468f945d7de29c31564440285000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on LogisticRegression model 2019-07-29 18:44:45 -0400b5301457e5f3eddcef5db97e6468f945d7de29c3working on LogisticRegression modeleditTransportMaps/Likelihoods/LikelihoodBase.pyaddTransportMaps/Distributions/Examples/LogisticRegression/_LogisticRegressionDistributions.pyeditExamples/research/LazyMaps/LogGaussianCoxProcess/postprocess-convergence-random-rotations.pyExamples/research/LazyMaps/parkinson/dummy.txt8d80bddf72651a9032630f474a4128631b7d97e91564463382000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on parkinson 2019-07-30 01:09:42 -04008d80bddf72651a9032630f474a4128631b7d97e9working on parkinsonaddExamples/research/LazyMaps/parkinson/dummy.txtTransportMaps/Likelihoods/LikelihoodBase.pye65c4dde622beb659d08730aa490a74a85dee99a1564463407000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itdone likelikhood 2019-07-30 01:10:07 -0400e65c4dde622beb659d08730aa490a74a85dee99adone likelikhoodeditTransportMaps/Likelihoods/LikelihoodBase.pyTransportMaps/CLI/DeepLazyMapsConstructionScriptBase.pyExamples/research/LazyMaps/parkinson/GenerateDistribution.pyTransportMaps/Likelihoods/LikelihoodBase.py7036c13fa080c465e547dca40b6a58a0525cf8081564499966000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itdistribution generation done 2019-07-30 11:19:26 -04007036c13fa080c465e547dca40b6a58a0525cf808distribution generation doneeditTransportMaps/CLI/DeepLazyMapsConstructionScriptBase.pyaddExamples/research/LazyMaps/parkinson/GenerateDistribution.pyeditTransportMaps/Likelihoods/LikelihoodBase.pyExamples/research/LazyMaps/parkinson/GenerateDistribution.pyTransportMaps/Likelihoods/LikelihoodBase.pya92c3a30ff263a7d72877c097877ee7afb2a945d1564524157000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on results for logit problem 2019-07-30 18:02:37 -0400a92c3a30ff263a7d72877c097877ee7afb2a945dworking on results for logit problemeditExamples/research/LazyMaps/parkinson/GenerateDistribution.pyeditTransportMaps/Likelihoods/LikelihoodBase.pyExamples/research/LazyMaps/parkinson/GenerateDistribution.pyc46fb77c97a4d950d5a516939535071901eeeba91564524950000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on differente settings for parkinson 2019-07-30 18:15:50 -0400c46fb77c97a4d950d5a516939535071901eeeba9working on differente settings for parkinsoneditExamples/research/LazyMaps/parkinson/GenerateDistribution.pyExamples/research/LazyMaps/parkinson/dummy.txtExamples/research/LazyMaps/parkinson/posterior-predictive-check.pyTransportMaps/Likelihoods/LikelihoodBase.py981b98c80d21267b599a367fbf7586a177860fb21564552153000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on posterior predictive 2019-07-31 01:49:13 -0400981b98c80d21267b599a367fbf7586a177860fb2working on posterior predictiveaddExamples/research/LazyMaps/parkinson/posterior-predictive-check.pyeditTransportMaps/Likelihoods/LikelihoodBase.pydeleteExamples/research/LazyMaps/parkinson/dummy.txtTransportMaps/Likelihoods/LikelihoodBase.py56f6f420f13fcb02a54c34c5c6df9e7106e7f0c71564583264000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itmod to logit likelihood 2019-07-31 10:27:44 -040056f6f420f13fcb02a54c34c5c6df9e7106e7f0c7mod to logit likelihoodeditTransportMaps/Likelihoods/LikelihoodBase.pyTransportMaps/Likelihoods/LikelihoodBase.pyf8e92695e3ad4bf37e7b76dba6f9990cffa21a941564583292000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on stan example 2019-07-31 10:28:12 -0400f8e92695e3ad4bf37e7b76dba6f9990cffa21a94working on stan exampleeditTransportMaps/Likelihoods/LikelihoodBase.pyExamples/research/LazyMaps/stan-spelling/GenerateDistribution.pyTransportMaps/Maps/IdentityEmbeddedTransportMapBase.pyTransportMaps/Likelihoods/LikelihoodBase.py259c7c4cd9f1f32d6ccd5028693ad31131b125551564609781000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on stan example 2019-07-31 17:49:41 -0400259c7c4cd9f1f32d6ccd5028693ad31131b12555working on stan exampleeditTransportMaps/Likelihoods/LikelihoodBase.pyeditTransportMaps/Maps/IdentityEmbeddedTransportMapBase.pyaddExamples/research/LazyMaps/stan-spelling/GenerateDistribution.pyTransportMaps/Maps/ListCompositeMapBase.pya26e7becadaed7dc7642a338711a6da3857140d71564684195000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itfixed bug in adjoint_grad_x for composite maps 2019-08-01 14:29:55 -0400a26e7becadaed7dc7642a338711a6da3857140d7fixed bug in adjoint_grad_x for composite mapseditTransportMaps/Maps/ListCompositeMapBase.pyExamples/research/LazyMaps/parkinson/posterior-predictive-check.pyExamples/research/LazyMaps/parkinson/GenerateDistribution.pyTransportMaps/Likelihoods/LikelihoodBase.py8fba19b928b53cdcae904a25bb77e16c779720c71564770910000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on parkinson dataset 2019-08-02 14:35:10 -04008fba19b928b53cdcae904a25bb77e16c779720c7working on parkinson dataseteditExamples/research/LazyMaps/parkinson/GenerateDistribution.pyeditTransportMaps/Likelihoods/LikelihoodBase.pyeditExamples/research/LazyMaps/parkinson/posterior-predictive-check.pyTransportMaps/Likelihoods/LikelihoodBase.py123a93e69180b1209dadfcbf968c73ea3b35831b1564772310000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itworking on parkinson data set 2019-08-02 14:58:30 -0400123a93e69180b1209dadfcbf968c73ea3b35831bworking on parkinson data seteditTransportMaps/Likelihoods/LikelihoodBase.pyExamples/research/LazyMaps/parkinson/posterior-predictive-check.pyTransportMaps/Likelihoods/LikelihoodBase.py11c90b66e88e4eb8258fa1bb55b4871a46d399741564861891000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itfixed log-likelihood for logistic regression models with log(1+\eps) approximation 2019-08-03 15:51:31 -040011c90b66e88e4eb8258fa1bb55b4871a46d39974fixed log-likelihood for logistic regression models with log(1+\eps) approximationeditExamples/research/LazyMaps/parkinson/posterior-predictive-check.pyeditTransportMaps/Likelihoods/LikelihoodBase.pyTransportMaps/Maps/TransportMapBase.pyd6b011a402126bf5a1bdc3f80fa7bfd5ad7960be1564937343000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itfixed bug in hess_x_log_pullback function 2019-08-04 12:49:03 -0400d6b011a402126bf5a1bdc3f80fa7bfd5ad7960befixed bug in hess_x_log_pullback functioneditTransportMaps/Maps/TransportMapBase.pyDocs/source/auxiliary/xml/LinearSpan.xmlDocs/source/aux/inv-stocvol/Sequential-IntSq-Postprocess.dillDocs/source/aux/xml/IntSqSecOrd.xmlDocs/source/auxiliary/inv-stocvol/Sequential-IntSq.dillDocs/source/aux/inv-stocvol/Sequential-IntSq-Postprocess.dill.hdf5Docs/source/auxiliary/inv-stocvol/Sequential-IntSq-Postprocess.dill.hdf5Docs/source/aux/xml/BODmap.xmlDocs/source/auxiliary/xml/BODmap.xmlDocs/source/auxiliary/inv-stocvol/Distribution.dillDocs/source/aux/inv-stocvol/Distribution.dillDocs/source/auxiliary/inv-stocvol/Sequential-IntSq-Postprocess.dillDocs/source/aux/inv-stocvol/Sequential-IntSq.dillDocs/source/aux/inv-stocvol/DistributionGeneration.pyDocs/source/auxiliary/xml/IntSqSecOrd.xmlDocs/source/aux/xml/LinearSpan.xmlDocs/source/auxiliary/inv-stocvol/DistributionGeneration.pyDocs/source/aux/xml/IntSqSecOrdHead.xmlDocs/source/auxiliary/xml/IntSqSecOrdHead.xmlc44169f008e6fcca71dfd5b37b973bafa4eef8c91571901058000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itrenamed aux for windows benefit... 2019-10-24 09:10:58 +0200c44169f008e6fcca71dfd5b37b973bafa4eef8c9renamed aux for windows benefit...addDocs/source/auxiliary/inv-stocvol/Sequential-IntSq-Postprocess.dilldeleteDocs/source/aux/inv-stocvol/Sequential-IntSq.dilldeleteDocs/source/aux/inv-stocvol/Sequential-IntSq-Postprocess.dill.hdf5addDocs/source/auxiliary/xml/BODmap.xmldeleteDocs/source/aux/xml/IntSqSecOrdHead.xmladdDocs/source/auxiliary/inv-stocvol/DistributionGeneration.pyaddDocs/source/auxiliary/xml/LinearSpan.xmldeleteDocs/source/aux/xml/IntSqSecOrd.xmladdDocs/source/auxiliary/xml/IntSqSecOrdHead.xmldeleteDocs/source/aux/inv-stocvol/Distribution.dilldeleteDocs/source/aux/inv-stocvol/Sequential-IntSq-Postprocess.dilldeleteDocs/source/aux/inv-stocvol/DistributionGeneration.pyaddDocs/source/auxiliary/inv-stocvol/Sequential-IntSq-Postprocess.dill.hdf5addDocs/source/auxiliary/inv-stocvol/Sequential-IntSq.dilldeleteDocs/source/aux/xml/BODmap.xmladdDocs/source/auxiliary/xml/IntSqSecOrd.xmldeleteDocs/source/aux/xml/LinearSpan.xmladdDocs/source/auxiliary/inv-stocvol/Distribution.dillExamples/research/MonotoneTransport-paper/IceThickness/aux.pyExamples/research/MonotoneTransport-paper/IceThickness/auxiliary.py5638d755066ffcecd79e104ab69a5e3b1077da341571903181000https://acdl.mit.edu/csi/user/dabidabidabi@limitcycle.itauxiliary.... 2019-10-24 09:46:21 +02005638d755066ffcecd79e104ab69a5e3b1077da34auxiliary....deleteExamples/research/MonotoneTransport-paper/IceThickness/aux.pyaddExamples/research/MonotoneTransport-paper/IceThickness/auxiliary.pygithttps://acdl.mit.edu/csi/user/rsbrsbhttps://acdl.mit.edu/csi/user/rebeccae.morrisonrebeccae.morrisonhttps://acdl.mit.edu/csi/user/dabidabi86https://acdl.mit.edu/csi/job/TransportMaps-private-develop/COMPILER=clang,MACHINE=reynolds,PYTHON_EXE=python2,VENV_SYS=virtualenv/86/86https://acdl.mit.edu/csi/job/TransportMaps-private-develop/COMPILER=clang,MACHINE=reynolds,PYTHON_EXE=python3,VENV_SYS=virtualenv/86/77https://acdl.mit.edu/csi/job/TransportMaps-private-develop/COMPILER=clang,MACHINE=reynolds,PYTHON_EXE=python3.4,VENV_SYS=virtualenv/77/77https://acdl.mit.edu/csi/job/TransportMaps-private-develop/COMPILER=clang,MACHINE=reynolds,PYTHON_EXE=python3.5,VENV_SYS=virtualenv/77/77https://acdl.mit.edu/csi/job/TransportMaps-private-develop/COMPILER=clang,MACHINE=reynolds,PYTHON_EXE=python3.6,VENV_SYS=virtualenv/77/77https://acdl.mit.edu/csi/job/TransportMaps-private-develop/COMPILER=clang,MACHINE=reynolds,PYTHON_EXE=python3.7,VENV_SYS=virtualenv/77/86https://acdl.mit.edu/csi/job/TransportMaps-private-develop/COMPILER=clang,MACHINE=reynolds-ubuntu14,PYTHON_EXE=python2,VENV_SYS=virtualenv/86/86https://acdl.mit.edu/csi/job/TransportMaps-private-develop/COMPILER=clang,MACHINE=reynolds-ubuntu14,PYTHON_EXE=python3,VENV_SYS=virtualenv/86/77https://acdl.mit.edu/csi/job/TransportMaps-private-develop/COMPILER=clang,MACHINE=reynolds-ubuntu14,PYTHON_EXE=python3.4,VENV_SYS=virtualenv/77/77https://acdl.mit.edu/csi/job/TransportMaps-private-develop/COMPILER=clang,MACHINE=reynolds-ubuntu14,PYTHON_EXE=python3.5,VENV_SYS=virtualenv/77/77https://acdl.mit.edu/csi/job/TransportMaps-private-develop/COMPILER=clang,MACHINE=reynolds-ubuntu14,PYTHON_EXE=python3.6,VENV_SYS=virtualenv/77/77https://acdl.mit.edu/csi/job/TransportMaps-private-develop/COMPILER=clang,MACHINE=reynolds-ubuntu14,PYTHON_EXE=python3.7,VENV_SYS=virtualenv/77/86https://acdl.mit.edu/csi/job/TransportMaps-private-develop/COMPILER=clang,MACHINE=reynolds-ubuntu18,PYTHON_EXE=python2,VENV_SYS=virtualenv/86/86https://acdl.mit.edu/csi/job/TransportMaps-private-develop/COMPILER=clang,MACHINE=reynolds-ubuntu18,PYTHON_EXE=python3,VENV_SYS=virtualenv/86/77https://acdl.mit.edu/csi/job/TransportMaps-private-develop/COMPILER=clang,MACHINE=reynolds-ubuntu18,PYTHON_EXE=python3.4,VENV_SYS=virtualenv/77/77https://acdl.mit.edu/csi/job/TransportMaps-private-develop/COMPILER=clang,MACHINE=reynolds-ubuntu18,PYTHON_EXE=python3.5,VENV_SYS=virtualenv/77/77https://acdl.mit.edu/csi/job/TransportMaps-private-develop/COMPILER=clang,MACHINE=reynolds-ubuntu18,PYTHON_EXE=python3.6,VENV_SYS=virtualenv/77/77https://acdl.mit.edu/csi/job/TransportMaps-private-develop/COMPILER=clang,MACHINE=reynolds-ubuntu18,PYTHON_EXE=python3.7,VENV_SYS=virtualenv/77/86https://acdl.mit.edu/csi/job/TransportMaps-private-develop/COMPILER=gcc,MACHINE=reynolds,PYTHON_EXE=python2,VENV_SYS=virtualenv/86/86https://acdl.mit.edu/csi/job/TransportMaps-private-develop/COMPILER=gcc,MACHINE=reynolds,PYTHON_EXE=python3,VENV_SYS=virtualenv/86/77https://acdl.mit.edu/csi/job/TransportMaps-private-develop/COMPILER=gcc,MACHINE=reynolds,PYTHON_EXE=python3.4,VENV_SYS=virtualenv/77/77https://acdl.mit.edu/csi/job/TransportMaps-private-develop/COMPILER=gcc,MACHINE=reynolds,PYTHON_EXE=python3.5,VENV_SYS=virtualenv/77/77https://acdl.mit.edu/csi/job/TransportMaps-private-develop/COMPILER=gcc,MACHINE=reynolds,PYTHON_EXE=python3.6,VENV_SYS=virtualenv/77/77https://acdl.mit.edu/csi/job/TransportMaps-private-develop/COMPILER=gcc,MACHINE=reynolds,PYTHON_EXE=python3.7,VENV_SYS=virtualenv/77/86https://acdl.mit.edu/csi/job/TransportMaps-private-develop/COMPILER=gcc,MACHINE=reynolds-ubuntu14,PYTHON_EXE=python2,VENV_SYS=virtualenv/86/86https://acdl.mit.edu/csi/job/TransportMaps-private-develop/COMPILER=gcc,MACHINE=reynolds-ubuntu14,PYTHON_EXE=python3,VENV_SYS=virtualenv/86/77https://acdl.mit.edu/csi/job/TransportMaps-private-develop/COMPILER=gcc,MACHINE=reynolds-ubuntu14,PYTHON_EXE=python3.4,VENV_SYS=virtualenv/77/77https://acdl.mit.edu/csi/job/TransportMaps-private-develop/COMPILER=gcc,MACHINE=reynolds-ubuntu14,PYTHON_EXE=python3.5,VENV_SYS=virtualenv/77/77https://acdl.mit.edu/csi/job/TransportMaps-private-develop/COMPILER=gcc,MACHINE=reynolds-ubuntu14,PYTHON_EXE=python3.6,VENV_SYS=virtualenv/77/77https://acdl.mit.edu/csi/job/TransportMaps-private-develop/COMPILER=gcc,MACHINE=reynolds-ubuntu14,PYTHON_EXE=python3.7,VENV_SYS=virtualenv/77/86https://acdl.mit.edu/csi/job/TransportMaps-private-develop/COMPILER=gcc,MACHINE=reynolds-ubuntu18,PYTHON_EXE=python2,VENV_SYS=virtualenv/86/86https://acdl.mit.edu/csi/job/TransportMaps-private-develop/COMPILER=gcc,MACHINE=reynolds-ubuntu18,PYTHON_EXE=python3,VENV_SYS=virtualenv/86/77https://acdl.mit.edu/csi/job/TransportMaps-private-develop/COMPILER=gcc,MACHINE=reynolds-ubuntu18,PYTHON_EXE=python3.4,VENV_SYS=virtualenv/77/77https://acdl.mit.edu/csi/job/TransportMaps-private-develop/COMPILER=gcc,MACHINE=reynolds-ubuntu18,PYTHON_EXE=python3.5,VENV_SYS=virtualenv/77/77https://acdl.mit.edu/csi/job/TransportMaps-private-develop/COMPILER=gcc,MACHINE=reynolds-ubuntu18,PYTHON_EXE=python3.6,VENV_SYS=virtualenv/77/77https://acdl.mit.edu/csi/job/TransportMaps-private-develop/COMPILER=gcc,MACHINE=reynolds-ubuntu18,PYTHON_EXE=python3.7,VENV_SYS=virtualenv/77/