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Started by upstream project "TransportMaps-pypi" build number 161 originally caused by: [URLTrigger] A change within the response URL invocation (log) Running as SYSTEM [EnvInject] - Loading node environment variables. Building remotely on reynolds in workspace /jenkins/workspace/TransportMaps-pypi/COMPILER/gcc/MACHINE/reynolds/PYTHON_EXE/python3/VENV_SYS/virtualenv [WS-CLEANUP] Deleting project workspace... [WS-CLEANUP] Deferred wipeout is used... [GitCheckoutListener] SCM 'hudson.scm.NullSCM' is not of type GitSCM [virtualenv] $ /bin/bash -ex /tmp/jenkins14713139762598263622.sh + tar -x + git archive --remote=git@bitbucket.org:dabi86/transportmaps.git HEAD:jenkins/ test-pypi.sh + ./test-pypi.sh created virtual environment CPython3.10.6.final.0-64 in 136ms creator CPython3Posix(dest=/jenkins/workspace/TransportMaps-pypi/COMPILER/gcc/MACHINE/reynolds/PYTHON_EXE/python3/VENV_SYS/virtualenv/venv_TransportMaps-pypi_python3, clear=False, no_vcs_ignore=False, global=False) seeder FromAppData(download=False, pip=bundle, setuptools=bundle, wheel=bundle, via=copy, app_data_dir=/home/jenkins/.local/share/virtualenv) added seed packages: pip==22.0.2, setuptools==59.6.0, wheel==0.37.1 activators BashActivator,CShellActivator,FishActivator,NushellActivator,PowerShellActivator,PythonActivator TEST_NAME: TransportMaps-pypi HOSTNAME: reynolds PATH: /jenkins/workspace/TransportMaps-pypi/COMPILER/gcc/MACHINE/reynolds/PYTHON_EXE/python3/VENV_SYS/virtualenv/venv_TransportMaps-pypi_python3/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin:/home/jenkins/bin:/home/jenkins/.local/bin VENV_OPTS: PATH: /jenkins/workspace/TransportMaps-pypi/COMPILER/gcc/MACHINE/reynolds/PYTHON_EXE/python3/VENV_SYS/virtualenv/venv_TransportMaps-pypi_python3/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin:/home/jenkins/bin:/home/jenkins/.local/bin PY-VERS: Python 3.10.6 Upgrading pip Requirement already satisfied: pip in /jenkins/workspace/TransportMaps-pypi/COMPILER/gcc/MACHINE/reynolds/PYTHON_EXE/python3/VENV_SYS/virtualenv/venv_TransportMaps-pypi_python3/lib/python3.10/site-packages (22.0.2) Collecting pip Using cached pip-23.0.1-py3-none-any.whl (2.1 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.0.2 Uninstalling pip-22.0.2: Successfully uninstalled pip-22.0.2 Successfully installed pip-23.0.1 Installing numpy Collecting numpy Using cached numpy-1.24.2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (17.3 MB) Installing collected packages: numpy Successfully installed numpy-1.24.2 Installing cython Collecting cython Using cached Cython-0.29.33-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (1.9 MB) Installing collected packages: cython Successfully installed cython-0.29.33 Installing TransportMaps Collecting TransportMaps Using cached transportmaps-3.0.5-py3-none-any.whl (555 kB) Collecting SpectralToolbox>=1.0.7 Using cached spectraltoolbox-2.0.3-cp310-cp310-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl (109 kB) Collecting semilattices>=1.0 Using cached semilattices-1.0.1-py3-none-any.whl (78 kB) Collecting sortedcontainers Using cached sortedcontainers-2.4.0-py2.py3-none-any.whl (29 kB) Collecting mpi-map>=2.5 Using cached mpi_map-2.6-py3-none-any.whl (37 kB) Collecting fasteners Using cached fasteners-0.18-py3-none-any.whl (18 kB) Collecting scipy Using cached scipy-1.10.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (34.4 MB) Collecting h5py Using cached h5py-3.8.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (4.6 MB) Collecting pyhmc Using cached pyhmc-0.1.2-cp310-cp310-linux_x86_64.whl Collecting tqdm Using cached tqdm-4.65.0-py3-none-any.whl (77 kB) Collecting orthpol-light>=1.0.1 Using cached orthpol_light-2.0.2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_28_x86_64.whl (24 kB) Collecting click Using cached click-8.1.3-py3-none-any.whl (96 kB) Collecting scikit-learn Using cached scikit_learn-1.2.2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (9.6 MB) Collecting mpi4py Using cached mpi4py-3.1.4-cp310-cp310-linux_x86_64.whl Collecting matplotlib Using cached matplotlib-3.7.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (11.6 MB) Requirement already satisfied: numpy>=1.15 in /jenkins/workspace/TransportMaps-pypi/COMPILER/gcc/MACHINE/reynolds/PYTHON_EXE/python3/VENV_SYS/virtualenv/venv_TransportMaps-pypi_python3/lib/python3.10/site-packages (from TransportMaps) (1.24.2) Collecting dill Using cached dill-0.3.6-py3-none-any.whl (110 kB) Collecting importlib-metadata Using cached importlib_metadata-6.1.0-py3-none-any.whl (21 kB) Collecting six Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Collecting pillow>=6.2.0 Using cached Pillow-9.4.0-cp310-cp310-manylinux_2_28_x86_64.whl (3.4 MB) Collecting cycler>=0.10 Using cached cycler-0.11.0-py3-none-any.whl (6.4 kB) Collecting fonttools>=4.22.0 Using cached fonttools-4.39.2-py3-none-any.whl (1.0 MB) Collecting packaging>=20.0 Using cached packaging-23.0-py3-none-any.whl (42 kB) Collecting kiwisolver>=1.0.1 Using cached kiwisolver-1.4.4-cp310-cp310-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (1.6 MB) Collecting contourpy>=1.0.1 Using cached contourpy-1.0.7-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (300 kB) Collecting pyparsing>=2.3.1 Using cached pyparsing-3.0.9-py3-none-any.whl (98 kB) Collecting python-dateutil>=2.7 Using cached python_dateutil-2.8.2-py2.py3-none-any.whl (247 kB) Collecting joblib>=1.1.1 Using cached joblib-1.2.0-py3-none-any.whl (297 kB) Collecting threadpoolctl>=2.0.0 Using cached threadpoolctl-3.1.0-py3-none-any.whl (14 kB) Collecting zipp>=0.5 Using cached zipp-3.15.0-py3-none-any.whl (6.8 kB) Installing collected packages: sortedcontainers, zipp, tqdm, threadpoolctl, six, scipy, pyparsing, pyhmc, pillow, packaging, orthpol-light, mpi4py, kiwisolver, joblib, h5py, fonttools, fasteners, dill, cycler, contourpy, click, SpectralToolbox, scikit-learn, python-dateutil, mpi-map, importlib-metadata, semilattices, matplotlib, TransportMaps Successfully installed SpectralToolbox-2.0.3 TransportMaps-3.0.5 click-8.1.3 contourpy-1.0.7 cycler-0.11.0 dill-0.3.6 fasteners-0.18 fonttools-4.39.2 h5py-3.8.0 importlib-metadata-6.1.0 joblib-1.2.0 kiwisolver-1.4.4 matplotlib-3.7.1 mpi-map-2.6 mpi4py-3.1.4 orthpol-light-2.0.2 packaging-23.0 pillow-9.4.0 pyhmc-0.1.2 pyparsing-3.0.9 python-dateutil-2.8.2 scikit-learn-1.2.2 scipy-1.10.1 semilattices-1.0.1 six-1.16.0 sortedcontainers-2.4.0 threadpoolctl-3.1.0 tqdm-4.65.0 zipp-3.15.0 Running tests Authorization required, but no authorization protocol specified Authorization required, but no authorization protocol specified Authorization required, but no authorization protocol specified /jenkins/workspace/TransportMaps-pypi/COMPILER/gcc/MACHINE/reynolds/PYTHON_EXE/python3/VENV_SYS/virtualenv/venv_TransportMaps-pypi_python3/lib/python3.10/site-packages/TransportMaps/__init__.py:148: UserWarning: Re-linking to SpectralToolbox. This is done every time a new version of either SpectralToolbox or TransportMaps are updated. warnings.warn("Re-linking to SpectralToolbox. " + \ Traceback (most recent call last): File "/usr/lib/python3.10/runpy.py", line 196, in _run_module_as_main return _run_code(code, main_globals, None, File "/usr/lib/python3.10/runpy.py", line 86, in _run_code exec(code, run_globals) File "/usr/lib/python3.10/unittest/__main__.py", line 18, in <module> main(module=None) File "/usr/lib/python3.10/unittest/main.py", line 100, in __init__ self.parseArgs(argv) File "/usr/lib/python3.10/unittest/main.py", line 147, in parseArgs self.createTests() File "/usr/lib/python3.10/unittest/main.py", line 158, in createTests self.test = self.testLoader.loadTestsFromNames(self.testNames, File "/usr/lib/python3.10/unittest/loader.py", line 220, in loadTestsFromNames suites = [self.loadTestsFromName(name, module) for name in names] File "/usr/lib/python3.10/unittest/loader.py", line 220, in <listcomp> suites = [self.loadTestsFromName(name, module) for name in names] File "/usr/lib/python3.10/unittest/loader.py", line 154, in loadTestsFromName module = __import__(module_name) File "/jenkins/workspace/TransportMaps-pypi/COMPILER/gcc/MACHINE/reynolds/PYTHON_EXE/python3/VENV_SYS/virtualenv/venv_TransportMaps-pypi_python3/lib/python3.10/site-packages/TransportMaps/__init__.py", line 155, in <module> linking() File "/jenkins/workspace/TransportMaps-pypi/COMPILER/gcc/MACHINE/reynolds/PYTHON_EXE/python3/VENV_SYS/virtualenv/venv_TransportMaps-pypi_python3/lib/python3.10/site-packages/TransportMaps/__init__.py", line 153, in linking os.symlink(s1d_dir + '/XML/schema/basis.xsd', FileNotFoundError: [Errno 2] No such file or directory: '/jenkins/workspace/TransportMaps-pypi/COMPILER/gcc/MACHINE/reynolds/PYTHON_EXE/python3/VENV_SYS/virtualenv/venv_TransportMaps-pypi_python3/lib/python3.10/site-packages/SpectralToolbox/Spectral1D/XML/schema/basis.xsd' -> '/jenkins/workspace/TransportMaps-pypi/COMPILER/gcc/MACHINE/reynolds/PYTHON_EXE/python3/VENV_SYS/virtualenv/venv_TransportMaps-pypi_python3/lib/python3.10/site-packages/TransportMaps/XML/schema/basis.xsd' Build step 'Execute shell' marked build as failure Sending e-mails to: tmteam-dev@mit.edu [WS-CLEANUP] Deleting project workspace... [WS-CLEANUP] Skipped based on build state FAILURE Finished: FAILURE