Started by upstream project "avro_commit" build number 391 originally caused by: Started by GitLab push by Philip Running as SYSTEM [EnvInject] - Loading node environment variables. Building remotely on reynolds in workspace /jenkins/workspace/avro_commit/builddir/release_gnu6/buildnode/reynolds using credential 3614a4cf-01de-4393-97de-73734b7dd5a2 > git rev-parse --is-inside-work-tree # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url git@gitlab.com:philipclaude/avro.git # timeout=10 Pruning obsolete local branches Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 Fetching upstream changes from git@gitlab.com:philipclaude/avro.git > git --version # timeout=10 using GIT_SSH to set credentials > git fetch --tags --progress --prune git@gitlab.com:philipclaude/avro.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 5406a94c463acec854c6ae3d4132f42c50702691 (origin/master) > git config core.sparsecheckout # timeout=10 > git checkout -f 5406a94c463acec854c6ae3d4132f42c50702691 # timeout=10 Commit message: "Merge branch 'philip' into 'master'" > git rev-list --no-walk c3154206e0937767a66651742eb8d460b42958ce # timeout=10 [reynolds] $ /bin/bash -xe /tmp/jenkins5204506055063050285.sh + /bin/bash -ex /jenkins/workspace/avro_commit/builddir/release_gnu6/buildnode/reynolds/util/jenkins/commit.sh + cd /jenkins/workspace/avro_commit/builddir/release_gnu6/buildnode/reynolds + echo 'Removing any lingering untracked files' Removing any lingering untracked files ++ git ls-files --others --exclude-standard + [[ release_gnu6 == *\c\o\v\e\r\a\g\e* ]] + cmakedir=/jenkins/workspace/avro_commit/builddir/release_gnu6/buildnode/reynolds/build/release_gnu6 + mkdir -p /jenkins/workspace/avro_commit/builddir/release_gnu6/buildnode/reynolds/build/release_gnu6 + cd /jenkins/workspace/avro_commit/builddir/release_gnu6/buildnode/reynolds/build/release_gnu6 + rm -rf '/jenkins/workspace/avro_commit/builddir/release_gnu6/buildnode/reynolds/test/*.dat' + rm -rf '/jenkins/workspace/avro_commit/builddir/release_gnu6/buildnode/reynolds/text/*.mesh' + rm -f /jenkins/workspace/avro_commit/builddir/release_gnu6/buildnode/reynolds/build/coverage.xml + [[ release_gnu6 == *\c\o\v\e\r\a\g\e* ]] + CMAKE_ARGS= + [[ release_gnu6 == *\m\e\m\c\h\e\c\k* ]] + [[ release_gnu6 == *\g\n\u\4\8* ]] + source /jenkins/workspace/avro_commit/builddir/release_gnu6/buildnode/reynolds/util/jenkins/configure.sh +++ git rev-parse --show-toplevel ++ WORKSPACE=/jenkins/workspace/avro_commit/builddir/release_gnu6/buildnode/reynolds ++ source /jenkins/workspace/avro_commit/builddir/release_gnu6/buildnode/reynolds/util/jenkins/environment.sh +++ shopt -s nocasematch ++++ pwd +++ dir=/jenkins/workspace/avro_commit/builddir/release_gnu6/buildnode/reynolds/build/release_gnu6 ++++ basename /jenkins/workspace/avro_commit/builddir/release_gnu6/buildnode/reynolds/build/release_gnu6 +++ builddir=release_gnu6 ++++ hostname +++ [[ reynolds == *\r\e\y\n\o\l\d\s* ]] +++ [[ release_gnu6 == *\i\n\t\e\l\1\4* ]] +++ [[ release_gnu6 == *\i\n\t\e\l\1\5* ]] +++ [[ release_gnu6 == *\i\n\t\e\l\1\7* ]] +++ [[ release_gnu6 == *\i\n\t\e\l\1\8* ]] +++ export PATH=/usr/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games +++ PATH=/usr/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games +++ export LD_LIBRARY_PATH=/usr/lib: +++ LD_LIBRARY_PATH=/usr/lib: +++ export LAPACK_DIR=/home/jenkins/util/lapack/lapack-3.6.1/install +++ LAPACK_DIR=/home/jenkins/util/lapack/lapack-3.6.1/install +++ export ESP_DIR=/home/jenkins/util/ESP/EngSketchPad +++ ESP_DIR=/home/jenkins/util/ESP/EngSketchPad +++ export CAS_DIR=/home/jenkins/util/ESP/OpenCASCADE-6.8.1 +++ CAS_DIR=/home/jenkins/util/ESP/OpenCASCADE-6.8.1 +++ export PARMETIS_DIR=/home/jenkins/util/parmetis/parmetis-4.0.3/install +++ PARMETIS_DIR=/home/jenkins/util/parmetis/parmetis-4.0.3/install +++ export METIS_DIR=/home/jenkins/util/parmetis/metis-5.1.0/install +++ METIS_DIR=/home/jenkins/util/parmetis/metis-5.1.0/install +++ export PATH=/home/jenkins/util/lcov/lcov-1.13/bin:/usr/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games +++ PATH=/home/jenkins/util/lcov/lcov-1.13/bin:/usr/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games +++ export PATH=/home/jenkins/util/fefloa/bin:/home/jenkins/util/lcov/lcov-1.13/bin:/usr/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games +++ PATH=/home/jenkins/util/fefloa/bin:/home/jenkins/util/lcov/lcov-1.13/bin:/usr/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games ++++ hostname +++ [[ reynolds == *\c\e\n\t\O\S* ]] +++ env +++ hostname ++ [[ reynolds == *\m\a\c\y\s* ]] ++ cmake -DAVRO_WITH_MPI=ON /jenkins/workspace/avro_commit/builddir/release_gnu6/buildnode/reynolds -- Build type = release -- The C compiler identification is GNU 6.5.0 -- The CXX compiler identification is GNU 6.5.0 -- Check for working C compiler: /usr/bin/gcc-6 -- Check for working C compiler: /usr/bin/gcc-6 -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/g++-6 -- Check for working CXX compiler: /usr/bin/g++-6 -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found PkgConfig: /usr/bin/pkg-config (found version "0.29.1") -- Found NLOPT: /usr/lib/x86_64-linux-gnu/libnlopt.so -- Found MPI_C: /usr/lib/openmpi/lib/libmpi.so -- Found MPI_CXX: /usr/lib/openmpi/lib/libmpi_cxx.so;/usr/lib/openmpi/lib/libmpi.so -- MPI not found -- Found PARMETIS: /usr/lib/libparmetis.so -- Setting gnu compiler flags -- using internal smart pointers since not cpp11 (shared_ptr) -- Try OpenMP C flag = [-fopenmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Success -- Try OpenMP CXX flag = [-fopenmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Success -- Found OpenMP: -fopenmp -- CPU thread manager = c++11. -- GPU threading not enabled. GPU thread manager = serial. -- Please install kcachegrind for graphical profiling. -- Please install massif-visualizer for graphical heap memory usage. -- Configuring done -- Generating done -- Build files have been written to: /jenkins/workspace/avro_commit/builddir/release_gnu6/buildnode/reynolds/build/release_gnu6 real 0m2.659s user 0m1.584s sys 0m0.548s + nproc=1 + [[ release_gnu6 == *\c\o\v\e\r\a\g\e* ]] + make -j 1 Scanning dependencies of target avro_third_party [ 0%] Building CXX object src/third_party/CMakeFiles/avro_third_party.dir/tetgen1.5.0/predicates.cxx.o [ 0%] Building CXX object src/third_party/CMakeFiles/avro_third_party.dir/tetgen1.5.0/tetgen.cxx.o Build was aborted [WARNINGS] Skipping publisher since build result is ABORTED [Cobertura] Skipping Cobertura coverage report as build was not FAILURE or better ... [PostBuildScript] - [INFO] Executing post build scripts. [PostBuildScript] - [INFO] build step #0 should only be executed on MATRIX Finished: ABORTED