Started by user galbramc Running as galbramc [EnvInject] - Loading node environment variables. Building remotely on reynolds in workspace /jenkins/workspace/SANS_refine [WS-CLEANUP] Deleting project workspace... [WS-CLEANUP] Done The recommended git tool is: NONE using credential 3614a4cf-01de-4393-97de-73734b7dd5a2 Fetching changes from the remote Git repository Pruning obsolete local branches Cleaning workspace > JGit fetch # timeout=10 Verifying host key for acdl.mit.edu using /home/jenkins/.ssh/known_hosts Checking out Revision 7703a5c9acdbbb354401b3c215366efa633ab577 (acdl/develop) Commit message: "More SA-R updates" The recommended git tool is: NONE using credential 3614a4cf-01de-4393-97de-73734b7dd5a2 The recommended git tool is: NONE using credential 3614a4cf-01de-4393-97de-73734b7dd5a2 [GitCheckoutListener] Recording commits of 'git ssh://jenkins@acdl.mit.edu/home/svnroot/SANSproto/' [GitCheckoutListener] Found previous build 'SANS_refine #119' that contains recorded Git commits [GitCheckoutListener] -> Starting recording of new commits since 'ab8ee4f' [GitCheckoutListener] -> Using head commit '7703a5c' as starting point [GitCheckoutListener] -> Git commit decorator could not be created for SCM 'hudson.plugins.git.GitSCM@22ba45d3' [GitCheckoutListener] -> Recorded 200 new commits No emails were triggered. Triggering SANS_refine » release_gnu11,reynolds Triggering SANS_refine » release_clang,reynolds Triggering SANS_refine » release_gnu9,reynolds Triggering SANS_refine » release_gnu10,reynolds Triggering SANS_refine » release_intel,reynolds SANS_refine » release_gnu11,reynolds completed with result FAILURE SANS_refine » release_clang,reynolds completed with result FAILURE SANS_refine » release_gnu9,reynolds completed with result FAILURE SANS_refine » release_gnu10,reynolds completed with result FAILURE SANS_refine » release_intel,reynolds completed with result FAILURE Email was triggered for: Failure - Any Sending email for trigger: Failure - Any Failed to create e-mail address for SANS_refine
BUILD FAILURE
Build URL https://acdl.mit.edu/csi/job/SANS_refine/120/
Project: SANS_refine
Date of build: Thu, 01 Sep 2022 15:29:00 -0400
Build duration: 36 min and counting
Build cause: Started by user galbramc
Built on: reynolds

Changes

added 3D entropy variables for Euler/NS

by allmaras

edit src/pde/NS/CMakeLists.txt
add test/unit/pde/NS/Q3DEntropy_btest.cpp
add src/pde/NS/Q3DEntropy.cpp
add src/pde/NS/Q3DEntropy.h
add test/unit/IO/pde/NS/Q3DEntropy_pattern.txt

flipped output_stream flag to true (thought this was down with last commit, but not)

by allmaras

edit test/unit/pde/NS/Q3DEntropy_btest.cpp

unit tests for Robin_sansLG BCs for 3D NS

by allmaras

add test/unit/pde/NS/BCNavierStokes3D_Robin_sansLG_btest.cpp
edit src/pde/NS/BCNavierStokes3D_Robin_sansLG.h

removed const reference for interior trace groups member data and made it a copy,

by allmaras

edit src/Discretization/Galerkin/IntegrandInteriorTrace_SIP_Galerkin.h

added option to return success flag if max number of iterations are reached without converging,

by allmaras

edit src/SolutionTrek/Continuation/PseudoTime/PseudoTime.cpp
edit src/SolutionTrek/Continuation/PseudoTime/PseudoTime.h

added interface for derivedSurfaceQuantity with parameter

by allmaras

edit src/pde/NS/PDEEuler2D.h

typo fixes in Pointwise tcl script

by allmaras

edit src/Meshing/Pointwise/MesherInterface_Pointwise.cpp

modified (solution error)^2 to use dot product, now allows general ArrayQ<,T>, solution

by allmaras

add test/unit/pde/OutputCell_SolutionErrorSquared_btest.cpp
edit src/pde/OutputCell_SolutionErrorSquared.h

mod: VectorFunction ->, ArrayFunction

by allmaras

edit test/unit/pde/OutputCell_SolutionErrorSquared_btest.cpp

inviscid Joukowski with interface to Pointwise

by allmaras

add test/sandbox/Adapt2D_DGAdvective_Euler_Joukowski_Pointwise_toy.cpp

fixed lines that were too long

by allmaras

edit src/Discretization/Potential_Adjoint/IntegrandBoundaryTrace_WakeCut_CG_FP_Virtual.h

fixed promote_Surreal bug (only showed up for USE_GRID_LAPLACIAN)

by allmaras

edit src/pde/AdvectionDiffusion/PDEAdvectionDiffusion2D.h

Vector ->, Array fix to be consistent with new Array*Function nomenclature

by allmaras

edit test/unit/pde/OutputCell_SolutionErrorSquared_btest.cpp

added Array2Function2D class (2-component, each an analytic function) with unit test,

by allmaras

edit src/pde/AnalyticFunction/ArrayFunction2D.h
edit test/unit/pde/AnalyticFunction/ArrayFunction2D_btest.cpp

added PyDict options for xz and yz angle offsets for 3D corner singularity

by allmaras

edit src/pde/AnalyticFunction/ScalarFunction3D.h

Fixes for running Joukowski with avro and refine

by galbramc

add test/sandbox/grids/Joukowski_Mesh/cgns.py
add test/sandbox/grids/Joukowski_Mesh/joukowski.egads
add test/sandbox/grids/Joukowski_Mesh/ugrid.py
add test/sandbox/grids/Joukowski_Mesh/curve.py
add test/sandbox/grids/Joukowski_Mesh/ebg.py
add test/sandbox/grids/Joukowski_Mesh/geo.py
add test/sandbox/grids/Joukowski_Mesh/csm.py
add test/sandbox/grids/Joukowski_Mesh/plot3d.py
add test/sandbox/grids/Joukowski_Mesh/Classic.py
add test/sandbox/grids/Joukowski_Mesh/Joukowski_RANS.py
add test/sandbox/grids/Joukowski_Mesh/Challenge.py
add test/sandbox/grids/Joukowski_Mesh/grm.py
add test/sandbox/grids/Joukowski_Mesh/pg2d.py
add test/sandbox/grids/Joukowski_Mesh/writer.py
add test/sandbox/grids/Joukowski_Mesh/fec.py
add test/sandbox/grids/Joukowski_Mesh/vtk.py
edit src/Discretization/Potential_Adjoint/IntegrandBoundaryTrace_WakeCut_CG_FP_Virtual.h
add test/sandbox/grids/Joukowski_Mesh/gmsh.py
edit test/sandbox/Adapt2D_DGAdvective_Euler_Joukowski_Pointwise_toy.cpp

1st shot at cylindrical/axisymmetric, added template Axes to all ElementXField* classes

by allmaras

edit test/unit/Field/Element/ElementXFieldAreaBase_Triangle_btest.cpp
edit src/Field/DistanceFunction/DistanceFunction.cpp
edit src/Field/Element/ElementXFieldArea_impl.h
edit src/Field/Element/ElementProjection_Specialization_L2.h
edit src/Field/XField.h
edit test/unit/Field/Element/CMakeLists.txt
edit test/unit/Field/Element/ElementXFieldSpacetime_Pentatope_btest.cpp
edit test/unit/Field/Element/RefCoordSolver_btest.cpp
edit test/unit/Field/Element/ElementXFieldAreaBase_Quad_btest.cpp
edit src/Field/XFieldLine_Instantiate_2D.cpp
edit src/Field/Element/ElementXFieldSpacetime.h
edit src/Field/Element/ElementXFieldVolume.h
edit src/Field/Element/ElementIntegral.h
edit src/Field/XField_checkTraceNormal_impl.h
edit src/Field/XFieldSpacetime_Traits.h
edit src/Field/Element/ElementProjection_L2.h
edit src/Field/XFieldLine_Traits.h
edit src/Field/XFieldNode_Traits.h
edit src/Field/Element/RefCoordSolver.h
edit test/unit/Field/Element/ElementXFieldVolume_Tetrahedron_btest.cpp
edit test/unit/Field/Element/ElementXFieldLine_1D_btest.cpp
edit test/unit/Field/Element/ElementXFieldArea_2D_Triangle_btest.cpp
edit test/unit/Field/Element/ElementXFieldLine_2D_btest.cpp
edit src/Field/Element/ElementXFieldNode.h
edit src/Field/Element/ElementXFieldLine_Instantiate_2D.cpp
edit src/Field/ElementCounter.h
edit src/Field/XFieldArea_Instantiate_3D.cpp
edit src/Field/Element/ElementInterpolation_Nodal.h
edit test/unit/Field/Element/ElementXFieldVolume_4D_Tetrahedron_btest.cpp
edit test/unit/Field/Element/ElementXFieldVolume_Hexahedron_btest.cpp
edit src/Field/DistanceFunction/DistanceFunctionGradient.cpp
edit src/Field/Element/ElementXFieldLine.h
edit src/Field/Element/Element.h
edit src/Field/Element/ElementalMassMatrix.h
edit src/Field/Element/GalerkinWeightedIntegral_New.h
edit src/Field/Element/TraceUnitNormal.h
edit src/Field/Element/GalerkinWeightedIntegral.h
edit src/Field/Element/ElementXFieldSpacetime_impl.h
edit src/Field/CMakeLists.txt
edit src/Field/Element/ElementXFieldVolume_impl.h
edit src/Field/XFieldArea_Traits.h
edit src/Field/Element/ElementXFieldArea.h
edit src/Field/DistanceFunction/DistanceFunction3D.cpp
add src/Field/Element/CMakeLists.txt
edit src/Field/XFieldVolume_Traits.h
add src/Field/Element/ElementXFieldLine_Instantiate_2D_Cartesian.cpp
edit test/unit/Field/Element/ElementXFieldArea_2D_Quad_btest.cpp
edit src/Field/Element/RefCoordSolver.cpp

bug fix

by allmaras

edit test/unit/Field/Element/ElementXFieldArea_2D_Triangle_btest.cpp

completed Field/Element subdirectory, unit tests all pass, commented out 2 curvilinear

by allmaras

edit test/unit/Field/Element/ElementIntegral_Functional_btest.cpp
edit test/unit/Field/Element/ElementXFieldArea_3D_Triangle_btest.cpp
edit src/Field/Tuple/ElementTuple.h
edit src/Field/Element/ElementXFieldArea_Instantiate_3D_Cartesian.cpp
edit test/unit/Field/Element/ElementTuple_btest.cpp
edit test/unit/Field/Element/ElementXFieldSpacetime_Pentatope_btest.cpp
edit src/Field/Element/ElementXFieldLine_impl.h
edit src/Field/Element/ElementXFieldArea_impl.h
edit test/unit/Field/Element/ElementXFieldArea_3D_Quad_btest.cpp
edit src/Field/Element/ElementXFieldArea_Instantiate_2D_Cartesian.cpp
edit test/unit/Field/Element/ElementXFieldVolume_Tetrahedron_btest.cpp
edit test/unit/Field/Element/ElementProjection_L2_Triangle_btest.cpp
edit src/Field/Element/RefCoordSolver.cpp
edit src/Field/Element/ElementXFieldVolume_Instantiate_4D_Cartesian.cpp
edit src/Field/Element/ElementXFieldSpacetime_Instantiate_4D_Cartesian.cpp
edit src/Field/Element/ElementXFieldVolume_Instantiate_3D_Cartesian.cpp
edit src/Field/Element/ElementXFieldArea.h
edit test/unit/Field/Element/ElementXFieldLineBase_btest.cpp
edit test/unit/Field/Element/ElementProjection_L2_Tet_btest.cpp
edit test/unit/Field/Element/ElementProjection_Specialization_L2_Triangle_btest.cpp
edit test/unit/Field/Element/ElementXFieldArea_2D_Quad_btest.cpp
edit test/unit/Field/Element/ElementProjection_L2_Line_btest.cpp
edit src/Field/XFieldAssociativity.h
edit src/Field/Element/CMakeLists.txt
edit test/unit/Field/Element/ElementXFieldVolume_4D_Tetrahedron_btest.cpp

refactor Field directory, creating Field_DG, Field_EG, XField subdirectories,

by allmaras

edit src/Field/Field_NodalView_Volume.cpp
edit src/Discretization/Galerkin/IntegrandBoundaryTrace_LinearScalar_sansLG_Galerkin.h
edit src/Field/FieldArea_Instantiate_3D.cpp
edit src/Discretization/Galerkin/IntegrandCell_ProjectFunction.h
edit src/Discretization/Galerkin/FunctionalCell_Galerkin.h
edit src/Discretization/Galerkin/IntegrandCell_Galerkin_StrongForm.h
edit src/Field/DistanceFunction/DistanceFunction3D.cpp
edit src/Field/Local/XField_LocalPatchBase/XField_LocalPatchBase_Line.cpp
edit src/Discretization/DG/IntegrandBoundaryTrace_Output_DGBR2.h
edit src/Discretization/Galerkin/IntegrandCell_Galerkin_CutCellTransitionIBL.h
edit src/Field/Local/XField_Local_Base.h
edit src/Discretization/Galerkin/IntegrandCell_Galerkin.h
edit src/Discretization/Galerkin/JacobianFunctionalCell_Galerkin.h
edit src/Discretization/IntegrateCellGroups.h
edit src/Field/Field_NodalView_Area.cpp
edit src/Discretization/Galerkin/IntegrandBoundaryTrace_None_Galerkin_manifold_IBL3D.h
edit src/Field/Local/XField_LocalPatchConstructor/XField_LocalPatchConstructor_Spacetime.cpp
edit src/Discretization/Galerkin/IntegrandBoundaryTrace_LinearScalar_mitLG_Galerkin.h
edit src/Discretization/Galerkin/IntegrandInteriorTrace_Galerkin_manifold_IBL3D.h
edit src/Discretization/Galerkin/IntegrandBoundaryTrace_Dirichlet_mitLG_Galerkin.h
edit src/Field/Local/XField_LocalPatchConstructor/XField_LocalPatchConstructor_Area.cpp
edit test/unit/Field/DistanceFunction_btest.cpp
edit src/Discretization/AlgebraicEquationSet_Debug.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Galerkin.h
edit src/Field/output_Tecplot/output_Tecplot_RotorSource.cpp
edit src/Field/output_Tecplot/output_Tecplot_Area_3D.cpp
edit src/Field/output_Tecplot/output_Tecplot_MetricLine.cpp
edit src/Field/FieldLinesearch/FieldLinesearch_Volume.h
edit src/Discretization/Galerkin/IntegrandCell_Galerkin_Stabilized.h
edit src/Discretization/Galerkin/IntegrandCell_Galerkin_Stabilized_Corrected.h
edit src/Field/HField/GenHFieldLine_CG.h
edit src/Field/HField/GenHField_CG/GenHField_CG_Area.cpp
edit src/Discretization/Galerkin/IntegrandCell_Galerkin_HSM2D.h
edit src/Field/output_Tecplot/output_Tecplot_LIP.cpp
edit src/Field/output_Tecplot/output_Tecplot_LiftLine.cpp
edit src/Field/HField/HField_CG/HField_CG_Volume.cpp
edit test/unit/Field/FieldDataMatrixD_TraceLift_btest.cpp
edit src/Field/FieldSpacetime_Instantiate_4D.cpp
edit src/Discretization/Galerkin/IntegrandBoundaryTrace_None_Galerkin.h
edit src/Field/HField/HFieldSpacetime_DG.h
edit src/Field/ProjectSoln/Project_DG_to_CG/Project_DG_to_CG_2D.cpp
edit src/Discretization/Galerkin/IntegrandBoundaryTrace_Flux_mitState_Galerkin_manifold.h
edit src/Discretization/Galerkin/IntegrandCell_Galerkin_Conservative.h
edit test/unit/Field/Element/ElementIntegral_Functional_btest.cpp
edit src/Discretization/DG/IntegrandBoundaryTrace_OutputWeightRsd_DGBR2.h
edit src/Field/Local/XField_LocalPatch/XField_LocalPatch_Line.cpp
edit src/Field/ProjectSoln/Project_DG_to_CG/Project_DG_to_CG_1D.cpp
edit src/Discretization/Galerkin/IntegrandInteriorTrace_Galerkin_StrongForm.h
edit src/Field/HField/GenHField_DG/GenHField_DG_Volume.cpp
edit src/Field/Local/XField_LocalPatch/XField_LocalPatch_impl.h
edit src/Discretization/Galerkin/IntegrandCell_Galerkin_IRS.h
edit src/Field/Local/XField_LocalPatchBase/XField_LocalPatchBase_Area.cpp
edit src/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_Stabilized_LiftedBoundary.h
edit src/Field/CMakeLists.txt
edit src/Field/output_Tecplot/output_Tecplot_Metric.cpp
edit test/unit/Field/Field3D_HDG_btest.cpp
edit src/Field/Local/XField_LocalPatch/XField_LocalPatch_Volume.cpp
edit src/Field/Local/XField_LocalPatch/XField_LocalPatch_Spacetime.cpp
edit src/Field/FieldGroupSpacetime_Traits.h
edit test/unit/Field/FieldDataInvMassMatrix_Cell_btest.cpp
edit src/Field/FieldVolume_Instantiate_4D.cpp
edit src/Field/HField/HFieldArea_DG.h
edit src/Discretization/Galerkin/IntegrandBoundaryTrace_Robin_sansLG_Galerkin.h
edit src/Discretization/Galerkin/IntegrandCell_Galerkin_HB.h
edit test/unit/Field/FieldDataMatrixD_CellLift_btest.cpp
edit src/Field/Field_CG/Field_CG_Topology.h
add src/Field/Field_CG/CMakeLists.txt
edit src/Discretization/Galerkin/IntegrandBoundaryTrace_None_Galerkin_manifold.h
edit src/Field/HField/HField_DG/HField_DG_Spacetime.cpp
edit src/Discretization/Galerkin/IntegrandBoundaryTrace_Dirichlet_Galerkin_HSM2D.h
edit src/Field/Local/XField_LocalPatchConstructor/XField_LocalPatchConstructor_Volume.cpp
edit src/Field/DistanceFunction/DistanceFunction.h
edit src/Discretization/Galerkin/IntegrandBoundaryTrace_Dirichlet_sansLG_Galerkin_manifold.h
edit src/Field/output_Tecplot/output_Tecplot_LiftArea.cpp
edit src/Discretization/Galerkin/SolutionData_Galerkin.h
edit src/Discretization/Galerkin/IntegrandBoundaryTrace_OutputWeightRsd_Galerkin.h
edit src/Field/ProjectSoln/ProjectGlobalField/ProjectGlobalField_impl.h
edit src/Field/HField/GenHFieldArea_CG.h
edit src/Field/Local/FieldLift_Local.h
edit src/Field/DistanceFunction/DistanceSolver.h
edit src/Discretization/DG/IntegrandBoundaryTrace_Flux_mitState_DGBR2_manifold.h
edit src/Field/ProjectSoln/InterpolateFunctionCell_Continuous.h
edit src/Discretization/DG/IntegrandCell_DGBR2_manifold.h
edit src/Field/HField/GenHFieldVolume_DG.h
edit src/Field/HField/HFieldArea_CG.h
edit src/Field/FieldData/FieldDataMatrixD_BoundaryTrace.h
edit src/Field/Local/XField_LocalPatchBase/XField_LocalPatchBase_Volume.cpp
add src/Field/Field_EG/CMakeLists.txt
edit src/Field/FieldGroupArea_Traits.h
edit src/Field/HField/GenHFieldArea_DG.h
edit src/Field/FieldSequence.h
edit src/Field/output_Tecplot/output_Tecplot_FieldVolume.cpp
edit src/Field/FieldLine_Instantiate_1D.cpp
edit src/Discretization/Galerkin/IntegrandInteriorTrace_Galerkin_manifold.h
edit src/Field/ElementConnectivity.h
edit src/Field/FieldGroupNode_Traits.h
edit src/Field/Function/WeightedFunctionIntegral.h
edit src/Field/ElementCounter.h
edit src/Discretization/Galerkin/IntegrandBoundaryTrace_Dirichlet_sansLG_Galerkin.h
edit src/Field/HField/GenHFieldVolume_CG.h
edit src/Field/ProjectSoln/ProjectSolnCell_Discontinuous.h
edit src/Field/output_Tecplot/output_Tecplot_Lift_impl.h
edit src/Field/output_Tecplot/output_Tecplot_SA_DGBR2.cpp
edit src/Field/output_Tecplot/output_Tecplot_Field_impl.h
edit src/Field/HField/HField_DG/HField_DG_Volume.cpp
edit src/Field/output_Tecplot/output_Tecplot_FieldLine_impl.h
edit src/Discretization/DG/IntegrandInteriorTrace_DGBR2_manifold.h
edit src/Field/HField/GenHField_DG/GenHField_DG_Line.cpp
edit src/Discretization/Galerkin/IntegrandBoundaryTrace_WakeMatch_Galerkin_IBL.h
edit src/Field/FieldVolume_Instantiate_3D.cpp
edit src/Discretization/DG/IntegrandCell_DGBR2.h
edit src/Discretization/Galerkin/IntegrandCell_Galerkin_manifold_IBL3D.h
edit src/Field/Partition/XField_Lagrange_impl.h
edit test/unit/Field/FieldLinesearch_btest.cpp
edit src/Discretization/Galerkin/IntegrandCell_Project.h
edit src/Field/Local/XField_LocalPatchBase.h
edit src/Field/ProjectSoln/ProjectGlobalField/ProjectGlobalField3D.cpp
edit src/Field/NormalField/NormalField_Volume.cpp
edit src/Discretization/Galerkin/ExtractCGLocalBoundaries.h
edit src/Field/HField/HField_DG/HField_DG_Area.cpp
edit src/Field/output_Tecplot/output_Tecplot_FieldLine_1D.cpp
edit src/Field/output_Tecplot/output_Tecplot_LiftVolume.cpp
edit src/Field/ProjectSoln/Project_DG_to_CG/Project_DG_to_CG_impl.h
edit src/Field/CountGhostNeighbors.h
edit src/Field/Field_NodalView_Line.cpp
edit src/Field/Local/XField_LocalPatchConstructor/XField_LocalPatchConstructor_Line.cpp
edit src/Field/ProjectSoln/ProjectSolnGradientCell_Discontinuous.h
edit src/Discretization/QuadratureOrder.h
edit src/Meshing/XField1D/XField1D.h
edit src/Field/Local/Field_Local.h
edit src/Field/HField/HField_DG/HField_DG_Line.cpp
edit src/Field/output_Tecplot/output_Tecplot_Metric_impl.h
edit src/Field/Local/FieldLiftBoundary_Local.h
edit src/Discretization/Galerkin/IntegrandInteriorTrace_Galerkin.h
edit src/Discretization/Galerkin/IntegrandBoundaryTrace_mitLG_Galerkin_manifold_IBL3D.h
edit src/Field/output_Tecplot/output_Tecplot_MetricVolume.cpp
delete src/Field/FieldSpacetime_CG_BoundaryFrame.h
edit src/Field/FieldLinesearch/FieldLinesearch_SpaceTime.h
edit src/Field/HField/HField_CG/HField_CG_Line.cpp
edit src/Field/output_Tecplot/output_Tecplot_Error.cpp
edit src/Discretization/Galerkin/IntegrandInteriorTrace_SIP_Galerkin.h
edit test/unit/Field/FieldDataMatrixD_Lift_BoundaryTrace_btest.cpp
edit src/Field/Local/XField_LocalPatch.h
edit test/unit/Field/FieldSequence_btest.cpp
edit src/Field/HField/GenHField_CG/GenHField_CG_Line.cpp
edit src/Discretization/DG/IntegrandBoundaryTrace_Flux_mitState_DGBR2.h
edit src/Field/DistanceFunction/DistanceSolver.cpp
edit src/Field/HField/HFieldLine_DG.h
edit src/Field/ProjectSoln/ProjectGlobalField/ProjectGlobalField4D.cpp
edit src/Discretization/Galerkin/IntegrandCell_Galerkin_StrongForm_Stabilized.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Local_Galerkin.h
edit src/Discretization/Galerkin/IntegrandBoundaryTrace_Output_Galerkin.h
edit src/Field/FieldLinesearch/FieldLinesearch_Area.h
edit src/Field/Local/XField_LocalPatch/XField_LocalPatch_Area.cpp
edit src/Discretization/Galerkin/IntegrandInteriorTrace_Galerkin_Stabilized.h
edit src/Field/Local/XField_LocalPatchConstructor.h
edit src/Discretization/Galerkin/IntegrandCell_Galerkin_PTC_manifold_IBL3D.h
edit test/unit/Field/CMakeLists.txt
edit src/Field/ProjectSoln/Project_DG_to_CG/Project_DG_to_CG_4D.cpp
edit src/Field/output_Tecplot/output_Tecplot_FieldArea.cpp
edit src/Field/DistanceFunction/DistanceFunctionGradient.cpp
edit src/Field/Local/XField_LocalPatchConstructor/XField_LocalPatchConstructor_impl.h
edit src/Field/FieldArea_Instantiate_2D.cpp
edit src/Field/ProjectSoln/ProjectSolnTrace_Discontinuous.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Local_Project.h
edit src/Discretization/DG/IntegrandInteriorTrace_DGBR2.h
edit src/Discretization/Galerkin/IntegrandCell_Galerkin_PTC.h
edit src/Discretization/Galerkin/IntegrandCell_Galerkin_HSMKL.h
edit test/unit/Field/ElementalMassMatrix_btest.cpp
edit src/Discretization/DG/IntegrandBoundaryTrace_LinearScalar_sansLG_DGBR2.h
edit src/Field/ProjectSoln/ProjectGlobalField/ProjectGlobalField2D.cpp
edit src/Field/Field_NodalView_Spacetime.cpp
edit src/Discretization/Galerkin/IntegrandCell_Galerkin_manifold.h
edit src/Field/HField/HFieldLine_CG.h
edit src/Field/FieldGroupVolume_Traits.h
edit src/Discretization/Galerkin/IntegrandInteriorTrace_JumpPenalty.h
edit src/Discretization/Galerkin/ResidualParamSensitvity_Galerkin_Stabilized.h
edit src/Discretization/Galerkin/IntegrandBoundaryTrace_Flux_mitState_Nitsche.h
edit src/Field/DistanceFunction/DistanceFunction.cpp
edit src/Field/ProjectSoln/Project_DG_to_CG.h
edit src/Field/Field.h
edit src/Field/HField/GenHField_DG/GenHField_DG_Spacetime.cpp
edit src/Discretization/Galerkin/IntegrandBoundaryTrace_Flux_mitState_Galerkin_manifold_IBL3D.h
edit src/Field/FieldData/FieldDataInvMassMatrix_Cell.cpp
edit src/Field/output_Tecplot/output_Tecplot_FieldVolume4.cpp
edit src/Discretization/DG/DiscretizationDGBR2.cpp
edit src/Field/Local/XField_LocalPatchBase/XField_LocalPatchBase_Spacetime.cpp
edit src/Field/ProjectSoln/Project_DG_to_CG/Project_DG_to_CG_3D.cpp
edit src/Field/HField/HFieldVolume_DG.h
edit src/Field/Function/FunctionIntegral.h
edit src/Field/HField/GenHFieldSpacetime_DG.h
add src/Field/Field_DG/CMakeLists.txt
edit src/Discretization/Galerkin/IntegrandCell_Galerkin_CutCellTransitionIBLUniField.h
edit src/Field/Local/XField_LocalPatchBase/XField_LocalPatchBase_impl.h
edit src/MPI/continuousElementMap.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Local_Galerkin_Stabilized.h
edit src/Discretization/Galerkin/IntegrandCell_Galerkin_Output.h
edit src/Field/HField/HFieldVolume_CG.h
edit src/Field/tools/findGroups.h
edit src/Field/FieldSubGroup.h
edit src/Discretization/DG/DiscretizationDGBR2.h
add test/unit/Field/Field_CG/CMakeLists.txt
edit src/Discretization/Galerkin/AlgebraicEquationSet_HubTrace_Galerkin.h
edit src/Discretization/Galerkin/IntegrandCell_Galerkin_BDF.h
edit src/Discretization/Galerkin/IntegrandCell_Galerkin_PTC_manifold.h
edit src/Field/output_Tecplot/output_Tecplot_MetricVolume4.cpp
edit src/Field/ProjectSoln/InterpolateFunctionTrace_Continuous.h
add src/Field/XField/CMakeLists.txt
edit src/Field/FieldData/FieldDataMatrixD_Lift_BoundaryTrace.h
edit src/Field/ProjectSoln/ProjectGlobalField/ProjectGlobalField1D.cpp
edit src/Field/Partition/XField_Lagrange.h
edit src/Discretization/DG/IntegrandCell_DGBR2_Output.h
edit test/unit/Field/Field2D_HDG_btest.cpp
edit src/Discretization/Galerkin/IntegrandCell_Galerkin_Output_Stabilized.h
edit src/Field/FieldLinesearch/FieldLinesearch_Line.h
edit src/Field/FieldBase.h
edit src/Field/HField/GenHField_CG/GenHField_CG_Volume.cpp
edit src/Discretization/Galerkin/IntegrandCell_ProjectDistance.h
edit src/Field/HField/GenHFieldLine_DG.h
edit src/Field/FieldLine_Instantiate_2D.cpp
edit src/Field/output_Tecplot/output_Tecplot_MetricArea.cpp
edit src/Field/ProjectSoln/ProjectSolnCell_Lagrange.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Local_Galerkin_Stabilized_LiftedBoundary.h
edit src/Field/HField/HField_CG/HField_CG_Area.cpp
edit src/Discretization/Galerkin/AlgebraicEquationSet_HubTrace_Galerkin_cutCellTransitionIBL.h
add test/unit/Field/Field_DG/CMakeLists.txt
edit src/Field/HField/GenHField_DG/GenHField_DG_Area.cpp
edit src/Field/ProjectSoln/ProjectSolnCell_CGtoDG.h
edit src/Field/output_Tecplot/output_Tecplot_FP.cpp
edit src/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_Stabilized.h
edit src/Field/FieldGroupLine_Traits.h

reconciling rest of code base with Field directory refactoring and Axes in ElementXField*,

by allmaras

edit src/Discretization/LIP_HACK/ResidualBoundaryFrameTrace_Galerkin.h
edit src/Adaptation/MOESS/CostModel_LogEuclidean/CostModel_LogEuclidean3D.cpp
edit src/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.h
edit src/UserInterfaces/BodyForceSolver.h
edit src/ErrorEstimate/Galerkin/OutputCorrection_Galerkin_Stabilized.h
edit src/Meshing/libMeshb/XField_libMeshb.h
edit src/pde/FullPotential/IntegrandBoundary3D_FP_Force.h
edit src/Discretization/HDG/AWIntegrandBoundaryFunctor_HDG.h
edit src/Adaptation/MOESS/MOESS_SANS_Optimizer_Base/MOESS_SANS_Optimizer_Base_3D.cpp
edit src/Discretization/HDG/IntegrandBoundaryTrace_Robin_sansLG_HDG.h
edit src/Adaptation/MOESS/NodalMetrics.h
edit src/Discretization/DG/DGAdvective_Instantiate/AlgebraicEquationSet_DGAdvective_Euler1D_Conservative.cpp
edit src/Discretization/VMSDBR2/IntegrandBoundaryTrace_Flux_mitState_VMSD_BR2.h
edit src/pde/FullPotential/FullPotential3D_Trefftz.h
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_AdvectionDiffusion1D_AUDUSUG.cpp
edit src/Meshing/refine/MesherInterface_refine.h
edit src/Discretization/HDG/Instantiate/AlgebraicEquationSet_HDG_AdvectionDiffusion1D_AUDUSUG.cpp
edit src/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_TwoPhase2D.cpp
edit src/Discretization/HDG/IntegrandCell_HDG.h
edit src/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_RANSSA2D_PrimitiveSutherland.cpp
edit src/Adaptation/MOESS/MOESS.h
edit src/Discretization/Potential_Drela/JacobianBoundaryFrame_CG_Potential_Drela.h
edit src/pde/FullPotential/LinearizedIncompressiblePotential3D_Trefftz.h
edit src/Discretization/Galerkin/SolutionData_Galerkin_Stabilized_LiftedBoundary.h
edit src/Adaptation/MOESS/MOESS_SANS_Optimizer_Base/MOESS_SANS_Optimizer_Base_4D.cpp
edit src/Discretization/DG/DGAdvective_Instantiate/AlgebraicEquationSet_DGAdvective_Euler1D_PrimitiveRhoPressure.cpp
edit src/Discretization/LIP_HACK/IntegrandFunctorCell_Galerkin_Kutta_LIP.h
edit src/Discretization/Potential_Drela/IntegrandBoundaryTrace_WakeCut_CG_LIP_Drela.h
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_NavierStokes2D_ConservativeConstVisc.cpp
edit src/Discretization/HDG/Instantiate/AlgebraicEquationSet_HDG_BuckleyLeverett1D.cpp
edit src/Discretization/Potential_Drela/JacobianCell_CG_Potential_Drela.h
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_BuckleyLeverett1D.cpp
edit src/Adaptation/MOESS/MOESS_SANS_Optimizer_Base/MOESS_SANS_Optimizer_Base_impl.h
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_AdvectionDiffusion2D_AUDPLSUG.cpp
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_ArtificialViscosity_RANSSA2D_PrimitiveSutherland.cpp
edit src/ErrorEstimate/Galerkin/ErrorEstimate_Galerkin.h
edit src/Discretization/DG/DGAdvective_Instantiate/AlgebraicEquationSet_DGAdvective_Euler3D_PrimitiveSurrogate.cpp
edit src/Meshing/ugrid/WriteMesh_ugrid.h
edit src/Discretization/VMSDBR2/IntegrandBoundaryTrace_Dirichlet_mitLG_VMSD_BR2.h
edit src/Discretization/VMSDBR2/SetAdjointLO_VMSD_BR2.h
edit src/Adaptation/MOESS/NLOPT/MOESS_SANS_Optimizer_NLOPT/MOESS_SANS_Optimizer_NLOPT_4D.cpp
edit src/ErrorEstimate/VMSD/ErrorEstimateCell_VMSD_BR2.h
edit src/Adaptation/MOESS/NodalMetrics/NodalMetrics2D.cpp
edit src/Discretization/HDG/AWResidualCell_HDG.h
edit src/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_impl.h
edit src/Discretization/HDG/Instantiate/AlgebraicEquationSet_HDG_AdvectionDiffusion1D_ALaxDUSU.cpp
edit src/Adaptation/MeshAdapter/MeshAdapter3D.cpp
edit src/Adaptation/callMesher.h
edit src/SolutionTrek/Continuation/Homotopy/AlgebraicEquationSet_HTC.h
edit src/Discretization/HDG/IntegrandCell_HDG_Output.h
edit src/Discretization/HDG/AlgebraicEquationSet_HDG.h
edit src/Adaptation/MOESS/CostModel_LogEuclidean/CostModel_LogEuclidean1D.cpp
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_AdvectionDiffusion2D_AUDUSUG.cpp
edit src/Discretization/VMSD/JacobianFunctionalCell_VMSD.h
edit src/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_AdvectionDiffusion3D_AUDUSUG.cpp
edit src/ErrorEstimate/DG/ErrorEstimate_DGBR2.h
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_TwoPhase2D_LogpnSw.cpp
edit src/Discretization/LIP_HACK/IntegrandBoundaryTrace_Galerkin_Wall_IPTF.h
edit src/Discretization/VMSD/JacobianCell_VMSD_SC.h
edit src/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_Sensor2D_AUSJump_Euler1D_Conservative.cpp
edit src/Adaptation/MOESS/NodalMetrics/NodalMetrics1D.cpp
edit src/Discretization/VMSD/IntegrandCell_VMSD.h
edit src/Meshing/gmsh/WriteMesh_gmsh.h
edit src/Meshing/refine/MesherInterface_refine.cpp
edit src/Discretization/LIP_HACK/IntegrandInteriorTrace_Galerkin_WakeCut_LIP_SRA.h
edit src/Discretization/VMSDBR2/IntegrandBoundaryTrace_LinearScalar_sansLG_VMSD_BR2.h
edit src/Discretization/HDG/SetFieldCell_HDG_AuxiliaryAdjoint.h
edit src/Adaptation/TargetMetric/TargetMetric_impl.h
edit src/Discretization/LIP_HACK/JacobianBoundaryFrameTrace_Galerkin.h
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_NavierStokes3D_PrimitiveConstVisc.cpp
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_RANSSA2D_PrimitiveConstVisc.cpp
edit src/pde/FullPotential/IntegrandBoundary3D_LIP_Force.h
edit src/Adaptation/MOESS/ErrorModel/ErrorModel4D.cpp
edit src/ErrorEstimate/VMSD/ErrorEstimateBase_VMSD.cpp
edit src/Discretization/VMSD/IntegrandCell_VMSD_Output.h
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_ArtificialViscosity_Euler1D_Surrogate.cpp
edit src/SolutionTrek/Continuation/DissipationBased/AlgebraicEquationSet_DBC.h
edit src/Discretization/DG/AlgebraicEquationSet_DGAdvective_impl.h
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Sensor2D_AUSJump_Euler2D_Conservative.cpp
edit src/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_NavierStokes3D_PrimitiveSutherland.cpp
edit src/pde/FullPotential/LinearizedIncompressiblePotential3D_Circulation.h
edit src/Discretization/HDG/AlgebraicEquationSet_Local_HDG.h
edit src/Discretization/HDG/JacobianFunctionalBoundaryTrace_Dispatch_HDG.h
edit src/Discretization/HDG/Instantiate/AlgebraicEquationSet_HDG_AdvectionDiffusion3D_AUDUSUG.cpp
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_RANSSA3D_SurrogateSutherland.cpp
edit src/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_TwoPhase2D_Surrogate_pnSw.cpp
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_AdvectionDiffusion3D_manifold_AUDUSN.cpp
edit src/Discretization/HDG/IntegrandBoundaryTrace_Dirichlet_sansLG_HDG.h
edit src/Discretization/Potential_Adjoint/ResidualBoundaryTrace_WakeCut_CG_Potential_Adjoint.h
edit src/Discretization/DG/DGAdvective_Instantiate/AlgebraicEquationSet_DGAdvective_AdvectionDiffusion3D_AUDNSU.cpp
edit src/pde/IBL/GetSolnDofCell_IBL2D.h
edit src/ErrorEstimate/Galerkin/ErrorEstimate_StrongForm_Galerkin_Stabilized.h
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_ArtificialViscosity_RANSSA2D_PrimitiveConstVisc.cpp
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_TwoPhase2D_Surrogate_pnSw.cpp
edit src/Discretization/HDG/AlgebraicEquationSet_HDG_impl.h
edit test/unit/Adaptation/MOESS/MOESS_btest.cpp
edit src/Discretization/LIP_HACK/ResidualBoundaryFrame_Galerkin.h
edit src/Adaptation/MOESS/NLOPT/MOESS_SANS_Optimizer_NLOPT/MOESS_SANS_Optimizer_NLOPT_3D.cpp
edit src/Discretization/VMSD/IntegrandBoundaryTrace_OutputWeightRsd_VMSD.h
edit src/Discretization/DG/AlgebraicEquationSet_DGBR2_impl.h
edit src/ErrorEstimate/VMSD/ErrorEstimateCell_VMSD.h
edit test/unit/Adaptation/MOESS/AnisotropicStepCalculation_btest.cpp
edit src/Adaptation/MOESS/XFieldND_EquilateralRef/XFieldND_EquilateralRef1D.cpp
edit src/Discretization/DG/SolutionData_DGBR2.h
edit src/pde/IBL/SetQauxvDofCell_IBL2D.h
edit src/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_RANSSA2D_PrimitiveConstVisc.cpp
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_AdvectionDiffusion3D_AUDUSUG.cpp
edit src/Discretization/HDG/Instantiate/AlgebraicEquationSet_HDG_Euler1D_PrimitiveRhoPressure.cpp
edit src/Discretization/HDG/Instantiate/AlgebraicEquationSet_HDG_RANSSA2D_Primitive_ConstantViscosity.cpp
edit src/Discretization/HDG/IntegrandInteriorTrace_HDG.h
edit src/Adaptation/MOESS/ProblemStatement_HDG_ErrorEstimate.h
edit src/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_CutcellTransitionIBL.h
edit src/SolutionTrek/TimeMarching/AlgebraicEquationSet_TimeMarch.h
edit src/ErrorEstimate/VMSD/ErrorEstimateBase_VMSD_BR2.h
edit src/Discretization/LIP_HACK/IntegrandInteriorTrace_Galerkin_WakeCut_IPTF.h
edit src/Discretization/HDG/JacobianFunctionalCell_HDG.h
edit src/Discretization/VMSDBR2/IntegrandBoundaryTrace_None_VMSD_BR2.h
edit src/Discretization/HDG/IntegrandBoundaryTrace_LinearScalar_mitLG_HDGAdvective.h
edit src/Adaptation/MOESS/MMA/MOESS_SANS_Optimizer_MMA/MOESS_SANS_Optimizer_MMA_1D.cpp
edit src/Discretization/DG/JacobianFunctionalCell_DGBR2.h
edit src/Discretization/Potential_Drela/ResidualBoundaryFrame_CG_Potential_Drela.h
edit src/Adaptation/MOESS/MOESS_SANS_Optimizer_Base/MOESS_SANS_Optimizer_Base_2D.cpp
edit src/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_ArtificialViscosity_TwoPhase1D.cpp
edit src/ErrorEstimate/VMSD/ErrorEstimate_VMSD_BR2.h
edit src/Adaptation/MOESS/ErrorModel/ErrorModel1D.cpp
edit src/Discretization/DG/DGAdvective_Instantiate/AlgebraicEquationSet_DGAdvective_AdvectionDiffusion1D_AUDNSN.cpp
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Euler1D_AV1D_Conservative.cpp
edit src/Discretization/LIP_HACK/IntegrandFunctor_Galerkin_WakeCut_sansLG.h
edit src/Discretization/DG/DGAdvective_Instantiate/AlgebraicEquationSet_DGAdvective_Burgers1D_Conservative_DNSN.cpp
edit src/Discretization/HDG/AWResidualInteriorTrace_HDG.h
edit src/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_TwoPhase1D.cpp
edit src/Discretization/VMSDBR2/IntegrandBoundaryTrace_Dirichlet_sansLG_VMSD_BR2.h
edit src/Discretization/VMSD/AlgebraicEquationSet_Local_VMSD.h
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Euler1D_AV1D_Primitive.cpp
edit src/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_Burgers2D_Conservative_DUSN.cpp
edit src/ErrorEstimate/Galerkin/ErrorEstimate_StrongForm_Galerkin.h
edit src/Adaptation/MOESS/NLOPT/MOESS_SANS_Optimizer_NLOPT/MOESS_SANS_Optimizer_NLOPT_1D.cpp
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Sensor2D_AUSJump_AD.cpp
edit src/Adaptation/MeshAdapter/MeshAdapter1D.cpp
edit src/Discretization/VMSDBR2/JacobianCell_VMSD_BR2.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Project.h
edit src/SolutionTrek/Continuation/PseudoTime/AlgebraicEquationSet_PTC.h
edit src/Discretization/HDG/IntegrandBoundaryTrace_LinearScalar_sansLG_HDG.h
edit src/Meshing/libMeshb/WriteSolution_libMeshb.cpp
edit src/Optimization/Problems/Truss/JacobianConstraint_Truss_Boundary.h
edit src/Discretization/LIP_HACK/ResidualBoundaryFrame_Galerkin_Darmofal.h
edit src/SolutionTrek/TimeMarching/BackwardsDifference/BDF.h
edit src/PanelMethod/IntegrandBoundaryTrace_ProjectToQauxi.h
edit src/Discretization/HDG/Instantiate/AlgebraicEquationSet_HDG_Burgers1D_Conservative_DUSU.cpp
edit src/Discretization/HDG/AWResidualBoundaryTrace_HDG.h
edit src/Discretization/LIP_HACK/IntegrandBoundaryFrameTrace_Galerkin.h
edit src/Discretization/VMSDBR2/IntegrandTrace_VMSD_BR2.h
edit src/Meshing/EPIC/XField_PX.cpp
edit src/ErrorEstimate/Galerkin/ErrorEstimateNodalBase_Galerkin.h
edit src/Discretization/DG/DGAdvective_Instantiate/AlgebraicEquationSet_DGAdvective_AdvectionDiffusion2D_AUDNSN.cpp
edit src/Discretization/DG/DGAdvective_Instantiate/AlgebraicEquationSet_DGAdvective_Euler2D_PrimitiveRhoPressure.cpp
edit src/Meshing/libMeshb/XFieldArea_libMeshb.cpp
edit src/Discretization/DG/JacobianDetInvResidualNorm.h
edit src/Meshing/ugrid/XFieldVolume_ugrid.cpp
edit src/Discretization/DG/DGAdvective_Instantiate/AlgebraicEquationSet_DGAdvective_Euler2D_Entropy.cpp
edit src/ErrorEstimate/Galerkin/ErrorEstimateNodal_Galerkin_LiftedBoundary.h
edit src/ErrorEstimate/ErrorEstimate_L2.h
edit src/Discretization/Potential_Adjoint/IntegrandBoundaryFrame_CG_LIP_Adjoint.h
edit src/Discretization/Block/AlgebraicEquationSet_Block2x2.h
edit src/Adaptation/MOESS/ErrorModel/ErrorModel_impl.h
edit src/Meshing/EPIC/SolutionField_PX.cpp
edit src/PanelMethod/XfoilPanelEquationSet.h
edit src/Adaptation/TargetMetric/TargetMetric1D.cpp
edit src/ErrorEstimate/Galerkin/ErrorEstimateBase_Galerkin.h
edit src/Adaptation/MOESS/XFieldND_EquilateralRef/XFieldND_EquilateralRef2D.cpp
edit src/Discretization/Potential_Drela/JacobianBoundaryTrace_WakeCut_CG_Potential_Drela.h
edit src/Discretization/HDG/IntegrandInteriorTrace_HDGAdvective.h
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_NavierStokesBrenner2D_PrimitiveConstVisc.cpp
edit src/Adaptation/MOESS/MOESS/MOESS4D.cpp
edit src/ErrorEstimate/VMSD/ErrorEstimateBase_VMSD_BR2.cpp
edit src/Adaptation/MOESS/ErrorModel/ErrorModel3D.cpp
edit src/Meshing/ugrid/XField_ugrid.h
edit src/Discretization/HDG/IntegrandBoundaryTrace_None_HDG.h
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_BuckleyLeverett1D_SurrogateSw.cpp
edit src/Discretization/VMSDBR2/IntegrandCell_VMSD_BR2.h
edit src/Adaptation/MOESS/CostModel_LogEuclidean/CostModel_LogEuclidean4D.cpp
edit src/Adaptation/MOESS/MOESS/MOESS3D.cpp
edit src/Discretization/HDG/JacobianCell_HDG.h
edit src/Discretization/LIP_HACK/JacobianBoundaryFrame_Galerkin_Darmofal.h
edit src/Adaptation/MOESS/NodalMetrics/NodalMetrics3D.cpp
edit src/Optimization/Problems/Truss/LengthObjective_Truss.h
edit src/Adaptation/MOESS/XFieldND_EquilateralRef.h
edit src/Discretization/Galerkin/ResidualBoundaryTrace_mitLG_Galerkin.h
edit src/Discretization/VMSD/IntegrandBoundaryTrace_Dirichlet_sansLG_VMSD.h
edit src/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_NavierStokes3D_SurrogateSutherland.cpp
edit src/Discretization/CG/ResidualParamSensitivity_CG.h
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Euler2D_AV2D_Primitive.cpp
edit src/pde/IBL/SetIBLoutputCellGroup.h
edit src/Meshing/EPIC/MesherInterface_Epic.cpp
edit src/Discretization/DG/FunctionalCell_DGBR2.h
edit src/Adaptation/MOESS/NLOPT/ImpliedMetric_Optimizer_NLOPT/ImpliedMetric_Optimizer_NLOPT_3D.cpp
edit src/Discretization/DG/DGAdvective_Instantiate/AlgebraicEquationSet_DGAdvective_Euler2D_PrimitiveSurrogate.cpp
edit src/Discretization/HDG/Instantiate/AlgebraicEquationSet_HDG_Stokes2D.cpp
edit src/Discretization/Potential_Drela/IntegrandBoundaryTrace_WakeCut_CG_FP_Drela.h
edit src/Discretization/VMSDBR2/SolutionData_VMSD_BR2.h
edit src/Discretization/DG/AlgebraicEquationSet_Local_DG_impl.h
edit src/Meshing/libMeshb/WriteMesh_libMeshb.cpp
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_ArtificialViscosity_Euler1D_Conservative.cpp
edit src/Discretization/HDG/IntegrandBoundaryTrace_OutputWeightRsd_HDG.h
edit src/Discretization/HDG/AlgebraicEquationSet_Hubtrace_HDGAdvective_CutcellTransitionIBL.h
edit src/Discretization/Potential_Adjoint/IntegrandBoundaryTrace_WakeCut_CG_FP_Virtual.h
edit src/Discretization/DG/DGAdvective_Instantiate/AlgebraicEquationSet_DGAdvective_AdvectionDiffusion1D_AUDNSUG.cpp
edit src/ErrorEstimate/ErrorEstimate_Common.h
edit src/Adaptation/TargetMetric/TargetMetric4D.cpp
edit src/SolutionTrek/Continuation/PseudoTime/AlgebraicEquationSet_PTC_VMSD.h
edit src/pde/IBL/ElementProjectionIBLoutput_L2.h
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_ArtificialViscosity_BuckleyLeverett1D.cpp
edit src/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_Stabilized_LiftedBoundary.h
edit src/OutputFunctional/FunctionalCellwise.h
edit src/Discretization/VMSDBR2/SetLiftingOperator_VMSD_BR2.h
edit src/Meshing/Pointwise/WriteMetric_PointwisePCD.cpp
edit test/unit/Adaptation/MOESS/CostModel_LogEuclidian_btest.cpp
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_NavierStokes2D_PrimitiveSutherland.cpp
edit src/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_NavierStokes2D_PrimitiveSutherland.cpp
edit src/Discretization/Galerkin/IntegrandBoundaryTrace_Flux_mitState_Galerkin_manifold_IBL3D.h
edit src/Discretization/DG/AlgebraicEquationSet_TransitionIBL.h
edit src/Discretization/DG/FunctionalCellwise_DGBR2.h
edit src/Discretization/LIP_HACK/JacobianCell_Galerkin_Kutta.h
edit src/Adaptation/MOESS/ErrorModel.h
edit src/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_RANSSA3D_PrimitiveSutherland.cpp
edit src/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.h
edit src/Meshing/Pointwise/MesherInterface_Pointwise.h
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_AdvectionDiffusion1D_ALaxDUSU.cpp
edit src/Meshing/ugrid/WriteMesh_ugrid.cpp
edit src/Discretization/HDG/AWResidualBCTrace_HDG.h
edit src/Adaptation/MeshAdapter/MeshAdapter2D.cpp
edit src/pde/IBL/SetTransitionFrontIBL2D_InteriorTraceGroup.h
edit src/Discretization/HDG/IntegrandBoundaryTrace_None_HDGAdvective.h
edit src/Discretization/DG/DGAdvective_Instantiate/AlgebraicEquationSet_DGAdvective_Lorenz.cpp
edit src/Discretization/DG/DGAdvective_Instantiate/AlgebraicEquationSet_DGAdvective_ShallowWater1D.cpp
edit src/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_ArtificialViscosity_TwoPhase2D_LogpnSw.cpp
edit src/Discretization/HDG/IntegrandBoundaryTrace_Dirichlet_mitLG_HDG.h
edit src/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_RANSSA3D_PrimitiveConstVisc.cpp
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Sensor1D_AUSJump_AD.cpp
edit src/Discretization/HDG/ResidualCell_HDG_HB.h
edit src/Discretization/DG/DGAdvective_Instantiate/AlgebraicEquationSet_DGAdvective_Euler3D_PrimitiveRhoPressure.cpp
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Sensor1D_AUSJump_BuckleyLeverett1D.cpp
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Sensor2D_AUSJump_Euler2D_Primitive.cpp
edit src/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_NavierStokes3D_PrimitiveConstVisc.cpp
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_RANSSA2D_PrimitiveSutherland.cpp
edit src/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_Euler1D_AV1D_Conservative.cpp
edit src/Discretization/DG/SolutionData_DGAdvective.h
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_AdvectionDiffusion2D_AUDUSN.cpp
edit src/Discretization/VMSDBR2/JacobianCell_VMSD_BR2_withPTC.h
edit src/Discretization/VMSD/IntegrandBoundaryTrace_Robin_sansLG_VMSD.h
edit src/ErrorEstimate/HDG/ErrorEstimateCell_HDG.h
edit src/Discretization/VMSD/IntegrandCell_VMSD_NL.h
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_AdvectionDiffusion1D_AUDUSN.cpp
edit src/Discretization/DG/AlgebraicEquationSet_Local_DG.h
edit src/Discretization/DG/DGAdvective_Instantiate/AlgebraicEquationSet_DGAdvective_Euler2D_Conservative.cpp
edit src/Adaptation/MOESS/NLOPT/MOESS_PX_Optimizer_NLOPT/MOESS_PX_Optimizer_NLOPT_1D.cpp
edit src/Meshing/refine/XField_refine.cpp
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_TwoPhase2D.cpp
edit src/Discretization/HDG/IntegrandBoundaryTrace_LinearScalar_mitLG_HDG.h
edit src/Adaptation/MeshAdapter.h
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_RANSSA_Source2D_PrimitiveConstVisc.cpp
edit src/Discretization/Galerkin/SolutionData_Galerkin_Stabilized.h
edit src/pde/FullPotential/FullPotential3D_Circulation.h
edit src/Discretization/LIP_HACK/IntegrandBoundaryFrame_Galerkin.h
edit src/Discretization/Potential_Adjoint/ResidualBoundaryFrame_CG_Potential_Adjoint.h
edit src/Optimization/Problems/Truss/LengthObjective_Truss_Boundary.h
edit src/SolutionTrek/Continuation/PseudoTime/SetLocalTimeStep.h
edit src/Discretization/Potential_Drela/ResidualParamSensitivity_CG_Potential_Drela.h
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Burgers2D_Conservative_DUSN.cpp
edit src/Meshing/Embedding/MesherInterface_Embedding.cpp
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Lorenz.cpp
edit src/SolutionTrek/TimeMarching/AlgebraicEquationSet_TimeStep.h
edit src/Discretization/VMSD/AlgebraicEquationSet_Local_VMSD_Linear.h
edit src/Adaptation/MOESS/MMA/MOESS_SANS_Optimizer_MMA/MOESS_SANS_Optimizer_MMA_impl.h
edit src/Adaptation/MOESS/NLOPT/MOESS_PX_Optimizer_NLOPT/MOESS_PX_Optimizer_NLOPT_4D.cpp
edit src/Discretization/DG/DGAdvective_Instantiate/AlgebraicEquationSet_DGAdvective_Euler1D_Entropy.cpp
edit src/Discretization/DG/DGAdvective_Instantiate/AlgebraicEquationSet_DGAdvective_AdvectionDiffusion2D_manifold_Circle_AUDNSN.cpp
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Sensor2D_AUSJump_Euler1D_Conservative.cpp
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_ArtificialViscosity_TwoPhase1D.cpp
edit src/UserInterfaces/output_Tecplot_SA_CG.cpp
edit src/Discretization/Galerkin/ResidualBoundaryTrace_Dirichlet_mitLG_Galerkin.h
edit src/Discretization/HDG/IntegrandBoundaryTrace_HubTrace_HDGAdvective.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Galerkin.h
edit src/Discretization/LIP_HACK/ResidualBoundaryTrace_Galerkin_WakeCut_LIP.h
edit src/Discretization/HDG/ResidualBoundaryTrace_HDGAdvective.h
edit src/Discretization/DG/DGAdvective_Instantiate/AlgebraicEquationSet_DGAdvective_ShallowWater2D_manifold_Circle.cpp
edit src/Discretization/VMSD/JacobianCell_VMSD_SC2.h
edit src/Adaptation/MOESS/MOESS/MOESS1D.cpp
edit src/Meshing/ugrid/XFieldArea_ugrid.cpp
edit src/PanelMethod/IntegrandInteriorTrace_ProjectToQauxi3D.h
edit src/Discretization/HDG/Instantiate/AlgebraicEquationSet_HDG_AdvectionDiffusion2D_AUDUSUG.cpp
edit src/UserInterfaces/LIPSolver.cpp
edit src/Adaptation/MOESS/MMA/MOESS_SANS_Optimizer_MMA/MOESS_SANS_Optimizer_MMA_2D.cpp
edit src/Discretization/FV_TPFA/IntegrandCell_FV_TPFA.h
edit src/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_Sensor2D_AUSJump_AD.cpp
edit src/Discretization/HDG/IntegrandFunctor_HDG_HB.h
edit src/Discretization/HDG/Instantiate/AlgebraicEquationSet_HDGAdvective_Advection1D_AUSU.cpp
edit src/Discretization/LIP_HACK/JacobianBoundaryFrame_Galerkin.h
edit src/pde/IBL/ElementProjectionOutputIBL3D.h
edit src/Discretization/FV_TPFA/IntegrandCell_FV_TPFA_Output.h
edit src/Adaptation/MOESS/MOESS_SANS_Optimizer_Base/MOESS_SANS_Optimizer_Base_1D.cpp
edit src/Adaptation/MOESS/NodalMetrics/NodalMetrics4D.cpp
edit src/ErrorEstimate/DG/ErrorEstimate_DGAdvective.h
edit src/Discretization/Potential_Drela/IntegrandBoundaryFrame_CG_LIP_Drela.h
edit src/Discretization/Potential_Adjoint/AlgebraicEquationSet_CG_Potential_Adjoint.h
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_ArtificialViscosity_TwoPhase2D_LogpnSw.cpp
edit src/SolutionTrek/TimeMarching/RungeKutta/RungeKutta.h
edit src/Discretization/VMSD/JacobianCell_VMSD.h
edit src/Meshing/gmsh/XField_gmsh.h
edit src/Meshing/refine/MultiScale_metric.cpp
edit src/Meshing/Embedding/MesherInterface_Embedding.h
edit src/Meshing/EGTess/WakedFarFieldBox.cpp
edit src/Discretization/VMSD/IntegrandBoundaryTrace_Dirichlet_mitLG_VMSD.h
edit src/Discretization/DG/DGAdvective_Instantiate/AlgebraicEquationSet_DGAdvective_AdvectionDiffusion2D_Annulus_DNSN.cpp
edit src/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_Sensor1D_AUSJump_AD.cpp
edit src/ErrorEstimate/Galerkin/ErrorEstimateNodalBase_Galerkin.cpp
edit src/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_Lorenz.cpp
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_TwoPhaseLinearized1D.cpp
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Burgers1D_Conservative_DUSU.cpp
edit src/Discretization/VMSDBR2/IntegrandBoundaryTrace_LinearScalar_mitLG_VMSD_BR2.h
edit src/Discretization/HDG/IntegrandBoundaryTrace_LinearScalar_sansLG_HDGAdvective.h
edit src/Discretization/VMSDBR2/IntegrandBoundaryTrace_Output_VMSD_BR2.h
edit src/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_RANSSA3D_SurrogateSutherland.cpp
edit src/Discretization/Potential_Adjoint/JacobianBoundaryFrame_CG_Potential_Virtual.h
edit src/Discretization/Potential_Drela/ResidualCell_CG_Potential_Drela.h
edit src/pde/IBL/SetIBLoutputCellGroup3D.h
edit src/Adaptation/TargetMetric/TargetMetric3D.cpp
edit src/SolutionTrek/Continuation/Homotopy/Homotopy.h
edit src/Discretization/Potential_Adjoint/AlgebraicEquationSet_CG_Potential_Virtual.h
edit src/Discretization/VMSD/IntegrandBoundaryTrace_LinearScalar_mitLG_VMSD.h
edit src/Discretization/VMSDBR2/IntegrandBoundaryTrace_OutputWeightRsd_VMSD_BR2.h
edit src/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_Burgers_AV1D_DUSUG.cpp
edit src/pde/IBL/SetSolnDofCell_IBL2D.h
edit src/Discretization/Galerkin/ExtractCGLocalBoundaries/ExtractCGLocalBoundaries3D.cpp
edit src/Adaptation/MOESS/CostModel_LogEuclidean/CostModel_LogEuclidean2D.cpp
edit src/Discretization/HDG/Instantiate/AlgebraicEquationSet_HDG_NavierStokes2D_Primitive_ConstantViscosity.cpp
edit src/Meshing/Pointwise/MesherInterface_Pointwise.cpp
edit src/Discretization/FV_TPFA/IntegrandInteriorTrace_FV_TPFA.h
edit src/Discretization/HDG/JacobianCell_HDG_PTC.h
edit src/Discretization/HDG/IntegrandBoundaryTrace_Flux_mitState_HDG.h
edit src/Adaptation/MOESS/MMA/MOESS_SANS_Optimizer_MMA/MOESS_SANS_Optimizer_MMA_3D.cpp
edit src/PanelMethod/XfoilPanel.h
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_RANSSA3D_PrimitiveSutherland.cpp
edit src/Adaptation/MOESS/MOESS/MOESS2D.cpp
edit src/Meshing/gmsh/XField_gmsh.cpp
edit src/Optimization/Problems/Truss/LengthFrame_Truss.h
edit src/PanelMethod/FunctionEvalQauxv_IBL_PiecewiseConstSourcePanel_FlatPlate3D.h
edit test/unit/Adaptation/MOESS/ErrorModel_btest.cpp
edit src/Discretization/LIP_HACK/IntegrandBoundaryTrace_Galerkin_Farfield_IPTF.h
edit src/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_BuckleyLeverett1D.cpp
edit src/Discretization/VMSD/FunctionalCell_VMSD.h
edit src/Adaptation/TargetMetric/TargetMetric2D.cpp
edit src/Optimization/Problems/Truss/ConstraintFrame_Truss.h
edit test/unit/Adaptation/MOESS/ErrorModel_Local_btest.cpp
edit src/Discretization/LIP_HACK/ResidualBoundaryFrame_Galerkin_Circ.h
edit src/Discretization/Potential_Drela/AlgebraicEquationSet_CG_Potential_Drela.h
edit src/ErrorEstimate/HDG/ErrorEstimate_HDG.h
edit src/Meshing/refine/XField_refine.h
edit src/ErrorEstimate/VMSD/ErrorEstimateBase_VMSD.h
edit src/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_BuckleyLeverett_AV1D_Sensor_AUSJump.cpp
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_NavierStokes2D_PrimitiveConstVisc.cpp
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_AdvectionDiffusion2D_AUDHJSUG.cpp
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Burgers1D_Conservative_DUSN.cpp
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Euler2D_AV2D_Conservative.cpp
edit src/Discretization/VMSDBR2/JacobianCell_VMSD_BR2_Uncondensed.h
edit src/Meshing/gmsh/WriteMesh_gmsh.cpp
edit src/Adaptation/MOESS/SolverInterface_L2Project.h
edit src/ErrorEstimate/VMSD/ErrorEstimate_VMSD.h
edit src/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_ArtificialViscosity_TwoPhase2D.cpp
edit src/Discretization/LIP_HACK/ResidualCell_Galerkin_Kutta.h
edit src/Discretization/VMSD/IntegrandTrace_VMSD.h
edit src/Meshing/EGTess/EGTriangle.h
edit src/Meshing/TetGen/EGTetGen.h
edit src/Discretization/Potential_Adjoint/IntegrandBoundaryFrame_CG_FP_Virtual.h
edit src/ErrorEstimate/Galerkin/ErrorEstimateInteriorTrace_SIP_Galerkin.h
edit src/Optimization/Problems/Truss/JacobianConstraint_Truss.h
edit src/Discretization/DG/DGAdvective_Instantiate/AlgebraicEquationSet_DGAdvective_AdvectionDiffusion2D_manifold_AUDNSN.cpp
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_NavierStokes3D_PrimitiveSutherland.cpp
edit src/Discretization/Potential_Drela/IntegrandBoundaryFrame_CG_FP_Drela.h
edit src/Adaptation/MOESS/XFieldND_EquilateralRef/XFieldND_EquilateralRef3D.cpp
edit src/Discretization/Galerkin/ExtractCGLocalBoundaries/ExtractCGLocalBoundaries1D.cpp
edit src/Discretization/LIP_HACK/IntegrandBoundaryTrace_Galerkin_WakeCut_LIP_SRA.h
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_TwoPhase1D.cpp
edit test/unit/Adaptation/MOESS/MMA/MOESS_SANS_Optimizer_MMA_btest.cpp
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_NavierStokes3D_SurrogateSutherland.cpp
edit src/Discretization/Potential_Adjoint/ResidualBoundaryFrame_CG_Potential_Virtual.h
edit src/Discretization/Galerkin/ExtractCGLocalBoundaries/ExtractCGLocalBoundaries2D.cpp
edit src/Meshing/libMeshb/WriteMesh_libMeshb.h
edit src/Adaptation/MOESS/NLOPT/MOESS_PX_Optimizer_NLOPT/MOESS_PX_Optimizer_NLOPT_2D.cpp
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_BuckleyLeverett_AV1D.cpp
edit src/Discretization/LIP_HACK/JacobianBoundaryFrame_Galerkin_Circ.h
edit src/OutputFunctional/IntegrandBoundaryTrace_LagrangeMultiplier.h
edit src/Discretization/HDG/IntegrandFunctor_HDG_PTC.h
edit src/ErrorEstimate/Galerkin/ErrorEstimateNodal_Galerkin_Stabilized.h
edit src/Discretization/VMSD/IntegrandTrace_VMSD_NL.h
edit src/Discretization/HDG/FunctionalCellwise_HDG.h
edit src/Discretization/HDG/Instantiate/AlgebraicEquationSet_HDG_Euler1D_Conservative.cpp
edit src/Adaptation/MOESS/SolverInterface.h
edit src/Discretization/VMSDBR2/AlgebraicEquationSet_Local_VMSD_BR2.h
edit src/Adaptation/MOESS/MMA/MOESS_SANS_Optimizer_MMA/MOESS_SANS_Optimizer_MMA_4D.cpp
edit src/Discretization/LIP_HACK/JacobianBoundaryTrace_Galerkin_WakeCut_LIP.h
edit src/Discretization/HDG/FunctionalCell_HDG.h
edit src/Discretization/IntegrateCellTraceGroups_FieldTrace.h
edit src/Discretization/LIP_HACK/IntegrandFunctor_Galerkin_WakeCut_LIP.h
edit src/Discretization/LIP_HACK/IntegrandCell_Galerkin_Darmofal.h
edit src/Discretization/VMSD/IntegrandBoundaryTrace_None_VMSD.h
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_ArtificialViscosity_Euler2D_Conservative.cpp
edit src/pde/IBL/SetVelDofCell_IBL2D.h
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_ArtificialViscosity_Euler1D_Primitive.cpp
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Burgers_AV1D_DUSUG.cpp
edit src/Meshing/avro/MesherInterface_avro.h
edit src/pde/IBL/SetIBLtransitionFrontCellGroup.h
edit src/Discretization/Potential_Adjoint/JacobianBoundaryTrace_WakeCut_CG_Potential_Adjoint.h
edit src/pde/FullPotential/IntegrandFunctorBoundary3D_LIP_Vn2.h
edit src/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_AdvectionDiffusion2D_AUDUSUG.cpp
edit src/ErrorEstimate/Galerkin/ErrorEstimateNodal_Galerkin.h
edit src/Adaptation/MOESS/NLOPT/ImpliedMetric_Optimizer_NLOPT/ImpliedMetric_Optimizer_NLOPT_4D.cpp
edit src/Meshing/EGTess/EGTessFace.h
edit src/PanelMethod/FunctionEvalQauxv_IBL.h
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_ArtificialViscosity_TwoPhase2D.cpp
edit src/SolutionTrek/Continuation/PseudoTime/SetLocalTimeStep_VMSD.h
edit src/Discretization/VMSD/AlgebraicEquationSet_VMSD_Linear.h
edit src/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_Burgers1D_Conservative_DUSN.cpp
edit src/Discretization/DG/DGAdvective_Instantiate/AlgebraicEquationSet_DGAdvective_BuckleyLeverett1D.cpp
edit src/Meshing/refine/refine_ptr.h
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_ArtificialViscosity_RANSSA3D_PrimitiveSutherland.cpp
edit src/Discretization/HDG/Instantiate/AlgebraicEquationSet_HDG_Euler2D_PrimitiveRhoPressure.cpp
edit src/Adaptation/MetricConformity.h
edit src/Discretization/LIP_HACK/IntegrandBoundaryFrame_Galerkin_Circ.h
edit src/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_AdvectionDiffusion1D_AUDUSUG.cpp
edit src/tools/SANSnumerics.h
edit src/Discretization/VMSD/IntegrandCell_VMSD_PTC.h
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Sensor1D_AUSJump_Euler1D_Conservative.cpp
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_AD_AV2D_AUDUSUG.cpp
edit src/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_NavierStokes2D_PrimitiveConstVisc.cpp
edit src/SolutionTrek/Continuation/DissipationBased/DissipationBased.h
edit src/Discretization/VMSD/AlgebraicEquationSet_VMSD.h
edit src/Meshing/FeFloa/MesherInterface_FeFloa.h
edit src/Adaptation/MOESS/ErrorModel/ErrorModel2D.cpp
edit src/Adaptation/MeshAdapter/MeshAdapter_impl.h
edit src/Discretization/HDG/JacobianCell_HDG_HB.h
edit src/Adaptation/MOESS/ProblemStatement_FieldTypes_HDG.h
edit src/Discretization/HDG/AWIntegrandBCFunctor_HDG.h
edit src/SolutionTrek/Continuation/ImplicitResidualSmoothing/AlgebraicEquationSet_IRS.h
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_ArtificialViscositySource_EulerQ1D_Surrogate.cpp
edit src/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_Stabilized.h
edit src/PanelMethod/PiecewiseConstSourcePanel_FlatPlate3D.h
edit src/Adaptation/MOESS/XFieldND_EquilateralRef/XFieldND_EquilateralRef4D.cpp
edit src/Discretization/HDG/AWIntegrandFunctor_HDG.h
edit src/Discretization/VMSD/IntegrandBoundaryTrace_Flux_mitState_VMSD.h
edit src/Adaptation/MOESS/NLOPT/MOESS_SANS_Optimizer_NLOPT/MOESS_SANS_Optimizer_NLOPT_2D.cpp
edit src/Adaptation/MOESS/NLOPT/MOESS_PX_Optimizer_NLOPT/MOESS_PX_Optimizer_NLOPT_3D.cpp
edit src/ErrorEstimate/VMSD/ErrorEstimate_VMSD_Linear.h
edit src/Discretization/Potential_Adjoint/IntegrandBoundaryTrace_WakeCut_CG_LIP_Adjoint.h
edit src/Meshing/EPIC/WriteMeshMetric_Epic.cpp
edit src/Adaptation/MOESS/TAO/MOESS_SANS_Optimizer_TAO/MOESS_SANS_Optimizer_TAO_impl.h
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_RANSSA3D_PrimitiveConstVisc.cpp
edit src/Meshing/refine/refine_grid.cpp
edit src/Discretization/Galerkin/IntegrandBoundaryTrace_Dirichlet_sansLG_Galerkin_manifold.h
edit src/Meshing/libMeshb/XFieldVolume_libMeshb.cpp
edit src/Discretization/HDG/AlgebraicEquationSet_Hubtrace_HDGAdvective.h
edit src/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_ArtificialViscosity_RANSSA3D_PrimitiveSutherland.cpp
edit src/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_AD_AV2D_AUDUSUG.cpp
edit src/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_ArtificialViscosity_BuckleyLeverett1D.cpp
edit src/ErrorEstimate/Galerkin/ErrorEstimate_Galerkin_Stabilized.h
edit src/Meshing/FeFloa/MesherInterface_FeFloa.cpp
edit src/Meshing/EGTess/EGTessellation.h
edit src/Meshing/AFLR/AFLR3.h
edit src/Adaptation/MOESS/CostModel_LogEuclidean/CostModel_LogEuclidean_impl.h
edit src/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_Burgers_AV2D_DUSN.cpp
edit src/Discretization/Potential_Drela/ResidualBoundaryTrace_WakeCut_CG_Potential_Drela.h
edit src/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_TwoPhase2D_LogpnSw.cpp
edit src/Discretization/HDG/Instantiate/AlgebraicEquationSet_HDG_Euler1D_Entropy.cpp
edit src/Meshing/EPIC/MesherInterface_Epic.h
edit src/Discretization/Galerkin/ExtractCGLocalBoundaries/ExtractCGLocalBoundaries4D.cpp
edit src/Adaptation/MOESS/CostModel_LogEuclidean.h
edit src/Meshing/libMeshb/ReadSolution_libMeshb.cpp
edit src/Adaptation/MOESS/NLOPT/ImpliedMetric_Optimizer_NLOPT/ImpliedMetric_Optimizer_NLOPT_1D.cpp
edit src/Discretization/Potential_Adjoint/JacobianBoundaryFrame_CG_Potential_Adjoint.h
edit src/Discretization/HDG/IntegrandBoundaryTrace_Flux_mitState_HDGAdvective.h
edit src/Discretization/VMSD/SolutionData_VMSD.h
edit src/Meshing/AFLR/AFLR2.h
edit src/Adaptation/MOESS/SolverInterface_DGBR2_Block2x2.h
edit src/Discretization/HDG/IntegrandBoundaryTrace_Output_HDG.h
edit src/Discretization/VMSDBR2/IntegrandBoundaryTrace_Robin_sansLG_VMSD_BR2.h
edit src/Adaptation/MeshAdapter/MeshAdapter4D.cpp
edit src/PanelMethod/IntegrandBoundaryTrace_ProjectToQauxi3D.h
edit src/Adaptation/MOESS/NLOPT/ImpliedMetric_Optimizer_NLOPT/ImpliedMetric_Optimizer_NLOPT_2D.cpp
edit src/Discretization/VMSDBR2/AlgebraicEquationSet_VMSD_BR2.h
edit src/Meshing/EPIC/XField_PX.h
edit src/Discretization/HDG/Instantiate/AlgebraicEquationSet_HDG_NavierStokes2D_Conservative_ConstantViscosity.cpp
edit src/ErrorEstimate/Galerkin/ErrorEstimateInteriorTrace_Galerkin.h
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_RANSSA_Source3D_PrimitiveConstVisc.cpp
edit src/Discretization/VMSD/IntegrandBoundaryTrace_LinearScalar_sansLG_VMSD.h
edit src/Adaptation/TargetMetric.h
edit src/ErrorEstimate/Galerkin/ErrorEstimateInteriorTrace_PrimalStrongForm_Galerkin.h

remainder of code changes needed for Field directory restructuring and ElementXField Axes templating,

by allmaras

edit test/unit/Discretization/HDG/SetFieldCell_HDG_AuxiliaryVariable_AD_btest.cpp
edit test/unit/ErrorEstimate/ErrorEstimate_L2_AD_btest.cpp
edit src/SolutionTrek/HarmonicBalance/AlgebraicEquationSet_HarmonicBalance.h
edit test/unit/UnitGrids/XField2D_GilesPierceNozzle_HACK_btest.cpp
edit test/unit/Discretization/HDG/IntegrandTest_HDG.h
edit test/unit/ErrorEstimate/ErrorEstimate_Common_btest.cpp
edit test/unit/Discretization/VMSDBR2/IntegrandCell_VMSD_BR2_AD_btest.cpp
edit test/unit/UnitGrids/XField2D_Box_Mixed_X1_btest.cpp
edit test/unit/Meshing/gmsh/XField_gmsh_btest.cpp
edit test/unit/Discretization/VMSD/JacobianCell_VMSD_AD_btest.cpp
edit test/unit/Discretization/HDG/JacobianFunctionalBoundaryTrace_HDG_sansLG_btest.cpp
edit test/unit/UnitGrids/XField3D_Box_Tet_X1_btest.cpp
edit test/unit/UnitGrids/XField2D_Box_Quad_Lagrange_X1_btest.cpp
edit test/unit/Discretization/HDG/ResidualCell_HDG_AD_btest.cpp
edit test/unit/Discretization/HDG/JacobianCell_HDG_AD_btest.cpp
edit test/unit/Discretization/VMSD/IntegrandCell_VMSD_Output_AD_btest.cpp
edit test/unit/UnitGrids/XField2D_CubicSourceBump_Xq_btest.cpp
edit test/unit/UnitGrids/XField2D_FlatPlate_X1_btest.cpp
edit test/unit/Discretization/HDG/JacobianBoundaryTrace_Flux_mitState_HDG_Euler_btest.cpp
edit test/unit/Discretization/HDG/AuxiliaryAdjoint_HDG_AD_btest.cpp
edit test/unit/Discretization/VMSD/ResidualCell_VMSD_AD_btest.cpp
edit test/unit/Discretization/HDG/JacobianBoundaryTrace_Dirichlet_mitState_HDG_AD_btest.cpp
edit test/unit/Discretization/VMSDBR2/SetFieldBoundaryTrace_VMSDBR2_LO_AD_Dirichlet_mitState_btest.cpp
edit test/unit/Meshing/EPIC/XField_PX_btest.cpp
edit test/unit/UnitGrids/XField4D_2Pentatope_X1_1Group_btest.cpp
edit test/unit/UnitGrids/XField2D_Box_Triangle_Lagrange_X1_btest.cpp
edit test/unit/UnitGrids/XField3D_Box_Hex_X1_btest.cpp
edit test/unit/Discretization/VMSD/AlgebraicEquationSet_VMSD_Triangle_SA_btest.cpp
edit test/unit/Discretization/VMSD/JacobianFunctionalCell_VMSD_AD_btest.cpp
edit test/unit/Meshing/EPIC/WriteSolution_PX_btest.cpp
edit test/unit/Discretization/HDG/AuxiliaryAdjoint_HDG_NS_btest.cpp
edit test/unit/Discretization/VMSDBR2/AlgebraicEquationSet_VMSDBR2_Triangle_AD_btest.cpp
edit test/unit/Meshing/ugrid/XField_ugrid_btest.cpp
edit test/unit/Discretization/VMSD/IntegrandBoundaryTrace_Output_VMSD_btest.cpp
edit test/unit/Discretization/HDG/JacobianBoundaryTrace_LinearScalar_sansLG_HDG_AD_btest.cpp
edit test/unit/Discretization/HDG/JacobianInteriorTrace_HDG_AD_btest.cpp
edit test/unit/Discretization/VMSDBR2/IntegrandTrace_VMSD_BR2_AD_btest.cpp
edit test/unit/UnitGrids/XField3D_ForwardStep_Hex_X1_btest.cpp
edit test/unit/Discretization/VMSDBR2/JacobianCell_VMSD_BR2_AD_btest.cpp
edit test/unit/Discretization/VMSDBR2/AlgebraicEquationSet_VMSDBR2_Triangle_SA_btest.cpp
edit test/unit/Discretization/VMSD/AlgebraicEquationSet_VMSD_Triangle_AD_btest.cpp
edit test/unit/Discretization/HDG/ResidualInteriorTrace_HDG_AD_btest.cpp
edit test/unit/UnitGrids/XField2D_BackwardsStep_X1_btest.cpp
edit test/unit/ErrorEstimate/ErrorEstimateCell_VMSD_AD_btest.cpp
edit test/unit/Discretization/VMSDBR2/ProjectL2_VMSD_BR2_Source_btest.cpp
edit test/unit/Discretization/HDG/JacobianBoundaryTrace_Flux_mitState_HDG_AD_btest.cpp
edit test/unit/UnitGrids/XField2D_Duct_Triangle_Lagrange_Xq_btest.cpp

changes to unit-test libraries needed for all low-level unit_*_build, currently,

by allmaras

edit test/unit/Adaptation/MOESS/XFieldND_EquilateralRef_btest.cpp
edit test/unit/Meshing/Embedding/CMakeLists.txt
edit test/unit/Meshing/refine/CMakeLists.txt
edit test/unit/UnitGrids/CMakeLists.txt
edit test/unit/pde/FullPotential/CMakeLists.txt
edit test/unit/Adaptation/MOESS/MMA/CMakeLists.txt
edit test/unit/Discretization/DG/AlgebraicEquationSet_DGBR2_Quad_SA_btest.cpp
edit test/unit/Discretization/DG/AlgebraicEquationSet_DGBR2_Triangle_SA_btest.cpp
edit test/unit/Meshing/AFLR/CMakeLists.txt
edit test/unit/Meshing/libMeshb/CMakeLists.txt
edit test/unit/Discretization/VMSD/CMakeLists.txt
edit test/unit/Adaptation/MOESS/NLOPT/CMakeLists.txt
edit test/unit/Adaptation/MOESS/ParamFieldBuilder_btest.cpp
edit test/unit/Discretization/FV_TPFA/CMakeLists.txt
edit test/unit/Discretization/GloballyConstrained/CMakeLists.txt
edit test/unit/Discretization/VMSDBR2/CMakeLists.txt
edit test/unit/Meshing/XField1D/CMakeLists.txt
edit test/unit/Meshing/avro/CMakeLists.txt
edit test/unit/Meshing/gmsh/CMakeLists.txt
edit test/unit/SolutionTrek/TimeMarching/CMakeLists.txt
edit test/unit/Meshing/TetGen/CMakeLists.txt
edit test/unit/Adaptation/MOESS/CMakeLists.txt
edit test/unit/SolutionTrek/HarmonicBalance/CMakeLists.txt
edit test/unit/pde/Sensor/CMakeLists.txt
edit test/unit/Discretization/DG/CMakeLists.txt
edit test/unit/SolutionTrek/Continuation/CMakeLists.txt
edit test/unit/ErrorEstimate/CMakeLists.txt
edit test/unit/Discretization/Block/CMakeLists.txt
edit test/unit/NonLinearSolver/CMakeLists.txt
edit test/unit/UserInterfaces/CMakeLists.txt
edit test/unit/PanelMethod/CMakeLists.txt
edit test/unit/Meshing/FeFloa/CMakeLists.txt
edit test/unit/Meshing/EGTess/CMakeLists.txt
edit test/unit/Meshing/EPIC/CMakeLists.txt
edit test/unit/Adaptation/MOESS/TAO/CMakeLists.txt
edit test/unit/Discretization/HDG/CMakeLists.txt
edit test/unit/Meshing/ugrid/CMakeLists.txt
edit test/unit/Discretization/Galerkin/CMakeLists.txt
edit test/unit/Meshing/EGADS/CMakeLists.txt
edit test/unit/Discretization/CG/CMakeLists.txt
edit test/unit/Meshing/Pointwise/CMakeLists.txt
edit test/unit/pde/IBL/CMakeLists.txt

renamed class &, files. re-org include. , started a LIP+IBL3 sandbox case by copying over FP-IBL3

by shunz

edit src/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PiecewiseConstSourcePanel_FlatPlate3D.h
edit test/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_HubtraceHDGAdvIBL_CutCellNaturalTransition_Panel_btest.cpp
edit test/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cpp
edit test/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cpp
edit test/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_HDGAdvIBL_Panel_btest.cpp
edit test/system/CodeConsistency/Solve2D_Coupled4x4_IBLSplitAmpLag_CorrelationClosure_CapturedTransition_PTC_btest.cpp
edit test/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cpp
edit test/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cpp
edit src/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_XfoilPanel.h
edit test/sandbox/Solve2D_Coupled4x4_IBL_fx67k170_drag_polar_toy.cpp
edit test/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cpp
edit src/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_FullPotential3D.h
edit test/system/CodeConsistency/Solve2D_Coupled4x4_IBL_Panel_NACA0004_FittedTransition_TwoLayerNewton_btest.cpp
edit test/sandbox/Solve2D_Coupled4x4_IBL_fx67k170_single_run_toy.cpp
edit test/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_IBL_Panel_btest.cpp
edit test/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Triangle_btest.cpp
edit test/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellForcedTransitionIBL_Panel_btest.cpp
add test/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cpp
edit test/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellNaturalTransitionIBL_Panel_btest.cpp

refactored some explicit instantiations for better generality and less tedious code

by shunz

edit src/LinearAlgebra/NonZeroPatternType.h
edit test/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cpp
edit src/LinearAlgebra/SparseLinAlg/ScalarMatrix_CRS_int.cpp
edit src/LinearAlgebra/VectorType.h
edit src/pde/FullPotential/PDELinearizedIncompressiblePotential3D.h

use MatrixS_or_T instead of MatrixS to account for the case of MatrixQ=Real

by shunz

edit src/pde/IBL/JacobianParam_FullPotential_Qauxi.h

rename/reorg files/classes to remove FullPotential 3D specificity from Auxv equation implementation

by shunz

edit test/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cpp
edit test/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cpp
edit test/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cpp

Relocated Matrix PDE_Qauxi typedef into PDE class in lieu of integrand class

by shunz

edit src/Discretization/Galerkin/JacobianBoundaryTrace_Galerkin_DerivativeWithBCDataFieldQauxi.h
edit src/pde/FullPotential/PDEFullPotential3D.h
edit src/pde/FullPotential/PDELinearizedIncompressiblePotential3D.h
edit src/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.h

make a method protected as it is not a necessary API for mitLG BC

by shunz

edit src/pde/IBL/BCIBL3D.h

Add comments. , Make basis functions class members to reduce re-allocating memory during operator calls

by shunz

edit src/Discretization/Galerkin/IntegrandBoundaryTrace_Dirichlet_mitLG_Galerkin.h
edit src/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.h

Refactored LIP PDE to prep it to be run with coupled IBL3. , Added Dirichlet_mitLG BC for LIP

by shunz

edit test/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cpp
edit src/pde/FullPotential/PDELinearizedIncompressiblePotential3D.h
add src/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_Galerkin_LIP_HACK.h
edit src/pde/NDConvert/BCNDConvertSpace3D.h
edit src/pde/FullPotential/BCLinearizedIncompressiblePotential3D.h
edit src/pde/FullPotential/BCLinearizedIncompressiblePotential3D.cpp

Replaced tedious &, repetitive block matrix instantiation statements with macro definitions. Added explicit instantiations for MatrixBlock_4x4 for LIP-IBL3 coupling

by shunz

edit src/LinearAlgebra/SparseLinAlg/Krylov/FGMRES_MatrixBlock_4x4_Instantiate.cpp
edit src/NonLinearSolver/NewtonSolver_MatrixBlock_3x3_Instantiate.cpp
edit src/LinearAlgebra/SparseLinAlg/Krylov/FGMRES_MatrixBlock_3x3_Instantiate.cpp
edit src/LinearAlgebra/SparseLinAlg/ScalarMatrix_CRS_int.cpp
edit src/LinearAlgebra/SparseLinAlg/Direct/MKL_PARDISO/MKL_PARDISOSolver_MatrixBlock_4x4_Instantiate.cpp
edit src/LinearAlgebra/SparseLinAlg/Direct/UMFPACK/UMFPACKSolver_MatrixBlock_3x3_Instantiate.cpp
edit src/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_MatrixBlock_4x4_Instantiate.cpp
edit src/LinearAlgebra/SparseLinAlg/Direct/MKL_PARDISO/MKL_PARDISOSolver_MatrixBlock_3x3_Instantiate.cpp
edit src/NonLinearSolver/LineUpdate/HalvingSearchLineUpdate_MatrixBlock_4x4_Instantiate.cpp
edit src/NonLinearSolver/NewtonSolver_MatrixBlock_4x4_Instantiate.cpp
edit src/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_MatrixBlock_3x3_Instantiate.cpp
edit src/LinearAlgebra/SparseLinAlg/Direct/UMFPACK/UMFPACKSolver_MatrixBlock_4x4_Instantiate.cpp

Replaced tedious &, repetitive block matrix instantiation statements with macro definitions. Added explicit instantiations for MatrixBlock_4x4 for LIP-IBL3 coupling

by shunz

edit src/LinearAlgebra/SparseLinAlg/ScalarMatrix_CRS_int.cpp
edit src/LinearAlgebra/SparseLinAlg/Krylov/FGMRES_MatrixBlock_4x4_Instantiate.cpp
edit src/NonLinearSolver/NewtonSolver_MatrixBlock_3x3_Instantiate.cpp
edit src/LinearAlgebra/SparseLinAlg/Krylov/FGMRES_MatrixBlock_3x3_Instantiate.cpp
edit src/LinearAlgebra/SparseLinAlg/Direct/MKL_PARDISO/MKL_PARDISOSolver_MatrixBlock_3x3_Instantiate.cpp
edit src/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_MatrixBlock_3x3_Instantiate.cpp
edit src/NonLinearSolver/NewtonSolver_MatrixBlock_4x4_Instantiate.cpp
edit src/LinearAlgebra/SparseLinAlg/Direct/UMFPACK/UMFPACKSolver_MatrixBlock_4x4_Instantiate.cpp
edit src/LinearAlgebra/SparseLinAlg/Direct/MKL_PARDISO/MKL_PARDISOSolver_MatrixBlock_4x4_Instantiate.cpp
edit src/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_MatrixBlock_4x4_Instantiate.cpp
edit src/LinearAlgebra/DenseLinAlg/StaticSize/MatMul/MatrixS_MatMul_Native_Real_Instantiate.cpp
edit src/NonLinearSolver/LineUpdate/HalvingSearchLineUpdate_MatrixBlock_4x4_Instantiate.cpp
edit src/LinearAlgebra/SparseLinAlg/Direct/UMFPACK/UMFPACKSolver_MatrixBlock_3x3_Instantiate.cpp

fixed some lingering merge conflicts

by shunz

edit src/LinearAlgebra/SparseLinAlg/Direct/MKL_PARDISO/MKL_PARDISOSolver_MatrixBlock_3x3_Instantiate.cpp
edit src/LinearAlgebra/SparseLinAlg/Direct/MKL_PARDISO/MKL_PARDISOSolver_MatrixBlock_4x4_Instantiate.cpp

refactored miscellaneous unit tests. added missing explicit instantiation for 4x4 block matrix

by shunz

edit src/LinearAlgebra/SparseLinAlg/ScalarMatrix_CRS_int.cpp
edit test/unit/IO/BlockLinAlg/MatrixBlock4x4_MatrixD_SparseMatrix_CRS_MatrixS.mm
edit src/pde/FullPotential/PDELinearizedIncompressiblePotential3D.h
edit test/unit/pde/FullPotential/PDELinearizedIncompressiblePotential3D_btest.cpp
edit test/unit/LinearAlgebra/BlockLinAlg/MatrixBlock_4x4_SparseMatrix_CRS_btest.cpp

added option of Dirichlet_mitLG for LIP test -->, result matches LinearScalar_sansLG, so not need bother with mitLG

by shunz

edit test/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cpp

minor cleanup

by shunz

edit src/pde/FullPotential/BCFullPotential3D.h
edit src/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.h

add state validity check assertions for Auxv projection integrand class

by shunz

edit test/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cpp
edit src/pde/IBL/IntegrandCell_ProjectToQauxv3D.h
edit src/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_3D.h

refactored LIP BC and PDE to enable coupled LIP-IBL3 test case to run

by shunz

edit test/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cpp
edit src/pde/FullPotential/BCLinearizedIncompressiblePotential3D.cpp
edit src/pde/FullPotential/BCLinearizedIncompressiblePotential3D.h
edit test/unit/IO/pde/BCLinearizedIncompressiblePotential3D_pattern.txt
edit src/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_Galerkin_LIP_HACK.h
edit src/pde/FullPotential/PDELinearizedIncompressiblePotential3D.h

simply renamed some variables for brevity

by shunz

edit src/pde/IBL/BCIBL3D.h
edit test/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cpp
edit test/sandbox/Solve3D_Uncoupled_IBL_FlatPlate_Blasius_toy.cpp
edit test/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cpp
edit test/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cpp
edit src/pde/IBL/BCIBL3D.cpp
edit test/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cpp
edit test/sandbox/Solve3D_Uncoupled_IBLFourEqn_FlatPlate_Blasius_toy.cpp
edit test/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cpp
edit test/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cpp
edit test/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Triangle_btest.cpp

speed up LIP-IBL3 run by initializing with Falkner-Skan solution and solving IBL3 in uncoupled mode

by shunz

edit test/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cpp

make IBL3 LF vs Full upwind flux choice a runtime decision

by shunz

edit src/pde/IBL/PDEIBLFourEqn3D.h
edit test/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cpp

fix typos that caused compile errors

by shunz

edit src/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.h
edit src/pde/IBL/PDEIBLFourEqn3D.h

add unit tests to 4-equation 3D IBL PDE

by shunz

add test/unit/pde/IBL/PDEIBLFourEqn3D_btest.cpp

add explicit instantiation

by shunz

edit src/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_MatrixBlock_4x4_Instantiate.cpp

set minimum IBL output field order to be 1

by shunz

edit test/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cpp

mods to top level libraries list so ',make unit_build', now successfully works

by allmaras

edit CMakeLists.txt

add/refactor explicit instantiations

by shunz

edit test/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cpp
edit src/LinearAlgebra/SparseLinAlg/Krylov/FGMRES_MatrixBlock_3x3_Instantiate.cpp
edit src/NonLinearSolver/LineUpdate/HalvingSearchLineUpdate_MatrixBlock_3x3_Instantiate.cpp
edit src/LinearAlgebra/SparseLinAlg/Direct/MKL_PARDISO/MKL_PARDISOSolver_MatrixBlock_3x3_Instantiate.cpp
edit src/LinearAlgebra/DenseLinAlg/StaticSize/MatMul/MatrixS_MatMul_Native_Surreal_Instantiate.cpp

removed some library coupling by moving Field/Partition to Field/XField/Partition

by allmaras

edit test/unit/Adaptation/MOESS/CMakeLists.txt
edit test/unit/Field/HField/CMakeLists.txt
edit test/unit/UnitGrids/XField3D_Box_Hex_X1.cpp
edit test/unit/Discretization/HDG/CMakeLists.txt
edit test/unit/Meshing/refine/CMakeLists.txt
edit test/unit/Field/Local/Field_LocalPatch_toolkit_btest.h
edit test/unit/Adaptation/MOESS/MMA/CMakeLists.txt
edit src/Adaptation/MOESS/ParamFieldBuilder.h
edit test/unit/Meshing/libMeshb/CMakeLists.txt
edit test/unit/Field/XField/XField_Lagrange_Partition_btest.cpp
edit test/unit/Discretization/GloballyConstrained/CMakeLists.txt
edit src/Adaptation/MOESS/ParamFieldBuilder_Block2.h
edit test/unit/Meshing/gmsh/CMakeLists.txt
edit test/unit/Field/Local/Field1D_LocalPatch_Element_DG_btest.cpp
edit src/Field/HField/GenHField_CG.h
edit test/unit/Discretization/Galerkin/AlgebraicEquationSet_Local_Galerkin_Stabilized_Triangle_AD_btest.cpp
edit src/Meshing/ugrid/XFieldVolume_ugrid.cpp
edit test/unit/Discretization/Galerkin/ExtractCGLocalBoundaries_btest.cpp
edit src/Field/HField/GenHField_DG.h
edit src/Adaptation/MOESS/ReferenceStepMatrix.h
edit test/unit/SolutionTrek/TimeMarching/CMakeLists.txt
edit test/unit/Adaptation/MOESS/AnisotropicStepCalculation_btest.cpp
edit src/Meshing/EPIC/XField_PX.cpp
edit src/Meshing/libMeshb/XFieldArea_libMeshb.cpp
edit src/Adaptation/MOESS/SolverInterface_L2Project.h
edit src/Field/XField/XFieldLine_impl.h
edit test/unit/Field/Local/CMakeLists.txt
edit test/unit/UnitGrids/XField2D_FlatPlate_X1.cpp
edit test/unit/Field/Field_CG/CMakeLists.txt
edit src/Field/Local/FieldLift_Local.h
edit test/unit/UnitGrids/XField3D_CornerFlatPlate_X1.cpp
edit test/unit/Field/XField/CMakeLists.txt
edit test/unit/Discretization/HDG/AlgebraicEquationSet_Local_HDG_Triangle_AD_btest.cpp
edit test/unit/UnitGrids/XField2D_Box_Triangle_Lagrange_X1.cpp
edit CMakeLists.txt
edit src/Field/XField/XFieldSpacetime_impl.h
edit src/Field/XField/XField_impl.h
edit test/unit/Discretization/DG/CMakeLists.txt
edit test/unit/Meshing/AFLR/CMakeLists.txt
edit test/unit/NonLinearSolver/CMakeLists.txt
edit test/unit/Discretization/VMSD/CMakeLists.txt
edit src/Field/CMakeLists.txt
edit test/unit/Field/Field_NodalView_btest.cpp
edit test/unit/Field/Local/Field2D_LocalPatch_Element_DG_btest.cpp
edit test/unit/UnitGrids/XField3D_ForwardStep_Hex_X1.cpp
edit test/unit/Discretization/Galerkin/AlgebraicEquationSet_Local_Galerkin_Stabilized_Triangle_Euler_btest.cpp
edit test/unit/Discretization/Galerkin/CMakeLists.txt
edit test/unit/Discretization/CG/CMakeLists.txt
edit test/unit/UnitGrids/XField2D_BackwardsStep_X1.cpp
edit test/unit/PanelMethod/CMakeLists.txt
edit test/unit/Meshing/XField1D/CMakeLists.txt
edit src/Meshing/EPIC/SolutionField_PX.cpp
edit src/Meshing/avro/XField_avro_impl.h
edit test/unit/Discretization/DG/AlgebraicEquationSet_Local_DGBR2_Triangle_AD_btest.cpp
edit test/unit/UnitGrids/XField2D_GilesPierceNozzle_HACK.cpp
edit test/unit/Meshing/avro/CMakeLists.txt
edit test/unit/Discretization/HDG/AlgebraicEquationSet_Local_HDG_Line_AD_btest.cpp
edit test/unit/ErrorEstimate/ErrorEstimate_L2_AD_btest.cpp
edit src/Meshing/ugrid/XFieldArea_ugrid.cpp
edit test/unit/Field/Field_EG/CMakeLists.txt
edit test/unit/UnitGrids/XField2D_Box_Quad_Lagrange_X1.cpp
edit test/unit/Meshing/EGADS/CMakeLists.txt
edit test/unit/Adaptation/MOESS/ParamFieldBuilder_btest.cpp
edit test/unit/Meshing/EGTess/CMakeLists.txt
edit src/Meshing/AFLR/AFLR3.cpp
edit test/unit/Meshing/EPIC/CMakeLists.txt
edit test/unit/UnitGrids/XField2D_Box_Mixed_X1.cpp
edit src/Meshing/gmsh/XField_gmsh.h
edit src/Meshing/refine/XField_refine.cpp
edit test/unit/Field/HField/GenHField_CG_btest.cpp
edit test/unit/UnitGrids/XField4D_6Pentatope_X1_1Group_NegativeTraceOrientation.cpp
edit test/unit/Field/Field_DG/CMakeLists.txt
edit src/Meshing/libMeshb/XFieldVolume_libMeshb.cpp
edit test/unit/Adaptation/MOESS/ParamFieldBuilder_Block2_btest.cpp
edit test/unit/UnitGrids/XField4D_24Pentatope_X1_1Group.cpp
edit src/Field/XField/XFieldArea_impl.h
edit src/Field/Local/FieldLiftBoundary_Local.h
edit src/Adaptation/MOESS/SolverInterface_DGBR2_Block2x2.h
edit test/unit/Meshing/FeFloa/CMakeLists.txt
edit test/unit/SolutionTrek/Continuation/CMakeLists.txt
add test/unit/Field/XField/Local/CMakeLists.txt
edit test/unit/UnitGrids/XField4D_Box_Pentatope_X1.cpp
edit test/unit/Adaptation/MOESS/ErrorModel_btest.cpp
edit test/unit/UnitGrids/XField3D_FlatPlate_X1.cpp
edit test/unit/Adaptation/MOESS/TAO/CMakeLists.txt
edit test/unit/Meshing/Embedding/CMakeLists.txt
edit test/unit/UnitGrids/XField2D_ForwardStep_Quad_X1.cpp
edit test/unit/Adaptation/MOESS/NLOPT/CMakeLists.txt
edit test/unit/UnitGrids/XField2D_Box_UnionJack_Triangle_X1.cpp
edit test/unit/SolutionTrek/HarmonicBalance/CMakeLists.txt
edit test/unit/Discretization/Block/CMakeLists.txt
edit test/unit/Field/HField/GenHField_DG_btest.cpp
edit src/Field/XField/XFieldVolume_impl.h
edit src/ErrorEstimate/Galerkin/ErrorEstimateNodalBase_Galerkin.cpp
edit src/Meshing/gmsh/XField_gmsh.cpp
edit test/unit/ErrorEstimate/CMakeLists.txt
edit src/Adaptation/MOESS/ProblemStatement_HDG_ErrorEstimate.h
edit src/Adaptation/TargetMetric.h
edit test/unit/Discretization/FV_TPFA/CMakeLists.txt
edit test/unit/Meshing/TetGen/CMakeLists.txt
edit src/Adaptation/MOESS/SolverInterface.h
edit src/Adaptation/MOESS/ErrorModel/ErrorModel_impl.h
edit src/ErrorEstimate/ErrorEstimate_L2.h
edit test/unit/Meshing/Pointwise/CMakeLists.txt
edit src/Field/Local/Field_Local.h
edit test/unit/Field/XField/XField_Lagrange_btest.cpp
edit src/Field/XField/CMakeLists.txt
edit test/unit/Meshing/ugrid/CMakeLists.txt
edit test/unit/Discretization/VMSDBR2/CMakeLists.txt
edit src/Adaptation/MOESS/SolverInterfaceBase.h
edit test/unit/Field/Local/Field1D_LocalPatch_Edge_CG_btest.cpp
edit test/unit/UnitGrids/XField3D_Box_Tet_X1.cpp
edit src/ErrorEstimate/VMSD/ErrorEstimateBase_VMSD.cpp
edit test/unit/ErrorEstimate/ErrorEstimate_Common_btest.cpp
edit test/unit/ErrorEstimate/ErrorEstimateNodal_Galerkin_AD_btest.cpp
edit test/unit/Field/CMakeLists.txt

fixed issues with uninitialized data in boundary integand, which became a problem due to recent refactoring to 3D LIP BC (i.e. swtich from assignment to cumulation in data(...)). , Some other fixes to compile warnings

by shunz

edit src/Discretization/Galerkin/IntegrandBoundaryTrace_LinearScalar_sansLG_Galerkin.h
edit src/pde/FullPotential/BCLinearizedIncompressiblePotential3D.h

Implementing N wave problem for Burgers using Advection Diffusion

by cwomack

add test/sandbox/Adapt2D_DGBR2_AD_ST_Burgers_toy.cpp
edit src/pde/AnalyticFunction/ScalarFunction1D.h
edit src/pde/AnalyticFunction/ScalarFunction1D.cpp
edit test/unit/IO/pde/ScalarFunction1D_pattern.txt
edit test/unit/pde/AnalyticFunction/ScalarFunction1D_btest.cpp

Removed one variable.

by cwomack

edit test/sandbox/Adapt2D_DGBR2_AD_ST_Burgers_toy.cpp

Tried a few more duct geometries for IBL3

by shunz

edit test/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cpp
edit test/unit/UnitGrids/XField3D_Box_Hex_X1.cpp
edit test/unit/UnitGrids/XField3D_Box_Hex_X1.h

fix for messed up merge conflict

by allmaras

edit src/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.h

fix typo in comments

by shunz

edit test/unit/UnitGrids/XField3D_BoxBoundary_Quad_X1.h

fix for messed up merge conflict

by allmaras

edit src/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.h

added template Axes to XField

by allmaras

edit src/Field/XField/XFieldArea.h
edit src/Field/XField/XFieldVolume_checkGrid_impl.h
edit src/Field/XField/XFieldLine_checkGrid_impl.h
edit src/Field/XField/XField_impl.h
edit src/Field/XField/XFieldVolume_buildFrom_impl.h
edit src/Field/XField/XFieldLine_Traits.h
edit src/Field/XField/XFieldSpacetime_buildFrom_impl.h
edit src/Field/XField/XFieldLine_Instantiate_2D.cpp
edit src/Field/XField/XFieldLine.h
edit src/Field/XField/XFieldTypes.h
edit src/Field/XField/XFieldVolume.h
edit src/Field/XField/XField.h
edit src/Field/XField/XFieldLine_impl.h
edit src/Field/XField/XFieldSpacetime_impl.h
edit src/Field/XField/XFieldSpacetime_checkGrid_impl.h
edit src/Field/XField/XFieldSpacetime.h
edit src/Field/XField/XField_checkTraceNormal_impl.h
edit src/Field/XField/XFieldArea_buildFrom_impl.h
edit src/Field/XField/XFieldVolume_impl.h
edit src/Field/XField/XFieldVolume_Traits.h
edit src/Field/FieldTypes.h
edit src/Field/XField/XFieldArea_Traits.h
edit src/Field/XField/XFieldLine_buildFrom_impl.h
edit src/Field/XField/XFieldArea_Instantiate_3D.cpp
edit src/Field/XField/XFieldArea_impl.h
edit src/Field/XField/XFieldNode_Traits.h
edit src/Field/XField/XFieldArea_checkGrid_impl.h
edit src/Field/XField/XFieldSpacetime_Traits.h

Added Darmofal changes to Nwave code.

by cwomack

edit test/sandbox/Adapt2D_DGBR2_AD_ST_Burgers_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_Burgers_ST_toy.cpp

added checks on SANS_AVRO and SANS_REFINE

by allmaras

edit test/sandbox/Adapt2D_DGAdvective_Euler_Joukowski_Pointwise_toy.cpp

More changes

by cwomack

edit src/pde/AdvectionDiffusion/OutputAdvectionDiffusion1D.h
edit src/pde/AnalyticFunction/ScalarFunction1D.h

Changed OutputNDConvert to match Dave',s

by cwomack

edit src/pde/NDConvert/OutputNDConvertSpaceTime1D.h

add a manifold (area) grid based on four sides of a box that form a ring

by shunz

add test/unit/UnitGrids/XField3D_BoxBoundaries_Quad_X1.h
edit test/unit/UnitGrids/CMakeLists.txt
add test/unit/UnitGrids/XField3D_BoxBoundaries_Quad_X1.cpp
add test/unit/UnitGrids/XField3D_BoxBoundaries_Quad_X1_btest.cpp
edit test/unit/UnitGrids/XField3D_BoxBoundary_Quad_X1_btest.cpp

Added deanna.sewell@colorado.edu to DeveloperEmailAddresses

by deanna.sewell

edit DeveloperEmailAddresses

add to unit tests of BoxBoundaries grid (duct ring)

by shunz

edit test/unit/UnitGrids/XField3D_BoxBoundaries_Quad_X1_btest.cpp

reverted OutputCell_SolutionErrorSquared to its former functionality (input is Real/VectorS,

by allmaras

edit src/pde/OutputCell_SolutionErrorSquared.h
edit test/unit/pde/OutputCell_SolutionErrorSquared_btest.cpp
add src/pde/OutputCell_SolutionErrorL2.h
add test/unit/pde/OutputCell_SolutionErrorL2_btest.cpp

Added mitStateSpaceTime BC for 1D Advection Diffusion

by cwomack

edit src/pde/Burgers/BCBurgers1D.h
edit src/pde/AdvectionDiffusion/BCAdvectionDiffusion1D.h
edit src/pde/Burgers/BCBurgers1D.cpp
edit src/pde/AdvectionDiffusion/BCAdvectionDiffusion1D.cpp
edit test/sandbox/Adapt2D_DGBR2_AD_ST_Burgers_toy.cpp
edit src/pde/BCParameters.h

sans-Lagrange adiabatic &, isothermal no-slip BCs for NS

by allmaras

add test/unit/pde/NS/BCNavierStokes2D_Robin_sansLG_btest.cpp
edit src/pde/NS/BCNavierStokes3D_Robin_sansLG.h
edit test/unit/pde/NS/BCNavierStokes3D_Robin_sansLG_btest.cpp
add src/pde/NS/BCNavierStokes2D_Robin_sansLG.h

relaxed tolerance on unit test

by allmaras

edit test/unit/Discretization/Galerkin/JacobianCell_Galerkin_AD_ArtificialViscosity_btest.cpp

modified speedCharacteristic for AD with zero advective flux

by allmaras

edit test/unit/pde/Distance/PDEEikonal_Distance2D_btest.cpp
edit src/pde/AdvectionDiffusion/PDEAdvectionDiffusion2D.h

refactoring of BoxBoundary grid: group indexing and area_cell to volume_boundary mapping

by shunz

edit test/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cpp
edit test/unit/Field/Field_DG_BoundaryTrace_matchAreaCell_btest.cpp
edit test/unit/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_3D_btest.cpp
edit test/sandbox/Solve3D_CG_FP_duct_toy.cpp
edit test/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cpp
edit test/unit/UnitGrids/XField3D_BoxBoundary_Quad_X1_btest.cpp
edit test/unit/UnitGrids/XField3D_BoxBoundary_Quad_X1.h
edit test/unit/UnitGrids/XField3D_BoxBoundary_Quad_X1.cpp
edit test/unit/UnitGrids/XField3D_BoxBoundaries_Quad_X1.cpp

add a test case of LIP-IBL3 for IBL3 on a duct ring (i.e. 4 side walls of a box)

by shunz

add test/sandbox/Solve3D_Coupled_LIP_IBL3_duct_ring_toy.cpp

added sans-Lagrange no-slip BC types to 2D NS

by allmaras

edit src/pde/NS/BCNavierStokes2D.cpp
edit src/pde/NS/BCNavierStokes2D.h

added Axes consistency check between NDPDE',s and XField',s in AlgebraicEquationSet',s,

by allmaras

edit src/pde/NDConvert/PDENDConvertSpaceTime3D.h
edit src/Discretization/VMSD/AlgebraicEquationSet_VMSD.h
edit src/Field/ProjectSoln/Project_DG_to_CG/Project_DG_to_CG_impl.h
edit src/Field/Tuple/FieldTuple.h
edit src/Discretization/DG/AlgebraicEquationSet_DGAdvective.h
edit src/Discretization/Potential_Adjoint/AlgebraicEquationSet_CG_Potential_Adjoint.h
edit src/pde/NDConvert/PDENDConvertSpaceTime1D.h
edit src/Discretization/FV_TPFA/AlgebraicEquationSet_FV_TPFA.h
edit src/SolutionTrek/TimeMarching/AlgebraicEquationSet_TimeStep.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Galerkin.h
edit src/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_CutcellTransitionIBL.h
edit src/pde/NDConvert/PDENDConvertSpaceTime2D.h
edit src/pde/NDConvert/PDENDConvertSpace2D.h
edit src/PanelMethod/XfoilPanelEquationSet.h
edit src/pde/NDConvert/PDENDConvertSpace1D.h
edit src/Discretization/Potential_Drela/AlgebraicEquationSet_CG_Potential_Drela.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_Stabilized_LiftedBoundary.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_Stabilized.h
edit src/Discretization/HDG/AlgebraicEquationSet_HDG.h
edit src/Discretization/DG/AlgebraicEquationSet_DGBR2.h
edit src/Discretization/AlgebraicEquationSet_Debug.h
edit src/pde/NDConvert/PDENDConvertSpace3D.h
edit src/Discretization/DG/AlgebraicEquationSet_TransitionIBL.h
edit src/SolutionTrek/Continuation/Homotopy/PDEHomotopy.h
edit src/Discretization/Potential_Adjoint/AlgebraicEquationSet_CG_Potential_Virtual.h
edit src/Discretization/HDG/AlgebraicEquationSet_HDGAdvective.h
edit src/PanelMethod/XfoilPanel.h
edit src/SolutionTrek/HarmonicBalance/AlgebraicEquationSet_HarmonicBalance.h
edit src/Discretization/VMSD/AlgebraicEquationSet_VMSD_Linear.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.h
edit src/Discretization/VMSDBR2/AlgebraicEquationSet_VMSD_BR2.h

MatrixS_MatMul instantiations needed for sans-Lagrange no-slip BCs for NS

by allmaras

edit src/LinearAlgebra/DenseLinAlg/StaticSize/MatMul/MatrixS_MatMul_Native_MatrixS_Instantiate.cpp

fixed includes, etc, in sandbox to be consistent with Field refactoring and ElementXField<,...Axes>,,

by allmaras

edit test/sandbox/Solve1D_HDG_Burgers_HTC_toy_LGOFF.cpp
edit test/sandbox/Adapt2D_DGBR2_L2_BoundaryLayer_toy.cpp
edit test/sandbox/ErrorOrder_2D_DGBR2_Triangle_AD_toy.cpp
edit test/sandbox/Solve1D_DGBR2_Line_NS_Nozzle_toy.cpp
edit test/sandbox/Solve2D_EDG_Line_Euler_Sod_ST_toy.cpp
edit test/sandbox/Adapt2D_VMSDBR2_AD_DoubleBoundaryLayer_toy.cpp
edit test/sandbox/Solve1D_HDG_Line_Euler_Sod_ST_toy.cpp
edit test/sandbox/Solve2D_CG_Triangle_Euler_CubicSource_toy.cpp
edit test/sandbox/Solve2D_DGBR2_Triangle_Euler_RAE2822_ArtificialViscosity_toy.cpp
edit test/sandbox/Adapt3D_VMSD_TwoPhase_ArtificialViscosity_ST_SPE10_toy.cpp
edit test/sandbox/CurveGrid_toy.cpp
edit test/sandbox/Solve2D_DGBR2_HOW5_VI2_AV_toy.cpp
edit test/sandbox/Adapt3D_VMSD_NavierStokes_DeltaWing_Chain_toy.cpp
edit test/sandbox/Adapt2D_Galerkin_Stabilized_Helmholtz_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_BuckleyLeverett_ArtificialViscosity_ST_toy.cpp
edit test/sandbox/Adapt4D_VMSD_AD_ST_AdvectiveField_toy.cpp
edit test/sandbox/Solve1D_DGBR2_TwoPhaseLinearized_BDF_toy.cpp
edit test/sandbox/Solve2D_DGAdvective_Triangle_Euler_Surrogate_CubicSource_toy.cpp
edit test/sandbox/Solve2D_Coupled4x4_IBLSplitAmpLag_CorrelationClosure_CapturedTransition_PTC_toy.cpp
edit test/sandbox/Solve2D_CGStabilized_Triangle_NavierStokes_Joukowski_toy.cpp
edit test/sandbox/Solve2D_CGStabilized_Triangle_Euler_NACA0012_ArtificialViscosity_toy.cpp
edit test/sandbox/Adapt2D_VMSD_AD_DoubleBoundaryLayer_toy.cpp
edit test/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cpp
edit test/sandbox/Solve3D_DGBR2_RANSSA_OjedaMMS_toy.cpp
edit test/sandbox/Adapt2D_VMSDBR2_NavierStokes_ParkMMS_toy.cpp
edit test/sandbox/Solve3D_Galerkin_Stabilized_AD_TripleBoundaryLayer_toy.cpp
edit test/sandbox/Adapt1D_DGBR2_Line_Euler_GilesPierce_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_TwoPhase_Steady_QuarterFiveSpot_toy.cpp
edit test/sandbox/Solve2D_DGAdvective_HOW5_VI2_toy.cpp
edit test/sandbox/Adapt3D_DGBR2_RANSSA_HCH_toy.cpp
edit test/sandbox/Solve2D_DGBR2_Euler_ForwardStep_AV_ST_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_Triangle_RANSSA_Joukowski_Transonic_ArtificialViscosity_toy.cpp
edit test/sandbox/Solve1D_DGAdvective_Line_Euler_Nozzle_toy.cpp
edit test/sandbox/Solve3D_CG_xtNonLinPoisson_RK_toy.cpp
edit test/sandbox/Solve4D_VMSD_AD_ST_ExpandingSphericalWave_toy.cpp
edit test/sandbox/Solve1D_HDG_Line_Euler_Sod_toy_LGOFF.cpp
edit test/sandbox/Adapt2D_DGBR2_NavierStokes_FlatPlate_toy.cpp
edit test/sandbox/Adapt3D_DGBR2_NavierStokes_DeltaWing_MultiScaleMetric_toy.cpp
edit test/sandbox/Solve1D_DGAdvective_BuckleyLeverett_ST_toy.cpp
edit test/sandbox/Solve3D_Galerkin_Stabilized_AD_ST_toy.cpp
edit test/sandbox/Adapt2D_Galerkin_Stabilized_L2_CornerSingularity_toy.cpp
edit test/sandbox/Adapt4D_L2Project_MOESS_toy.cpp
edit test/sandbox/Solve1D_VMSD_AD_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_TwoPhase_ST_toy.cpp
edit test/sandbox/Solve2D_DGBR2_TwoPhase_ArtificialViscosity_SPE10_BDF_toy.cpp
edit test/sandbox/Solve2D_L2Project_MOESS_toy.cpp
edit test/sandbox/Adapt2D_VMSD_RANSSA_AV_MultiElementAirfoil_Q1_toy.cpp
edit test/sandbox/Adapt2D_VMSD_RANSSA_MultiElementAirfoil_Q1_toy.cpp
edit test/sandbox/Solve2D_DGBR2_Triangle_NavierStokes_FlatPlate_toy.cpp
edit test/sandbox/duct_meshing_UROP_toy.cpp
edit test/sandbox/Adapt2D_VMSDBR2_NavierStokes_Blottner_Mach20_AV_HTC_toy.cpp
edit test/sandbox/Adapt3D_DGBR2_Burgers_ST_toy.cpp
edit test/sandbox/Solve1D_DGAdvective_Line_Euler_Sod_toy.cpp
edit test/sandbox/Solve1D_DGAdvective_Line_Euler_Sod_ST_toy.cpp
edit test/sandbox/Adapt3D_Galerkin_Stabilized_AD_TripleBoundaryLayer_toy.cpp
edit test/sandbox/Solve2D_DGBR2_Triangle_NavierStokes_Joukowski_toy.cpp
edit test/sandbox/Adapt2D_Galerkin_Stabilized_AD_DoubleBoundaryLayer_toy.cpp
edit test/sandbox/Solve3D_DGBR2_Tet_NS_2_Cylinder_toy.cpp
edit test/sandbox/Solve2D_DGAdvective_Triangle_Euler_CubicSource_toy.cpp
edit test/sandbox/Adapt3D_DGBR2_AD_HemisphereCylinder_toy.cpp
edit test/sandbox/Solve2D_Coupled4x4_IBL_fx67k170_toy.cpp
edit test/sandbox/Solve2D_DGBR2_Triangle_AD_LocalRefine_toy.cpp
edit test/sandbox/Solve2D_DGAdvective_AD_RK_toy.cpp
edit test/sandbox/Solve3D_CG_LIP_KuttaHACK_toy.cpp
edit test/sandbox/Solve3D_VMSDBR2_RANSSA_HemisphereCylinder_toy.cpp
edit test/sandbox/Adapt3D_DGBR2_NavierStokes_HemisphereCylinder_toy.cpp
edit test/sandbox/Solve1D_DGAdvective_BuckleyLeverett_BDF_toy.cpp
edit test/sandbox/ErrorOrder_1D_Galerkin_Stabilized_AD_DoubleBL_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_NavierStokes_Joukowski_toy.cpp
edit test/sandbox/Solve1D_HDG_AD_HB_toy_LGOFF.cpp
edit test/sandbox/Solve2D_DGBR2_Circle_Line_ShallowWater_toy.cpp
edit test/sandbox/Solve2D_DGBR2_Euler_Riemann_AV_RK_toy.cpp
edit test/sandbox/Solve3D_DGBR2_RANSSA_HemisphereCylinder_toy.cpp
edit test/sandbox/Adapt1D_DGAdvective_Line_Euler_GilesPierce_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_Triangle_RANSSA_Joukowski_Subsonic_ArtificialViscosity_toy.cpp
edit test/sandbox/Solve2D_HDG_Triangle_RANSSA_Joukowski_toy.cpp
edit test/sandbox/annulus_meshing_UROP_toy.cpp
edit test/sandbox/Solve2D_CGStabilized_Triangle_RANSSA_Joukowski_ArtificialViscosity_toy.cpp
edit test/sandbox/Adapt3D_DGBR2_TwoPhase_ST_QuarterFiveSpot_toy.cpp
edit test/sandbox/Adapt2D_VMSD_Triangle_RANSSA_Joukowski_ArtificialViscosity_toy.cpp
edit test/sandbox/Adapt2D_CGStabilized_Triangle_RANSSA_Joukowski_Subsonic_ArtificialViscosity_toy.cpp
edit test/sandbox/Adapt2D_VMSD_RANSSA_MultiElementAirfoil_toy.cpp
edit test/sandbox/Adapt3D_VMSD_RANSSA_FlatPlate_toy.cpp
edit test/sandbox/Solve2D_CG_NACA_LIP_toy.cpp
edit test/sandbox/Adapt3D_DGBR2_TwoPhase_ArtificialViscosity_ST_QuarterFiveSpot_toy.cpp
edit src/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.h
edit test/sandbox/ErrorOrder_1D_DGBR2_NonLinPoisson_toy.cpp
edit test/sandbox/ErrorOrder_1D_Galerkin_Stabilized_AD_Oliver_toy.cpp
edit test/sandbox/Solve2D_DGBR2_TiltedFlat_Line_ShallowWater_toy.cpp
edit test/sandbox/Adapt4D_Galerkin_Stabilized_AD_ST_SquareChannel_toy.cpp
edit test/sandbox/Solve1D_CG_AD_RK_toy.cpp
edit test/sandbox/Solve2D_HDG_Triangle_AD_STtrick_toy_LGOFF.cpp
edit test/sandbox/Solve3D_VMSD_AD_ST_toy.cpp
edit test/sandbox/Solve4D_VMSD_AD_ST_SquareChannel_toy.cpp
edit test/sandbox/Adapt2D_VMSDBR2_Euler_GaussianBump_Transformation_toy.cpp
edit test/sandbox/Solve2D_DGBR2_Quadrilateral_RANSSA_Joukowski_UROP_toy.cpp
edit test/sandbox/Adapt3D_DGBR2_RANSSA_CRM_Sub_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_Poisson_toy.cpp
edit test/sandbox/Solve2D_DGBR2_Triangle_NavierStokes_NACADuct_toy.cpp
edit test/sandbox/Adapt3D_DGBR2_NavierStokes_DeltaWing_toy.cpp
edit test/sandbox/ErrorOrder_1D_Galerkin_Stabilized_AD_toy.cpp
edit test/sandbox/Solve1D_CG_IncRANSSA1D_Channel_toy.cpp
edit test/sandbox/Adapt3D_DGBR2_NavierStokes_FlatPlate_toy.cpp
edit test/sandbox/Solve2D_DGAdvective_AD_RK_ParallelPeriodic_toy.cpp
edit test/sandbox/Adapt3D_L2Project_MOESS_toy.cpp
edit test/sandbox/Adjoint1D_DGAdvective_AD_ST_toy.cpp
edit test/sandbox/Solve2D_DGBR2_Triangle_Euler_GaussianBump_ArtificialViscosity_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_Euler_ArtificialViscosity_ST_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_Triangle_RANSSA_Joukowski_Subsonic_toy.cpp
edit test/sandbox/Adapt3D_DGBR2_RANSSA_CRM_toy.cpp
edit test/sandbox/Solve1D_DGBR2_BuckleyLeverett_ArtificialViscosity_ST_toy.cpp
edit test/sandbox/Adapt3D_DGBR2_NavierStokes_HCH_toy.cpp
edit test/sandbox/Solve1D_DGAdvective_Line_Euler_SSMENozzle_toy.cpp
edit test/sandbox/Adapt3D_DGBR2_AD_ST_toy.cpp
edit test/sandbox/Adapt2D_CGStabilized_Triangle_RANSSA_Joukowski_Transonic_ArtificialViscosity_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_NavierStokes_ParkMMS_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_NavierStokes_BackwardsStep_toy.cpp
edit test/sandbox/Adjoint1D_DGAdvective_BuckleyLeverett_ST_toy.cpp
edit test/sandbox/Solve2D_Coupled4x4_IBL_fx67k170_drag_polar_toy.cpp
edit test/sandbox/Solve2D_DGAdvective_TiltedFlat_Line_ShallowWater_toy.cpp
edit test/sandbox/Solve4D_Galerkin_Stabilized_AD_ST_toy.cpp
edit test/sandbox/Adapt2D_VMSD_RANSSA_MultiElementAirfoil_Q1_refine_toy.cpp
edit test/sandbox/Solve2D_VMSDBR2_HOW5_VI2_Surface_AV_HTC_toy.cpp
edit test/sandbox/Adapt3D_DGBR2_TwoPhase_ArtificialViscosity_ST_SPE10_Param_toy.cpp
edit test/sandbox/Adapt3D_VMSD_NavierStokes_DeltaWing_toy.cpp
edit test/sandbox/Solve2D_DGAdvective_HOW5_CI1_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_RANSSA_FlatPlate_toy.cpp
edit test/sandbox/Adapt2D_VMSD_AD_ST_toy.cpp
edit test/sandbox/Solve4D_DGBR2_AD_ST_toy.cpp
edit test/sandbox/ErrorOrder_1D_VMSD_AD_toy.cpp
edit test/sandbox/Solve2D_HDG_Triangle_Euler_CubicSource_toy.cpp
edit test/sandbox/Adapt2D_VMSDBR2_RANSSA_Joukowski_toy.cpp
edit test/sandbox/Solve1D_HDG_Burgers_PS_toy_LGOFF.cpp
edit test/sandbox/Adapt3D_DGBR2_NavierStokes_DeltaWing_FixDOF_toy.cpp
edit test/sandbox/Solve2D_CGStabilized_Triangle_Euler_GaussianBump_ArtificialViscosity_toy.cpp
edit test/sandbox/Adapt4D_DGBR2_AD_ST_toy.cpp
edit test/sandbox/Solve2D_DGBR2_Triangle_RANSSA_FlatPlate_toy.cpp
edit test/sandbox/Solve2D_VMSDBR2_RANSSA_Joukowski_HTC_toy.cpp
edit test/sandbox/Solve2D_VMSD_Triangle_NavierStokes_Joukowski_ArtificialViscosity_toy.cpp
edit test/sandbox/Adapt3D_VMSDBR2_NavierStokes_DeltaWing_Chain_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_Triangle_RANSSA_NACA0012_ArtificialViscosity_toy.cpp
edit test/sandbox/Solve3D_DGBR2_Hex_ADPeriodic_RK_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_AR_toy.cpp
edit test/sandbox/Adapt2D_Galerkin_Stabilized_NavierStokes_FlatPlate_toy.cpp
edit test/sandbox/Solve3D_DGBR2_xtNonLinPoisson_RK_toy.cpp
edit test/sandbox/Solve1D_DGBR2_Line_Euler_Nozzle_ArtificialViscosity_toy.cpp
edit test/sandbox/Adapt2D_Galerkin_Stabilized_RANSSA_Joukowski_toy.cpp
edit test/sandbox/Adapt2D_HDG_NavierStokes_FlatPlate_toy.cpp
edit test/sandbox/Quadrature_Testing_toy.cpp
edit test/sandbox/Solve3D_CGStabilized_RANSSA_OneraM6_Subsonic_toy.cpp
edit test/sandbox/Solve3D_DGBR2_AD_ST_toy.cpp
edit test/sandbox/Solve2D_HDG_Triangle_NavierStokes_FlatPlate_toy.cpp
edit test/sandbox/Solve3D_CGStabilized_RANSSA_OneraM6_Subsonic_ArtificialViscosity_toy.cpp
edit test/sandbox/Adapt2D_VMSD_RANSSA_RAE2822_toy.cpp
edit test/sandbox/Solve3D_CGStabilized_RANSSA_HemisphereCylinder_toy.cpp
edit test/sandbox/Adapt3D_Galerkin_Stabilized_NavierStokes_FlatPlate_toy.cpp
edit test/sandbox/Solve2D_VMSD_HOW5_VI2_AV_toy.cpp
edit test/sandbox/Solve1D_VMSDBR2_Burgers_toy.cpp
edit test/sandbox/Solve2D_CGStabilized_Triangle_NavierStokes_FlatPlate_toy.cpp
edit test/sandbox/Solve2D_CG_Plate_HSM_toy.cpp
edit test/sandbox/Adapt3D_VMSD_RANSSA_CornerFlatPlate_toy.cpp
edit test/sandbox/Solve2D_DGBR2_AD_ST_toy.cpp
edit test/sandbox/Adapt1D_Galerkin_Stabilized_AR_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_RANSSA_Nakayama_toy.cpp
edit test/sandbox/Solve2D_CG_Triangle_LIP_CubicSource_toy.cpp
edit test/sandbox/Solve2D_CG_NACABTE_IPTF_toy.cpp
edit test/sandbox/Solve3D_VMSD_NavierStokes_OjedaMMS_toy.cpp
edit test/sandbox/Solve2D_Galerkin_Stabilized_AD_ST_toy.cpp
edit test/sandbox/Solve2D_CGStabilized_Triangle_RANSSA_Joukowski_toy.cpp
edit test/sandbox/Solve3D_Coupled3x3_IBL_FlatPlate_torpedo_toy.cpp
edit test/sandbox/Adapt2D_CGStabilized_Triangle_RANSSA_Joukowski_Subsonic_toy.cpp
edit test/sandbox/Solve4D_DGBR2_AD_ST_SquareChannel_toy.cpp
edit test/sandbox/Adapt2D_Galerkin_Stabilized_AR_toy.cpp
edit test/sandbox/Solve2D_DGBR2_Triangle_RANSSA_OjedaMMS_toy.cpp
edit test/sandbox/Solve2D_VMSD_Triangle_NavierStokes_OjedaMMS_toy.cpp
edit test/sandbox/Solve1D_DGBR2_Line_Euler_ShuOsher_AV_ST_toy.cpp
edit test/sandbox/Solve2D_CG_NACA_IPTF_toy.cpp
edit test/sandbox/Solve2D_CG_NACA_IPTF_linearsolve_toy.cpp
edit test/sandbox/Solve2D_DGBR2_Triangle_NavierStokes_OjedaMMS_toy.cpp
edit test/sandbox/Solve1D_HDG_Burgers_PTC_toy_LGOFF.cpp
edit test/sandbox/Solve3D_DGBR2_NavierStokes_OjedaMMS_toy.cpp
edit test/sandbox/Solve2D_CGStabilized_Triangle_RANSSA_Joukowski_BLSC_toy.cpp
edit test/sandbox/Solve2D_DGBR2_Triangle_RANSSA_Joukowski_toy.cpp
edit test/sandbox/Adapt2D_CGStabilized_HOW5_CI1_ArtificialViscosity_toy.cpp
edit test/sandbox/Adapt3D_DGBR2_AD_TripleBoundaryLayer_toy.cpp
edit test/sandbox/Solve1D_DGBR2_Line_Euler_ArtNozzle_AV_BDF_toy.cpp
edit test/sandbox/Solve3D_DGBR2_NavierStokes_DeltaWing_toy.cpp
edit test/sandbox/Solve2D_VMSDBR2_Triangle_RANSSA_Joukowski_toy.cpp
edit test/sandbox/Solve3D_CGStabilized_RANSSA_OneraM6_ArtificialViscosity_toy.cpp
edit test/sandbox/Solve3D_Uncoupled_IBLFourEqn_FlatPlate_StagnationRadial_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_NavierStokes_FlatPlate_LikelihoodSweep_toy.cpp
edit test/sandbox/Adapt3D_DGBR2_TwoPhase_ArtificialViscosity_ST_internalface2D_toy.cpp
edit test/sandbox/Adapt2D_VMSD_RANSSA_Joukowski_toy.cpp
edit test/sandbox/Solve3D_CGStabilized_Euler_Bump_ArtificialViscosity_toy.cpp
edit test/sandbox/Solve2D_VMSD_HOW5_CI1_toy.cpp
edit test/sandbox/Solve1D_CG_Line_Euler_Sod_toy.cpp
edit test/sandbox/Adapt2D_Galerkin_Stabilized_NavierStokes_Joukowski_toy.cpp
edit test/sandbox/Solve1D_HDG_Burgers_DBC_toy_LGOFF.cpp
edit test/sandbox/Adapt3D_CG_TwoPhase_ST_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_NavierStokes_FlatPlate_MCMC_toy.cpp
edit test/sandbox/Adapt3D_Galerkin_Stabilized_AD_TripleBoundaryLayer_MultiScale_toy.cpp
edit test/sandbox/Solve2D_DGAdvective_Triangle_Euler_Entropy_CubicSource_toy.cpp
edit test/sandbox/Solve3D_CG_NACA_LIP_toy.cpp
edit test/sandbox/Solve2D_CG_AD_ArtificialViscosity_toy.cpp
edit test/sandbox/Solve2D_DGBR2_Triangle_Euler_Ramp_ArtificialViscosity_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_HOW5_CI1_toy.cpp
edit test/sandbox/Adapt2D_Mesh_Optimizer_toy.cpp
edit test/sandbox/Adapt4D_Galerkin_Stabilized_AD_ST_toy.cpp
edit test/sandbox/Solve2D_VMSD_Triangle_NavierStokes_Joukowski_toy.cpp
edit test/sandbox/Solve3D_CG_xNonLinPoisson_toy.cpp
edit test/sandbox/Adapt3D_DGBR2_TwoPhase_ST_toy.cpp
edit test/sandbox/ErrorOrder_2D_VMSDBR2_Triangle_AD_toy.cpp
edit test/sandbox/Solve2D_VMSD_HOW5_VI2_toy.cpp
edit test/sandbox/Solve2D_CGStabilized_Triangle_NavierStokes_GaussianBump_ArtificialViscosity_toy.cpp
edit test/sandbox/Solve4D_VMSD_AD_ST_toy.cpp
edit test/sandbox/Solve2D_DGAdvective_Euler_Joukowski_toy.cpp
edit test/sandbox/Adapt4D_VMSD_AD_ST_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_Euler_GilesPierce_AV_toy.cpp
edit test/sandbox/Adapt2D_Galerkin_Stabilized_Euler_CubicSource_toy.cpp
edit test/sandbox/Solve2D_DGAdvective_Triangle_Euler_GaussianBump_toy.cpp
edit test/sandbox/Solve2D_DGBR2_Triangle_Poisson_toy.cpp
edit test/sandbox/Adapt2D_CGStabilized_Triangle_RANSSA_Joukowski_ArtificialViscosity_toy.cpp
edit test/sandbox/Adapt2D_L2Project_MOESS_toy.cpp
edit test/sandbox/Solve3D_CG_NACA_LIP_Drela_toy.cpp
edit test/sandbox/Adapt3D_DGBR2_RANSSA_FlatPlate_toy.cpp
edit test/sandbox/Solve2D_CGStabilized_Triangle_NavierStokes_Joukowski_ArtificialViscosity_toy.cpp
edit test/sandbox/Adapt4D_VMSD_AD_ST_SquareChannel_toy.cpp
edit test/sandbox/Solve3D_CG_NACA_FP_Virtual_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_Triangle_RANSSA_RAE2822_ArtificialViscosity_toy.cpp
edit test/sandbox/Adapt3D_DGBR2_NavierStokes_DeltaWing_Chain_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_Euler_ArtNozzle_AV_ST_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_L2_ASExp_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_BuckleyLeverett_ST_toy.cpp
edit test/sandbox/Adapt2D_DGAdvective_Euler_Joukowski_Pointwise_toy.cpp
edit test/sandbox/Adapt4D_VMSD_AD_ST_ExpandingSphericalWave_toy.cpp
edit test/sandbox/Solve2D_DGAdvective_Line_Euler_Sod_ST_toy.cpp
edit test/sandbox/Solve3D_CGStabilized_RANSSA_CRM_Sub_toy.cpp
edit test/sandbox/Solve2D_DGBR2_Triangle_NavierStokes_SpaceTime_Ellipse_toy.cpp
edit test/sandbox/Solve2D_VMSDBR2_HOW5_VI2_toy.cpp
edit test/sandbox/Adapt2D_VMSDBR2_Euler_Ringleb_toy.cpp
edit test/sandbox/Solve1D_DGAdvective_AD_ST_toy.cpp
edit test/sandbox/Adapt2D_Galerkin_Stabilized_Poisson_toy.cpp
edit test/sandbox/Adapt3D_DGBR2_TwoPhase_ST_internalface2D_toy.cpp
edit test/sandbox/Solve2D_DGBR2_Triangle_Euler_NACA0012_ArtificialViscosity_toy.cpp
edit test/sandbox/ErrorOrder_2D_VMSD_Triangle_AD_toy.cpp
edit test/sandbox/Adapt3D_VMSD_AD_TripleBoundaryLayer_toy.cpp
edit test/sandbox/Adapt2D_VMSDBR2_NavierStokes_LaminarJoukowski_AV_HTC_P1_2k_toy.cpp
edit test/sandbox/Solve2D_CG_Eikonal_Distance_toy.cpp
edit test/sandbox/Adapt3D_DGBR2_Burgers_ArtificialViscosity_ST_toy.cpp
edit test/sandbox/Adapt3D_VMSD_NavierStokes_DeltaWing_FixDOF_toy.cpp
edit test/sandbox/Solve2D_CG_Triangle_Poisson_toy.cpp
edit test/sandbox/Adapt1D_L2Project_MOESS_toy.cpp
edit test/sandbox/Solve2D_DGAdvective_AdvectionOnly_Circle_toy.cpp
edit test/sandbox/Solve3D_VMSDBR2_RANSSA_OjedaMMS_toy.cpp
edit test/sandbox/Solve3D_VMSD_RANSSA_OjedaMMS_toy.cpp
edit test/sandbox/Adapt3D_VMSD_AD_ST_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_AD_DoubleBoundaryLayer_toy.cpp
edit test/sandbox/Solve2D_DGBR2_LinearRobin_mitLG_sansLG_Consistency_AD_toy.cpp
edit test/sandbox/Solve3D_CG_NACA_FP_MD_toy.cpp
edit test/sandbox/Solve3D_Galerkin_Stabilized_NavierStokes_OjedaMMS_toy.cpp
edit test/sandbox/Solve1D_Lorenz_toy.cpp
edit test/sandbox/Solve2D_DGBR2_Triangle_P_Poisson_Distance_toy.cpp
edit test/sandbox/Adapt3D_DGBR2_RANSSA_ArtificialViscosity_ONERA_M6_toy.cpp
edit test/sandbox/Solve3D_Galerkin_Stabilized_RANSSA_OjedaMMS_toy.cpp
edit test/sandbox/Adapt2D_HDG_AD_DoubleBoundaryLayer_toy.cpp
edit test/sandbox/Solve1D_DGBR2_Burgers_ArtificialViscosity_toy.cpp
edit test/sandbox/Solve2D_CGStabilized_Triangle_NavierStokes_OjedaMMS_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_Burgers_ArtificialViscosity_ST_toy.cpp
edit test/sandbox/Adapt2D_HDG_BuckleyLeverett_ST_toy.cpp
edit test/sandbox/Solve3D_CG_NACA_LIP2_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_L2_CornerSingularity_toy.cpp
edit test/sandbox/Solve3D_Coupled3x3_IBL_FlatPlate_RadialStagnationFlow_toy.cpp
edit test/sandbox/Adapt3D_DGBR2_TwoPhase_ArtificialViscosity_ST_SPE10_Lookup_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_TwoPhase_ArtificialViscosity_ST_toy.cpp
edit test/sandbox/Solve1D_DGBR2_Line_Euler_Lax_AV_ST_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_Burgers_ST_toy.cpp
edit test/sandbox/Solve4D_Galerkin_Stabilized_AD_ST_SquareChannel_toy.cpp
edit test/sandbox/Solve2D_DGBR2_Quad_Euler_ForwardFacingStep_AV_BDF_toy.cpp
edit test/sandbox/Solve1D_DGAdvective_Line_Euler_Pulse_toy.cpp
edit test/sandbox/Solve1D_HDG_Burgers_toy_LGOFF.cpp
edit test/sandbox/Solve3D_DGBR2_RANSSA_CRM_Sub_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_BuckleyLeverett_ArtificialViscosity_ST_Block2x2_toy.cpp
edit test/sandbox/Adapt4D_DGBR2_AD_ST_SquareChannel_toy.cpp
edit test/sandbox/Adapt3D_VMSDBR2_RANSSA_HemisphereCylinder_toy.cpp
edit test/sandbox/Adapt3D_VMSDBR2_TwoPhase_ST_toy.cpp
edit test/sandbox/Solve1D_DGAdvective_AR_toy.cpp
edit test/sandbox/Solve1D_HDG_AD_ST_toy_LGOFF.cpp
edit test/sandbox/Adapt4D_Mesh_Optimizer_toy.cpp
edit test/sandbox/Adapt3D_VMSDBR2_RANSSA_DPW_AV_HTC_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_Triangle_RANSSA_Joukowski_ArtificialViscosity_toy.cpp
edit test/sandbox/Solve2D_CG_Quad_AD_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_AD_ArtificialViscosity_toy.cpp
edit test/sandbox/Solve3D_CG_NACA_LIP_Darmofal_toy.cpp
edit test/sandbox/Adapt2D_VMSDBR2_NavierStokes_LaminarJoukowski_AV_HTC_toy.cpp
edit test/sandbox/Solve3D_CG_NACA_FP_Drela_toy.cpp
edit test/sandbox/Optimize_Blade_HSM2D_toy.cpp
edit test/sandbox/Solve3D_DGBR2_RANSSA_CRM_toy.cpp
edit test/sandbox/Solve2D_CGStabilized_HOW5_CI1_toy.cpp
edit test/sandbox/Solve1D_DGBR2_Line_Euler_ArtNozzle_AV_Steady_toy.cpp
edit test/sandbox/Solve2D_CG_Line_Euler_Sod_ST_toy.cpp
edit test/sandbox/Solve3D_VMSDBR2_BlottnerSphere_AV_HTC_toy.cpp
edit test/sandbox/Adapt3D_DGBR2_RANSSA_CornerFlatPlate_toy.cpp
edit test/sandbox/Solve2D_FV_TwoPhase_SPE10_BDF_toy.cpp
edit test/sandbox/Adapt2D_VMSD_RANSSA_AV_MultiElementAirfoil_toy.cpp
edit test/sandbox/Solve2D_DGAdvective_Triangle_Euler_Wake_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_AD_PrimalOnlyBoundaryLayer_toy.cpp
edit test/sandbox/Solve2D_DGBR2_TwoPhase_ArtificialViscosity_QuarterFiveSpot_BDF_toy.cpp
edit test/sandbox/Solve2D_DGBR2_Ellipse_Line_ShallowWater_toy.cpp
edit test/sandbox/Adapt4D_L2Project_toy.cpp
edit test/sandbox/ErrorOrder_2D_Galerkin_Stabilized_Triangle_AD_toy.cpp
edit test/sandbox/Adapt1D_DGBR2_Line_Euler_SSMENozzle_toy.cpp
edit test/sandbox/Adapt1D_DGBR2_MMS_toy.cpp
edit test/sandbox/Adapt3D_Galerkin_Stabilized_AD_ST_toy.cpp
edit test/sandbox/Solve1D_DGBR2_Line_Euler_Sod_AV_ST_toy.cpp
edit test/sandbox/Solve1D_DGBR2_Burgers_toy.cpp
edit test/sandbox/Adapt2D_Galerkin_Stabilized_AD_Pollutant_toy.cpp
edit test/sandbox/Solve2D_HDG_Triangle_NavierStokes_OjedaMMS_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_NavierStokes_NACADuct_toy.cpp
edit test/sandbox/Adapt3D_DGAdvective_Euler_HCH_toy.cpp
edit test/sandbox/Solve2D_DGBR2_HOW5_CI1_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_Helmholtz_toy.cpp
edit test/sandbox/Adapt3D_CGStabilized_RANSSA_ArtificialViscosity_ONERA_M6_toy.cpp
edit test/sandbox/Solve3D_DGBR2_xtNonLinAdvDiff_RK_toy.cpp
edit test/sandbox/Adapt2D_Galerkin_Stabilized_NavierStokes_BackwardsStep_toy.cpp
edit test/sandbox/Solve3D_DGBR2_Hex_TaylorGreen_toy.cpp
edit test/sandbox/Solve2D_CGStabilized_Triangle_Euler_GaussianBump_toy.cpp
edit test/sandbox/Adapt1D_Galerkin_Stabilized_AD_BoundaryLayer_toy.cpp
edit test/sandbox/Solve3D_DGAdvective_Euler_Suboff_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_RANSSA_Joukowski_toy.cpp
edit test/sandbox/Solve2D_HDG_Triangle_NavierStokes_Joukowski_toy.cpp
edit test/sandbox/Solve2D_DGBR2_Eikonal_Distance_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_AD_ST_toy.cpp
edit test/sandbox/Solve2D_FV_TwoPhase_QuarterFiveSpot_BDF_toy.cpp
edit test/sandbox/Adapt3D_DGBR2_RANSSA_HemisphereCylinder_toy.cpp
edit test/sandbox/Solve3D_Uncoupled_IBL_FlatPlate_Blasius_toy.cpp
edit test/sandbox/Solve1D_DGBR2_Line_Euler_ArtNozzle_AV_ST_toy.cpp
edit test/sandbox/Solve2D_EDG_Triangle_Stokes_OjedaMMS_toy.cpp
edit test/sandbox/Solve2D_DGAdvective_Triangle_Euler_Vortex_toy.cpp
edit test/sandbox/Solve4D_L2Project_toy.cpp
edit test/sandbox/Solve3D_Galerkin_Stabilized_RANSSA_HemisphereCylinder_toy.cpp
edit CMakeLists.txt
edit test/sandbox/Solve2D_DGAdvective_Triangle_Euler_SmoothBump_toy.cpp
edit test/sandbox/Solve2D_DGBR2_TwoPhase_QuarterFiveSpot_BDF_toy.cpp
edit test/sandbox/Solve2D_DGBR2_Triangle_RANSSA_Joukowski_ArtificialViscosity_toy.cpp
edit test/sandbox/Adapt3D_L2Project_MultiScale_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_TwoPhase_ST_Symmetric_toy.cpp
edit test/sandbox/Solve2D_VMSDBR2_HOW5_VI2_AV_HTC_toy.cpp
edit test/sandbox/Adapt2D_DGAdvective_Euler_CubicSource_toy.cpp
edit test/sandbox/Solve1D_DGBR2_BuckleyLeverett_ArtificialViscosity_BDF_toy.cpp
edit test/sandbox/Solve2D_DGAdvective_Triangle_Euler_Taylor_Green_toy.cpp
edit test/sandbox/Solve1D_EDG_Line_Euler_Sod_ST_toy.cpp
edit test/sandbox/Solve3D_Uncoupled_IBLFourEqn_FlatPlate_Blasius_toy.cpp
edit test/sandbox/Solve2D_HDG_Line_Euler_Sod_ST_toy.cpp

Explicitly only use one OpenMP thread for PETSc with MPI

by galbramc

edit test/PETSc_fixture.cpp
edit CMakeInclude/Builds/BuildPETSC.cmake

mat-mul needed for sans-Lagrange no-slip BCs for NS

by allmaras

edit src/LinearAlgebra/DenseLinAlg/StaticSize/MatMul/MatrixS_MatMul_Native_Surreal_Instantiate.cpp

minor refactoring

by shunz

edit src/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PiecewiseConstSourcePanel_FlatPlate3D.h

added IO files for sans-Lagrange no-slip BCs for NS

by allmaras

add test/unit/IO/pde/NS/BCNavierStokes2D_Robin_sansLG_pattern.txt
add test/unit/IO/pde/NS/BCNavierStokes3D_Robin_sansLG_pattern.txt

playing with laminar and turbulent cases for LIP+IBL3

by shunz

edit test/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cpp

minor cleanup

by shunz

edit test/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cpp

Turned off full jacobian ping test for 3-eq IBL Quad. , Also some minor clean.

by shunz

edit test/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Triangle_btest.cpp
edit test/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cpp
edit test/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cpp

Correction to last commit message: should be ",Turned ON full test",

by shunz

edit test/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cpp

changes to HDG FieldWeighted integral for sans-Lagrange no-slip BCs for NS, note

by allmaras

edit src/Discretization/HDG/AlgebraicEquationSet_HDG.h
edit src/Discretization/HDG/IntegrandBoundaryTrace_Robin_sansLG_HDG.h

Added deltaRef for body force viscous terms

by galbramc

add src/Field/NormalField/DeltaRef/ProjectDeltaRef_KDVertex.h
edit src/Meshing/EGADS/RotorSource/Rotor.cpp
edit src/Field/FieldVolume_CG_Cell_Instantiate_3D.cpp
edit src/Field/FieldVolume_Instantiate_3D.cpp
add src/Field/NormalField/DeltaRef/DeltaRefEmpty.h
edit src/pde/NS/BCEulermitAVSensor3D.h
edit src/Field/CMakeLists.txt
add src/Field/NormalField/DeltaRef/DeltaRefTable.cpp
add src/Field/output_Tecplot/output_Tecplot_SA_VMSDBR2.cpp
edit test/unit/pde/NS/PDEEulermitAVDiffusion3D_RotorSource_btest.cpp
edit src/Field/FieldBaseVolume_Instantiate.cpp
edit CMakeInclude/Builds/BuildPETSC.cmake
edit src/UserInterfaces/BodyForceSolver_impl.h
add src/Field/NormalField/DeltaRef/DeltaRefStorage.cpp
add src/Field/NormalField/DeltaRef/ProjectDeltaRef.cpp
edit src/LinearAlgebra/DenseLinAlg/DynamicSize/MatMul/MatMul_Native_Real.cpp
edit src/UserInterfaces/BodyForceSolver.h
add src/Field/NormalField/DeltaRef/DeltaRefStorage.h
edit src/Meshing/EGADS/RotorSource/Rotor.h
add src/Field/NormalField/DeltaRef/ProjectDeltaRef.h
edit src/Field/NormalField/NormalField.h
edit src/BasisFunction/BasisFunctionArea_Projection.cpp
edit src/Field/FieldVolume_DG_Cell_Instantiate_3D.cpp
edit src/Field/NormalField/NormalField_Volume.cpp
add src/Field/NormalField/DeltaRef/DeltaRefTable.h
edit src/UserInterfaces/PythonUI/PySANS_BodyForce.cpp
edit test/unit/Field/NormalField_btest.cpp
edit test/PETSc_fixture.cpp
edit src/pde/NS/PDEEuler3D_RotorSource.h
edit src/BasisFunction/BasisFunctionVolume_Projection.cpp
edit src/Field/output_Tecplot/output_Tecplot_FieldVolume.cpp
edit test/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cpp

some cleanup on panel-IBL3 sandbox case

by shunz

edit src/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PiecewiseConstSourcePanel_FlatPlate3D.h
edit test/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cpp

Add missing includes

by galbramc

edit src/Field/NormalField/DeltaRef/DeltaRefTable.h
edit src/Field/NormalField/DeltaRef/DeltaRefStorage.cpp

Forgot a file

by galbramc

edit src/LinearAlgebra/DenseLinAlg/DynamicSize/MatrixD_InverseLU_Real_Instantiate.cpp

Separate constant and quadratic body force viscous terms

by galbramc

edit test/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cpp
edit src/pde/NS/PDEEuler3D_RotorSource.h

fixed compile error and warning

by shunz

edit test/sandbox/Solve3D_CG_FP_duct_toy.cpp
edit test/unit/UnitGrids/XField3D_BoxBoundaries_Quad_X1.h

Turned on full jacobian ping test for coupled panel+IBL3 (3-eq)

by shunz

edit test/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cpp
edit test/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Triangle_btest.cpp

Turned on more jacobian ping test

by shunz

edit test/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cpp

Fix link error

by galbramc

edit src/Field/FieldVolume_CG_Cell_Instantiate_3D.cpp
edit test/unit/Field/Field3D_CG_Tetrahedron_btest.cpp

Fix Newton iteration separator

by galbramc

edit src/NonLinearSolver/NewtonSolver_impl.h

Update unit test

by galbramc

edit test/unit/pde/NS/PDEEuler3D_RotorSource_btest.cpp
edit src/pde/NS/PDEEuler3D_RotorSource.h

refactored panel-IBL3 case running setup

by shunz

edit test/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cpp

Output IBL results of mass defect flux in lieu of dummy output of qz_X

by shunz

edit src/pde/IBL/ElementProjectionOutputIBL3D.h

bug fix: consistent definition of w and b fields in FieldWeighted

by allmaras

edit src/Discretization/HDG/IntegrandBoundaryTrace_Robin_sansLG_HDG.h

Refactored sandbox case setup: panel-IBL3, LIP-IBL3

by shunz

edit test/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cpp
edit test/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cpp
edit test/sandbox/Solve3D_Coupled_LIP_IBL3_duct_ring_toy.cpp

Forgot to suppress one output

by galbramc

edit test/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cpp

Return results from Constrained body force solver

by galbramc

edit src/UserInterfaces/BodyForceSolver_impl.h

fix style

by shunz

edit test/unit/UnitGrids/XField3D_Box_Hex_X1.cpp

refactor and unit test Auxv equation for 3D flate plate panel

by shunz

add test/unit/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PiecewiseConstSourcePanel_FlatPlate3D_Triangle_btest.cpp
edit test/unit/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_3D_btest.cpp
edit src/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PiecewiseConstSourcePanel_FlatPlate3D.h
edit src/Discretization/Galerkin/IntegrandCell_ProjectFunction.h
add test/unit/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PiecewiseConstSourcePanel_FlatPlate3D_Quad_btest.cpp

minor cleanup

by shunz

edit test/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cpp

Refactor Auxv equation of 3D flat plate panel method to allow for CG p1 qauxvfld for better DOF efficiency

by shunz

edit test/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Triangle_btest.cpp
edit test/unit/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PiecewiseConstSourcePanel_FlatPlate3D_Quad_btest.cpp
edit test/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cpp
edit src/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PiecewiseConstSourcePanel_FlatPlate3D.h
edit test/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cpp
edit test/unit/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PiecewiseConstSourcePanel_FlatPlate3D_Triangle_btest.cpp
edit test/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cpp
edit src/PanelMethod/FunctionEvalQauxv_IBL_PiecewiseConstSourcePanel_FlatPlate3D.h
edit src/PanelMethod/PiecewiseConstSourcePanel_FlatPlate3D.h

Fix bug in deltaRef reduction process

by galbramc

edit src/Field/NormalField/DeltaRef/DeltaRefStorage.cpp

fix warning messages

by allmaras

edit test/unit/pde/OutputCell_SolutionErrorSquared_btest.cpp
edit src/Discretization/Potential_Adjoint/IntegrandBoundaryTrace_WakeCut_CG_FP_Virtual.h
edit test/sandbox/Adapt2D_DGAdvective_Euler_Joukowski_Pointwise_toy.cpp
edit test/unit/pde/OutputCell_SolutionErrorL2_btest.cpp

minor cleanup

by shunz

edit test/unit/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PiecewiseConstSourcePanel_FlatPlate3D_Quad_btest.cpp

bug fix: 3D panel method with triangle panels was computing panel area wrongly by double-multiplying reference area. , Added unit tests for this panel method

by shunz

edit src/PanelMethod/PiecewiseConstSourcePanel_FlatPlate3D.h
add test/unit/PanelMethod/PiecewiseConstSourcePanel_FlatPlate3D_btest.cpp

fix compile errors caused by typos and lag behind previous , refactoring

by shunz

edit test/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cpp
edit test/sandbox/Solve3D_Coupled_LIP_IBL3_duct_ring_toy.cpp
edit test/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cpp

fix style for Vera check

by shunz

edit test/unit/PanelMethod/PiecewiseConstSourcePanel_FlatPlate3D_btest.cpp

minor cleanup of sandbox case

by shunz

edit test/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cpp

more warning messages

by allmaras

edit src/Discretization/Potential_Adjoint/IntegrandBoundaryTrace_WakeCut_CG_FP_Virtual.h

fix warnings: comparing int and size_t in for loop

by shunz

edit test/sandbox/Solve3D_Coupled_LIP_IBL3_duct_ring_toy.cpp
edit test/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cpp

relaxed tolerance for intel

by shunz

edit test/unit/PanelMethod/PiecewiseConstSourcePanel_FlatPlate3D_btest.cpp
edit test/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cpp

fix duplicated BOOST test suite names

by shunz

edit test/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cpp
edit test/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cpp

Allow for no-wall distance functions

by galbramc

edit src/Field/DistanceFunction/DistanceFunction.cpp

Support 3D Q2 meshes with libMeshb

by galbramc

edit external/libMeshb/libMeshb7/libmeshb7.c
edit src/Meshing/libMeshb/CMakeLists.txt
edit src/Meshing/libMeshb/XFieldVolume_libMeshb.cpp
edit test/unit/Meshing/libMeshb/XField_libMeshb_btest.cpp
edit external/libMeshb/libMeshb7/libmeshb7.h
edit external/libMeshb/libMeshb7/libmeshb7.ins
add src/Meshing/libMeshb/libMeshbToSANS.cpp
edit src/Meshing/libMeshb/WriteMesh_libMeshb.cpp
edit external/CMakeLists.txt
add src/Meshing/libMeshb/libMeshbToSANS.h

changed full upwind back to using momentum flux correction by default

by shunz

edit src/pde/IBL/PDEIBLFourEqn3D.h

Fix warning

by galbramc

edit src/Meshing/libMeshb/WriteMesh_libMeshb.cpp

further reconciling merged code (mostly Shun',s coupled FP/IBL code), ',unit_build', now succeeds

by allmaras

edit src/Field/FieldTypes.h
delete src/Field/FieldVolume_DG_BoundaryTrace_matchAreaCell_impl.h
edit src/Field/Element/ElementXField_LocalAxesManager.h
edit src/Field/Field_DG/CMakeLists.txt
edit src/pde/IBL/ResidualCell_ProjectToQauxv.h
edit src/Field/NormalField/DeltaRef/ProjectDeltaRef.cpp
edit src/pde/IBL/IntegrandCell_ProjectToQauxv3D.h
edit src/Discretization/Galerkin/IntegrandBoundaryTrace_None_Galerkin_manifold.h
edit test/unit/UnitGrids/XField3D_BoxBoundaries_Quad_X1.h
edit test/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cpp
edit src/Discretization/Galerkin/IntegrandInteriorTrace_Galerkin_manifold.h
edit src/Field/output_Tecplot/output_Tecplot_SA_VMSDBR2.cpp
edit src/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_BCDataField.h
edit test/unit/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_3D_btest.cpp
delete src/Field/FieldVolume_DG_BoundaryTrace_matchAreaCell.h
edit src/pde/IBL/IntegrandCell_ProjectToQauxi.h
edit test/unit/UnitGrids/XField3D_BoxBoundaries_Quad_X1.cpp
edit test/unit/UnitGrids/XField3D_BoxBoundaries_Quad_X1_btest.cpp
edit src/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_Galerkin_LIP_HACK.h
edit test/unit/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PiecewiseConstSourcePanel_FlatPlate3D_Quad_btest.cpp
edit src/pde/IBL/JacobianCellParam_ProjectToQauxv.h
delete test/unit/Field/Field_DG_BoundaryTrace_matchAreaCell_btest.cpp
edit test/unit/UnitGrids/XField3D_BoxBoundary_Quad_X1_btest.cpp
edit test/unit/UnitGrids/XField3D_BoxBoundary_Quad_X1.h
edit test/unit/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PiecewiseConstSourcePanel_FlatPlate3D_Triangle_btest.cpp
delete src/Field/FieldVolume_DG_BoundaryTrace_matchAreaCell_Instantiate_3D.cpp
edit test/unit/UnitGrids/XField3D_BoxBoundary_Quad_X1.cpp
edit src/Discretization/Galerkin/IntegrandBoundaryTrace_Flux_mitState_Galerkin_manifold.h

more reconcilliation of merge conflicts, etc

by allmaras

edit test/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cpp
edit CMakeLists.txt
edit test/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cpp
edit test/sandbox/Solve3D_CG_FP_duct_toy.cpp
edit test/sandbox/Solve3D_Coupled_LIP_IBL3_duct_ring_toy.cpp

More changes to get Nwave boom propagation working

by cwomack

edit src/ErrorEstimate/CMakeLists.txt
add src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_AdvectionDiffusion1D_ALBDUSUG.cpp
add src/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_AdvectionDiffusion1D_ALBDUSUG.cpp
edit src/Discretization/CMakeLists.txt
delete src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_AdvectionDiffusion1D_ALaxDUSU.cpp
edit src/pde/AdvectionDiffusion/BCAdvectionDiffusionType.h
edit src/pde/AnalyticFunction/ScalarFunction1D.h

Redid unit test for nwave

by cwomack

edit src/pde/AnalyticFunction/ScalarFunction1D.h
edit test/unit/pde/AnalyticFunction/ScalarFunction1D_btest.cpp

added Shun',s coupled LIP/IBL cases to skip list as they have undefined references on clang 3.8

by allmaras

edit CMakeLists.txt

moved files into Field_DG subdirectory

by allmaras

add test/unit/Field/Field_DG/Field_DG_BoundaryTrace_matchAreaCell_btest.cpp
add src/Field/Field_DG/FieldVolume_DG_BoundaryTrace_matchAreaCell_impl.h
add src/Field/Field_DG/FieldVolume_DG_BoundaryTrace_matchAreaCell.h
add src/Field/Field_DG/FieldVolume_DG_BoundaryTrace_matchAreaCell_Instantiate_3D.cpp

Use KSPGMRESModifiedGramSchmidtOrthogonalization which is slower but more stable

by galbramc

edit src/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_impl.h

Format fix

by galbramc

edit src/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_impl.h

Relax tolerance

by galbramc

edit test/unit/Field/Project_DG_to_CG_btest.cpp

fixed undefined symbol/linking errors. , static const member needs to be define in cpp, strictly speaking. , clang compiler was rigorous enough to catch this, although gnu lets it pass...

by shunz

edit src/Discretization/Galerkin/AlgebraicEquationSet_Project.h
edit src/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_PiecewiseConstSourcePanel_FlatPlate3D.h
edit src/Discretization/HDG/AlgebraicEquationSet_HDGAdvective.h
edit src/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_CutcellTransitionIBL.h
edit src/pde/IBL/PDEIBL3D.h
edit src/Discretization/DG/AlgebraicEquationSet_DGBR2.h
edit src/Discretization/DG/AlgebraicEquationSet_DGAdvective.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_BCDataField.h
edit src/pde/IBL/ProjectToQauxi3D.h
edit src/pde/IBL/AlgebraicEquationSet_ProjectToQauxi.h
edit src/pde/IBL/PDEIBLSplitAmpLag2D.cpp
edit src/Discretization/Galerkin/AlgebraicEquationSet_Galerkin.h
edit src/pde/IBL/PDEIBLFourEqn3D.h
edit src/pde/IBL/PDEIBL2D.h
edit src/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_3D.h
edit src/pde/IBL/ProjectToQauxi2D.h
edit src/pde/IBL/PDEIBLSplitAmpLag2D.h
edit src/pde/IBL/PDEIBLUniField.h
edit src/Discretization/DG/AlgebraicEquationSet_TransitionIBL.h

fixed compile warnings about comparing int and unsigned int

by shunz

edit src/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_CutcellTransitionIBL.h
edit src/Discretization/DG/AlgebraicEquationSet_DGAdvective_impl.h
edit src/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_impl.h
edit src/Discretization/DG/AlgebraicEquationSet_TransitionIBL.h

First attempt at extracting Profile Loss for body forces

by galbramc

edit src/Field/NormalField/DeltaRef/DeltaRefStorage.h
edit src/Field/CMakeLists.txt
edit src/UserInterfaces/PythonUI/PySANS_BodyForce.cpp
add src/Field/NormalField/ProfileLoss/ProfileLossStorage.h
add src/Field/NormalField/ProfileLoss/ProfileLossStorage.cpp
edit src/UserInterfaces/BodyForceSolver_impl.h
add src/Field/NormalField/ProfileLoss/ProfileLoss.h
edit src/Meshing/EGADS/RotorSource/Rotor.h
add src/UserInterfaces/BodyForceSolverParam.hxx
edit src/Field/NormalField/DeltaRef/ProjectDeltaRef.cpp
edit src/UserInterfaces/BodyForceSolver.h
edit src/Field/NormalField/DeltaRef/DeltaRefStorage.cpp
add src/Field/NormalField/ProfileLoss/ProfileLoss.cpp
edit src/Meshing/EGADS/RotorSource/Rotor.cpp

add unit tests for better coverage

by shunz

add test/unit/IO/pde/IBL/PDEIBLFourEqn3D_pattern.txt
edit test/unit/pde/IBL/PDEIBLFourEqn3D_btest.cpp

Forgot to update checkInputs

by galbramc

edit src/Meshing/EGADS/RotorSource/Rotor.cpp

More profile loss fixes

by galbramc

edit src/Field/NormalField/ProfileLoss/ProfileLossStorage.cpp
edit src/Field/NormalField/ProfileLoss/ProfileLoss.cpp

Use Yuankang Chen data fit value for body force delta**2 term

by galbramc

edit src/pde/NS/PDEEuler3D_RotorSource.h

Fixes for profile loss

by galbramc

edit src/Field/NormalField/ProfileLoss/ProfileLoss.cpp
edit test/unit/pde/NS/PDEEulermitAVDiffusion3D_RotorSource_btest.cpp
edit test/unit/pde/NS/PDEEuler3D_RotorSource_btest.cpp
edit src/UserInterfaces/BodyForceSolver_impl.h

Cppcheck suppressions and Profile loss computed at constant radius

by galbramc

edit scripts/cppcheck/suppressions.txt
edit src/Field/NormalField/ProfileLoss/ProfileLoss.cpp
edit src/Field/Partition/LagrangeElementGroup.cpp

One more try at profile loss

by galbramc

edit src/Field/NormalField/ProfileLoss/ProfileLoss.cpp

just renaming

by shunz

edit test/unit/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_3D_btest.cpp

Start removing perturbed stuff

by galbramc

edit src/Discretization/VMSDBR2/IntegrandBoundaryTrace_Flux_mitState_VMSD_BR2.h
edit src/Discretization/VMSDBR2/IntegrandBoundaryTrace_Dirichlet_sansLG_VMSD_BR2.h
edit src/Discretization/VMSDBR2/IntegrandTrace_VMSD_BR2.h
edit src/Discretization/VMSDBR2/IntegrandBoundaryTrace_LinearScalar_sansLG_VMSD_BR2.h
edit test/system/LocalSolve/Constrained_Solve_btest.cpp
edit src/Field/ProjectSoln/Project_DG_to_CG/Project_DG_to_CG_impl.h
edit src/Discretization/VMSDBR2/IntegrandBoundaryTrace_Dirichlet_mitLG_VMSD_BR2.h
edit src/Meshing/EGADS/solidBoolean.h
edit src/Discretization/VMSDBR2/IntegrandBoundaryTrace_LinearScalar_mitLG_VMSD_BR2.h
edit src/Discretization/Galerkin/IntegrandBoundaryTrace_Flux_mitState_Nitsche.h

cppcheck fix and suppression

by galbramc

edit scripts/cppcheck/suppressions.txt
edit src/Quadrature/Quadrature_Simplex_StroudConical.cpp

clang analyzer fixes

by galbramc

edit test/unit/UnitGrids/XField3D_BoxBoundaries_Quad_X1.cpp
edit test/unit/Optimization/Problems/Truss/JacobianConstraint_Truss_btest.cpp
edit test/unit/UnitGrids/XField4D_Box_Pentatope_X1.cpp
edit src/Meshing/avro/XField_avro_impl.h

Fix cppcheck suppression

by galbramc

edit src/Quadrature/Quadrature_Simplex_StroudConical.cpp

add derivative calculation for IBL3 laminar eigen-analysis

by shunz

edit src/pde/IBL/ElementProjectionOutputIBL3D.h

More cppcheck fixes

by galbramc

edit test/unit/Python/PyDict_btest.cpp
edit test/unit/LinearAlgebra/Heat1D_btest.h
edit test/unit/pde/FullPotential/PDEFullPotential3D_btest.cpp
edit src/Meshing/libMeshb/libMeshb_Interface.h

More body force output functionals

by galbramc

edit src/Field/NormalField/ProfileLoss/ProfileLoss.h
edit src/UserInterfaces/BodyForceSolver.h
edit src/pde/NS/PDEEuler3D_RotorSource.h
edit src/Field/NormalField/ProfileLoss/ProfileLoss.cpp
edit src/UserInterfaces/PythonUI/PySANS_BodyForce.cpp
edit src/Meshing/EGADS/RotorSource/Rotor.cpp
edit src/Meshing/EGADS/RotorSource/Rotor.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.h
edit src/UserInterfaces/BodyForceSolver_impl.h

switched to constant density gas model for IBL

by shunz

edit src/pde/IBL/PDEIBLFourEqn3D.h
edit test/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cpp
edit src/pde/IBL/FluidModels.h
edit test/unit/pde/IBL/PDEIBLFourEqn3D_btest.cpp
edit test/unit/pde/IBL/ProjectToQauxi3D_btest.cpp
edit src/pde/IBL/FluidModels.cpp
edit test/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cpp
edit test/unit/IO/pde/IBL/PDEIBLFourEqn3D_pattern.txt

Remove lienar VMSD and perturbed functions

by galbramc

edit test/sandbox/Adapt2D_VMSD_RANSSA_Joukowski_toy.cpp
edit test/unit/pde/NS/PDEEuler3D_RotorSource_btest.cpp
edit src/pde/NS/PDEEuler1D.h
edit src/pde/SourceOnly/PDESourceOnly3D.h
delete src/Discretization/VMSD/AlgebraicEquationSet_Local_VMSD_Linear.h
edit src/pde/AdvectionDiffusion/PDEAdvectionDiffusion1D.h
edit test/sandbox/Solve2D_VMSD_HOW5_CI1_toy.cpp
edit test/system/CodeConsistency/VMSDBR2_BubbleModes_btest.cpp
edit test/unit/Discretization/VMSD/IntegrandTrace_VMSD_NL_AD_btest.cpp
edit src/pde/NDConvert/PDENDConvertSpaceTime1D.h
edit src/SolutionTrek/Continuation/Homotopy/PDEHomotopy.h
edit test/sandbox/Adapt2D_VMSD_Triangle_RANSSA_Joukowski_ArtificialViscosity_toy.cpp
delete src/ErrorEstimate/VMSD/ErrorEstimate_VMSD_Linear.h
edit src/Discretization/VMSD/IntegrandBoundaryTrace_None_VMSD.h
edit src/Adaptation/MOESS/SolverInterface_VMSD_BR2.h
edit src/pde/NDConvert/PDENDConvertSpace3D.h
edit src/pde/Burgers/PDEBurgers1D.h
delete test/unit/Discretization/VMSD/IntegrandCell_VMSD_AD_btest.cpp
edit src/pde/IncompressibleNS/PDEIncompressibleRANSSA1DChannel.h
edit test/unit/ErrorEstimate/ErrorEstimateCell_VMSD_AD_btest.cpp
edit src/pde/AdvectionDiffusion/PDEAdvectionDiffusion3D.h
edit src/pde/NS/PDERANSSA3D.h
edit src/pde/TCNE/PDETCNEEuler1D.h
edit src/pde/NDConvert/PDENDConvertSpace2D.h
edit src/Discretization/VMSDBR2/IntegrandTrace_VMSD_BR2.h
edit src/Discretization/VMSD/AlgebraicEquationSet_VMSD.h
edit src/pde/NS/PDEEuler2D.h
edit src/pde/NS/PDERANSSA2D.h
edit test/sandbox/Solve2D_VMSD_HOW5_VI2_AV_toy.cpp
edit src/Adaptation/MOESS/SolverInterface_VMSD.h
edit src/Discretization/VMSD/IntegrandBoundaryTrace_Flux_mitState_VMSD.h
edit src/pde/ArtificialViscosity/AVSensor_ViscousFlux2D.h
edit src/pde/Lorenz/PDELorenz.h
edit src/Discretization/VMSDBR2/AlgebraicEquationSet_VMSD_BR2.h
edit src/Discretization/VMSD/IntegrandTrace_VMSD_NL.h
edit src/pde/SourceOnly/PDESourceOnly2D.h
edit src/Discretization/VMSD/IntegrandBoundaryTrace_LinearScalar_mitLG_VMSD.h
edit src/pde/NS/PDEEulermitAVDiffusion2D.h
edit src/ErrorEstimate/VMSD/ErrorEstimate_VMSD.h
edit src/pde/AdvectionDiffusion/PDEAdvectionDiffusion2D.h
edit src/pde/NS/PDENavierStokes3D.h
edit test/unit/pde/NS/PDERANSSA2D_btest.cpp
edit src/pde/NDConvert/PDENDConvertSpace1D.h
delete src/Discretization/VMSD/IntegrandCell_VMSD.h
edit test/unit/Discretization/VMSD/IntegrandCell_VMSD_NL_AD_btest.cpp
edit test/sandbox/Solve3D_VMSD_RANSSA_OjedaMMS_toy.cpp
delete test/unit/Discretization/VMSD/IntegrandTrace_VMSD_AD_btest.cpp
edit src/Discretization/VMSD/IntegrandBoundaryTrace_Dirichlet_sansLG_VMSD.h
edit src/pde/NDConvert/PDENDConvertSpaceTime2D.h
edit src/pde/ArtificialViscosity/PDEmitAVSensor2D.h
edit src/pde/NS/PDENavierStokes2D.h
edit src/pde/NS/PDEEuler3D.h
edit src/Discretization/VMSD/IntegrandBoundaryTrace_Dirichlet_mitLG_VMSD.h
delete src/Discretization/VMSD/IntegrandTrace_VMSD.h
edit test/sandbox/Solve2D_VMSD_HOW5_VI2_toy.cpp
edit test/unit/Discretization/VMSD/JacobianCell_VMSD_AD_btest.cpp
edit test/unit/Discretization/VMSD/ResidualCell_VMSD_AD_btest.cpp
delete src/Discretization/VMSD/AlgebraicEquationSet_VMSD_Linear.h
edit test/unit/pde/NS/PDERANSSA3D_btest.cpp
edit src/pde/PorousMedia/PDEBuckleyLeverett1D.h
edit src/Discretization/VMSD/IntegrandCell_VMSD_NL.h
edit src/Discretization/VMSD/IntegrandCell_VMSD_Output.h
edit src/Discretization/VMSD/IntegrandBoundaryTrace_LinearScalar_sansLG_VMSD.h
edit test/sandbox/Solve2D_VMSD_Triangle_NavierStokes_Joukowski_ArtificialViscosity_toy.cpp
edit test/unit/Discretization/VMSD/VMSD_AD.nb
edit src/pde/NDConvert/PDENDConvertSpaceTime3D.h

Relax tolerance

by galbramc

edit test/unit/Discretization/VMSD/AlgebraicEquationSet_VMSD_Triangle_AD_btest.cpp

added sansBOOM PDE directories, added standard atmosphere

by allmaras

edit test/unit/pde/CMakeLists.txt
add test/unit/pde/sansBOOM/CMakeLists.txt
add src/pde/sansBOOM/CMakeLists.txt
add src/pde/sansBOOM/AtmosphereStandard.h
edit src/pde/CMakeLists.txt
add test/unit/pde/sansBOOM/AtmosphereStandard_btest.cpp

merge conflicts with includes

by allmaras

edit src/Field/NormalField/ProfileLoss/ProfileLoss.cpp

Remove _NL VMSD suffix

by galbramc

edit src/Discretization/VMSD/AlgebraicEquationSet_VMSD.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.h
edit test/unit/Discretization/VMSD/ResidualCell_VMSD_AD_btest.cpp
edit test/unit/Discretization/VMSD/JacobianCell_VMSD_AD_btest.cpp
edit src/ErrorEstimate/VMSD/ErrorEstimate_VMSD.h
edit src/Discretization/VMSD/Integrand_VMSD_fwd.h
edit test/unit/ErrorEstimate/ErrorEstimateCell_VMSD_AD_btest.cpp

Relax timing

by galbramc

edit test/unit/Discretization/Block/CMakeLists.txt

fixed vera squawk

by allmaras

edit src/pde/sansBOOM/AtmosphereStandard.h

refactoring to to keep up with the constant-density gas model in IBL3

by shunz

edit test/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cpp
edit test/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_FP_Auxv_Auxi_IBL3_Quad_btest.cpp
edit test/system/AnalyticSolve/AnalyticSolve3D_IBLFourEqn_StagnationFlow_LamiBL_Triangle_btest.cpp

Enable output functionals on BodyForce LE/TE surfaces

by galbramc

edit src/UserInterfaces/BodyForceSolver_impl.h

Fix body force relative output functionals

by galbramc

edit src/Meshing/EGADS/RotorSource/Rotor.h
edit test/unit/pde/NS/PDEEuler3D_RotorSource_btest.cpp
edit src/Meshing/EGADS/RotorSource/Rotor.cpp
edit src/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.h
edit test/unit/pde/NS/PDEEulermitAVDiffusion3D_RotorSource_btest.cpp
edit src/UserInterfaces/BodyForceSolver_impl.h
edit test/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cpp
edit src/pde/NS/PDEEuler3D_RotorSource.h

Relax tolerance

by galbramc

edit test/unit/Field/Project_DG_to_CG_btest.cpp

Realxer tolerance

by galbramc

edit test/unit/Field/Project_DG_to_CG_btest.cpp

more refactoring to to keep up with the constant-density gas model in IBL3

by shunz

edit test/sandbox/Solve3D_Coupled_FP_IBL3_duct_toy.cpp
edit test/sandbox/Solve3D_Coupled_LIP_IBL3_duct_ring_toy.cpp
edit test/sandbox/Solve3D_Uncoupled_IBLFourEqn_FlatPlate_Blasius_toy.cpp
edit test/sandbox/Solve3D_Uncoupled_IBLFourEqn_FlatPlate_StagnationRadial_toy.cpp

Turbulence model constructor and unit test formatting changes. Functional SA-Catris models and framework for SA-LRe and SA-R models as well.

by waligura

add src/pde/NS/SATurbModel.h
edit src/pde/NS/PDERANSSA2D.h
edit test/unit/pde/NS/PDERANSSA2D_btest.cpp

minor compile error/warning fix

by shunz

edit test/sandbox/Solve3D_Uncoupled_IBLFourEqn_FlatPlate_StagnationRadial_toy.cpp
edit test/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cpp

Pulling in updates for the asymptotically consistent error estimate in VMSD. PDEs have gained an additional typedef, the type of the consistent part of the PDE. This is just the PDEs type for almost all PDEs. New PDE types have been added for using the asymptotic consistency correction for Euler/NS/RANSSA with sensor based artificial diffusion (the originals have been retained for the time being). Updates to the problem interface and the error estimation classes for VMSDBR2 have also been made. Using the asymptotically consistent correction requires some additional data, but the interface for problems not needing that functionality are unchanged.

by blsc

add src/pde/ArtificialViscosity/PDEmitAVSensorInner2D.h
edit src/pde/NS/PDEEulermitAVDiffusion3D.h
edit src/pde/NS/BCEulermitAVDiffusion2D.h
edit src/pde/ArtificialViscosity/AVSensor_Source2D.h
edit src/pde/IBL/PDEIBL3D.h
edit src/pde/PorousMedia/PDEBuckleyLeverett_ArtificialViscosity1D.h
edit src/Discretization/VMSDBR2/SolutionData_VMSD_BR2.h
edit src/pde/NDConvert/PDENDConvertSpace3D.h
edit src/ErrorEstimate/VMSD/ErrorEstimate_VMSD_BR2.h
edit src/pde/Lorenz/PDELorenz.h
edit src/pde/NS/PDEEuler1D.h
edit test/system/CodeConsistency/PDEmitAVSensor2D_Consistency_btest.cpp
edit src/pde/IncompressibleNS/PDEIncompressibleNavierStokes1DChannel.h
edit src/pde/NS/PDERANSSA_Source2D.h
edit src/Adaptation/MOESS/SolverInterface.h
edit src/Discretization/VMSDBR2/AlgebraicEquationSet_Local_VMSD_BR2.h
edit src/pde/PorousMedia/PDETwoPhase2D.h
edit src/pde/IBL/PDEIBLSplitAmpLag2D.h
edit src/pde/NS/PDEEulermitAVDiffusion1D.h
edit src/pde/NDConvert/PDENDConvertSpaceTime3D.h
edit src/pde/NDConvert/PDENDConvertSpaceTime1D.h
edit src/pde/AdvectionDiffusion/PDEAdvectionDiffusion2D.h
edit src/pde/ShallowWater/PDEShallowWater2D_manifold.h
edit src/pde/CauchyRiemann/PDECauchyRiemann2D.h
edit src/pde/NS/PDEEulermitAVDiffusion2D.h
edit src/pde/PorousMedia/PDETwoPhase_ArtificialViscosity2D.h
edit src/pde/FullPotential/PDELinearizedIncompressiblePotential3D.h
edit src/pde/NS/PDEEuler3D_RotorSource.h
edit src/pde/IBL/PDEIBL2D.h
edit src/Discretization/VMSDBR2/AlgebraicEquationSet_VMSD_BR2.h
edit src/pde/SourceOnly/PDESourceOnly3D.h
edit src/SolutionTrek/Continuation/Homotopy/PDEHomotopy.h
edit src/ErrorEstimate/VMSD/ErrorEstimateBase_VMSD.h
edit src/pde/Sensor/PDESensorParameter2D.h
edit src/pde/SourceOnly/PDESourceOnly2D.h
edit src/pde/ArtificialViscosity/PDEmitAVSensor2D.h
edit src/pde/NS/PDERANSSA3D.h
add test/sandbox/Solve2D_VMSDBR2_Euler_RadialShock_AV_HTC_toy.cpp
edit src/pde/PorousMedia/PDETwoPhase1D.h
edit src/pde/FullPotential/PDEFullPotential3D.h
edit src/pde/AdvectionDiffusion/PDEAdvectionDiffusion1D.h
edit src/pde/NS/PDERANSSA_Source3D.h
edit src/pde/HSM/PDEHSM2D.h
edit test/system/LocalSolve/Constrained_Solve_btest.cpp
edit src/ErrorEstimate/VMSD/ErrorEstimateBase_VMSD_BR2.cpp
edit src/pde/HSM/PDEHSMKL.h
edit src/pde/IBL/PDEIBLUniField.h
edit src/pde/PorousMedia/PDETwoPhaseLinearized1D.h
edit src/pde/Burgers/PDEBurgers_ArtificialViscosity2D.h
edit src/pde/NS/PDEEuler1D_Source.h
edit test/sandbox/Adapt2D_VMSDBR2_NavierStokes_LaminarJoukowski_AV_HTC_toy.cpp
edit src/pde/IBL/PDEIBLFourEqn3D.h
edit src/pde/ArtificialViscosity/PDEmitAVSensor3D.h
add test/sandbox/Solve2D_VMSDBR2_Euler_RadialShock_Corrected_AV_HTC_toy.cpp
edit src/pde/Sensor/PDESensorParameter1D.h
edit src/pde/Burgers/PDEBurgers1D.h
edit src/pde/NS/BCEulermitAVSensor2D.h
edit src/pde/NS/PDENavierStokes2D.h
edit src/pde/ShallowWater/PDEShallowWater1D.h
edit src/pde/NS/PDERANSSA2D.h
edit src/pde/FullPotential/PDEIncompressiblePotentialTwoField2D.h
edit src/pde/Burgers/PDEBurgers_ArtificialViscosity1D.h
edit src/pde/NS/PDEEuler2D.h
edit src/pde/FullPotential/PDELinearizedIncompressiblePotential2D.h
edit test/unit/SolutionTrek/Ricatti_btest.h
edit src/Discretization/AlgebraicEquationSet_Type.h
edit src/pde/IncompressibleNS/PDEIncompressibleRANSSA1DChannel.h
edit src/pde/NS/PDERANSSA_Brenner2D.h
edit src/pde/ArtificialViscosity/PDEmitAVSensor1D.h
edit src/pde/NS/PDEEuler3D.h
add src/pde/NS/PDEmitAVDiffusionOuter2D.h
add test/system/CodeConsistency/PDEmitAVDiffusionOuter2D_Consistency_btest.cpp
edit src/pde/NS/PDENavierStokes1D.h
edit src/Field/ProjectSoln/Project_DG_to_CG/Project_DG_to_CG_impl.h
edit src/pde/PorousMedia/PDETwoPhase_ArtificialViscosity1D.h
edit src/Adaptation/MOESS/SolverInterface_VMSD_BR2.h
edit src/pde/NS/PDENavierStokes3D.h
edit test/sandbox/Solve2D_VMSDBR2_RANSSA_Joukowski_HTC_toy.cpp
edit src/pde/NDConvert/PDENDConvertSpace1D.h
edit src/pde/TCNE/PDETCNEEuler1D.h
edit src/pde/NDConvert/PDENDConvertSpaceTime2D.h
edit src/pde/ShallowWater/PDEShallowWater2D.h
edit src/pde/NS/PDENavierStokes_Brenner2D.h
edit src/pde/Distance/PDEEikonal_Distance2D.h
edit src/pde/Stokes/PDEStokes2D.h
edit src/pde/ArtificialViscosity/TraitsArtificialViscosity.h
edit scripts/vera/exclusions.txt
edit src/pde/IBL/ProjectToQauxi2D.h
add test/system/CodeConsistency/PDEmitAVSensorInner2D_Consistency_btest.cpp
edit src/pde/IBL/ProjectToQauxi3D.h
edit src/Adaptation/MOESS/SolverInterfaceBase.h
edit src/ErrorEstimate/VMSD/ErrorEstimateBase_VMSD.cpp
edit src/pde/PorousMedia/PDEBuckleyLeverett1D.h
edit src/pde/NDConvert/PDENDConvertSpace2D.h
edit src/pde/AdvectionDiffusion/PDEAdvectionDiffusion3D.h
edit src/pde/Burgers/PDEBurgers2D.h

updated pyrite files

by shunz

edit test/sandbox/Solve3D_Uncoupled_IBLFourEqn_FlatPlate_StagnationRadial_toy.cpp
edit test/system/AnalyticSolve/AnalyticSolve3D_IBLFourEqn_StagnationFlow_LamiBL_Triangle_btest.cpp
edit test/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d2_p0_Test.txt
edit test/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d2_p2_Test.txt
edit test/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d1_p3_Test.txt
edit test/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d2_p1_Test.txt
edit test/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d1_p0_Test.txt
edit test/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d1_p2_Test.txt
edit test/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d1_p1_Test.txt
edit test/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d1_p4_Test.txt
edit test/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d2_p3_Test.txt
edit test/system/IO/AnalyticSolve/IBLFourEqn3D_StagnationFlow_LamiBL_Triangle_nelem1d2_p4_Test.txt

Cleaned up AVSensor_Source2D.h a little bit to remove some unused code.

by blsc

edit src/pde/ArtificialViscosity/AVSensor_Source2D.h

Missed vera warning

by blsc

edit src/pde/ArtificialViscosity/PDEmitAVSensorInner2D.h

Forgot to turn off verbose and file output

by shunz

edit test/system/AnalyticSolve/AnalyticSolve3D_IBLFourEqn_StagnationFlow_LamiBL_Triangle_btest.cpp

Missed another vera warning

by blsc

edit test/sandbox/Solve2D_VMSDBR2_RANSSA_Joukowski_HTC_toy.cpp

relaxed tolerance

by shunz

edit test/unit/Field/Project_DG_to_CG_btest.cpp

Fix so 2D avro works for wirebody

by galbramc

edit src/Meshing/avro/XField_avro_2D.cpp
edit test/unit/Meshing/avro/XField_avro_btest.cpp

removed reference (&,) for meshing parameter vector

by allmaras

edit src/Meshing/avro/XField_avro_4D.cpp
edit src/Meshing/avro/XField_avro_2D.cpp
edit src/Meshing/avro/XField_avro_3D.cpp
edit src/Meshing/avro/XField_avro.h

Added a N-S case of laminar BL

by shunz

add test/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cpp

added velocity integral output

by allmaras

edit src/pde/IncompressibleNS/OutputIncompressibleNavierStokes1DChannel.h

Fixed the remaining clang and gnu11 compiler warnings.

by blsc

edit test/sandbox/Adapt2D_VMSDBR2_NavierStokes_LaminarJoukowski_AV_HTC_toy.cpp
edit src/pde/NS/BCEuler2D_mitState.h
edit src/Adaptation/MOESS/SolverInterface_VMSD_BR2.h

template parameter modification for grid-Laplacian and minor edits

by allmaras

edit src/pde/NS/BCEulermitAVSensor2D.h
edit src/pde/NS/PDEEulermitAVDiffusion3D.h

cleaned up NS laminar BL sandbox case

by shunz

edit test/sandbox/Solve3D_Coupled3x3_IBLFourEqn_FlatPlate_torpedo_agrid45_toy.cpp
edit test/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cpp

Separated findElement() function into a dedicated file

by shunz

edit src/Field/ElementCounter.h
add src/Field/FindElementFromX.h

Refactored findTraceElement to use simple bounding box check without resorting to the kd-tree hammer... , Added unit test

by shunz

add test/unit/Field/FindElementFromX_btest.cpp
edit src/Field/FindElementFromX.h

Refactor Homotopy so it can be used with any PDE

by galbramc

edit test/sandbox/ErrorOrder_2D_VMSD_Triangle_AD_toy.cpp
edit test/unit/pde/CMakeLists.txt
edit test/unit/pde/NS/PDEEuler2D_btest.cpp
edit src/SolutionTrek/Continuation/Homotopy/Homotopy.h
edit test/unit/SolutionTrek/Continuation/DissipationBased_btest.cpp
edit test/sandbox/Adapt2D_VMSD_RANSSA_Joukowski_toy.cpp
edit src/pde/NS/IsmailRoe.h
edit test/sandbox/Adapt2D_VMSDBR2_NavierStokes_Blottner_Mach20_AV_HTC_toy.cpp
edit src/pde/NS/Q2DPrimitiveRhoPressure.h
edit test/system/CodeConsistency/PDESourceOnly_Projection_btest.cpp
edit src/pde/NS/Q3DEntropy.h
edit src/pde/ArtificialViscosity/PDEmitAVSensor2D.h
edit test/unit/SolutionTrek/Continuation/Homotopy_btest.cpp
edit test/sandbox/Adapt3D_VMSDBR2_RANSSA_DPW_AV_HTC_toy.cpp
edit src/SolutionTrek/Continuation/Homotopy/PDEHomotopy.h
edit src/SolutionTrek/Continuation/Homotopy/AlgebraicEquationSet_HTC.h
edit test/unit/pde/NS/PDEEuler3D_btest.cpp
edit src/SolutionTrek/Continuation/Continuation.cpp
delete test/system/CodeConsistency/BCEulermitAVSensor2D_Consistency_afield_btest.cpp
edit test/unit/Discretization/VMSDBR2/ProjectL2_VMSD_BR2_Source_btest.cpp
delete test/system/CodeConsistency/BCEulermitAVSensor2D_Consistency_RANSSA_afield_btest.cpp
edit src/pde/NS/Q3DPrimitiveRhoPressure.h
delete test/unit/pde/SourceOnly/PDESourceOnly2D_btest.cpp
edit test/sandbox/Adapt2D_VMSDBR2_NavierStokes_LaminarJoukowski_AV_HTC_P1_2k_toy.cpp
edit src/tools/Tuple.h
edit src/Field/HField/GenHField_DG.h
edit test/sandbox/Solve3D_VMSDBR2_BlottnerSphere_AV_HTC_toy.cpp
edit src/Adaptation/MOESS/ParamFieldBuilder.h
edit test/sandbox/Solve3D_VMSD_RANSSA_OjedaMMS_toy.cpp
edit test/unit/pde/NS/PDERANSSA2D_btest.cpp
edit test/unit/pde/ArtificialViscosity/PDEmitAVSensor2D_btest.cpp
edit src/pde/CMakeLists.txt
edit test/system/CodeConsistency/VMSDBR2_BubbleModes_btest.cpp
edit src/pde/NS/QRANSSA2D.h
edit test/sandbox/Solve2D_VMSDBR2_RANSSA_Joukowski_HTC_toy.cpp
edit src/Adaptation/MOESS/SolverInterface_VMSD_BR2.h
edit test/system/LocalSolve/Constrained_Solve_btest.cpp
edit src/pde/AdvectionDiffusion/PDEAdvectionDiffusion2D.h
edit test/unit/Adaptation/MOESS/ParamFieldBuilder_btest.cpp
edit src/pde/NS/PDEEulermitAVDiffusion3D.h
edit src/Field/HField/GenHField_DG/GenHField_DG_impl.h
edit src/pde/AdvectionDiffusion/PDEAdvectionDiffusion3D.h
delete test/sandbox/duct_meshing_UROP_toy.cpp
edit test/sandbox/Solve2D_VMSDBR2_Euler_RadialShock_AV_HTC_toy.cpp
edit src/pde/NDConvert/PDENDConvertSpace3D.h
delete test/system/CodeConsistency/PDEmitAVSensor2D_Consistency_afield_btest.cpp
edit test/unit/NonLinearSolver/NewtonSolver_btest.cpp
delete src/pde/SourceOnly/BCSourceOnly2D.h
edit src/Field/ProjectSoln/Project_DG_to_CG/Project_DG_to_CG_impl.h
edit src/pde/NS/Roe.h
edit src/pde/NS/QRANSSA3D.h
add src/SolutionTrek/Continuation/Homotopy/Homotopy.cpp
edit test/unit/SolutionTrek/Continuation/Homotopy_Euler_btest.cpp
edit src/SolutionTrek/Continuation/Continuation.h
edit src/pde/NS/PDEEulermitAVDiffusion2D.h
edit src/Discretization/AlgebraicEquationSet_Type.h
edit src/pde/NS/PDERANSSA3D.h
delete src/pde/SourceOnly/CMakeLists.txt
edit src/pde/NS/Q2DEntropy.h
edit src/LinearAlgebra/SparseLinAlg/SparseLinAlg_LinearSolver.cpp
edit test/sandbox/Solve2D_VMSDBR2_HOW5_VI2_AV_HTC_toy.cpp
edit src/NonLinearSolver/NewtonSolver_impl.h
edit test/unit/pde/FullPotential/PDELinearizedIncompressiblePotential3D_btest.cpp
edit test/sandbox/Solve2D_VMSDBR2_Euler_RadialShock_Corrected_AV_HTC_toy.cpp
edit src/SolutionTrek/Continuation/CMakeLists.txt
delete test/unit/pde/SourceOnly/CMakeLists.txt
delete src/pde/SourceOnly/PDESourceOnly3D.h
delete test/sandbox/annulus_meshing_UROP_toy.cpp
edit test/unit/pde/ArtificialViscosity/PDEmitAVSensor3D_btest.cpp
delete test/system/CodeConsistency/PDEmitAVSensor2D_Consistency_RANSSA_afield_btest.cpp
edit src/pde/ArtificialViscosity/PDEmitAVSensorInner2D.h
add test/unit/SolutionTrek/Continuation/PDESourceOnly_btest.cpp
edit src/pde/ArtificialViscosity/PDEmitAVSensor3D.h
add src/SolutionTrek/Continuation/Homotopy/PDESourceOnly.h
delete src/pde/SourceOnly/PDESourceOnly2D.h
edit src/pde/NS/PDEEuler2D.h
edit src/pde/NDConvert/PDENDConvertSpace2D.h
edit src/pde/NS/PDEEuler3D.h
edit src/pde/NS/PDERANSSA2D.h
delete test/unit/pde/SourceOnly/PDESourceOnly3D_btest.cpp
edit test/sandbox/Solve2D_VMSDBR2_HOW5_VI2_Surface_AV_HTC_toy.cpp
edit src/SolutionTrek/Continuation/Homotopy/BCHomotopy.h
edit test/sandbox/Adapt2D_VMSDBR2_NavierStokes_LaminarJoukowski_AV_HTC_toy.cpp

Fix warnings

by galbramc

edit test/system/CodeConsistency/PDESourceOnly_Projection_btest.cpp

Expose Viscous body force coefficients as user inputs

by galbramc

edit src/UserInterfaces/BodyForceSolver_impl.h
edit src/Meshing/EGADS/RotorSource/Rotor.cpp
edit test/unit/pde/NS/PDEEuler3D_RotorSource_btest.cpp
edit test/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cpp
edit src/pde/NS/PDEEuler3D_RotorSource.h
edit src/Meshing/EGADS/RotorSource/Rotor.h
edit test/unit/pde/NS/PDEEulermitAVDiffusion3D_RotorSource_btest.cpp

Nightly fixes

by galbramc

edit test/system/CodeConsistency/CMakeLists.txt
edit scripts/jenkins/SANS_Nightly.sh

Added BL profile extraction capability to a NS sandbox case

by shunz

edit test/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cpp
edit src/Field/ProjectSoln/PointwiseSolutionStorage.cpp

Refactored 3D Tet flat plate grid. , Added mutable access to AES in solver interface (but only able to use it by commenting out exception). , More refactoring to NS laminar BL sandbox case

by shunz

edit test/unit/UnitGrids/XField3D_CornerFlatPlate_X1.h
edit test/unit/UnitGrids/XField3D_FlatPlate_X1.h
edit test/unit/UnitGrids/XField3D_FlatPlate_X1.cpp
edit test/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cpp
edit src/Adaptation/MOESS/SolverInterface.h
edit src/Discretization/VMSDBR2/SolutionData_VMSD_BR2.h

minor cleanup of sandbox case

by shunz

edit test/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cpp

negated lapse rates for standard atmosphere -- now definition consistent with official data

by allmaras

edit test/unit/pde/sansBOOM/AtmosphereStandard_btest.cpp
edit src/pde/sansBOOM/AtmosphereStandard.h

fixed warnings: size_t vs int

by shunz

edit test/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cpp

turned off projection between different grids when doing solution sequencing because it does not work due to (probably) a bug...

by shunz

edit test/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cpp
edit test/unit/UnitGrids/XField3D_FlatPlate_X1.cpp

Fix mistake in body force

by galbramc

edit src/UserInterfaces/BodyForceSolver_impl.h

Change some QCR variable types in PDERANS and other formatting changes for successful make check. Updated PDERANS and b_test to be consistent with current changes on develop

by waligura

edit src/pde/NS/PDERANSSA2D.h
edit test/sandbox/Solve2D_DGBR2_Triangle_RANSSA_OjedaMMS_toy.cpp
edit test/system/Asymptotic/ErrorOrder_2D_CGStabilized_RANS_MMS_btest.cpp
edit test/unit/pde/NS/PDEEulermitAVDiffusion2D_RANSSA_btest.cpp
edit src/pde/NS/PDENavierStokes2D.h
edit test/system/Asymptotic/ErrorOrder_2D_DGBR2_RANS_MMS_btest.cpp
edit src/pde/NS/SATurbModel.h
edit test/unit/pde/NS/PDERANSSA2D_btest.cpp

fixed warnings: size_t vs int

by shunz

edit test/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cpp

bug fix in user input

by shunz

edit test/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cpp

make NS solution interpreters more consistent between rho-p and rho-T

by allmaras

edit src/pde/NS/Q2DPrimitiveRhoTemperature.h
edit test/unit/pde/NS/Q3DPrimitiveRhoTemperature_btest.cpp
edit test/unit/pde/NS/Q2DPrimitiveRhoTemperature_btest.cpp
edit test/unit/pde/NS/Q2DPrimitiveRhoPressure_btest.cpp
edit test/unit/pde/NS/Q3DPrimitiveRhoPressure_btest.cpp
edit src/pde/NS/Q3DPrimitiveRhoPressure.h
edit src/pde/NS/Q3DPrimitiveRhoTemperature.h

fixed style. minor tweak in PETSc setup in a test case

by shunz

edit test/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cpp

Refactored grid and test case for NS LamiBL

by shunz

edit test/unit/UnitGrids/XField3D_FlatPlate_X1.h
edit test/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cpp
edit test/unit/UnitGrids/XField3D_FlatPlate_X1.cpp

Changes to diffusionViscous and diffusionViscousGradient unit tests to check Catris variations. Still working on the formatting but will push this version for now

by waligura

edit src/pde/NS/PDERANSSA2D.h
edit test/unit/pde/NS/PDERANSSA2D_btest.cpp

added ORNL MMS function

by allmaras

edit test/unit/pde/NS/NavierStokesSolutionFunction2D_btest.cpp
edit src/pde/NS/SolutionFunction_NavierStokes2D.cpp
edit src/pde/NS/SolutionFunction_NavierStokes2D.h

Pushing again with vera changes. Something seems to be up with my vera check

by waligura

edit src/pde/NS/PDERANSSA2D.h

Another vera message I did not see before sending

by waligura

edit src/pde/NS/SATurbModel.h

Relaxed convergence tolerance in a test case

by shunz

edit test/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cpp
edit src/Adaptation/MOESS/SolverInterface.h

Further formatting changes to PDERANS and another vera error I missed initially

by waligura

edit test/unit/pde/NS/PDEEulermitAVDiffusion2D_RANSSA_btest.cpp
edit test/unit/pde/NS/PDERANSSA2D_btest.cpp
edit src/pde/NS/PDERANSSA2D.h

Further formatting changes fixing most of the alignment issues and getting rid of the -=

by waligura

edit test/unit/pde/NS/PDERANSSA2D_btest.cpp
edit src/pde/NS/PDERANSSA2D.h

fixed bug in std::vector initialization for standard atmosphere class

by allmaras

edit src/pde/sansBOOM/AtmosphereStandard.h

Refactored BL sampling function in NS LamiBL test case

by shunz

edit test/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cpp

Add ddelta dump for RotorSource

by galbramc

edit test/unit/pde/NS/PDEEuler2D_btest.cpp
edit src/Field/output_Tecplot/output_Tecplot_RotorSource.cpp
edit src/UserInterfaces/BodyForceSolver_impl.h
edit src/pde/NS/PDEEuler3D_RotorSource.h

Fix warning

by galbramc

edit src/pde/NS/PDEEuler3D_RotorSource.h

Working Changes: Finalized AD Burgers test case for boom propagation

by cwomack

edit test/unit/pde/AdvectionDiffusion/AdvectiveFlux1D_btest.cpp
edit src/NonLinearSolver/LineUpdate/HalvingSearchLineUpdate_impl.h
edit test/unit/pde/Burgers/PDEBurgers1D_btest.cpp
edit src/pde/AdvectionDiffusion/AdvectiveFlux1D.h
edit src/Discretization/HDG/AlgebraicEquationSet_HDG.h
edit test/system/IO/ErrorOrder/ErrorOrder_1D_HDG_Burgers_MinTest.txt
edit test/unit/pde/AdvectionDiffusion/BCAdvectionDiffusion1D_btest.cpp
edit test/unit/IO/NonLinearSolver/linesearch_residuals.dat
edit src/BasisFunction/BasisFunctionArea_Triangle_Lagrange.cpp
edit test/unit/IO/pde/ScalarFunction1D_pattern.txt
edit test/sandbox/Adapt2D_DGBR2_AD_Burgers_ST_toy.cpp
edit test/unit/Meshing/avro/XField_avro_btest.cpp
edit src/pde/AnalyticFunction/ScalarFunction1D.cpp
edit test/system/IO/ErrorOrder/ErrorOrder_1D_DGBR2_Burgers_MinTest.txt
edit test/system/IO/ErrorOrder/ErrorOrder_1D_HDG_Burgers_FullTest.txt
edit test/sandbox/Adapt2D_DGBR2_Burgers_ST_toy.cpp
edit test/unit/Meshing/avro/MesherInterface_avro_btest.cpp
edit test/unit/pde/AnalyticFunction/ScalarFunction1D_btest.cpp
edit test/system/IO/ErrorOrder/ErrorOrder_1D_DGBR2_Burgers_FullTest.txt
edit src/NonLinearSolver/LineUpdate/HalvingSearchLineUpdateParams.cpp
edit test/system/Asymptotic/ErrorOrder_1D_HDG_Burgers_btest.cpp
edit test/unit/NonLinearSolver/HalvingSearchLineUpdate_btest.cpp
edit src/pde/Burgers/PDEBurgers1D.h
edit src/NonLinearSolver/LineUpdate/HalvingSearchLineUpdate.h
edit test/unit/pde/AdvectionDiffusion/OutputAdvectionDiffusion_btest.cpp
edit src/pde/AnalyticFunction/ScalarFunction1D.h
edit test/system/BlockSolve/Block_1D_Decoupled_Burgers_btest.cpp
edit src/Discretization/VMSDBR2/AlgebraicEquationSet_VMSD_BR2.h
edit test/unit/pde/Burgers/PDEBurgers_ArtificialViscosity1D_btest.cpp

Small cleanup

by galbramc

edit test/sandbox/Adapt2D_DGBR2_Triangle_RANSSA_RAE2822_ArtificialViscosity_toy.cpp
edit test/unit/Python/PyDict_btest.cpp
edit src/Discretization/VMSDBR2/ResidualBoundaryTrace_VMSD_BR2.h
edit test/sandbox/Adapt2D_DGBR2_Triangle_RANSSA_Joukowski_Subsonic_ArtificialViscosity_toy.cpp

Remove output_grm

by galbramc

edit test/sandbox/Adapt2D_L2Project_MOESS_toy.cpp
edit test/system/Asymptotic/ErrorEstimateOrder_2D_HDG_Triangle_AD_btest.cpp
edit test/sandbox/Adapt2D_DGBR2_RANSSA_Joukowski_toy.cpp
edit test/sandbox/Adapt2D_Galerkin_Stabilized_AR_toy.cpp
edit test/sandbox/Adapt2D_CGStabilized_Triangle_RANSSA_Joukowski_Transonic_ArtificialViscosity_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_Triangle_RANSSA_Joukowski_Transonic_ArtificialViscosity_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_AR_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_Triangle_RANSSA_Joukowski_Subsonic_toy.cpp
edit test/unit/UnitGrids/XField2D_GilesPierceNozzle_HACK_btest.cpp
edit test/unit/UnitGrids/XField2D_FlatPlate_X1_btest.cpp
edit test/sandbox/Adapt1D_DGBR2_Line_Euler_GilesPierce_toy.cpp
edit test/sandbox/Adapt2D_Galerkin_Stabilized_AD_Pollutant_toy.cpp
edit test/sandbox/Adapt2D_Galerkin_Stabilized_Helmholtz_toy.cpp
edit test/sandbox/Adapt2D_Galerkin_Stabilized_AD_DoubleBoundaryLayer_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_Helmholtz_toy.cpp
edit test/unit/Field/XField_Lagrange_Partition_btest.cpp
edit test/unit/UnitGrids/XField3D_FlatPlate_X1_btest.cpp
edit test/sandbox/Solve2D_DGBR2_Triangle_RANSSA_Joukowski_toy.cpp
edit src/Field/CMakeLists.txt
edit test/sandbox/Adapt1D_Galerkin_Stabilized_AD_BoundaryLayer_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_Triangle_RANSSA_RAE2822_ArtificialViscosity_toy.cpp
edit test/unit/Field/XField_Lagrange_btest.cpp
edit test/sandbox/Adapt2D_DGBR2_Triangle_RANSSA_Joukowski_Subsonic_ArtificialViscosity_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_L2_ASExp_toy.cpp
edit test/system/Asymptotic/ErrorOrder_2D_L2Project_Bernstein_btest.cpp
edit test/sandbox/Solve2D_DGBR2_Triangle_NavierStokes_Joukowski_toy.cpp
edit test/unit/Meshing/EPIC/XField_PX_btest.cpp
edit scripts/valgrind/valgrind-python.supp
edit test/sandbox/Adapt2D_VMSDBR2_AD_DoubleBoundaryLayer_toy.cpp
edit test/sandbox/Solve2D_L2Project_MOESS_toy.cpp
edit test/sandbox/Adapt2D_CGStabilized_Triangle_RANSSA_Joukowski_ArtificialViscosity_toy.cpp
edit test/sandbox/Adapt2D_DGAdvective_Euler_CubicSource_toy.cpp
edit test/system/Asymptotic/ErrorEstimateOrder_1D_DGBR2_Line_AD_btest.cpp
edit test/unit/UnitGrids/XField2D_Duct_Triangle_Lagrange_Xq_btest.cpp
edit test/sandbox/Adapt2D_CGStabilized_Triangle_RANSSA_Joukowski_Subsonic_toy.cpp
edit test/sandbox/Adapt2D_DGAdvective_Euler_Joukowski_Pointwise_toy.cpp
edit test/unit/Field/XField_BoundaryTrace_btest.cpp
edit test/sandbox/Adapt2D_VMSDBR2_NavierStokes_LaminarJoukowski_AV_HTC_toy.cpp
edit test/sandbox/Adapt2D_CGStabilized_Triangle_RANSSA_Joukowski_Subsonic_ArtificialViscosity_toy.cpp
delete src/Field/output_grm.h
edit src/Field/output_fluent.cpp
edit test/unit/UnitGrids/XField2D_CubicSourceBump_Xq_btest.cpp
edit scripts/valgrind/Ubuntu.supp
edit test/sandbox/Adapt1D_Galerkin_Stabilized_AR_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_Poisson_toy.cpp
edit test/sandbox/Adapt2D_Galerkin_Stabilized_Euler_CubicSource_toy.cpp
edit test/sandbox/Adapt2D_VMSDBR2_NavierStokes_LaminarJoukowski_AV_HTC_P1_2k_toy.cpp
edit test/unit/UnitGrids/XField3D_CornerFlatPlate_X1_btest.cpp
edit test/sandbox/Adapt2D_DGBR2_Triangle_RANSSA_Joukowski_ArtificialViscosity_toy.cpp
delete src/Field/output_grm.cpp
edit test/sandbox/Adapt2D_DGBR2_Triangle_RANSSA_NACA0012_ArtificialViscosity_toy.cpp
edit test/sandbox/Adapt2D_VMSD_AD_DoubleBoundaryLayer_toy.cpp
edit test/sandbox/Adapt1D_DGAdvective_Line_Euler_GilesPierce_toy.cpp
edit test/sandbox/Adapt2D_VMSDBR2_NavierStokes_Blottner_Mach20_AV_HTC_toy.cpp
edit test/sandbox/Adapt2D_VMSD_Triangle_RANSSA_Joukowski_ArtificialViscosity_toy.cpp
edit test/sandbox/Adapt2D_CGStabilized_HOW5_CI1_ArtificialViscosity_toy.cpp
edit test/system/Asymptotic/ErrorEstimateOrder_2D_DGBR2_Triangle_AD_btest.cpp

1st pass at exact ray path for sansBOOM

by allmaras

edit src/pde/sansBOOM/AtmosphereStandard.h
add test/unit/pde/sansBOOM/RayPath_btest.cpp
add src/pde/sansBOOM/RayPath.h
edit test/unit/pde/sansBOOM/AtmosphereStandard_btest.cpp

Wording changes to SATurbModel and shortening of nonc variables

by waligura

edit src/pde/NS/PDERANSSA2D.h
edit src/pde/NS/SATurbModel.h

Fixed long line. , Separated functions into a cpp file

by shunz

edit src/Field/FindElementFromX.h
edit test/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cpp
edit src/Field/CMakeLists.txt
add src/Field/FindElementFromX.cpp

Fixed compile and linker errors in findTraceElement(...)

by shunz

edit src/Field/FindElementFromX.cpp

Added support for S-shaped duct geomerty in flat plate grid in 3D

by shunz

edit test/unit/UnitGrids/XField3D_FlatPlate_X1.h
edit test/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cpp
edit test/unit/UnitGrids/XField3D_FlatPlate_X1.cpp

adding in the first go at untest SA_R and SA_LRe modifications for 2D. Also making sure all pushes are going through before moving on.

by waligura

edit src/pde/NS/PDERANSSA2D.h

fixed file I/O mode

by shunz

edit test/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cpp

added check for file I/O

by shunz

edit test/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cpp

Added a sin duct geometry for IBL3 sandbox case

by shunz

edit test/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cpp
edit test/unit/UnitGrids/XField3D_Box_Hex_X1.cpp
edit test/unit/UnitGrids/XField3D_Box_Hex_X1.h

Initial commit of sansBOOM PDE implementation with the advective and viscous terms defined

by darmofal

add test/unit/pde/sansBOOM/PDEsansBOOM_btest.cpp
add src/pde/sansBOOM/Traits_sansBOOM.h
add src/pde/sansBOOM/PDEsansBOOM.h

refactored Flux_mitState BC implementation for IBL3 to use fluxNormal() instead of evaluating it in the integrand class

by shunz

edit src/pde/NDConvert/BCNDConvertSpace3D.h
edit src/pde/IBL/BCIBL2D.h
edit src/pde/NDConvert/BCNDConvertSpace2D.h
edit src/Discretization/Galerkin/IntegrandBoundaryTrace_Flux_mitState_Galerkin_manifold.h
edit src/pde/IBL/BCIBL3D.h

Minor fixes for artificial viscosity

by galbramc

edit src/pde/NS/Q2DPrimitiveSurrogate.h
edit test/unit/pde/NS/Q2DPrimitiveSurrogate_btest.cpp
edit src/pde/ArtificialViscosity/PDEmitAVSensor2D.h
edit src/pde/NS/PDERANSSA2D.h

Turned on mitLG Dirichlet BC for LIP-IBL3 case at inlet. , Fixed buggy isValidState check that checks uninialized boundary state qB

by shunz

edit src/pde/IBL/BCIBL3D.h
edit test/sandbox/Solve3D_Coupled_LIP_IBL3_duct_toy.cpp
edit src/Discretization/isValidState/isValidStateBoundaryTrace_mitLG.h

Initial implementation of sansBOOM BCs and Adapt2D_DGBR2_sansBOOM_toy

by darmofal

add test/sandbox/Adapt2D_DGBR2_sansBOOM_toy.cpp
add src/pde/sansBOOM/BCsansBOOM.h
add src/pde/sansBOOM/BCsansBOOM.cpp

Forgot to commit a few lines

by shunz

edit src/pde/IBL/BCIBL3D.h

Some more edits to sansBOOM PDE/BC implementation

by darmofal

edit src/pde/sansBOOM/BCsansBOOM.h
edit src/pde/sansBOOM/PDEsansBOOM.h
edit test/sandbox/Adapt2D_DGBR2_sansBOOM_toy.cpp

Changed default xtr parameter in IBL transition model from max Real (causing floating point overflow error) to 1e5

by shunz

edit src/pde/IBL/FluidModels.h
edit src/pde/IBL/PDEIBLSplitAmpLag2D.h

Fixed (1) division by zero in cut-cell natural transition and (2) unit test for default xtr value

by shunz

edit src/Field/Element/GalerkinWeightedIntegral_New.h
edit test/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellForcedTransitionIBL_Panel_btest.cpp
edit test/unit/pde/IBL/FluidModels_btest.cpp

Still not compiling. , Pushing to allow Marshall to look at N=1 issue

by darmofal

edit src/pde/sansBOOM/PDEsansBOOM.h
edit test/sandbox/Adapt2D_DGBR2_sansBOOM_toy.cpp
add src/pde/sansBOOM/OutputsansBOOM.h
edit src/pde/sansBOOM/Traits_sansBOOM.h

Initializing a variable in jacobianFluxViscous correctly

by waligura

edit src/pde/NS/PDERANSSA2D.h

Allow PDE to use ArrayQ = VectorS<,1,T>,

by galbramc

edit src/LinearAlgebra/VectorType.h

Homotopy dict fixes

by galbramc

edit src/SolutionTrek/Continuation/Homotopy/Homotopy.cpp
edit src/SolutionTrek/Continuation/Homotopy/Homotopy.h

Final changes to LocalLaxFriedrichs1D flux function and AD Burgers toy

by cwomack

edit src/pde/AdvectionDiffusion/AdvectiveFlux1D.h
edit test/unit/Meshing/avro/XField_avro_btest.cpp
edit test/sandbox/Adapt2D_DGBR2_AD_Burgers_ST_toy.cpp

Remove GLPK

by galbramc

delete src/Optimization/Methods/Linear/LOptSolver.cpp
delete src/Optimization/Methods/Linear/LOptSolver.h
delete test/unit/Optimization/Problems/Truss/TrussOptimization_wo_adapt_btest.cpp
delete src/Optimization/Problems/Truss/LengthFrame_Truss.h
edit scripts/cppcheck/suppressions.txt
delete src/Optimization/Methods/Linear/GLPK/GLPKSolver_impl.h
delete test/unit/Optimization/Problems/Truss/CMakeLists.txt
delete test/unit/Optimization/Methods/Linear/CMakeLists.txt
delete src/Optimization/Methods/Linear/GLPK/GLPKSolver_CRS_double.cpp
delete src/Optimization/Methods/Linear/GLPK/GLPKSolver_defines.h
delete test/unit/Optimization/Problems/Truss/LOpt_unit_fixture.cpp
delete src/Optimization/Problems/Truss/CMakeLists.txt
delete test/unit/Optimization/CMakeLists.txt
delete test/unit/Optimization/Methods/Linear/GLPK_btest.cpp
delete src/Optimization/Problems/Truss/LengthObjective_Truss_Boundary.h
edit CMakeInclude/Dependencies.cmake
delete test/unit/Optimization/Methods/Linear/LOptSolver_btest.cpp
delete src/Optimization/Methods/Linear/GLPK/GLPKSolver.h
delete test/unit/Optimization/Problems/Truss/ConstraintFrame_Truss_btest.cpp
delete src/Optimization/Methods/Linear/GLPK/GLPKSolver_CRS_MatrixS.cpp
delete test/unit/Optimization/Problems/CMakeLists.txt
delete src/Optimization/Methods/Linear/CMakeLists.txt
delete src/Optimization/Methods/Linear/GLPK/GLPKSolver.cpp
delete src/Optimization/Problems/CMakeLists.txt
delete src/Optimization/Problems/Truss/ConstraintFrame_Truss.h
delete src/Optimization/Problems/Truss/JacobianConstraint_Truss.h
delete src/Optimization/Methods/CMakeLists.txt
edit CMakeInclude/MakeSummaryFile.cmake
delete test/unit/Optimization/Problems/Truss/LengthFrame_Truss_btest.cpp
edit src/CMakeLists.txt
delete test/unit/Optimization/Problems/Truss/LengthObjective_Truss_btest.cpp
delete src/Optimization/CMakeLists.txt
delete test/unit/Optimization/Problems/Truss/JacobianConstraint_Truss_btest.cpp
edit test/unit/CMakeLists.txt
delete test/unit/Optimization/Methods/CMakeLists.txt
delete test/unit/Optimization/Methods/Linear/GLPK_unit_fixture.cpp
delete src/Optimization/Methods/Linear/GLPK/GLPKSolver_MatrixD_CRS_MatrixS.cpp
delete src/Optimization/Methods/Linear/LOptSolverBase.h
delete src/Optimization/Problems/Truss/JacobianConstraint_Truss_Boundary.h
delete src/Optimization/Problems/Truss/LengthObjective_Truss.h
delete CMakeInclude/Finds/FindGLPK.cmake

Missed one

by galbramc

edit CMakeLists.txt

Pushing current version of sansBOOM to repo

by darmofal

edit src/pde/sansBOOM/OutputsansBOOM.h
edit test/sandbox/Adapt2D_DGBR2_sansBOOM_toy.cpp
edit src/pde/sansBOOM/BCsansBOOM.h
edit src/pde/sansBOOM/PDEsansBOOM.h
edit src/pde/sansBOOM/Traits_sansBOOM.h

Enable 3D sourcePositivity for NS and RANSSA

by galbramc

edit src/pde/NS/PDEEulermitAVDiffusion3D.h
edit test/unit/pde/NS/PDEEulermitAVDiffusion3D_btest.cpp
edit test/unit/pde/NS/PDEEulermitAVDiffusion3D_RANSSA_btest.cpp

Most recent mods to sansBOOM implementation

by darmofal

edit src/pde/NDConvert/OutputNDConvertSpaceTime1D.h
edit src/pde/sansBOOM/Traits_sansBOOM.h
edit src/pde/sansBOOM/BCsansBOOM.h
edit src/pde/sansBOOM/PDEsansBOOM.h

Removed changes to Lagrange Triangle

by cwomack

edit src/BasisFunction/BasisFunctionArea_Triangle_Lagrange.cpp

Fix compile error

by galbramc

edit test/unit/pde/NS/PDEEulermitAVDiffusion3D_RANSSA_btest.cpp

Fixed Robin boundary condition for Euler/NS/RANSSA with sensor equation. Updated unit tests to reflect fix.

by blsc

edit src/pde/NS/BCEulermitAVSensor2D.h
add test/unit/pde/NS/BCEulermitAVSensor3D_btest.cpp
edit src/pde/NS/BCEulermitAVSensor3D.h
edit test/unit/pde/NS/BCEulermitAVSensor2D_btest.cpp
edit test/system/CodeConsistency/BCEulermitAVSensor3D_Consistency_btest.cpp

Compile fixes

by galbramc

edit src/pde/NS/BCEulermitAVSensor3D.h

Another compile fix

by galbramc

edit test/sandbox/Adapt3D_CGStabilized_RANSSA_ArtificialViscosity_ONERA_M6_toy.cpp

Corrected Vera errors

by cwomack

edit test/unit/pde/AdvectionDiffusion/OutputAdvectionDiffusion_btest.cpp
edit test/sandbox/Adapt2D_DGBR2_AD_Burgers_ST_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_Burgers_ST_toy.cpp
edit src/pde/AdvectionDiffusion/BCAdvectionDiffusion1D.cpp
edit src/pde/Burgers/BCBurgers1D.cpp

More compile fixes

by galbramc

edit test/sandbox/Solve3D_DGBR2_RANSSA_CRM_toy.cpp
edit test/sandbox/Adapt3D_DGBR2_RANSSA_ArtificialViscosity_ONERA_M6_toy.cpp
edit test/sandbox/Adapt3D_DGBR2_RANSSA_CRM_toy.cpp

Fix consistency test

by galbramc

edit test/system/CodeConsistency/BCEulermitAVSensor3D_Consistency_RANSSA_btest.cpp

Modified Discretization unit tests to be consistent with linesearch

by cwomack

add test/unit/IO/Discretization/AlgebraicEquationSet_Galerkin_BL_fullstep_iPDE_iter0.plt
add test/unit/IO/Discretization/AlgebraicEquationSet_HDG_BL_fullstep_iPDE_iter0.plt
edit test/unit/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_BuckleyLeverett_ST_btest.cpp
add test/unit/IO/Discretization/AlgebraicEquationSet_HDG_BL_delta_iPDE_iter0.plt
edit test/unit/Discretization/DG/AlgebraicEquationSet_DGBR2_BuckleyLeverett_ST_btest.cpp
edit test/sandbox/Adapt2D_DGBR2_AD_Burgers_ST_toy.cpp
add test/unit/IO/Discretization/AlgebraicEquationSet_DGAdvective_BL_fullstep_iPDE_iter0.plt
add test/unit/IO/Discretization/AlgebraicEquationSet_DGBR2_BL_delta_iPDE_iter0.plt
edit test/unit/Discretization/HDG/AlgebraicEquationSet_HDG_BuckleyLeverett_ST_btest.cpp
add test/unit/IO/Discretization/AlgebraicEquationSet_DGBR2_BL_fullstep_iPDE_iter0.plt
add test/unit/IO/Discretization/AlgebraicEquationSet_DGAdvective_BL_delta_iPDE_iter0.plt
edit test/unit/Discretization/DG/AlgebraicEquationSet_DGAdvective_BuckleyLeverett_ST_btest.cpp
edit src/NonLinearSolver/LineUpdate/HalvingSearchLineUpdate_impl.h
add test/unit/IO/Discretization/AlgebraicEquationSet_Galerkin_BL_delta_iPDE_iter0.plt

Removed unused variable and changed abs ->, fabs

by cwomack

edit src/pde/AnalyticFunction/ScalarFunction1D.h
edit test/sandbox/Adapt2D_DGBR2_AD_Burgers_ST_toy.cpp

Fix parallel HField calculations. Fix couchmanMatrix for RANS. Cleanup Homotopy. Add the abilty to only get possessed DOF even for Statically Condensed systems.

by galbramc

edit src/Discretization/Block/AlgebraicEquationSet_Block2x2_impl.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_Stabilized.h
edit src/Discretization/DG/AlgebraicEquationSet_DGAdvective_impl.h
edit src/Discretization/Block/AlgebraicEquationSet_Block4x4.h
edit test/sandbox/Solve2D_CG_NACA_IPTF_toy.cpp
edit src/Field/Field_NodalView_Volume.cpp
edit src/Discretization/Block/AlgebraicEquationSet_Block2x2.h
edit src/Field/HField/HField_CG/HField_CG_impl.h
edit test/unit/Field/GenHField_CG_btest.cpp
edit src/Discretization/Galerkin/ResidualParamSensitvity_Galerkin_Stabilized.h
edit src/Discretization/VMSDBR2/AlgebraicEquationSet_Local_VMSD_BR2.h
edit src/Discretization/Potential_Adjoint/AlgebraicEquationSet_CG_Potential_Virtual.h
edit src/SolutionTrek/Continuation/PseudoTime/AlgebraicEquationSet_PTC_VMSD.h
edit test/unit/pde/NS/PDEEuler3D_btest.cpp
edit src/Discretization/HDG/AlgebraicEquationSet_HDG.h
edit src/pde/NS/BCEulermitAVSensor2D.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Local_Galerkin.h
edit src/LinearAlgebra/AlgebraicEquationSetBase_GloballyConstrained.h
edit test/unit/NonLinearSolver/ScalarGoldenSearchLineUpdate_btest.cpp
edit test/sandbox/Solve2D_CG_NACA_LIP_toy.cpp
edit src/UserInterfaces/BodyForceSolver_impl.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_HubTrace_Galerkin_cutCellTransitionIBL.h
edit src/Discretization/FV_TPFA/AlgebraicEquationSet_FV_TPFA.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_Stabilized_LiftedBoundary.h
edit src/Discretization/DG/AlgebraicEquationSet_Local_DG.h
edit test/sandbox/Solve2D_CG_NACA_IPTF_linearsolve_toy.cpp
edit src/Discretization/Block/AlgebraicEquationSet_Block3x3_impl.h
edit src/Discretization/HDG/AlgebraicEquationSet_HDG_impl.h
edit src/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_CutcellTransitionIBL.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Local_Galerkin_Stabilized_LiftedBoundary.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Project.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_BCDataField.h
edit src/Adaptation/MOESS/SolverInterface_VMSD_BR2.h
edit src/Discretization/DG/AlgebraicEquationSet_DGBR2.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Galerkin.h
edit test/sandbox/Solve2D_CG_NACABTE_IPTF_toy.cpp
edit test/unit/SolutionTrek/Continuation/PDEHomotopy_btest.cpp
edit test/unit/NonLinearSolver/HalvingSearchLineUpdate_btest.cpp
edit src/Discretization/HDG/AlgebraicEquationSet_Hubtrace_HDGAdvective_CutcellTransitionIBL.h
edit src/PanelMethod/XfoilPanelEquationSet.h
edit test/unit/SolutionTrek/Continuation/Homotopy_Euler_btest.cpp
edit src/Discretization/Potential_Adjoint/AlgebraicEquationSet_CG_Potential_Adjoint.h
edit test/unit/pde/NS/PDEEuler2D_btest.cpp
edit src/Field/ProjectSoln/Project_DG_to_CG/Project_DG_to_CG_impl.h
edit test/unit/Discretization/VMSDBR2/ProjectL2_VMSD_BR2_Source_btest.cpp
edit test/system/CodeConsistency/AlgebraicEquationSet_PTC_VMSD_Triangle_SA_btest.cpp
edit src/pde/ArtificialViscosity/PDEmitAVSensor2D.h
edit test/unit/NonLinearSolver/NewtonSolver_btest.cpp
edit src/Discretization/DG/AlgebraicEquationSet_DGAdvective.h
edit test/sandbox/Solve3D_CG_LIP_KuttaHACK_toy.cpp
edit src/SolutionTrek/Continuation/PseudoTime/AlgebraicEquationSet_PTC.h
edit src/Field/HField/HField_DG/HField_DG_impl.h
edit src/Discretization/DG/AlgebraicEquationSet_Local_DG_impl.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Local_Project.h
edit src/Field/Field_NodalView_Area.cpp
edit src/Discretization/VMSD/AlgebraicEquationSet_VMSD.h
edit src/Discretization/DG/AlgebraicEquationSet_TransitionIBL.h
edit src/SolutionTrek/Continuation/Homotopy/AlgebraicEquationSet_HTC.h
edit test/unit/pde/NS/PDERANSSA2D_btest.cpp
edit test/unit/Field/HField_CG_btest.cpp
edit src/Discretization/HDG/AlgebraicEquationSet_HDGAdvective.h
edit test/unit/pde/NS/PDERANSSA3D_btest.cpp
edit src/Field/DistanceFunction/DistanceFunction.cpp
edit src/Discretization/DG/AlgebraicEquationSet_DGBR2_impl.h
edit test/unit/Field/HField_DG_btest.cpp
edit src/SolutionTrek/Continuation/Homotopy/PDEHomotopy.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Local_Galerkin_Stabilized.h
edit src/SolutionTrek/Continuation/Homotopy/PDESourceOnly.h
edit src/Discretization/VMSDBR2/AlgebraicEquationSet_VMSD_BR2.h
edit src/Field/output_Tecplot_PDE.h
edit src/SolutionTrek/Continuation/Continuation.cpp
edit src/Discretization/Galerkin/AlgebraicEquationSet_HubTrace_Galerkin.h
edit src/Discretization/HDG/AlgebraicEquationSet_Hubtrace_HDGAdvective.h
edit src/SolutionTrek/Continuation/Homotopy/Homotopy.cpp
edit src/SolutionTrek/TimeMarching/AlgebraicEquationSet_TimeMarch.h
edit src/Field/Field_NodalView_Line.cpp
edit src/LinearAlgebra/AlgebraicEquationSetBase.h
edit src/SolutionTrek/Continuation/DissipationBased/AlgebraicEquationSet_DBC.h
edit src/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_impl.h
edit src/Field/Field_NodalView_Spacetime.cpp
edit test/unit/LinearAlgebra/Advection1D_btest.h
edit src/Discretization/Block/AlgebraicEquationSet_Block4x4_impl.h
edit src/pde/IBL/AlgebraicEquationSet_ProjectToQauxv_3D.h
edit test/unit/Field/GenHField_DG_btest.cpp
edit src/SolutionTrek/Continuation/Homotopy/Homotopy.h
edit src/SolutionTrek/HarmonicBalance/AlgebraicEquationSet_HarmonicBalance.h
edit src/Discretization/Potential_Drela/AlgebraicEquationSet_CG_Potential_Drela.h
edit src/Discretization/Block/AlgebraicEquationSet_Block3x3.h
edit src/Discretization/HDG/AlgebraicEquationSet_Local_HDG.h
edit src/SolutionTrek/TimeMarching/AlgebraicEquationSet_TimeStep.h
edit test/unit/LinearAlgebra/CustomJacobianEqSet_btest.h
edit src/Discretization/VMSDBR2/ResidualCell_VMSD_BR2.h
edit src/Discretization/VMSD/AlgebraicEquationSet_Local_VMSD.h
edit src/pde/NS/PDERANSSA3D.h
edit test/unit/SolutionTrek/Continuation/Homotopy_btest.cpp
edit src/pde/NS/PDERANSSA2D.h
edit src/SolutionTrek/Continuation/ImplicitResidualSmoothing/AlgebraicEquationSet_IRS.h
edit test/unit/LinearAlgebra/Heat1D_btest.h

Fix compile errors

by galbramc

edit src/Field/output_Tecplot_PDE.h
edit test/sandbox/Solve2D_VMSDBR2_HOW5_VI2_AV_HTC_toy.cpp
edit src/SolutionTrek/Continuation/Homotopy/Homotopy.h

Added updated VMSDBR2 projection. Default is off. To turn on define USE_FULLSPACE_PRJECTION_METHOD_2 at the top of your sandbox case.

by blsc

edit src/Discretization/VMSDBR2/SolutionData_VMSD_BR2.h

sansBOOM PDE, BC, Output implementation for DGBR2 with advection and diffusion terms

by darmofal

edit src/LinearAlgebra/DenseLinAlg/DynamicSize/MatrixD_Decompose_LUP_MatrixD_Instantiate.cpp
add test/unit/pde/sansBOOM/BCsansBOOM_btest.cpp
edit src/LinearAlgebra/DenseLinAlg/StaticSize/MatMul/MatrixS_MatMul_Native_MatrixS_Instantiate.cpp
edit src/pde/sansBOOM/PDEsansBOOM.h
edit src/pde/sansBOOM/BCsansBOOM.cpp
edit src/pde/sansBOOM/BCsansBOOM.h
edit src/ErrorEstimate/CMakeLists.txt
edit src/Field/FieldData/FieldDataInvMassMatrix_Cell.cpp
add test/unit/pde/sansBOOM/OutputsansBOOM_btest.cpp
edit src/LinearAlgebra/DenseLinAlg/DynamicSize/MatrixD_Decompose_LU_MatrixS_Instantiate.cpp
edit src/LinearAlgebra/DenseLinAlg/DynamicSize/MatrixD_InverseLU_MatrixS_Instantiate.cpp
edit src/LinearAlgebra/DenseLinAlg/DynamicSize/MatrixD_InverseLUP_MatrixD_Instantiate.cpp
edit src/Field/FieldArea_CG_Cell_Instantiate_2D.cpp
edit src/NonLinearSolver/NewtonSolver_MatrixD_CRS_MatrixS_Instantiate.cpp
edit src/Field/ProjectSoln/ProjectGlobalField/ProjectGlobalField2D.cpp
edit src/LinearAlgebra/DenseLinAlg/DynamicSize/MatMul/MatMul_Native_Real.cpp
edit src/Discretization/CMakeLists.txt
edit src/pde/sansBOOM/Traits_sansBOOM.h
add src/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_sansBOOM.cpp
add src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_sansBOOM.cpp
edit src/Field/output_Tecplot/output_Tecplot_FieldArea.cpp
edit src/LinearAlgebra/DenseLinAlg/DynamicSize/MatrixD_InverseLU_MatrixD_Instantiate.cpp
edit src/pde/sansBOOM/CMakeLists.txt
edit test/sandbox/Adapt2D_DGBR2_sansBOOM_toy.cpp
edit src/LinearAlgebra/SparseLinAlg/ScalarMatrix_CRS_int.cpp
edit test/unit/pde/sansBOOM/CMakeLists.txt
edit src/NonLinearSolver/LineUpdate/HalvingSearchLineUpdate_MatrixD_CRS_MatrixS_Instantiate.cpp
edit src/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_MatrixD_CRS_MatrixS_Instantiate.cpp
edit src/pde/sansBOOM/AtmosphereStandard.h
edit src/LinearAlgebra/DenseLinAlg/DynamicSize/MatMul/MatMul_Native_MatrixS_Instantiate.cpp
edit CMakeLists.txt
edit src/Field/ProjectSoln/PointwiseSolutionStorage.cpp
edit test/unit/pde/sansBOOM/PDEsansBOOM_btest.cpp
edit src/pde/NDConvert/BCNDConvertSpaceTime1D.h
edit src/pde/sansBOOM/OutputsansBOOM.h

Adding two generalized cases to the sandbox to deal with gaps in avro use and SA RANS for adiabatic and isothermal flows. Will be good to keep these consistent with future homotopy and RANS changes

by waligura

add test/sandbox/Adapt2D_VMSDBR2_RANSSA_Subsonic_IsoFlatPlate_toy.cpp
add test/sandbox/Adapt2D_VMSDBR2_RANSSA_Supersonic_AV_HTC_toy.cpp

Removing flatplate xfld mesh option

by waligura

edit test/sandbox/Adapt2D_VMSDBR2_RANSSA_Subsonic_IsoFlatPlate_toy.cpp

removing xfield definition in supersonic case too

by waligura

edit test/sandbox/Adapt2D_VMSDBR2_RANSSA_Supersonic_AV_HTC_toy.cpp

Fixed some missing instantiations needed for sansBOOM

by darmofal

edit src/LinearAlgebra/DenseLinAlg/StaticSize/MatMul/MatrixS_MatMul_Native_MatrixS_Instantiate.cpp
edit src/LinearAlgebra/DenseLinAlg/StaticSize/MatrixS_InverseLU_Real_Instantiate.cpp
edit src/pde/sansBOOM/PDEsansBOOM.h
edit src/LinearAlgebra/DenseLinAlg/StaticSize/MatrixS_Decompose_LU_Real_Instantiate.cpp

A couple more instantiations added... this time because the intel compiler was complaining (though the other compilers were fine... ARGH)

by darmofal

edit src/LinearAlgebra/DenseLinAlg/DynamicSize/MatMul/MatMul_Native_MatrixS_Instantiate.cpp

Adjusting slightly tolerance on unit tests

by darmofal

edit test/unit/pde/sansBOOM/OutputsansBOOM_btest.cpp
edit test/unit/pde/sansBOOM/PDEsansBOOM_btest.cpp
edit test/unit/pde/sansBOOM/BCsansBOOM_btest.cpp

Updates to BDF time marching to allow ramping of integration order to provide the needed order-dependent past data

by deanna.sewell

add SANS/SANS.xcodeproj/project.xcworkspace/xcshareddata/IDEWorkspaceChecks.plist
add .idea/.gitignore
edit .gitignore
add .idea/misc.xml
add SANS/SANS.xcodeproj/project.pbxproj
add .idea/modules.xml
add SANS/SANS.xcodeproj/project.xcworkspace/contents.xcworkspacedata
add .idea/vcs.xml
add config
add .idea/SANS.iml

further merge conflicts

by allmaras

edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_sansBOOM.cpp
edit test/sandbox/Adapt2D_DGBR2_sansBOOM_toy.cpp
edit test/sandbox/Adapt2D_VMSDBR2_RANSSA_Supersonic_AV_HTC_toy.cpp
edit src/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_sansBOOM.cpp
edit test/sandbox/Adapt2D_VMSDBR2_RANSSA_Subsonic_IsoFlatPlate_toy.cpp

mat-mul instantiations needed for sansBOOM

by allmaras

edit src/LinearAlgebra/DenseLinAlg/StaticSize/MatMul/MatrixS_MatMul_Native_Surreal_Instantiate.cpp
edit src/LinearAlgebra/DenseLinAlg/StaticSize/MatMul/MatrixS_MatMul_Native_MatrixS_Instantiate.cpp

Modified line search test and removed residual dat file

by cwomack

edit test/unit/NonLinearSolver/HalvingSearchLineUpdate_btest.cpp
delete test/unit/IO/NonLinearSolver/linesearch_residuals.dat

Cleanup BCmitAVsensor

by galbramc

edit test/sandbox/Adapt2D_DGBR2_HOW5_CI1_toy.cpp
edit test/system/CodeConsistency/BCEulermitAVSensor3D_Consistency_RANSSA_btest.cpp
edit src/pde/ArtificialViscosity/AVSensor_ViscousFlux2D.h
edit test/sandbox/Solve1D_DGBR2_Line_Euler_ShuOsher_AV_ST_toy.cpp
edit test/sandbox/Solve2D_DGBR2_Quad_Euler_ForwardFacingStep_AV_BDF_toy.cpp
edit src/pde/NS/BCEulermitAVSensor1D.h
edit test/sandbox/Solve2D_DGBR2_Triangle_Euler_NACA0012_ArtificialViscosity_toy.cpp
edit test/sandbox/Solve2D_DGBR2_Euler_ForwardStep_AV_ST_toy.cpp
edit src/Field/NormalField/NormalField_Volume.cpp
edit test/sandbox/Solve2D_DGBR2_HOW5_CI1_toy.cpp
edit test/sandbox/Solve2D_DGBR2_Triangle_Euler_RAE2822_ArtificialViscosity_toy.cpp
edit src/LinearAlgebra/AlgebraicEquationSetBase_GloballyConstrained.h
edit test/sandbox/Solve2D_VMSDBR2_Euler_RadialShock_Corrected_AV_HTC_toy.cpp
edit test/sandbox/Adapt2D_CGStabilized_HOW5_CI1_ArtificialViscosity_toy.cpp
edit src/pde/ArtificialViscosity/PDEmitAVSensor2D.h
edit src/SolutionTrek/Continuation/Homotopy/Homotopy.h
edit test/sandbox/Adapt3D_DGBR2_RANSSA_CRM_toy.cpp
edit test/system/CodeConsistency/CMakeLists.txt
edit src/pde/ArtificialViscosity/AVSensor_ViscousFlux3D.h
edit test/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cpp
edit test/sandbox/Solve1D_DGBR2_Line_Euler_Lax_AV_ST_toy.cpp
edit test/sandbox/Solve2D_DGBR2_Euler_Riemann_AV_RK_toy.cpp
edit test/unit/pde/NS/BCEulermitAVSensor2D_btest.cpp
edit src/pde/NS/BCEuler2D_mitState.h
edit src/pde/NS/PDEmitAVDiffusionOuter2D.h
edit test/sandbox/Solve1D_DGBR2_Line_Euler_ArtNozzle_AV_Steady_toy.cpp
edit test/sandbox/Solve2D_CGStabilized_HOW5_CI1_toy.cpp
edit test/sandbox/Adapt3D_DGBR2_RANSSA_ArtificialViscosity_ONERA_M6_toy.cpp
edit test/sandbox/Solve3D_DGBR2_RANSSA_CRM_toy.cpp
edit test/unit/pde/NS/BCEulermitAVSensor3D_btest.cpp
edit test/unit/pde/NS/BCEulermitAVSensor1D_btest.cpp
edit test/sandbox/Solve2D_VMSDBR2_HOW5_VI2_Surface_AV_HTC_toy.cpp
edit test/sandbox/Adapt2D_VMSDBR2_NavierStokes_Blottner_Mach20_AV_HTC_toy.cpp
edit test/sandbox/Adapt2D_VMSDBR2_NavierStokes_LaminarJoukowski_AV_HTC_P1_2k_toy.cpp
edit test/system/CodeConsistency/BCEulermitAVSensor2D_Consistency_btest.cpp
edit test/sandbox/Solve1D_DGBR2_Line_Euler_ArtNozzle_AV_BDF_toy.cpp
edit test/sandbox/Solve2D_DGBR2_Triangle_Euler_Ramp_ArtificialViscosity_toy.cpp
edit test/unit/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_Stabilized_Triangle_SA_btest.cpp
edit test/sandbox/Solve2D_VMSDBR2_RANSSA_Joukowski_HTC_toy.cpp
edit test/sandbox/Solve2D_VMSD_HOW5_CI1_toy.cpp
edit src/UserInterfaces/BodyForceSolver_impl.h
edit src/Field/NormalField/DeltaRef/DeltaRefStorage.cpp
edit test/sandbox/Solve2D_VMSDBR2_HOW5_VI2_AV_HTC_toy.cpp
edit test/sandbox/Solve3D_CGStabilized_Euler_Bump_ArtificialViscosity_toy.cpp
edit test/sandbox/Solve2D_VMSDBR2_Euler_RadialShock_AV_HTC_toy.cpp
edit test/system/CodeConsistency/BCEulermitAVSensor3D_Consistency_btest.cpp
edit src/Field/NormalField/DeltaRef/DeltaRefTable.h
edit src/Field/NormalField/DeltaRef/ProjectDeltaRef.cpp
edit test/system/LocalSolve/Constrained_Solve_btest.cpp
edit test/sandbox/Solve1D_DGBR2_Line_Euler_ArtNozzle_AV_ST_toy.cpp
edit src/pde/ArtificialViscosity/PDEmitAVSensor3D.h
edit test/sandbox/Solve1D_DGBR2_Line_Euler_Nozzle_ArtificialViscosity_toy.cpp
edit test/sandbox/Solve3D_VMSDBR2_BlottnerSphere_AV_HTC_toy.cpp
edit src/pde/NS/BCEulermitAVSensor2D.h
edit src/pde/NS/BCEuler1D_mitState.h
edit src/LinearAlgebra/DenseLinAlg/StaticSize/MatMul/MatrixS_MatMul_Native_MatrixS_Instantiate.cpp
edit test/sandbox/Adapt3D_CGStabilized_RANSSA_ArtificialViscosity_ONERA_M6_toy.cpp
edit test/sandbox/Solve3D_CGStabilized_RANSSA_OneraM6_Subsonic_ArtificialViscosity_toy.cpp
edit test/unit/SolutionTrek/Continuation/Homotopy_Euler_btest.cpp
edit test/sandbox/Solve3D_CGStabilized_RANSSA_OneraM6_ArtificialViscosity_toy.cpp
edit src/LinearAlgebra/DenseLinAlg/StaticSize/MatMul/MatrixS_MatMul_Native_Surreal_Instantiate.cpp
edit test/sandbox/Adapt3D_VMSDBR2_RANSSA_DPW_AV_HTC_toy.cpp
edit src/pde/NS/BCEuler1D_mitState_ST.h
edit test/sandbox/Adapt2D_DGBR2_Euler_ArtNozzle_AV_ST_toy.cpp
edit src/Field/NormalField/DeltaRef/DeltaRefTable.cpp
edit src/pde/NS/BCEulermitAVSensor3D.h
edit test/sandbox/Adapt2D_VMSDBR2_NavierStokes_LaminarJoukowski_AV_HTC_toy.cpp
edit test/sandbox/Solve2D_CGStabilized_Triangle_Euler_NACA0012_ArtificialViscosity_toy.cpp
edit src/pde/ArtificialViscosity/PDEmitAVSensor1D.h
edit test/sandbox/Adapt2D_VMSDBR2_RANSSA_Supersonic_AV_HTC_toy.cpp
edit src/pde/ArtificialViscosity/AVSensor_ViscousFlux1D.h
edit test/system/CodeConsistency/BCEulermitAVSensor2D_Consistency_RANSSA_btest.cpp

Forgot new files

by galbramc

add src/pde/ArtificialViscosity/BCmitAVSensor1D.h
add src/pde/ArtificialViscosity/BCmitAVSensor2D.h
add src/pde/ArtificialViscosity/BCmitAVSensor3D.h

Allow Homotopy to use pre-defined BCVectors

by galbramc

edit test/sandbox/Solve3D_VMSDBR2_BlottnerSphere_AV_HTC_toy.cpp
edit test/sandbox/Adapt2D_VMSDBR2_NavierStokes_Blottner_Mach20_AV_HTC_toy.cpp
edit test/sandbox/Adapt2D_VMSDBR2_NavierStokes_LaminarJoukowski_AV_HTC_P1_2k_toy.cpp
edit test/sandbox/Solve2D_VMSDBR2_RANSSA_Joukowski_HTC_toy.cpp
edit test/unit/SolutionTrek/Continuation/Homotopy_btest.cpp
edit test/sandbox/Adapt2D_VMSDBR2_RANSSA_Supersonic_AV_HTC_toy.cpp
edit test/unit/SolutionTrek/Continuation/Homotopy_Euler_btest.cpp
edit test/system/LocalSolve/Constrained_Solve_btest.cpp
edit test/sandbox/Solve2D_VMSDBR2_Euler_RadialShock_Corrected_AV_HTC_toy.cpp
edit test/unit/pde/NS/BCEulermitAVSensor2D_btest.cpp
edit src/pde/NS/BCEulermitAVSensor2D.h
edit test/sandbox/Solve2D_VMSDBR2_Euler_RadialShock_AV_HTC_toy.cpp
edit src/SolutionTrek/Continuation/Homotopy/BCHomotopy.h
edit test/sandbox/Adapt3D_VMSDBR2_RANSSA_DPW_AV_HTC_toy.cpp
edit test/sandbox/Adapt2D_VMSDBR2_NavierStokes_LaminarJoukowski_AV_HTC_toy.cpp
edit test/unit/SolutionTrek/Continuation/DissipationBased_btest.cpp
edit test/sandbox/Solve2D_VMSDBR2_HOW5_VI2_Surface_AV_HTC_toy.cpp
edit test/sandbox/Solve2D_VMSDBR2_HOW5_VI2_AV_HTC_toy.cpp

Make AVSensor_Source_VMSD_SPD consistent between 2D and 3D

by galbramc

edit src/pde/ArtificialViscosity/AVSensor_Source2D.h
edit src/pde/ArtificialViscosity/AVSensor_Source3D.h

Fix compile errors

by galbramc

edit test/sandbox/Solve2D_DGBR2_HOW5_CI1_toy.cpp
edit test/sandbox/Solve2D_DGBR2_Quad_Euler_ForwardFacingStep_AV_BDF_toy.cpp
edit test/sandbox/Solve2D_VMSD_HOW5_CI1_toy.cpp
edit test/sandbox/Solve2D_CGStabilized_HOW5_CI1_toy.cpp
edit test/sandbox/Solve2D_DGBR2_Triangle_Euler_Ramp_ArtificialViscosity_toy.cpp
edit test/sandbox/Solve2D_DGBR2_Euler_Riemann_AV_RK_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_HOW5_CI1_toy.cpp
edit test/sandbox/Solve2D_DGBR2_Euler_ForwardStep_AV_ST_toy.cpp
edit test/sandbox/Adapt2D_CGStabilized_HOW5_CI1_ArtificialViscosity_toy.cpp

vera fix

by galbramc

edit test/sandbox/Solve2D_DGBR2_Euler_Riemann_AV_RK_toy.cpp

Fix test for parallel

by galbramc

edit test/system/CodeConsistency/Curvilinear2D_VMSD_AD_btest.cpp

Cleanup file dump

by galbramc

edit test/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cpp

Use Metric to compute HField_DG instead of size/perimiter

by galbramc

edit src/pde/ArtificialViscosity/PDEmitAVSensor1D.h
edit src/Field/HField/GenHField_DG/GenHField_DG_impl.h
edit test/unit/Field/HField_DG_btest.cpp
edit src/Field/HField/HField_DG/HField_DG_impl.h
edit src/pde/ArtificialViscosity/PDEmitAVSensor2D.h
edit src/pde/ArtificialViscosity/PDEmitAVSensor3D.h

Add ResidualNorm_InvJac_DOF_Weighted to VMSDBR2

by galbramc

edit src/Discretization/VMSDBR2/AlgebraicEquationSet_Local_VMSD_BR2.h
edit test/sandbox/Adapt3D_VMSDBR2_RANSSA_DPW_AV_HTC_toy.cpp
edit src/Discretization/VMSDBR2/AlgebraicEquationSet_VMSD_BR2.h

Revert last change

by galbramc

edit test/sandbox/Adapt3D_VMSDBR2_RANSSA_DPW_AV_HTC_toy.cpp
edit src/Discretization/Galerkin/AlgebraicEquationSet_Local_Galerkin.h
edit src/Discretization/VMSD/AlgebraicEquationSet_Local_VMSD.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Local_Project.h
edit src/Discretization/VMSDBR2/AlgebraicEquationSet_Local_VMSD_BR2.h
edit src/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_CutcellTransitionIBL.h
edit src/Discretization/VMSDBR2/AlgebraicEquationSet_VMSD_BR2.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Local_Galerkin_Stabilized.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Local_Galerkin_Stabilized_LiftedBoundary.h

Fix compile error, and more verbose assertion

by galbramc

edit src/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_CutcellTransitionIBL.h
edit src/Field/FieldAssociativity.h

Update unit tests

by galbramc

edit test/unit/SolutionTrek/Continuation/PseudoTime_btest.cpp
edit test/unit/SolutionTrek/Continuation/ImplicitResidualSmoothing_btest.cpp

Another unit test update

by galbramc

edit test/unit/Field/HField_CG_btest.cpp

Add ImpliedMetric for Line 2D element.

by galbramc

edit src/Field/Element/ElementXFieldLine_Instantiate_2D.cpp
edit src/Field/CMakeLists.txt
edit test/unit/Field/Element/ElementXFieldLine_1D_btest.cpp
edit src/Field/HField/HField_DG/HField_DG_Spacetime.cpp
edit src/Field/HField/HField_DG/HField_DG_impl.h
edit test/unit/Field/Element/ElementXFieldLine_2D_btest.cpp
edit src/Field/HField/HField_DG/HField_DG_Volume.cpp

Fix unit test

by galbramc

edit test/unit/Field/Element/ElementXFieldLine_2D_btest.cpp

Use SANS_CHECK_CLOSE

by galbramc

edit test/unit/Field/Element/ElementXFieldLine_2D_btest.cpp

Remove Burgers PDE

by galbramc

delete test/sandbox/Solve1D_DGBR2_Burgers_ArtificialViscosity_toy.cpp
delete test/unit/pde/Burgers/PDEBurgers1D_btest.cpp
delete src/Discretization/DG/DGAdvective_Instantiate/AlgebraicEquationSet_DGAdvective_Burgers1D_Conservative_DNSN.cpp
delete test/unit/IO/pde/PDEBurgers_ArtificialViscosity1D_pattern.txt
edit src/Discretization/CMakeLists.txt
delete src/pde/Burgers/BurgersConservative1D.cpp
edit test/system/Asymptotic/CMakeLists.txt
delete test/unit/IO/pde/PDEBurgers2D_pattern.txt
delete test/unit/pde/Burgers/PDEBurgers_ArtificialViscosity1D_btest.cpp
delete test/sandbox/Adapt3D_DGBR2_Burgers_ST_toy.cpp
delete test/system/Asymptotic/ErrorOrder_1D_DGBR2_Burgers_btest.cpp
delete src/pde/Burgers/PDEBurgers_ArtificialViscosity1D.h
delete src/pde/Burgers/BCmitAVSensorBurgers2D.h
delete src/pde/Burgers/PDEBurgers2D.cpp
delete test/unit/Discretization/DG/JacobianCell_DGBR2_Param_Burgers_btest.cpp
delete src/pde/Burgers/BCBurgers2D.cpp
delete test/system/IO/ErrorOrder/ErrorOrder_1D_HDG_Burgers_FullTest.txt
delete test/unit/IO/pde/PDEBurgers1D_pattern.txt
delete src/pde/Burgers/CMakeLists.txt
delete src/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_Burgers_AV1D_DUSUG.cpp
delete src/pde/Burgers/BCBurgers2D.h
delete src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Burgers1D_Conservative_DUSN.cpp
delete src/pde/Burgers/PDEBurgers_fwd.h
delete src/pde/Burgers/PDEBurgers1D.cpp
delete src/pde/Burgers/PDEBurgers2D.h
delete src/Discretization/HDG/Instantiate/AlgebraicEquationSet_HDG_Burgers1D_Conservative_DUSU.cpp
delete src/pde/Burgers/BurgersConservative2D.h
delete src/pde/Burgers/Burgers_ArtificialViscosity_fwd.h
delete test/sandbox/Adapt2D_DGBR2_Burgers_ST_toy.cpp
delete test/system/Asymptotic/ErrorOrder_1D_HDG_Burgers_btest.cpp
delete src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Burgers1D_Conservative_DUSU.cpp
delete test/unit/pde/Burgers/BCBurgers2D_btest.cpp
delete src/pde/Burgers/BCmitAVSensorBurgers2D.cpp
delete test/system/IO/ErrorOrder/ErrorOrder_1D_DGBR2_Burgers_MinTest.txt
delete test/unit/IO/pde/PDEBurgers_ArtificialViscosity2D_pattern.txt
delete test/unit/Discretization/DG/JacobianInteriorTrace_DGBR2_Param_Burgers_btest.cpp
delete test/unit/pde/Burgers/PDEBurgers2D_btest.cpp
delete test/sandbox/Adapt2D_DGBR2_Burgers_ArtificialViscosity_ST_toy.cpp
delete src/pde/Burgers/BCBurgers1D.cpp
delete src/pde/Burgers/BCmitAVSensorBurgers1D.cpp
delete test/sandbox/Solve1D_VMSDBR2_Burgers_toy.cpp
delete test/sandbox/Solve1D_DGBR2_Burgers_toy.cpp
delete test/system/IO/ErrorOrder/ErrorOrder_1D_HDG_Burgers_MinTest.txt
edit test/sandbox/CMakeLists.txt
delete test/unit/pde/Burgers/CMakeLists.txt
delete src/pde/Burgers/BurgersConservative2D.cpp
delete src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Burgers_AV1D_DUSUG.cpp
edit src/pde/CMakeLists.txt
delete src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_Burgers2D_Conservative_DUSN.cpp
delete src/pde/Burgers/BurgersConservative1D.h
delete test/sandbox/Adapt3D_DGBR2_Burgers_ArtificialViscosity_ST_toy.cpp
delete test/unit/pde/Burgers/BCBurgers1D_btest.cpp
edit CMakeLists.txt
delete src/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_Burgers_AV2D_DUSN.cpp
delete src/pde/Burgers/PDEBurgers_ArtificialViscosity2D.h
edit src/ErrorEstimate/CMakeLists.txt
delete src/pde/Burgers/BCmitAVSensorBurgers1D.h
edit test/unit/pde/CMakeLists.txt
delete test/system/IO/ErrorOrder/ErrorOrder_1D_DGBR2_Burgers_FullTest.txt
delete test/unit/pde/Burgers/PDEBurgers_ArtificialViscosity2D_btest.cpp
delete src/pde/Burgers/PDEBurgers1D.h
delete src/pde/Burgers/BCBurgers1D.h
delete src/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_Burgers1D_Conservative_DUSN.cpp
edit test/system/BlockSolve/CMakeLists.txt
delete src/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_Burgers2D_Conservative_DUSN.cpp

SUPG/GLS/VMS tau code clean-up, added unit tests for P2 and P3

by allmaras

edit test/unit/Discretization/Galerkin/StabilizationMatrix_NS_btest.cpp
edit src/Discretization/Galerkin/Stabilization_Galerkin.h

Add dict function to DictKeyPair

by galbramc

edit src/Python/PyDict.h

Added Axisymmetric DBL scalar function in 2D with unit tests

by cwomack

edit src/pde/AnalyticFunction/ScalarFunction2D.cpp
edit test/unit/pde/AnalyticFunction/ScalarFunction2D_btest.cpp
edit test/unit/IO/pde/ScalarFunction2D_pattern.txt
edit src/pde/AnalyticFunction/ScalarFunction2D.h

Added vera exclusion for ScalarFunction2D

by cwomack

edit scripts/vera/exclusions.txt

Updates to sansBOOM including improved IC implementation including ability to read nearfield from a file and also more unit tests

by darmofal

edit src/pde/sansBOOM/BCsansBOOM.cpp
add src/pde/sansBOOM/ICsansBOOM.cpp
edit src/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_sansBOOM.cpp
edit test/sandbox/Adapt2D_DGBR2_sansBOOM_toy.cpp
edit test/unit/pde/sansBOOM/PDEsansBOOM_btest.cpp
add src/pde/sansBOOM/ICsansBOOM.h
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_sansBOOM.cpp
edit src/pde/sansBOOM/Traits_sansBOOM.h
add test/unit/pde/sansBOOM/ICsansBOOM_btest.cpp
edit src/pde/sansBOOM/OutputsansBOOM.h
edit src/pde/sansBOOM/CMakeLists.txt
edit src/pde/sansBOOM/PDEsansBOOM.h
edit test/unit/pde/sansBOOM/BCsansBOOM_btest.cpp
edit src/LinearAlgebra/DenseLinAlg/DynamicSize/MatMul/MatMul_Native_MatrixS_Instantiate.cpp
edit test/unit/pde/sansBOOM/OutputsansBOOM_btest.cpp
edit src/pde/sansBOOM/BCsansBOOM.h

Compressible mechanical power calculation

by galbramc

edit src/pde/NS/OutputEuler3D.h
edit src/UserInterfaces/BodyForceSolver_impl.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.h

Missing a newline at end of ICsansBOOM.cpp. , Fixed.

by darmofal

edit src/pde/sansBOOM/ICsansBOOM.cpp

Added Axisymmetric flux functions + unit tests

by cwomack

edit src/pde/AdvectionDiffusion/AdvectiveFlux2D.h
edit src/pde/AdvectionDiffusion/ViscousFlux2D.cpp
edit test/unit/IO/pde/PDEAdvectionDiffusion2D_AdvectiveFlux2D_pattern.txt
edit src/pde/AdvectionDiffusion/BCAdvectionDiffusion2D.cpp
edit test/unit/pde/AdvectionDiffusion/ViscousFlux2D_btest.cpp
edit test/unit/IO/pde/PDEAdvectionDiffusion2D_ViscousFlux2D_pattern.txt
edit test/unit/pde/AdvectionDiffusion/AdvectiveFlux2D_btest.cpp
edit src/pde/AdvectionDiffusion/ViscousFlux2D.h

Missing a return statement

by darmofal

edit src/pde/sansBOOM/BCsansBOOM.h

Found sign error in upwind flux in sansBOOM.

by darmofal

edit src/pde/sansBOOM/PDEsansBOOM.h
edit test/sandbox/Adapt2D_DGBR2_sansBOOM_toy.cpp

Fix compile error and warnings from new clang on macOS

by galbramc

edit src/Discretization/Galerkin/JacobianFunctionalBoundaryTrace_WeightedResidual_Galerkin.h
edit test/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cpp

Relax tolerance

by galbramc

edit test/unit/Field/Project_DG_to_CG_btest.cpp

Another warning fix

by galbramc

edit src/Discretization/Galerkin/JacobianFunctionalBoundaryTrace_Galerkin.h

A few more warning fixes

by galbramc

edit src/Discretization/DG/JacobianCell_DGBR2_Param.h
edit src/Discretization/Galerkin/JacobianFunctionalInteriorTrace_Galerkin.h

More warning fixes for new clang

by galbramc

edit test/unit/pde/TCNE/PDETCNEEuler1D_btest.cpp
edit test/unit/pde/TCNE/Q1DTCNEConservative_btest.cpp
edit test/unit/Discretization/Galerkin/AlgebraicEquationSet_Local_Galerkin_Stabilized_Triangle_Euler_btest.cpp
edit src/Discretization/Galerkin/JacobianFunctionalInteriorTrace_Galerkin.h
edit src/Discretization/VMSDBR2/JacobianFunctionalBoundaryTrace_VMSD_BR2.h
edit test/unit/Discretization/DG/AlgebraicEquationSet_Local_DGBR2_Triangle_AD_btest.cpp
edit test/unit/Discretization/HDG/AlgebraicEquationSet_Local_HDG_Triangle_AD_btest.cpp
edit test/unit/Discretization/HDG/AlgebraicEquationSet_Local_HDG_Line_AD_btest.cpp

One more warning fix

by galbramc

edit src/Discretization/VMSD/JacobianFunctionalBoundaryTrace_WeightedResidual_VMSD.h

Remove boost libary from external and add it to gitignore

by galbramc

edit .gitignore

More cleanup

by galbramc

edit .gitignore
delete .idea/vcs.xml
delete .idea/.gitignore
delete .idea/SANS.iml
delete SANS/SANS.xcodeproj/project.xcworkspace/xcshareddata/IDEWorkspaceChecks.plist
delete SANS/SANS.xcodeproj/project.pbxproj
delete .idea/misc.xml
delete config
delete .idea/modules.xml
delete SANS/SANS.xcodeproj/project.xcworkspace/contents.xcworkspacedata

Updates to BDF time marching to allow ramping of integration order to provide the needed order-dependent past data

by deanna.sewell

edit test/unit/SolutionTrek/TimeMarching/BDF_btest.cpp
edit src/SolutionTrek/TimeMarching/BackwardsDifference/BDF.h

modified ODE definition for high-Re version of SA for incompressible RANS

by allmaras

edit src/pde/IncompressibleNS/PDEIncompressibleRANSSA1DChannel.h

Mechanical power correction

by galbramc

edit src/pde/NS/OutputEuler3D.h

Another mechanical power correction

by galbramc

edit src/pde/NS/OutputEuler3D.h

Remove Sensor template from AVSensor_Source3D_PressureGrad

by galbramc

edit src/Field/NormalField/DeltaRef/ProjectDeltaRef.cpp
edit test/unit/pde/ArtificialViscosity/AVSensor_Source3D_Euler_btest.cpp
edit test/sandbox/Adapt2D_VMSDBR2_RANSSA_Supersonic_AV_HTC_toy.cpp
edit src/Meshing/Embedding/MesherInterface_Embedding.cpp
edit test/sandbox/Adapt3D_DGBR2_RANSSA_ArtificialViscosity_ONERA_M6_toy.cpp
edit src/pde/NS/BCEuler3D_Solution.cpp
edit src/Field/NormalField/ProfileLoss/ProfileLoss.cpp
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_ArtificialViscosity_RANSSA3D_PrimitiveSutherland.cpp
edit test/sandbox/Solve3D_CGStabilized_Euler_Bump_ArtificialViscosity_toy.cpp
edit src/ErrorEstimate/DG/Instantiate/ErrorEstimate_DGBR2_ArtificialViscosity_RANSSA3D_PrimitiveSutherland.cpp
edit test/sandbox/Adapt3D_CGStabilized_RANSSA_ArtificialViscosity_ONERA_M6_toy.cpp
edit test/sandbox/Adapt3D_DGBR2_RANSSA_CRM_toy.cpp
edit src/UserInterfaces/BodyForceSolver_PDE.h
edit src/pde/NS/BCEulermitAVSensor3D.cpp
edit test/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cpp
edit src/UserInterfaces/BodyForceSolver_impl.h
edit test/sandbox/Solve3D_CGStabilized_RANSSA_OneraM6_ArtificialViscosity_toy.cpp
edit test/sandbox/Solve3D_CGStabilized_RANSSA_OneraM6_Subsonic_ArtificialViscosity_toy.cpp
edit src/Field/output_Tecplot/output_Tecplot_RotorSource.cpp
edit test/sandbox/Adapt3D_VMSDBR2_RANSSA_DPW_AV_HTC_toy.cpp
edit test/sandbox/Solve3D_DGBR2_RANSSA_CRM_toy.cpp
edit src/pde/ArtificialViscosity/AVSensor_Source3D.h

moved typedef HType to eliminate un-used typedef warning when USE_GRID_LAPLACIAN turned on

by allmaras

edit src/pde/ArtificialViscosity/AVSensor_ViscousFlux2D.h

Fix compile error

by galbramc

edit test/sandbox/Adapt3D_CGStabilized_RANSSA_ArtificialViscosity_ONERA_M6_toy.cpp

Return delta',s for both LE and TE edges for BodyForces

by galbramc

edit src/Field/NormalField/ProfileLoss/ProfileLoss.cpp
edit src/UserInterfaces/BodyForceSolver_impl.h
edit src/Field/NormalField/ProfileLoss/ProfileLoss.h

Add Deviation Angle Square output function for Body Forces

by galbramc

edit src/Discretization/Galerkin/FunctionalCell_Galerkin.h
edit src/UserInterfaces/BodyForceSolver.h
edit test/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cpp
edit src/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.h
edit src/UserInterfaces/BodyForceSolver_impl.h
edit src/Discretization/Galerkin/IntegrandCell_Galerkin_Output.h
edit src/pde/NS/PDEEuler3D_RotorSource.h

Missing include

by galbramc

edit test/sandbox/Adapt2D_Galerkin_Stabilized_AD_DoubleBoundaryLayer_toy.cpp

More compile fixes

by galbramc

edit test/system/Asymptotic/ErrorEstimateOrder_2D_CG_Triangle_RD_btest.cpp
edit test/system/Asymptotic/ErrorEstimateOrder_2D_CG_Triangle_AD_btest.cpp

Fix compile warnings

by galbramc

edit src/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.h

Revert MechanicalPower calculation. Fix InteriorTrace partitioning for JacobianFunctionalInteriorTrace. Fixes for body force optimization.

by galbramc

edit src/Field/Partition/XField_Lagrange_impl.h
edit src/UserInterfaces/BodyForceSolver_impl.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_Stabilized.h
edit test/unit/UnitGrids/XField2D_Box_Triangle_Lagrange_X1.cpp
edit test/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cpp
edit src/Discretization/Galerkin/FunctionalBoundaryTrace_Galerkin.h
edit test/unit/UnitGrids/XField2D_Annulus_Triangle_Lagrange_Xq.cpp
edit src/LinearAlgebra/SparseLinAlg/SparseLinAlg_LinearSolver.cpp
edit src/pde/NS/OutputEuler3D.h
edit test/unit/UnitGrids/XField2D_Box_Triangle_Lagrange_X1_btest.cpp
edit test/unit/Discretization/Galerkin/JacobianFunctionalBoundaryTrace_WeightedResidual_Galerkin_btest.cpp
edit src/Discretization/Galerkin/JacobianFunctionalInteriorTrace_Galerkin.h
edit src/Discretization/Galerkin/FunctionalInteriorTrace_Galerkin.h
edit test/unit/UnitGrids/XField2D_Box_Triangle_Lagrange_X1.h
edit test/unit/UnitGrids/XField2D_Duct_Triangle_Lagrange_Xq.cpp
edit src/Field/Partition/XField_Lagrange_balance_impl.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.h
edit src/Field/Partition/LagrangeElementGroup.cpp
edit test/unit/Discretization/Galerkin/FunctionalBoundaryTrace_Galerkin_btest.cpp

Use consistent limited gradients in PrimitiveSurrogate_btest

by galbramc

edit src/pde/NS/Q1DPrimitiveSurrogate.h
edit test/unit/pde/NS/Q2DPrimitiveSurrogate_btest.cpp
edit src/pde/NS/Q2DPrimitiveSurrogate.h
edit src/pde/NS/Q3DPrimitiveSurrogate.h
edit test/unit/pde/NS/Q3DPrimitiveSurrogate_btest.cpp
edit test/unit/pde/NS/Q1DPrimitiveSurrogate_btest.cpp

Fix warnings

by galbramc

edit test/unit/UnitGrids/XField2D_Duct_Triangle_Lagrange_Xq.cpp
edit test/unit/UnitGrids/XField2D_Annulus_Triangle_Lagrange_Xq.cpp

Verbose output for computing BodyForce gradients

by galbramc

edit src/UserInterfaces/BodyForceSolver_impl.h

Compile fix for using grid laplacian

by galbramc

edit test/unit/Field/HField_DG_btest.cpp
edit test/unit/Field/HField_CG_btest.cpp
edit src/Field/HField/HField_DG/HField_DG_impl.h

Fix PETSc/TAO deprecation warnings

by galbramc

edit src/Adaptation/MOESS/TAO/ImpliedMetric_Optimizer_TAO/ImpliedMetric_Optimizer_TAO_impl.h
edit src/Adaptation/MOESS/TAO/MOESS_SANS_Optimizer_TAO/MOESS_SANS_Optimizer_TAO_impl.h

Update to supersonic test case

by waligura

edit test/sandbox/Adapt2D_VMSDBR2_RANSSA_Supersonic_AV_HTC_toy.cpp

Working supersonic case for develop

by waligura

edit test/sandbox/Adapt2D_VMSDBR2_RANSSA_Supersonic_AV_HTC_toy.cpp

Try again to see if tests time out

by waligura

edit test/sandbox/Adapt2D_VMSDBR2_RANSSA_Supersonic_AV_HTC_toy.cpp

Add CompressiblePower calculation

by galbramc

edit src/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.cpp
edit src/Meshing/EGADS/RotorSource/QuadCamber.cpp
edit src/pde/NS/OutputEuler3D.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.h
edit src/UserInterfaces/BodyForceSolver_impl.h

Additional unit tests for new sensor with RANS. Found and fixed a few bugs in PDERANSSA2D and PDEEuler3D. Cleaned up solver interface for VMSD-BR2 somewhat. More unit tests and tidy up to come.

by blsc

edit src/ErrorEstimate/VMSD/ErrorEstimate_VMSD_BR2.h
add test/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_NavierStokes_Consistency_btest.cpp
edit src/pde/NS/PDEEulermitAVDiffusion3D.h
edit test/sandbox/Adapt3D_VMSDBR2_RANSSA_DPW_AV_HTC_toy.cpp
edit src/pde/NS/PDEmitAVDiffusionOuter2D.h
edit test/unit/pde/NS/PDEEuler3D_btest.cpp
edit src/ErrorEstimate/VMSD/ErrorEstimateBase_VMSD.cpp
add test/system/IO/ErrorOrder/ErrorOrder_2D_VMSDBR2_Triangle_AD_MinTest.txt
edit test/unit/pde/ArtificialViscosity/AVSensor_Source3D_Euler_btest.cpp
edit src/pde/NS/PDEEulermitAVDiffusion2D.h
edit src/pde/NS/PDEEuler3D.h
edit test/sandbox/Solve2D_VMSDBR2_HOW5_VI2_Surface_AV_HTC_toy.cpp
add test/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_Consistency_btest.cpp
add test/system/IO/ErrorOrder/ErrorOrder_2D_VMSDBR2_Triangle_AD_FullTest.txt
edit test/unit/pde/NS/PDERANSSA2D_btest.cpp
edit src/Adaptation/MOESS/SolverInterface_VMSD_BR2.h
add src/Field/output_Tecplot_VMSDBR2_Boundary_Flux.h
add test/system/Asymptotic/ErrorOrder_2D_VMSDBR2_Triangle_AD_btest.cpp
edit test/unit/pde/ArtificialViscosity/AVSensor_Source2D_Euler_btest.cpp
add test/system/CodeConsistency/PDEmitAVDiffusionOuter2D_Consistency_afield_btest.cpp
edit src/pde/ArtificialViscosity/AVSensor_Source2D.h
edit src/pde/ArtificialViscosity/PDEmitAVSensorInner2D.h
edit src/pde/NS/PDERANSSA2D.h
edit src/pde/ArtificialViscosity/AVSensor_Source3D.h

Add another quadratic viscous term to Body Force model

by galbramc

edit src/Meshing/EGADS/RotorSource/Rotor.cpp
edit src/UserInterfaces/BodyForceSolver_impl.h
edit test/unit/pde/NS/PDEEulermitAVDiffusion3D_RotorSource_btest.cpp
edit src/Field/output_Tecplot/output_Tecplot_RotorSource.cpp
edit src/Meshing/EGADS/RotorSource/Rotor.h
edit src/pde/NS/PDEEuler3D_RotorSource.h
edit test/unit/pde/NS/PDEEuler3D_RotorSource_btest.cpp
edit test/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cpp

Updated surface flux writer for tecplot (VMSDBR2 specific). Added developer exceptions in to the Euler with artificial diffusion space-time calls since they',re not unit tested.

by blsc

edit src/pde/NS/PDEmitAVDiffusionOuter2D.h
edit src/pde/NS/PDEEulermitAVDiffusion2D.h
edit test/system/CodeConsistency/PDEmitAVSensor2D_Consistency_btest.cpp
edit test/system/CodeConsistency/PDEmitAVDiffusionOuter2D_Consistency_btest.cpp
edit src/pde/NS/PDEEulermitAVDiffusion1D.h
edit src/Field/output_Tecplot_VMSDBR2_Boundary_Flux.h

Add 8th order term to Body Forces

by galbramc

edit test/unit/pde/NS/PDEEulermitAVDiffusion3D_RotorSource_btest.cpp
edit src/UserInterfaces/BodyForceSolver_impl.h
edit test/unit/pde/NS/PDEEuler3D_RotorSource_btest.cpp
edit src/Meshing/EGADS/RotorSource/Rotor.h
edit src/Meshing/EGADS/RotorSource/Rotor.cpp
edit test/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cpp
edit src/pde/NS/PDEEuler3D_RotorSource.h
edit src/Field/output_Tecplot/output_Tecplot_RotorSource.cpp

Added the ability to specify is artificial diffusion should be applied to SA equation at run time. More unit tests. Caught a few more bugs.

by blsc

edit src/pde/NS/EulerArtificialViscosityType.h
edit test/unit/pde/NS/PDEEulermitAVDiffusion2D_RANSSA_btest.cpp
edit src/pde/NS/PDEEulermitAVDiffusion2D.h
edit src/pde/NS/PDEEulermitAVDiffusion3D.h
edit src/SolutionTrek/Continuation/Homotopy/Homotopy.h
edit src/pde/NS/PDEmitAVDiffusionOuter2D.h
edit test/unit/pde/NS/PDERANSSA2D_btest.cpp
edit test/system/CodeConsistency/PDEmitAVSensor2D_Consistency_btest.cpp
edit test/unit/pde/NS/PDEEulermitAVDiffusion3D_RANSSA_btest.cpp
edit src/pde/NS/PDEEulermitAVDiffusion1D.h
edit src/pde/NS/PDERANSSA3D.h
edit test/system/CodeConsistency/PDEmitAVSensor3D_Consistency_RANSSA_btest.cpp

More BodyForce output functionals

by galbramc

edit src/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.h
edit src/UserInterfaces/BodyForceSolver_impl.h
edit test/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cpp
edit src/pde/NS/OutputEuler3D.h

Add vera exclusions

by galbramc

edit scripts/vera/exclusions.txt

Warning fixes

by galbramc

edit test/system/CodeConsistency/PDEmitAVDiffusionOuter2D_Consistency_btest.cpp
edit test/sandbox/CMakeLists.txt
edit src/pde/NS/PDEmitAVDiffusionOuter2D.h
edit src/pde/NS/PDEEulermitAVDiffusion2D.h
edit src/pde/NS/PDEEulermitAVDiffusion3D.h
edit test/system/Asymptotic/ErrorOrder_2D_VMSDBR2_Triangle_AD_btest.cpp

Properly ignore ._ files in CMake

by galbramc

edit CMakeInclude/XCodeFileGlob.cmake

Missing override keyword in SolverInterface_VMSD_BR2. ErrorOrder_2D_VMSDBR2_Triangle_AD_btest runs in serial (communicator is split and each rank runs independently).

by blsc

edit src/Adaptation/MOESS/SolverInterface_VMSD_BR2.h
edit test/system/Asymptotic/ErrorOrder_2D_VMSDBR2_Triangle_AD_btest.cpp

One more warning fix

by galbramc

edit src/Adaptation/MOESS/SolverInterface_VMSD_BR2.h

Warning shows up in GNU 8

by galbramc

edit test/sandbox/CMakeLists.txt

Fix warning

by galbramc

edit test/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cpp

Relax tolerances for intel

by galbramc

edit test/unit/pde/ArtificialViscosity/AVSensor_Source3D_Euler_btest.cpp
edit test/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_Consistency_btest.cpp
edit test/unit/pde/NS/PDERANSSA2D_btest.cpp
edit test/system/CodeConsistency/PDEmitAVSensor2D_Consistency_RANSSA_btest.cpp
edit test/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_NavierStokes_Consistency_btest.cpp

needsSolutionGradient set to true for EntropyPower functional

by galbramc

edit src/pde/NS/PDEEuler3D.h
edit src/pde/NS/OutputEuler3D.h

Add Entropy to rotor output

by galbramc

edit src/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.h

Updated tolerance for intel in AVSensor_Source3D_Euler_btest

by blsc

edit test/unit/pde/ArtificialViscosity/AVSensor_Source3D_Euler_btest.cpp

Fix EntropyPt calculation. Remove old Euler3D source test.

by galbramc

edit src/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.h
edit test/unit/pde/NS/PDEEuler3D_btest.cpp

added gradients for standard atmosphere

by allmaras

edit test/unit/pde/sansBOOM/AtmosphereStandard_btest.cpp
edit src/pde/sansBOOM/AtmosphereStandard.h

added isothermal atmosphere model

by allmaras

add src/pde/sansBOOM/AtmosphereIsothermal.h
add test/unit/pde/sansBOOM/AtmosphereIsothermal_btest.cpp

added speed of sound to atmospheric models

by allmaras

edit test/unit/pde/sansBOOM/AtmosphereIsothermal_btest.cpp
edit src/pde/sansBOOM/AtmosphereIsothermal.h
edit test/unit/pde/sansBOOM/AtmosphereStandard_btest.cpp
edit src/pde/sansBOOM/AtmosphereStandard.h

Relax tolerances for intel

by galbramc

edit test/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_Consistency_btest.cpp
edit test/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_NavierStokes_Consistency_btest.cpp

More relaxed intel tolerances

by galbramc

edit test/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_Consistency_btest.cpp
edit test/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_NavierStokes_Consistency_btest.cpp

One more method for VMSD data transfer

by galbramc

edit src/Discretization/VMSDBR2/SolutionData_VMSD_BR2.h

Stabilized output for PV functional

by galbramc

edit src/UserInterfaces/BodyForceSolver_impl.h
edit src/pde/NS/OutputEuler3D.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.h
edit src/pde/ArtificialViscosity/AVSensor_Source3D.h
add test/unit/pde/NS/OutputEuler3D_btest.cpp

First draft of Axisymmetric DBL problem, vera not working, may require multiple commits to get through jenkins

by cwomack

edit test/unit/pde/AnalyticFunction/ScalarFunction2D_btest.cpp
add src/pde/OutputCell_SolutionErrorL2_Axisym.h
edit src/pde/AnalyticFunction/ScalarFunction2D.cpp
edit src/pde/AdvectionDiffusion/AdvectiveFlux2D.h
edit test/unit/pde/AdvectionDiffusion/AdvectiveFlux2D_btest.cpp
edit test/unit/pde/AdvectionDiffusion/BCAdvectionDiffusion2D_btest.cpp
edit test/unit/IO/pde/ScalarFunction2D_pattern.txt
edit src/pde/AnalyticFunction/ScalarFunction2D.h
edit test/unit/pde/AdvectionDiffusion/ViscousFlux2D_btest.cpp
edit test/unit/IO/pde/PDEAdvectionDiffusion2D_AdvectiveFlux2D_pattern.txt
add test/sandbox/Adapt2D_Galerkin_Stabilized_AD_AxiSymDoubleBoundaryLayer_toy.cpp

Fixed scope issues

by cwomack

edit test/sandbox/Adapt2D_Galerkin_Stabilized_AD_AxiSymDoubleBoundaryLayer_toy.cpp

Removed untested upwind option from isothermal walls in PDENavierStokes2D. It did not seem to be being used by any sandbox case or test.

by blsc

edit src/pde/NS/BCNavierStokes2D.h
edit src/pde/NS/BCNavierStokes2D.cpp

fixed vera errors

by cwomack

edit test/unit/pde/AdvectionDiffusion/AdvectiveFlux2D_btest.cpp
edit test/sandbox/Adapt2D_Galerkin_Stabilized_AD_AxiSymDoubleBoundaryLayer_toy.cpp

Actually remove the code related to the upwind flag.

by blsc

edit src/pde/NS/BCNavierStokes2D.h
edit src/pde/NS/BCNavierStokes2D.cpp

added output axisymmetric unit tests

by cwomack

add test/unit/pde/OutputCell_SolutionErrorL2_Axisym_btest.cpp

Changed unit test tolerance

by cwomack

edit test/unit/pde/AdvectionDiffusion/ViscousFlux2D_btest.cpp

Generalized axisym DBL for any z0 z1

by cwomack

edit test/unit/IO/pde/ScalarFunction2D_pattern.txt
edit test/unit/pde/AnalyticFunction/ScalarFunction2D_btest.cpp
edit src/pde/AnalyticFunction/ScalarFunction2D.cpp
edit test/unit/pde/AdvectionDiffusion/BCAdvectionDiffusion2D_btest.cpp
edit src/pde/AnalyticFunction/ScalarFunction2D.h
edit test/sandbox/Adapt2D_Galerkin_Stabilized_AD_AxiSymDoubleBoundaryLayer_toy.cpp

fixed vera errors

by cwomack

edit src/pde/AnalyticFunction/ScalarFunction2D.h

Add asymmetric term for rotor source

by galbramc

edit src/pde/NS/PDEEuler3D_RotorSource.h
edit scripts/vera/exclusions.txt
edit test/unit/pde/NS/PDEEuler3D_RotorSource_btest.cpp
edit test/unit/pde/NS/PDEEulermitAVDiffusion3D_RotorSource_btest.cpp
edit src/Field/NormalField/NormalField_Volume.cpp
edit src/Meshing/EGADS/RotorSource/Rotor.cpp
edit src/Meshing/EGADS/RotorSource/Rotor.h

Fix compile errors

by galbramc

edit src/UserInterfaces/BodyForceSolver_impl.h

Fix bug in last commit

by galbramc

edit test/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cpp
edit src/pde/NS/PDEEuler3D_RotorSource.h

Cleanup sourcePositivity

by galbramc

edit src/pde/NS/PDEEulermitAVDiffusion3D.h
edit test/unit/pde/NS/PDEEuler3D_RotorSource_btest.cpp
edit test/unit/pde/NS/PDEEulermitAVDiffusion3D_RANSSA_btest.cpp
edit test/unit/pde/NS/PDEEulermitAVDiffusion3D_RotorSource_btest.cpp
edit test/unit/pde/NS/PDEEulermitAVDiffusion3D_btest.cpp
edit src/Meshing/EGADS/EGCircle.cpp
edit src/pde/NS/PDEEulermitAVDiffusion2D.h
edit src/pde/NS/isPDERANSSA.h

Work around more floating point issues

by galbramc

edit src/pde/NS/Q2DPrimitiveSurrogate.h
edit src/pde/ArtificialViscosity/AVSensor_Source2D.h
edit src/tools/smoothmath.h
edit src/pde/NS/PDEEulermitAVDiffusion2D.h

More precision cleanup for AV source

by galbramc

edit src/pde/ArtificialViscosity/AVSensor_Source2D.h
edit src/pde/ArtificialViscosity/AVSensor_Source3D.h

Fogot a file

by galbramc

edit src/tools/smoothmath.h

Allow setting critical surrogate values in 3D

by galbramc

edit src/pde/NS/Q2DPrimitiveSurrogate.h
edit src/pde/NS/Q3DPrimitiveSurrogate.h

Fix compile error

by galbramc

edit src/pde/ArtificialViscosity/AVSensor_Source3D.h

Compiler error and warning fixes

by galbramc

edit src/pde/ArtificialViscosity/AVSensor_Source2D.h
edit test/unit/pde/NS/OutputEuler3D_btest.cpp

Make outer diffusion positvity source consisent with inner

by galbramc

edit src/pde/NS/PDEmitAVDiffusionOuter2D.h
edit src/pde/ArtificialViscosity/AVSensor_Source2D.h

Warning and tolernace fixes

by galbramc

edit test/unit/pde/ArtificialViscosity/AVSensor_Source2D_Euler_btest.cpp
edit src/pde/NS/PDERANSSA3D.h

Fix compile error

by galbramc

edit src/pde/NS/PDERANSSA3D.h

Cleanup 2D PressureGrad sensor

by galbramc

edit src/pde/NS/BCEulermitAVSensor2D.cpp
edit test/sandbox/Adapt2D_VMSD_Triangle_RANSSA_Joukowski_ArtificialViscosity_toy.cpp
edit test/sandbox/Adapt2D_CGStabilized_Triangle_RANSSA_Joukowski_Transonic_ArtificialViscosity_toy.cpp
edit src/pde/ArtificialViscosity/AVSensor_Source2D.h
edit test/sandbox/Adapt3D_VMSDBR2_RANSSA_DPW_AV_HTC_toy.cpp
edit test/sandbox/Solve2D_CGStabilized_Triangle_RANSSA_Joukowski_ArtificialViscosity_toy.cpp
edit test/sandbox/Adapt2D_CGStabilized_Triangle_RANSSA_Joukowski_ArtificialViscosity_toy.cpp
edit test/sandbox/Adapt2D_VMSDBR2_RANSSA_AV_MultiElementAirfoil_toy.cpp
edit test/sandbox/Solve2D_CGStabilized_Triangle_Euler_GaussianBump_ArtificialViscosity_toy.cpp
edit test/sandbox/Solve2D_VMSD_Triangle_NavierStokes_Joukowski_ArtificialViscosity_toy.cpp
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_ArtificialViscosity_RANSSA2D_PrimitiveConstVisc.cpp
edit test/unit/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_Stabilized_Triangle_SA_btest.cpp
edit test/unit/pde/ArtificialViscosity/AVSensor_Source2D_Euler_btest.cpp
edit test/sandbox/Solve2D_CGStabilized_Triangle_NavierStokes_Joukowski_ArtificialViscosity_toy.cpp
edit src/Discretization/DG/DGBR2_Instantiate/AlgebraicEquationSet_DGBR2_ArtificialViscosity_RANSSA2D_PrimitiveSutherland.cpp
edit test/sandbox/Solve2D_CGStabilized_HOW5_CI1_toy.cpp
edit test/sandbox/Adapt2D_VMSDBR2_RANSSA_AV_MultiElementAirfoil_Q1_toy.cpp
edit test/sandbox/Solve2D_CGStabilized_Triangle_Euler_NACA0012_ArtificialViscosity_toy.cpp
edit test/sandbox/Adapt2D_CGStabilized_Triangle_RANSSA_Joukowski_Subsonic_ArtificialViscosity_toy.cpp
edit test/sandbox/Solve2D_VMSD_HOW5_VI2_AV_toy.cpp
edit test/sandbox/Solve2D_DGBR2_HOW5_CI1_toy.cpp
edit test/sandbox/Adapt2D_CGStabilized_HOW5_CI1_ArtificialViscosity_toy.cpp
edit test/sandbox/Solve2D_CGStabilized_Triangle_NavierStokes_GaussianBump_ArtificialViscosity_toy.cpp
edit test/sandbox/Solve2D_VMSD_HOW5_CI1_toy.cpp

Relax tolerance

by galbramc

edit test/unit/pde/ArtificialViscosity/AVSensor_Source2D_Euler_btest.cpp

Change BDF routine to allow the order to ramp up when there is not enough past data and change the affected unit, system, and sandbox tests.

by deanna.sewell

edit test/sandbox/Solve1D_CG_Line_Euler_Sod_toy.cpp
edit test/system/Asymptotic/ErrorOrder_1D_CG_AD_BDF_btest.cpp
edit test/sandbox/Solve1D_DGBR2_Line_Euler_ArtNozzle_AV_BDF_toy.cpp
edit test/sandbox/Solve2D_DGBR2_Quad_Euler_ForwardFacingStep_AV_BDF_toy.cpp
edit test/sandbox/Solve1D_DGAdvective_BuckleyLeverett_BDF_toy.cpp
edit test/sandbox/Solve1D_DGAdvective_Line_Euler_Pulse_toy.cpp
edit test/system/Asymptotic/ErrorOrder_1D_DGBR2_AD_BDF_btest.cpp
edit test/system/Asymptotic/ErrorOrder_1D_HDG_AD_BDF_btest.cpp
edit src/SolutionTrek/TimeMarching/BackwardsDifference/BDF.h
edit test/sandbox/Solve1D_DGAdvective_Line_Euler_Sod_toy.cpp
edit test/unit/SolutionTrek/TimeMarching/BDF_btest.cpp

Missed one

by galbramc

edit test/sandbox/Adapt2D_CGStabilized_HOW5_CI1_ArtificialViscosity_toy.cpp

Missed one more

by galbramc

edit test/sandbox/Adapt2D_CGStabilized_Triangle_RANSSA_Joukowski_Transonic_ArtificialViscosity_toy.cpp

fixed typos

by deanna.sewell

edit test/unit/SolutionTrek/TimeMarching/BDF_btest.cpp

Relax tolerance

by galbramc

edit test/unit/pde/ArtificialViscosity/AVSensor_Source3D_Euler_btest.cpp

merge conflicts

by allmaras

edit test/sandbox/Adapt2D_Galerkin_Stabilized_AD_AxiSymDoubleBoundaryLayer_toy.cpp
edit test/unit/Discretization/Galerkin/JacobianFunctionalBoundaryTrace_WeightedResidual_Galerkin_btest.cpp
edit src/Field/output_Tecplot_VMSDBR2_Boundary_Flux.h
edit test/unit/Discretization/Galerkin/FunctionalBoundaryTrace_Galerkin_btest.cpp

Consistent 3D positvity source with Ben',s thesis

by galbramc

edit src/pde/NS/PDEEulermitAVDiffusion3D.h
edit test/unit/pde/NS/PDEEulermitAVDiffusion3D_RANSSA_btest.cpp
edit test/unit/pde/NS/PDEEulermitAVDiffusion3D_btest.cpp

Add asymmetric sensitvities for body forces. Some more cleanup of shock capturing.

by galbramc

edit src/UserInterfaces/BodyForceSolver_impl.h
edit src/pde/NS/PDEEulermitAVDiffusion2D.h
edit test/unit/pde/NS/PDEEulermitAVDiffusion3D_RotorSource_btest.cpp
edit src/pde/NS/EulerArtificialViscosityType.h
edit src/pde/ArtificialViscosity/AVSensor_Source3D.h
edit src/pde/NS/PDEEuler3D_RotorSource.h
edit test/unit/pde/NS/PDERANSSA2D_btest.cpp
edit test/unit/pde/NS/PDEEulermitAVDiffusion2D_btest.cpp
edit src/pde/ArtificialViscosity/AVSensor_Source2D.h
edit test/unit/pde/NS/PDEEuler3D_btest.cpp
edit test/unit/pde/NS/PDEEuler3D_RotorSource_btest.cpp
edit test/unit/pde/NS/PDEEuler2D_btest.cpp

Make PDEmitAVDiffusionOuter2D.h consistent

by galbramc

edit src/pde/NS/PDEmitAVDiffusionOuter2D.h

Fix warning and typo

by galbramc

edit src/UserInterfaces/BodyForceSolver_impl.h

Relax tolerance and fix warning

by galbramc

edit test/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_NavierStokes_Consistency_btest.cpp
edit test/unit/pde/NS/PDEEulermitAVDiffusion2D_btest.cpp

One more tolerance relaxation

by galbramc

edit test/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_Consistency_btest.cpp

incorporated Axes into integrand classes primarily via PDE::Axes

by allmaras

edit src/pde/NDConvert/OutputNDConvertSpace1D.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Galerkin.h
edit src/Discretization/Galerkin/IntegrandCell_Galerkin_StrongForm.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_BCDataField.h
edit src/pde/NDConvert/FunctionNDConvertSpace1D.h
edit src/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.h
edit src/Discretization/Galerkin/IntegrandInteriorTrace_Galerkin_manifold.h
edit src/Discretization/LIP_HACK/IntegrandFunctor_Galerkin_WakeCut_LIP.h
edit src/Discretization/HDG/IntegrandInteriorTrace_HDGAdvective.h
edit src/Discretization/Integrand_Type.h
edit src/Discretization/Potential_Adjoint/IntegrandBoundaryTrace_WakeCut_CG_LIP_Adjoint.h
edit src/Discretization/Potential_Adjoint/AlgebraicEquationSet_CG_Potential_Adjoint.h
edit src/Discretization/HDG/IntegrandBoundaryTrace_OutputWeightRsd_HDG.h
edit src/Discretization/HDG/IntegrandBoundaryTrace_LinearScalar_sansLG_HDGAdvective.h
edit src/Discretization/VMSDBR2/IntegrandBoundaryTrace_LinearScalar_sansLG_VMSD_BR2.h
edit src/Discretization/HDG/IntegrandBoundaryTrace_None_HDGAdvective.h
edit src/pde/NDConvert/OutputNDConvertSpace3D.h
edit src/Discretization/LIP_HACK/IntegrandCell_Galerkin_Darmofal.h
edit src/Discretization/DG/IntegrandInteriorTrace_DGBR2_manifold.h
edit src/Discretization/Galerkin/IntegrandCell_Galerkin_Output.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_Stabilized.h
edit src/Discretization/Galerkin/IntegrandBoundaryTrace_Dirichlet_mitLG_Galerkin_manifold.h
edit src/Discretization/Galerkin/IntegrandBoundaryTrace_None_Galerkin_manifold.h
edit src/Discretization/VMSD/IntegrandBoundaryTrace_Dirichlet_sansLG_VMSD.h
edit src/Discretization/Galerkin/IntegrandCell_Galerkin_Stabilized_Corrected.h
edit src/Discretization/Galerkin/Integrand_Galerkin_fwd.h
edit test/unit/Discretization/Galerkin/IntegrandCell_Galerkin_StrongForm_AD_btest.cpp
edit src/Discretization/DG/IntegrandInteriorTrace_DGBR2.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_Stabilized_LiftedBoundary.h
edit src/Discretization/DG/IntegrateBoundaryTrace_Dispatch_DGBR2.h
edit src/Discretization/HDG/ResidualCell_HDG_HB.h
edit src/Discretization/HDG/IntegrandFunctor_HDG_PTC.h
edit src/Discretization/VMSD/IntegrandBoundaryTrace_Robin_sansLG_VMSD.h
edit src/Discretization/DG/IntegrandCell_DGBR2_Output.h
edit src/Discretization/Galerkin/IntegrandBoundaryTrace_Flux_mitState_Nitsche.h
edit src/Discretization/Galerkin/ResidualBoundaryTrace_Dirichlet_mitLG_Galerkin.h
edit src/Discretization/Potential_Adjoint/AlgebraicEquationSet_CG_Potential_Virtual.h
edit test/unit/Discretization/Galerkin/IntegrandBoundaryTrace_Dirichlet_mitState_Galerkin_manifold_IBL2D_btest_outdated.cpp
edit test/unit/Discretization/Galerkin/IntegrandCell_Galerkin_Output_Stabilized_AD_btest.cpp
edit src/pde/NDConvert/PDENDConvertSpaceTime2D.h
edit src/Discretization/VMSD/IntegrandBoundaryTrace_Dirichlet_mitLG_VMSD.h
edit src/Discretization/Galerkin/IntegrandCell_Galerkin.h
edit src/pde/NDConvert/PDENDConvertSpaceTime3D.h
edit src/pde/NDConvert/BCNDConvertSpace2D.h
edit src/Discretization/DG/AlgebraicEquationSet_DGAdvective.h
edit src/Discretization/LIP_HACK/IntegrandBoundaryFrame_Galerkin_Circ.h
edit src/Discretization/HDG/IntegrandFunctor_HDG_HB.h
edit src/Discretization/Galerkin/IntegrandBoundaryTrace_Dirichlet_sansLG_Galerkin_manifold.h
edit src/Discretization/Galerkin/IntegrandCell_Galerkin_Stabilized.h
edit src/Discretization/Galerkin/JacobianCell_Galerkin_CutCellTransitionIBL.h
edit src/Discretization/Galerkin/IntegrandBoundaryTrace_Dirichlet_mitLG_Galerkin.h
edit src/Discretization/VMSDBR2/IntegrandCell_VMSD_BR2.h
edit src/Discretization/VMSD/IntegrandCell_VMSD_PTC.h
edit src/Discretization/Galerkin/IntegrandCell_Galerkin_Conservative.h
edit src/Discretization/LIP_HACK/IntegrandBoundaryFrameTrace_Galerkin.h
edit src/pde/NDConvert/PDENDConvertSpace1D.h
edit src/Discretization/HDG/IntegrandBoundaryTrace_LinearScalar_sansLG_HDG.h
edit src/Discretization/Potential_Drela/IntegrandBoundaryTrace_WakeCut_CG_LIP_Drela.h
edit src/Discretization/Galerkin/IntegrandInteriorTrace_Galerkin_Stabilized.h
edit src/Discretization/Potential_Drela/IntegrandBoundaryFrame_CG_FP_Drela.h
edit test/unit/Discretization/Galerkin/IntegrandCell_Galerkin_BDF_AD_btest.cpp
edit src/Discretization/VMSDBR2/IntegrandBoundaryTrace_Flux_mitState_VMSD_BR2.h
edit src/pde/NDConvert/FunctionNDConvertSpaceTime3D.h
edit src/Discretization/Galerkin/IntegrandCell_Galerkin_Output_Stabilized.h
edit src/Discretization/LIP_HACK/IntegrandBoundaryFrame_Galerkin.h
edit src/Discretization/Galerkin/IntegrandBoundaryTrace_WakeMatch_Galerkin_IBL.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.h
edit src/Discretization/Galerkin/IntegrandCell_Galerkin_PTC_manifold_IBL3D.h
edit src/Discretization/Galerkin/JacobianCell_Galerkin_Param_CutCellTransitionIBLUniField.h
edit src/Discretization/FV_TPFA/AlgebraicEquationSet_FV_TPFA.h
edit src/Discretization/HDG/IntegrandBoundaryTrace_Dirichlet_mitLG_HDG.h
edit src/Discretization/Potential_Drela/IntegrandBoundaryFrame_CG_LIP_Drela.h
edit src/Discretization/LIP_HACK/IntegrandBoundaryTrace_Galerkin_WakeCut_LIP_SRA.h
edit src/Discretization/Galerkin/IntegrandCell_Project.h
edit src/Discretization/VMSD/AlgebraicEquationSet_Local_VMSD.h
edit src/Discretization/VMSDBR2/IntegrandBoundaryTrace_Dirichlet_mitLG_VMSD_BR2.h
edit src/Discretization/VMSD/AlgebraicEquationSet_VMSD.h
edit test/unit/Discretization/Galerkin/IntegrateBoundaryTrace_Dispatch_Galerkin_AD_1D_btest.cpp
edit src/Discretization/Galerkin/IntegrandCell_Galerkin_PTC.h
edit src/Discretization/HDG/IntegrandBoundaryTrace_LinearScalar_mitLG_HDG.h
edit src/Discretization/HDG/ResidualBoundaryTrace_HDGAdvective.h
edit test/unit/Discretization/Galerkin/JacobianBoundaryTrace_Dirichlet_mitState_Galerkin_Param_IBL2D_btest_outdated.cpp
edit src/Discretization/LIP_HACK/IntegrandFunctorCell_Galerkin_Kutta_LIP.h
edit src/Field/ProjectSoln/Project_DG_to_CG/Project_DG_to_CG_impl.h
edit src/Discretization/VMSD/IntegrandBoundaryTrace_LinearScalar_mitLG_VMSD.h
edit src/Discretization/Galerkin/ResidualCell_Galerkin_CutCellTransitionIBLUniField.h
edit src/Discretization/Galerkin/IntegrandCell_Galerkin_HB.h
edit src/Discretization/Galerkin/IntegrandBoundaryTrace_Output_Galerkin.h
edit src/pde/NDConvert/FunctionNDConvertSpace4D.h
edit src/Discretization/VMSD/IntegrandCell_VMSD_Output.h
edit src/Discretization/Galerkin/IntegrandCell_Galerkin_IRS.h
edit src/Discretization/Galerkin/IntegrandCell_Galerkin_manifold_IBL3D.h
edit src/Discretization/VMSD/IntegrandTrace_VMSD.h
edit src/Discretization/Galerkin/IntegrandBoundaryTrace_Robin_sansLG_Galerkin.h
add src/tools/Axes.h
edit test/unit/Discretization/Galerkin/ElementIntegral_Galerkin_2D_Triangle_AD_btest.cpp
edit src/Discretization/HDG/IntegrandCell_HDG_Output.h
edit src/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_CutcellTransitionIBL.h
edit src/Discretization/VMSDBR2/IntegrandTrace_VMSD_BR2.h
edit src/pde/NDConvert/FunctionNDConvertSpaceTime1D.h
edit src/Discretization/VMSDBR2/AlgebraicEquationSet_Local_VMSD_BR2.h
edit src/Discretization/Galerkin/IntegrandCell_Galerkin_CutCellTransitionIBLUniField.h
edit src/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_Galerkin_LIP_HACK.h
edit src/pde/NDConvert/FunctionNDConvertSpace2D.h
edit src/Discretization/Galerkin/IntegrandCell_Galerkin_HSMKL.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Local_Galerkin_Stabilized.h
edit src/Discretization/Potential_Drela/IntegrandBoundaryTrace_WakeCut_CG_FP_Drela.h
edit src/Discretization/DG/IntegrandBoundaryTrace_OutputWeightRsd_DGBR2.h
edit src/Discretization/LIP_HACK/IntegrandInteriorTrace_Galerkin_WakeCut_LIP_SRA.h
edit src/pde/NDConvert/PDENDConvertSpaceTime1D.h
edit src/Discretization/VMSDBR2/IntegrandBoundaryTrace_Output_VMSD_BR2.h
edit src/Discretization/Galerkin/JacobianCell_Galerkin_CutCellTransitionIBLUniField.h
edit src/Discretization/HDG/IntegrandBoundaryTrace_Dirichlet_sansLG_HDG.h
edit src/Discretization/HDG/IntegrandBoundaryTrace_Flux_mitState_HDG.h
edit src/Discretization/Galerkin/IntegrandBoundaryTrace_LinearScalar_sansLG_Galerkin.h
edit src/Discretization/HDG/AlgebraicEquationSet_HDG.h
edit src/pde/NDConvert/PDENDConvertSpace3D.h
edit src/Discretization/LIP_HACK/IntegrandFunctor_Galerkin_WakeCut_sansLG.h
edit src/Discretization/Galerkin/IntegrandBoundaryTrace_Dirichlet_Galerkin_HSM2D.h
edit src/Discretization/Galerkin/IntegrandBoundaryTrace_Dirichlet_sansLG_Galerkin.h
edit src/Discretization/VMSD/IntegrandCell_VMSD.h
edit src/Discretization/Galerkin/IntegrandBoundaryTrace_OutputWeightRsd_Galerkin.h
edit src/Discretization/Potential_Adjoint/IntegrandBoundaryTrace_WakeCut_CG_FP_Virtual.h
edit src/Discretization/LIP_HACK/IntegrandBoundaryTrace_Galerkin_Wall_IPTF.h
edit src/pde/HSM/PDEHSM2D.h
edit src/Discretization/DG/IntegrandCell_DGBR2.h
edit src/Discretization/Galerkin/IntegrandCell_Galerkin_CutCellTransitionIBL.h
edit src/Discretization/VMSDBR2/IntegrandBoundaryTrace_OutputWeightRsd_VMSD_BR2.h
edit src/Discretization/HDG/IntegrandBoundaryTrace_None_HDG.h
edit src/PanelMethod/FunctionEvalQauxv_IBL2D_XfoilPanel.h
edit src/Discretization/DG/IntegrandCell_DGBR2_manifold.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Local_Galerkin.h
edit src/Discretization/FV_TPFA/IntegrandCell_FV_TPFA.h
edit src/Discretization/DG/AlgebraicEquationSet_DGBR2.h
edit src/Discretization/VMSD/IntegrandBoundaryTrace_LinearScalar_sansLG_VMSD.h
edit src/Discretization/HDG/IntegrandInteriorTrace_HDG.h
edit src/Discretization/DG/IntegrandBoundaryTrace_Flux_mitState_DGBR2_manifold.h
edit src/pde/HSM/PDEHSMKL.h
edit src/Discretization/Galerkin/ResidualCell_Galerkin_CutCellTransitionIBL.h
edit src/Discretization/DG/IntegrandBoundaryTrace_Output_DGBR2.h
edit src/Discretization/HDG/IntegrandBoundaryTrace_Flux_mitState_HDGAdvective.h
edit src/pde/NDConvert/FunctionNDConvertSpace3D.h
edit src/pde/NDConvert/OutputNDConvertSpaceTime1D.h
edit src/pde/NDConvert/OutputNDConvertSpaceTime2D.h
edit src/Discretization/Galerkin/ResidualBoundaryTrace_mitLG_Galerkin.h
edit src/Discretization/HDG/IntegrandBoundaryTrace_Robin_sansLG_HDG.h
edit test/unit/Discretization/Galerkin/IntegrandCell_Galerkin_CR_btest.cpp
edit src/Discretization/HDG/IntegrandBoundaryTrace_Output_HDG.h
edit src/Discretization/Galerkin/IntegrandBoundaryTrace_None_Galerkin.h
edit src/Discretization/VMSDBR2/IntegrandBoundaryTrace_None_VMSD_BR2.h
edit src/pde/NDConvert/OutputNDConvertSpace4D.h
edit test/sandbox/Solve2D_DGBR2_Triangle_P_Poisson_Distance_toy.cpp
edit src/ErrorEstimate/ErrorEstimate_L2.h
edit src/Discretization/VMSDBR2/IntegrandBoundaryTrace_Robin_sansLG_VMSD_BR2.h
edit src/Discretization/Galerkin/IntegrandBoundaryTrace_Flux_mitState_Galerkin_manifold.h
edit src/Discretization/Galerkin/IntegrandCell_ProjectDistance.h
edit src/Discretization/HDG/IntegrandBoundaryTrace_HubTrace_HDGAdvective.h
edit src/Discretization/Galerkin/IntegrandCell_Galerkin_manifold.h
edit src/Discretization/VMSDBR2/AlgebraicEquationSet_VMSD_BR2.h
edit src/Discretization/HDG/IntegrandBoundaryTrace_LinearScalar_mitLG_HDGAdvective.h
edit src/Discretization/Galerkin/IntegrandInteriorTrace_Galerkin_StrongForm.h
edit src/Discretization/VMSD/IntegrandBoundaryTrace_None_VMSD.h
edit src/Discretization/Galerkin/IntegrandInteriorTrace_Galerkin.h
edit src/Discretization/DG/IntegrandBoundaryTrace_Flux_mitState_DGBR2.h
edit src/Discretization/Galerkin/IntegrandCell_Galerkin_HSM2D.h
edit src/Discretization/Galerkin/ResidualParamSensitvity_Galerkin_Stabilized.h
edit test/unit/Discretization/Galerkin/IntegrandCell_Galerkin_Stabilized_AD_btest.cpp
edit src/Discretization/Galerkin/IntegrandCell_Galerkin_StrongForm_Stabilized.h
edit src/Discretization/HDG/IntegrandCell_HDG.h
edit src/PanelMethod/FunctionEvalQauxv_IBL_PiecewiseConstSourcePanel_FlatPlate3D.h
edit src/Discretization/FV_TPFA/IntegrandCell_FV_TPFA_Output.h
edit src/Discretization/VMSDBR2/IntegrandBoundaryTrace_Dirichlet_sansLG_VMSD_BR2.h
edit src/Discretization/Galerkin/IntegrandCell_Galerkin_BDF.h
edit src/Discretization/Galerkin/IntegrandCell_Galerkin_PTC_manifold.h
edit src/Discretization/DG/IntegrandBoundaryTrace_LinearScalar_sansLG_DGBR2.h
edit src/Discretization/LIP_HACK/IntegrandInteriorTrace_Galerkin_WakeCut_IPTF.h
edit src/Discretization/VMSDBR2/IntegrandBoundaryTrace_LinearScalar_mitLG_VMSD_BR2.h
edit src/Discretization/DG/AlgebraicEquationSet_TransitionIBL.h
edit src/pde/NDConvert/FunctionNDConvertSpaceTime2D.h
edit src/Discretization/VMSD/IntegrandBoundaryTrace_OutputWeightRsd_VMSD.h
edit src/Discretization/Galerkin/IntegrandInteriorTrace_SIP_Galerkin.h
edit src/pde/NDConvert/OutputNDConvertSpace2D.h
edit src/Discretization/LIP_HACK/IntegrandBoundaryTrace_Galerkin_Farfield_IPTF.h
edit src/pde/NDConvert/OutputNDConvertSpaceTime3D.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Local_Project.h
edit src/pde/NDConvert/PDENDConvertSpace2D.h
edit src/Discretization/FV_TPFA/IntegrandInteriorTrace_FV_TPFA.h
edit src/Discretization/Galerkin/IntegrandInteriorTrace_JumpPenalty.h
edit src/Discretization/Galerkin/IntegrandBoundaryTrace_LinearScalar_mitLG_Galerkin.h
edit src/Discretization/HDG/AlgebraicEquationSet_HDGAdvective.h
edit src/Discretization/VMSD/IntegrandBoundaryTrace_Flux_mitState_VMSD.h
edit src/Discretization/Galerkin/IntegrandCell_ProjectFunction.h
edit src/Discretization/Galerkin/JacobianCell_Galerkin_Param_CutCellTransitionIBL.h

Add parameters to rotate body force normal field

by galbramc

edit src/pde/NS/PDEEuler3D_RotorSource.h
edit test/unit/pde/NS/PDEEuler3D_RotorSource_btest.cpp
edit src/tools/smoothmath.h
edit test/unit/pde/NS/PDEEulermitAVDiffusion3D_RotorSource_btest.cpp

Forgot instantiation

by galbramc

edit src/LinearAlgebra/DenseLinAlg/StaticSize/MatMul/MatrixS_MatMul_Native_Surreal_Instantiate.cpp

Make lifting operator calculation lazy to prevent computing lifting operators in isValidState. Homotopy fix for negative lambda. Charachteristic SupersonicOutflow in 2D. Dirichlet NoSlip BC for Sensor PDE. Some cleanup of MatrixS_Diag.

by galbramc

edit src/pde/NS/PDEEuler3D.h
edit src/pde/NS/PDEEulermitAVDiffusion2D.h
edit src/pde/AdvectionDiffusion/PDEAdvectionDiffusion3D.h
edit src/pde/NS/PDEEuler3D_RotorSource.h
edit test/unit/pde/NS/PDERANSSA3D_btest.cpp
edit src/LinearAlgebra/DenseLinAlg/DynamicSize/MatrixD_Diag.h
edit src/Python/InputException.h
edit src/Discretization/DG/AlgebraicEquationSet_DGAdvective.h
edit test/unit/SolutionTrek/Continuation/PDESourceOnly_btest.cpp
edit src/pde/NDConvert/PDENDConvertSpace3D.h
edit src/pde/NS/BCEulermitAVSensor2D.h
edit src/Meshing/AnalyticMetrics/Euclidean.h
edit src/pde/ArtificialViscosity/AVSensor_Source2D.h
edit src/Discretization/DG/AlgebraicEquationSet_DGBR2_impl.h
edit src/LinearAlgebra/DenseLinAlg/StaticSize/MatrixS_Log.h
edit src/Python/InputException.cpp
edit CMakeInclude/ForceOutOfSource.cmake
edit src/Discretization/DG/AlgebraicEquationSet_Local_DG_impl.h
edit src/pde/ArtificialViscosity/PDEmitAVSensorInner2D.h
edit src/Discretization/VMSDBR2/AlgebraicEquationSet_Local_VMSD_BR2.h
edit src/Discretization/VMSDBR2/AlgebraicEquationSet_VMSD_BR2.h
edit src/Meshing/AnalyticMetrics/XField.h
edit src/Meshing/AnalyticMetrics/CornerSingularity.h
edit test/unit/pde/NS/BCEulermitAVSensor2D_btest.cpp
edit src/pde/NS/PDERANSSA3D.h
edit src/pde/ArtificialViscosity/PDEmitAVSensor3D.h
edit test/unit/pde/NS/PDEEuler3D_btest.cpp
edit src/pde/NS/PDEEulermitAVDiffusion3D.h
edit src/pde/NDConvert/PDENDConvertSpace2D.h
edit src/SolutionTrek/Continuation/Homotopy/PDESourceOnly.h
edit src/pde/NS/PDERANSSA2D.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Local_Galerkin_Stabilized.h
edit src/Meshing/AnalyticMetrics/BoundaryLayer.h
edit src/LinearAlgebra/DenseLinAlg/StaticSize/MatrixS_Diag.h
edit src/SolutionTrek/Continuation/Homotopy/Homotopy.h
edit src/Discretization/DG/AlgebraicEquationSet_DGBR2.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Local_Galerkin_Stabilized_LiftedBoundary.h
edit test/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_NavierStokes_Consistency_btest.cpp
edit src/pde/NS/PDEEuler2D.h
edit src/Discretization/DG/AlgebraicEquationSet_DGAdvective_impl.h
edit test/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_Consistency_btest.cpp
edit src/pde/NS/BCEuler2D_mitState.h
edit src/UserInterfaces/BodyForceSolver_impl.h
edit test/unit/pde/NS/PDEEuler2D_btest.cpp
edit src/pde/NS/BCEulermitAVSensor3D.h
edit src/pde/AdvectionDiffusion/PDEAdvectionDiffusion2D.h
edit test/unit/pde/NS/PDERANSSA2D_btest.cpp
edit test/unit/pde/ArtificialViscosity/PDEmitAVSensor2D_btest.cpp
edit src/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_Stabilized_LiftedBoundary.h
edit src/LinearAlgebra/DenseLinAlg/StaticSize/MatrixS_Pow.h
edit src/pde/ArtificialViscosity/PDEmitAVSensor2D.h
edit src/LinearAlgebra/DenseLinAlg/StaticSize/MatrixS_Exp.h
edit src/pde/ArtificialViscosity/AVSensor_Source3D.h

Fix test for last commit

by galbramc

edit test/unit/SolutionTrek/Continuation/PDESourceOnly_btest.cpp

Fix for lazy lifting operator calculations

by galbramc

edit src/Discretization/DG/AlgebraicEquationSet_DGBR2_impl.h

standard atmo: moved non-templated functions to *.cpp file

by allmaras

add src/pde/sansBOOM/AtmosphereStandard.cpp
edit src/pde/sansBOOM/RayPath.h
edit src/pde/sansBOOM/AtmosphereStandard.h
edit src/pde/sansBOOM/CMakeLists.txt

stupid tabs!!

by allmaras

edit src/pde/sansBOOM/RayPath.h

namespace needed in cpp file

by allmaras

edit src/pde/sansBOOM/AtmosphereStandard.cpp

Fix for turning off USE_CORRECTION_TERM

by galbramc

edit src/Adaptation/MOESS/SolverInterface_VMSD_BR2.h

removed DeveloperException check for hessians of density-temperature primitive vars

by allmaras

edit test/unit/pde/NS/PDEEuler2D_btest.cpp
edit test/unit/pde/NS/PDERANSSA2D_btest.cpp
edit test/unit/pde/NS/PDEEulermitAVDiffusion2D_btest.cpp
edit test/unit/pde/NS/PDEEulermitAVDiffusion3D_btest.cpp

Another correction to turning off USE_CORRECTION_TERM

by galbramc

edit src/Adaptation/MOESS/SolverInterface_VMSD_BR2.h

Relax tolerance

by galbramc

edit test/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_NavierStokes_Consistency_btest.cpp

Only compute lifting operatos if setSolutionField is called. Needed for proper error estimates.

by galbramc

edit src/Discretization/DG/AlgebraicEquationSet_DGAdvective_impl.h
edit src/Discretization/DG/AlgebraicEquationSet_DGBR2_impl.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_Stabilized_LiftedBoundary.h
edit src/Discretization/VMSDBR2/AlgebraicEquationSet_VMSD_BR2.h

ray path for single layer, tested for both isothermal and linear temperature layers

by allmaras

edit test/unit/pde/sansBOOM/RayPath_btest.cpp
edit src/pde/sansBOOM/AtmosphereIsothermal.h
edit test/unit/pde/sansBOOM/AtmosphereIsothermal_btest.cpp
edit src/pde/sansBOOM/RayPath.h

More intel tolerance relaxing

by galbramc

edit test/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_Consistency_btest.cpp

Remove DeveloperException check

by galbramc

edit test/unit/pde/ArtificialViscosity/PDEmitAVSensor2D_btest.cpp

Use implied metric in cost calculation for isotropic optimization

by galbramc

edit src/Adaptation/MOESS/NodalMetrics/NodalMetrics_impl.h

new adaptation script for Pointwise, also hard-coded viscous layers parameters

by allmaras

edit src/Meshing/Pointwise/MesherInterface_Pointwise.cpp

Relaxier tolerance

by galbramc

edit test/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_Consistency_btest.cpp

some machines need cmath, not mine

by allmaras

edit src/pde/sansBOOM/RayPath.h

fixed line length issue

by allmaras

edit src/Meshing/Pointwise/MesherInterface_Pointwise.cpp

Another tolerance relaxation

by galbramc

edit test/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_NavierStokes_Consistency_btest.cpp

Intel...

by galbramc

edit test/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_Consistency_btest.cpp

Intel...

by galbramc

edit test/system/CodeConsistency/PDEmitAVDiffusionOuter2D_PDEmitAVSensor2D_NavierStokes_Consistency_btest.cpp

removed class Cartesian, Cylindrical, Axisymmetric from SANSnumerics.h and all *.h, *.cpp files,

by allmaras

edit src/Discretization/Potential_Adjoint/IntegrandBoundaryTrace_WakeCut_CG_FP_Virtual.h
edit src/Discretization/Potential_Adjoint/IntegrandBoundaryFrame_CG_FP_Virtual.h
edit test/system/LocalSolve/LocalSolve1D_Split_HDG_AD_btest.cpp
edit test/system/Asymptotic/ErrorEstimateOrder_2D_DGAdvective_Triangle_AD_btest.cpp
edit src/Field/XField/XFieldSpacetime_Traits.h
edit test/system/AnalyticSolve/AnalyticSolve2D_DGAdvective_Triangle_Euler_UniformStream_btest.cpp
edit test/system/BlockSolve/Block_1D_Decoupled_Burgers_btest.cpp
edit test/system/LocalSolve/ElementLocalSolve1D_DGBR2_Triangle_AD_btest.cpp
edit test/system/Asymptotic/ErrorOrder_2D_DGBR2_RANS_MMS_btest.cpp
edit test/unit/Field/Element/ElementXFieldArea_3D_Triangle_btest.cpp
edit src/Field/XField/XFieldNode_Traits.h
edit test/system/AnalyticSolve/AnalyticSolve2D_DGBR2_Triangle_NavierStokes_btest.cpp
edit test/unit/Field/Element/ElementXFieldLine_2D_btest.cpp
edit test/unit/Discretization/Galerkin/IntegrandCell_Galerkin_Output_Stabilized_AD_btest.cpp
edit test/system/LocalSolve/ElementDualLocalSolve3D_Galerkin_Stabilized_Triangle_AD_btest.cpp
edit test/system/Asymptotic/ErrorEstimateOrder_3D_CG_Tet_AD_btest.cpp
edit test/system/Asymptotic/ErrorEstimateOrder_2D_HDG_Triangle_AD_btest.cpp
edit test/system/Asymptotic/ErrorOrder_1D_DGBR2_AD_btest.cpp
edit test/system/Asymptotic/ErrorOrder_1D_HDG_AD_BDF_btest.cpp
edit test/system/Adaptation/SolverInterface_Galerkin_Stabilized_btest.cpp
edit test/unit/Field/Element/ElementXFieldArea_2D_Quad_btest.cpp
edit test/unit/Field/Element/ElementXFieldVolume_Tetrahedron_btest.cpp
edit test/system/Asymptotic/AWErrorEst_1D_HDG_Line_AD_btest_LGOFF.cpp
edit src/SolutionTrek/Continuation/PseudoTime/SetLocalTimeStep.h
edit test/unit/Field/Element/ElementXFieldArea_3D_Quad_btest.cpp
edit test/system/Asymptotic/ErrorOrder_1D_HDGAdvective_Advection_btest.cpp
edit test/system/Asymptotic/ErrorOrder_2D_CG_Triangle_AD_Bernstein_btest.cpp
edit src/pde/IBL/ElementProjectionIBLoutput_L2.h
edit test/system/LocalSolve/AlgebraicEquationSet_Local_VMSDBR2_Triangle_AD_btest.cpp
edit test/system/Asymptotic/ErrorOrder_1D_DGBR2_AD_Bernstein_btest.cpp
edit test/system/LocalSolve/AlgebraicEquationSet_Local_VMSD_Triangle_AD_btest.cpp
edit test/system/AnalyticSolve/AnalyticSolve3D_IBLFourEqn_StagnationFlow_LamiBL_Triangle_btest.cpp
edit src/Discretization/HDG/AWIntegrandFunctor_HDG.h
edit test/unit/Discretization/DG/IntegrandCell_DGAdvective_Euler2D_btest.cpp
edit test/system/Asymptotic/ErrorOrder_2D_HDG_Triangle_AD_btest.cpp
edit src/pde/FullPotential/IntegrandBoundary3D_FP_Force.h
edit test/system/AnalyticSolve/AnalyticSolve_HDG_AD_btest.cpp
edit src/Field/XField/XField.h
edit test/system/CodeConsistency/Solve2D_Uncoupled_HDGAdvectiveIBL_LamiBL_btest.cpp
edit src/Discretization/Potential_Drela/IntegrandBoundaryTrace_WakeCut_CG_LIP_Drela.h
edit src/pde/FullPotential/FullPotential3D_Trefftz.h
edit src/Field/XField/XFieldVolume.h
edit test/system/LocalSolve/LocalSolve2D_Split_HDG_Triangle_AD_btest.cpp
edit test/system/Asymptotic/ErrorOrder_3D_CG_Sphere_Triangle_AD_btest.cpp
edit src/PanelMethod/FunctionEvalQauxv_IBL2D_XfoilPanel.h
edit test/system/Asymptotic/ErrorOrder_2D_VMSDBR2_Triangle_AD_btest.cpp
edit test/unit/Field/Element/ElementXFieldVolume_4D_Tetrahedron_btest.cpp
edit src/Field/output_Tecplot_VMSDBR2_Boundary_Flux.h
edit test/system/Asymptotic/ErrorEstimateOrder_2D_CG_Triangle_AD_btest.cpp
edit test/system/Asymptotic/ErrorOrder_3D_DGBR2_Tet_AD_btest.cpp
edit test/system/Asymptotic/ErrorOrder_2D_EDG_Triangle_AD_btest.cpp
edit test/system/CodeConsistency/Solve2D_Coupled4x4_IBLSplitAmpLag_CorrelationClosure_CapturedTransition_PTC_btest.cpp
edit test/system/Asymptotic/Adjoint2D_CG_Triangle_AD_btest.cpp
edit src/Discretization/DG/DiscretizationDGBR2.h
edit src/Discretization/HDG/AWIntegrandBCFunctor_HDG.h
edit src/Discretization/LIP_HACK/IntegrandBoundaryTrace_Galerkin_Farfield_IPTF.h
edit test/system/Asymptotic/ErrorOrder_2D_CGStabilized_RANS_MMS_btest.cpp
edit src/Field/FindElementFromX.cpp
edit src/pde/FullPotential/IntegrandBoundary3D_LIP_Force.h
edit test/system/CodeConsistency/AlgebraicEquationSet_PTC_VMSD_Triangle_SA_btest.cpp
edit src/PanelMethod/XfoilPanel.h
edit src/Discretization/LIP_HACK/IntegrandBoundaryFrame_Galerkin.h
edit test/system/LocalSolve/EdgeLocalSolve1D_Dual_Galerkin_Stabilized_Line_AD_btest.cpp
edit test/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_HDGAdvIBL_Panel_btest.cpp
edit test/system/LocalSolve/ElementDualLocalSolve2D_Galerkin_Stabilized_Triangle_AD_btest.cpp
edit test/system/Asymptotic/ErrorOrder_3D_CG_Hex_AD_btest.cpp
edit src/Field/XField/XFieldArea_Instantiate_3D.cpp
edit test/system/CodeConsistency/VMSDBR2_BubbleModes_btest.cpp
edit test/system/Adaptation/SolverInterface_DGAdvective_btest.cpp
edit test/system/Asymptotic/ErrorOrder_1D_CG_AD_BDF_btest.cpp
edit src/pde/FullPotential/LinearizedIncompressiblePotential3D_Circulation.h
edit src/Discretization/Potential_Drela/IntegrandBoundaryFrame_CG_FP_Drela.h
edit src/Field/Element/ElementXFieldArea_Instantiate_2D_Cartesian.cpp
edit test/system/Asymptotic/ErrorOrder_2D_CG_Triangle_AD_btest.cpp
edit test/system/AnalyticSolve/AnalyticSolve2D_DGBR2_Triangle_NavierStokes_UniformStream_btest.cpp
edit src/Discretization/Potential_Drela/IntegrandBoundaryTrace_WakeCut_CG_FP_Drela.h
edit test/unit/Field/Element/RefCoordSolver_btest.cpp
edit src/Field/Element/ElementXFieldLine_Instantiate_2D.cpp
edit test/system/LocalSolve/LocalSolve2D_Split_DGBR2_Triangle_AD_Curvilinear_btest.cpp
edit test/system/LocalSolve/ElementLocalSolve3D_DGBR2_Tet_AD_btest.cpp
edit test/system/Asymptotic/ErrorOrder_1D_DGBR2_AD_BDF_btest.cpp
edit test/unit/Discretization/DG/IntegrandCell_DGBR2_AD_btest.cpp
edit test/system/Asymptotic/ErrorOrder_1D_DGAdvective_ShallowWater_btest.cpp
edit test/system/Asymptotic/ErrorEstimateOrder_2D_DGBR2_Triangle_AD_btest.cpp
edit test/unit/Field/Element/ElementProjection_L2_Tet_btest.cpp
edit src/PanelMethod/FunctionEvalQauxv_IBL_PiecewiseConstSourcePanel_FlatPlate3D.h
edit src/PanelMethod/XfoilPanelEquationSet.h
edit test/system/Asymptotic/ErrorOrder_1D_DGBR2_BuckleyLeverett_ST_btest.cpp
edit test/system/Asymptotic/ErrorOrder_2D_DGAdvective_Annulus_Quad_btest.cpp
edit test/unit/Field/Element/ElementXFieldLineBase_btest.cpp
edit test/unit/Field/XField/XField2D_Curvilinear_btest.cpp
edit test/system/Asymptotic/ErrorOrder_1D_HDG_AD_btest.cpp
edit src/pde/IBL/ElementProjectionOutputIBL3D.h
edit test/unit/Field/Element/ElementXFieldLine_1D_btest.cpp
edit src/Field/ProjectSoln/Project_DG_to_CG/Project_DG_to_CG_impl.h
edit test/system/Asymptotic/ErrorOrder_1D_DGBR2_TwoPhase_ST_btest.cpp
edit test/system/Asymptotic/ErrorOrder_1D_DGBR2_AD_HB_btest.cpp
edit src/pde/FullPotential/IntegrandFunctorBoundary3D_LIP_Vn2.h
edit test/system/Asymptotic/ErrorOrder_3D_CG_Tet_AD_btest.cpp
edit src/pde/IBL/ResidualCell_ProjectToQauxv.h
edit test/system/Asymptotic/ErrorOrder_1D_CG_AD_Bernstein_btest.cpp
edit test/system/AnalyticSolve/AnalyticSolve2D_DGAdvective_IBL_StagnationFlow_LamiBL_btest.cpp
edit test/system/LocalSolve/LocalSolve1D_Split_DGBR2_AD_btest.cpp
edit src/Discretization/LIP_HACK/IntegrandBoundaryTrace_Galerkin_Wall_IPTF.h
edit test/system/Asymptotic/ErrorOrder_4D_DG_Pentatope_btest.cpp
edit test/system/Asymptotic/Adjoint2D_CG_Triangle_AD_Bernstein_btest.cpp
edit src/Discretization/LIP_HACK/IntegrandBoundaryFrameTrace_Galerkin.h
edit src/Field/output_Tecplot/output_Tecplot_Boundary.h
edit test/unit/Discretization/Galerkin/IntegrandInteriorTrace_Galerkin_AD_btest.cpp
edit test/unit/Field/Element/ElementProjection_L2_Triangle_btest.cpp
edit src/Field/Element/ElementXFieldArea_Instantiate_3D_Cartesian.cpp
edit src/Discretization/Galerkin/ResidualBoundaryTrace_mitLG_Galerkin.h
edit src/pde/FullPotential/LinearizedIncompressiblePotential3D_Trefftz.h
edit test/system/CodeConsistency/Solve2D_Uncoupled_DGAdvectiveIBL_LamiBL_PTC_btest.cpp
edit test/system/Asymptotic/ErrorEstimateOrder_1D_DGBR2_Line_AD_btest.cpp
edit test/unit/Discretization/Galerkin/IntegrandCell_Galerkin_StrongForm_AD_btest.cpp
edit test/system/Asymptotic/ErrorOrder_2D_DGAdvective_Annulus_Triangle_btest.cpp
edit src/Field/Element/ElementXFieldSpacetime_Instantiate_4D_Cartesian.cpp
edit test/system/LocalSolve/EdgeLocalSolve2D_Dual_Galerkin_Stabilized_AR_btest.cpp
edit test/system/Asymptotic/ErrorOrder_2D_CG_Quad_AD_btest.cpp
edit test/system/Asymptotic/ErrorEstimateOrder_2D_CG_Triangle_RD_btest.cpp
edit src/Field/XField/XFieldArea_Traits.h
edit test/system/LocalSolve/EdgeLocalSolve2D_Primal_Galerkin_Stabilized_Triangle_AD_off.cpp
edit test/system/BlockSolve/Block_1D_Decoupled_AD_btest.cpp
edit src/Discretization/LIP_HACK/IntegrandFunctor_Galerkin_WakeCut_LIP.h
edit src/pde/HSM/PDEHSMKL.h
edit src/pde/FullPotential/FullPotential3D_Circulation.h
edit test/system/CodeConsistency/Curvilinear2D_VMSD_AD_btest.cpp
edit test/system/CodeConsistency/Solve2D_Uncoupled_DGAdvectiveIBLUniField_CorrelationClosure_LamiBL_btest.cpp
edit test/system/LocalSolve/ElementLocalSolve2D_DGBR2_Triangle_AD_btest.cpp
edit test/unit/Field/Element/ElementXFieldVolume_Hexahedron_btest.cpp
edit src/pde/IBL/IntegrandCell_ProjectToQauxv3D.h
edit test/system/AnalyticSolve/AnalyticSolve2D_DGAdvective_IBL_StagnationFlow_SingleElem_LamiBL_btest.cpp
edit src/Discretization/LIP_HACK/IntegrandInteriorTrace_Galerkin_WakeCut_IPTF.h
edit test/system/LocalSolve/LocalSolve2D_Split_DGBR2_Triangle_AD_AV_btest.cpp
edit test/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_IBL_Panel_btest.cpp
edit test/system/AnalyticSolve/AnalyticSolve2D_DGAdvective_IBLSplitAmpLag_StagnationFlow_LamiBL_btest.cpp
edit test/system/CodeConsistency/PDESourceOnly_Projection_btest.cpp
edit test/system/Asymptotic/Adjoint2D_HDG_Triangle_AD_mitState_btest.cpp
edit test/system/Asymptotic/Adjoint2D_HDG_Triangle_AD_sansLG_btest.cpp
edit test/system/Asymptotic/Adjoint2D_DGAdvective_Triangle_AD_btest.cpp
edit test/system/LocalSolve/LocalSolve1D_HDG_AD_btest.cpp
edit test/unit/Field/Element/ElementXFieldArea_2D_Triangle_btest.cpp
edit src/SolutionTrek/Continuation/PseudoTime/SetLocalTimeStep_VMSD.h
edit test/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBLFourEqn_Quad_btest.cpp
edit src/Discretization/LIP_HACK/IntegrandCell_Galerkin_Darmofal.h
edit test/system/LocalSolve/LocalSolve2D_HDG_Triangle_AD_btest.cpp
edit test/system/LocalSolve/Constrained_Solve_btest.cpp
edit src/Field/XField/XFieldVolume_Traits.h
edit test/system/LocalSolve/EdgeLocalSolve2D_Dual_Galerkin_Stabilized_AD_btest.cpp
edit test/unit/Field/Element/ElementXFieldAreaBase_Triangle_btest.cpp
edit src/Field/XField/XFieldTypes.h
edit test/system/Asymptotic/ErrorEstimateOrder_1D_HDG_Line_AD_btest_LGOFF.cpp
edit test/system/Asymptotic/ErrorEstimateOrder_2D_CG_Nodal_Triangle_AD_Bernstein_btest.cpp
edit src/Discretization/LIP_HACK/IntegrandInteriorTrace_Galerkin_WakeCut_LIP_SRA.h
edit test/system/AnalyticSolve/AnalyticSolve2D_HDG_Triangle_NavierStokes_UniformStream_btest.cpp
edit test/unit/Field/Field_Tuple_btest.cpp
edit src/Discretization/LIP_HACK/IntegrandFunctor_Galerkin_WakeCut_sansLG.h
edit src/Discretization/Potential_Adjoint/IntegrandBoundaryFrame_CG_LIP_Adjoint.h
edit src/Discretization/LIP_HACK/IntegrandBoundaryFrame_Galerkin_Circ.h
edit src/Discretization/Potential_Adjoint/IntegrandBoundaryTrace_WakeCut_CG_LIP_Adjoint.h
edit test/unit/Field/Element/ElementXFieldAreaBase_Quad_btest.cpp
edit test/system/Asymptotic/ErrorOrder_1D_CG_AD_btest.cpp
edit test/system/CodeConsistency/Solve2D_Coupled4x4_IBL_Panel_NACA0004_FittedTransition_TwoLayerNewton_btest.cpp
edit src/Field/ElementCounter.h
edit src/pde/HSM/PDEHSM2D.h
edit test/system/Asymptotic/ErrorOrder_2D_DGBR2_Triangle_AD_Bernstein_btest.cpp
edit src/Discretization/DG/DiscretizationDGBR2.cpp
edit test/system/LocalSolve/EdgeLocalSolve3D_Dual_Galerkin_Stabilized_AD_btest.cpp
edit test/system/Asymptotic/Solve2D_DGAdvective_LinearRobin_mitLG_sansLG_Consistency_AD_btest.cpp
edit test/system/Asymptotic/ErrorOrder_2D_DGBR2_Triangle_AD_btest.cpp
edit src/Field/DistanceFunction/DistanceSolver.cpp
edit src/pde/IBL/JacobianCellParam_ProjectToQauxv.h
edit test/system/Adaptation/SolverInterface_DGBR2_btest.cpp
edit src/Discretization/LIP_HACK/IntegrandBoundaryTrace_Galerkin_WakeCut_LIP_SRA.h
edit test/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_HubtraceHDGAdvIBL_CutCellNaturalTransition_Panel_btest.cpp
edit src/Field/XField/XField_checkTraceNormal_impl.h
edit src/Field/output_Tecplot/output_Tecplot_PDE.h
edit test/system/LocalSolve/LocalSolve3D_HDG_Tet_AD_btest.cpp
edit test/system/Asymptotic/Adjoint2D_DGBR2_Triangle_AD_btest.cpp
edit src/Discretization/HDG/AWIntegrandBoundaryFunctor_HDG.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Local_Project.h
edit src/Field/ProjectSoln/ProjectGlobalField/ProjectGlobalField_impl.h
edit src/OutputFunctional/IntegrandBoundaryTrace_LagrangeMultiplier.h
edit test/unit/Field/Element/ElementProjection_L2_Line_btest.cpp
edit test/unit/Field/DistanceFunction_btest.cpp
edit test/system/LocalSolve/LocalSolve3D_Split_HDG_Tet_AD_btest.cpp
edit test/unit/Discretization/Galerkin/IntegrandCell_Galerkin_ShallowWater1D_btest.cpp
edit test/system/Asymptotic/ErrorEstimateOrder_1D_CG_Line_AD_btest.cpp
edit src/Discretization/Potential_Drela/IntegrandBoundaryFrame_CG_LIP_Drela.h
edit src/Field/Field_DG/FieldVolume_DG_BoundaryTrace_matchAreaCell.h
edit src/Field/XField/XFieldLine_Instantiate_2D.cpp
edit src/Field/Element/ElementXFieldVolume_Instantiate_3D_Cartesian.cpp
edit src/Adaptation/MOESS/CostModel_LogEuclidean/CostModel_LogEuclidean_impl.h
edit test/system/Asymptotic/ErrorOrder_2D_L2Project_Bernstein_btest.cpp
edit src/Discretization/LIP_HACK/IntegrandFunctorCell_Galerkin_Kutta_LIP.h
edit test/system/Asymptotic/ErrorOrder_3D_DGBR2_Periodic_Hex_AD_btest.cpp
edit test/system/LocalSolve/EdgeLocalSolve2D_Primal_DGBR2_Triangle_AD_off.cpp
edit src/ErrorEstimate/ErrorEstimate_L2.h
edit src/Field/XField/XFieldLine_Traits.h
edit test/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Triangle_btest.cpp
edit test/system/Asymptotic/Adjoint1D_DGBR2_BuckleyLeverett_ST_btest.cpp
edit src/Field/Field_DG/FieldVolume_DG_BoundaryTrace_matchAreaCell_impl.h
edit test/unit/Discretization/Galerkin/IntegrandCell_Galerkin_PTC_AD_btest.cpp
edit src/Field/Element/ElementXFieldVolume_Instantiate_4D_Cartesian.cpp
edit src/Field/FieldTypes.h
edit test/unit/Field/Element/ElementXFieldSpacetime_Pentatope_btest.cpp
edit src/Field/Element/RefCoordSolver.cpp
edit test/system/AnalyticSolve/AnalyticSolve2D_HDG_Triangle_NavierStokes_btest.cpp
edit test/system/LocalSolve/EdgeLocalSolve2D_Dual_Galerkin_Stabilized_Euler_btest.cpp
edit test/unit/Discretization/DG/IntegrandCell_DGBR2_CR_btest.cpp
edit test/system/Asymptotic/ErrorOrder_2D_DGAdvective_Circle_Line_ShallowWater_btest.cpp
edit test/unit/Field/Element/ElementProjection_Specialization_L2_Triangle_btest.cpp
edit test/system/AnalyticSolve/AnalyticSolve3D_IBL3D_StagnationFlow_LamiBL_Triangle_btest.cpp
edit test/unit/Discretization/Block/AlgebraicEquationSet_Block3x3_Auxv_Auxi_IBL_Quad_btest.cpp
edit src/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_FP_HACK.h
edit test/system/Asymptotic/ErrorEstimateOrder_2D_CG_Nodal_Triangle_AD_btest.cpp
edit src/Field/NormalField/NormalField_Volume.cpp
edit test/system/Asymptotic/AWErrorEst_2D_HDG_Triangle_AD_btest_LGOFF.cpp
edit test/system/LocalSolve/ElementLocalSolve3D_DGAdvective_Tet_AD_btest.cpp
edit test/unit/Field/Element/ElementTuple_btest.cpp
edit test/system/Asymptotic/ErrorOrder_2D_DGAdvective_Circle_Line_AD_btest.cpp
edit src/Discretization/LIP_HACK/IntegrandBoundaryTrace_LinearScalar_sansLG_Galerkin_LIP_HACK.h
edit test/system/Asymptotic/ErrorOrder_2D_DGAdvective_Flat_Line_AD_btest.cpp
edit test/unit/Discretization/Galerkin/StabilizationMatrix_NS_btest.cpp
edit test/unit/Discretization/Block/AlgebraicEquationSet_Block4x4_Auxv_Auxi_CutCellForcedTransitionIBL_Panel_btest.cpp
edit src/tools/SANSnumerics.h
edit src/pde/IBL/IntegrandCell_ProjectToQauxi.h
edit src/Field/DistanceFunction/DistanceFunction.cpp
edit src/Field/Element/ElementXFieldLine_Instantiate_2D_Cartesian.cpp
edit test/system/Asymptotic/ErrorOrder_3D_DGBR2_Sphere_Triangle_AD_btest.cpp

added simplified form of d(y)/d(phi) for ray path (linear temperature layer)

by allmaras

edit src/pde/sansBOOM/RayPath.h

added parameters pwFilename and glfFilename to Pointwise PyDict

by allmaras

edit src/Meshing/Pointwise/MesherInterface_Pointwise.h
edit test/unit/Meshing/Pointwise/Write_PointwisePCD_btest.cpp
edit src/Meshing/Pointwise/MesherInterface_PointwiseParams.cpp
edit test/unit/Meshing/Pointwise/MesherInterface_Poitwise_btest.cpp

made inviscid Joukowski case consistent with pwFilename/glfFilename Pointwise PyDict parameters

by allmaras

edit test/sandbox/Adapt2D_DGAdvective_Euler_Joukowski_Pointwise_toy.cpp

added pwFilename for Pointwise PyDict parameter

by allmaras

edit test/sandbox/Adapt2D_L2Project_MOESS_toy.cpp

more pwFilename Pointwise param changes for 3D L2 projection

by allmaras

edit test/sandbox/Adapt3D_L2Project_MOESS_toy.cpp

relaxed tolerance on area test for raypath

by allmaras

edit test/unit/pde/sansBOOM/RayPath_btest.cpp

relaxed tolerance on test for DG-to-CG projection

by allmaras

edit test/unit/Field/Project_DG_to_CG_btest.cpp

Updates to RotorSource viscous losses

by galbramc

edit src/Field/NormalField/DeltaRef/ProjectDeltaRef.cpp
edit src/pde/NS/PDEEuler3D_RotorSource.h
edit test/unit/pde/NS/PDEEulermitAVDiffusion3D_RotorSource_btest.cpp
edit test/unit/pde/NS/PDEEuler3D_RotorSource_btest.cpp
edit src/Meshing/EGADS/RotorSource/Rotor.h

Update RotorSource viscous formulation. Update build for avro.

by galbramc

edit src/Meshing/EGADS/RotorSource/Rotor.h
edit CMakeInclude/Builds/BuildAVRO.cmake
edit src/Field/output_Tecplot/output_Tecplot_RotorSource.cpp
edit test/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cpp
edit src/pde/NS/PDEEuler3D_RotorSource.h
edit src/Meshing/EGADS/RotorSource/Rotor.cpp
edit test/unit/pde/NS/PDEEuler3D_RotorSource_btest.cpp
edit test/unit/pde/NS/PDEEulermitAVDiffusion3D_RotorSource_btest.cpp

Forgot a file

by galbramc

edit src/UserInterfaces/BodyForceSolver_impl.h

Re-enable BodyForce constrained solver

by galbramc

edit src/UserInterfaces/BodyForceSolver_impl.h

XField includes for meshing

by allmaras

edit src/Meshing/avro/MesherInterface_Wake_avro.h
edit src/Meshing/refine/XField_refine.cpp
edit src/Meshing/avro/XField3D_Wake_avro.h
edit src/Meshing/TetGen/EGTetGen.cpp
edit src/Meshing/AFLR/AFLR3.cpp
edit src/Meshing/avro/MesherInterface_avro_4D.cpp
edit src/Meshing/avro/MesherInterface_avro_3D.cpp
edit src/Meshing/avro/XField_avro_4D.cpp
edit src/Meshing/avro/XField_avro.h
edit src/Meshing/avro/XField_avro_3D.cpp
edit src/Meshing/avro/MesherInterface_Wake_avro.cpp
edit src/Meshing/avro/XField_avro_2D.cpp
edit src/Meshing/EGTess/EGTriangle.cpp
edit src/Meshing/avro/MesherInterface_avro_2D.cpp

XField includes for meshing: missed one

by allmaras

edit src/Meshing/EGTess/EGTessModel_aflr4.cpp

XField includes for CAPS user interface

by allmaras

edit src/UserInterfaces/capsAIM/capsMesh.h
edit src/UserInterfaces/capsAIM/capsMesh.cpp

more XField includes

by allmaras

edit src/UserInterfaces/capsAIM/capsMesh.cpp

more XField includes

by allmaras

edit src/Adaptation/MOESS/TAO/ImpliedMetric_Optimizer_TAO/ImpliedMetric_Optimizer_TAO_4D.cpp
edit src/Adaptation/MOESS/TAO/ImpliedMetric_Optimizer_TAO/ImpliedMetric_Optimizer_TAO_2D.cpp
edit src/Meshing/AFLR/AFLR2.cpp
edit test/unit/Adaptation/MOESS/TAO/MOESS_SANS_Optimizer_TAO_btest.cpp
edit test/unit/Adaptation/MOESS/TAO/ImpliedMetric_Optimizer_TAO_btest.cpp
edit src/Adaptation/MOESS/TAO/ImpliedMetric_Optimizer_TAO/ImpliedMetric_Optimizer_TAO_3D.cpp
edit src/Adaptation/MOESS/TAO/ImpliedMetric_Optimizer_TAO/ImpliedMetric_Optimizer_TAO_1D.cpp

more Field includes

by allmaras

edit src/UserInterfaces/output_Tecplot_SA_CG.cpp
edit src/UserInterfaces/BodyForceSolver_impl.h

DistanceFunction template arguments for BodyForceSolver

by allmaras

edit src/UserInterfaces/BodyForceSolver_impl.h

more XField includes

by allmaras

edit src/Adaptation/MOESS/TAO/MOESS_SANS_Optimizer_TAO/MOESS_SANS_Optimizer_TAO_3D.cpp
edit src/Adaptation/MOESS/TAO/MOESS_SANS_Optimizer_TAO/MOESS_SANS_Optimizer_TAO_4D.cpp
edit src/Adaptation/MOESS/TAO/MOESS_SANS_Optimizer_TAO/MOESS_SANS_Optimizer_TAO_1D.cpp
edit src/Adaptation/MOESS/TAO/MOESS_SANS_Optimizer_TAO/MOESS_SANS_Optimizer_TAO_2D.cpp

missing Axes template in AlgebraicEquationSet_Debug for sandbox codes,

by allmaras

edit test/unit/pde/FullPotential/CMakeLists.txt
edit test/sandbox/Solve3D_CG_LIP_KuttaHACK_toy.cpp
edit test/sandbox/Solve2D_CG_NACA_IPTF_toy.cpp
edit src/UserInterfaces/capsAIM/sansLIPAIM.cpp

Add dumpTecplotBodyForce to BodyForceSolver

by galbramc

edit src/UserInterfaces/BodyForceSolver.h
edit CMakeInclude/Finds/FindAVRO.cmake
edit src/Field/output_Tecplot/output_Tecplot_RotorSource.cpp
edit src/Field/output_Tecplot_Boundary.h
edit src/UserInterfaces/BodyForceSolver_impl.h

separate definitions needed for static const',s in structs/classes (there

by allmaras

edit src/pde/FullPotential/BCLinearizedIncompressiblePotential3D.cpp

removed troublesome sandbox cases from no-compile list, now list is back

by allmaras

edit CMakeLists.txt

reconciled undefined references (mostly new libraries due to re-org of Field directory)

by allmaras

edit test/unit/Field/CMakeLists.txt
edit test/system/CodeConsistency/CMakeLists.txt
edit test/system/Adaptation/CMakeLists.txt
edit test/unit/UnitGrids/CMakeLists.txt
edit src/UserInterfaces/capsAIM/CMakeLists.txt
edit test/unit/Field/Local/CMakeLists.txt
edit test/system/AnalyticSolve/CMakeLists.txt
edit test/system/Asymptotic/CMakeLists.txt
edit test/unit/ErrorEstimate/CMakeLists.txt
edit test/unit/UserInterfaces/CMakeLists.txt
edit test/unit/Adaptation/MOESS/CMakeLists.txt
edit test/unit/Discretization/Block/CMakeLists.txt
edit test/system/BlockSolve/CMakeLists.txt
edit test/system/LocalSolve/CMakeLists.txt

Forgot a file and fix a warning

by galbramc

edit src/UserInterfaces/BodyForceSolver_impl.h
edit src/UserInterfaces/PythonUI/PySANS_BodyForce.cpp

One more warning fix

by galbramc

edit src/UserInterfaces/BodyForceSolver_impl.h

more reconciling library dependencies, XField includes

by allmaras

edit test/unit/pde/FullPotential/CMakeLists.txt
edit src/UserInterfaces/PythonUI/PySANS_NS_NACA0012.cpp

reconcile undefined references in sandbox cases

by allmaras

edit CMakeLists.txt

reconciling undefined XField references

by allmaras

edit test/unit/Field/XField/CMakeLists.txt
edit test/unit/Field/XField/Local/CMakeLists.txt

added MPI fixture to all Field subdirectory unit tests

by allmaras

edit test/unit/Field/Local/CMakeLists.txt
edit test/unit/Field/Field_CG/CMakeLists.txt
edit test/unit/Field/Field_DG/CMakeLists.txt
edit test/unit/Field/XField/Local/CMakeLists.txt
edit test/unit/Field/Element/CMakeLists.txt
edit test/unit/Field/HField/CMakeLists.txt
edit test/unit/Field/XField/CMakeLists.txt
edit test/unit/Field/Field_EG/CMakeLists.txt

WAG (since I can',t recreate the problem locally): included XField_impl.h

by allmaras

edit src/Field/Field_CG/Constructor/Field_CG_CellConstructorVolume.cpp

oops: got to get the correct include directory...

by allmaras

edit src/Field/Field_CG/Constructor/Field_CG_CellConstructorVolume.cpp

reconcile undefined references

by allmaras

edit test/unit/Discretization/Galerkin/CMakeLists.txt

reconcile undefined references

by allmaras

edit test/unit/Discretization/VMSDBR2/CMakeLists.txt

added spaces, just something to make a new commit

by allmaras

edit test/sandbox/Solve2D_CG_NACA_IPTF_toy.cpp

Add radial coefficients for body force viscous dissipation

by galbramc

edit test/unit/pde/NS/PDEEulermitAVDiffusion3D_RotorSource_btest.cpp
edit test/unit/pde/NS/PDEEuler3D_RotorSource_btest.cpp
edit src/pde/NS/PDEEuler3D_RotorSource.h
edit src/Field/Element/CMakeLists.txt
edit src/Field/output_Tecplot/output_Tecplot_RotorSource.cpp

Forgot a file and fix a warning

by galbramc

edit src/Field/output_Tecplot/output_Tecplot_RotorSource.cpp
edit src/UserInterfaces/BodyForceSolver_impl.h

Forgot more files

by galbramc

edit src/Meshing/EGADS/RotorSource/Rotor.h
edit src/Meshing/EGADS/RotorSource/Rotor.cpp

Forgot to update a test

by galbramc

edit test/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cpp

Fix body force convergence tolerance specification

by galbramc

edit src/UserInterfaces/BodyForceSolver_impl.h

Add TtRel output for body forces

by galbramc

edit src/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.h
edit src/pde/NS/OutputEuler3D.h

Axisymmetric AD capabilities modified and added

by cwomack

edit test/unit/pde/AnalyticFunction/ScalarFunction2D_btest.cpp
edit src/pde/AdvectionDiffusion/ViscousFlux2D.h
edit src/Discretization/Galerkin/Stabilization_Galerkin.h
edit test/sandbox/Adapt2D_VMSDBR2_AD_DoubleBoundaryLayer_toy.cpp
edit test/unit/IO/pde/ScalarFunction2D_pattern.txt
edit src/Meshing/avro/XField_avro.h
edit test/sandbox/Adapt2D_Galerkin_Stabilized_AD_DoubleBoundaryLayer_toy.cpp
edit src/pde/AnalyticFunction/ScalarFunction2D.cpp
edit src/pde/AnalyticFunction/ScalarFunction2D.h
edit test/sandbox/Adapt2D_DGBR2_AD_DoubleBoundaryLayer_toy.cpp
edit test/sandbox/Adapt2D_Galerkin_Stabilized_AD_AxiSymDoubleBoundaryLayer_toy.cpp
edit test/unit/pde/AdvectionDiffusion/ViscousFlux2D_btest.cpp

Added new axisymmetric output functionals

by cwomack

add test/unit/pde/OutputCell_WeightedSolution_Axisym_btest.cpp
add src/pde/OutputCell_WeightedSolution_Axisym.h

Dump body force information on interior groups

by galbramc

edit src/Field/output_Tecplot/output_Tecplot_RotorSource.cpp

Fix last commit

by galbramc

edit src/Field/output_Tecplot/output_Tecplot_RotorSource.cpp

Fixed vera error

by cwomack

edit src/pde/AnalyticFunction/ScalarFunction2D.h
edit src/Discretization/Galerkin/Stabilization_Galerkin.h
edit src/Meshing/avro/XField_avro.h

added specified velocity to adiabatic and isothermal NS BCs,

by allmaras

edit src/pde/NS/BCNavierStokes2D.cpp
edit test/sandbox/Solve2D_CGStabilized_Triangle_RANSSA_Joukowski_toy.cpp
edit src/pde/NS/BCNavierStokes3D_Robin_sansLG.h
edit test/unit/pde/NS/BCRANSSA3D_mitState_btest.cpp
edit test/unit/pde/NS/BCNavierStokes2D_Robin_sansLG_btest.cpp
edit test/sandbox/Solve3D_VMSDBR2_BlottnerSphere_AV_HTC_toy.cpp
edit test/sandbox/Solve2D_HDG_Triangle_RANSSA_Joukowski_toy.cpp
edit test/sandbox/Solve2D_DGBR2_Triangle_RANSSA_Joukowski_toy.cpp
edit test/sandbox/Adapt2D_VMSDBR2_NavierStokes_Blottner_Mach20_AV_HTC_toy.cpp
edit test/sandbox/Adapt3D_DGBR2_NavierStokes_DeltaWing_MultiScaleMetric_toy.cpp
edit test/sandbox/Adapt3D_VMSD_NavierStokes_DeltaWing_FixDOF_toy.cpp
edit src/pde/NS/BCNavierStokes2D.h
edit test/unit/IO/pde/NS/BCNavierStokes2D_pattern.txt
edit test/sandbox/Adapt3D_DGBR2_NavierStokes_DeltaWing_Chain_toy.cpp
edit test/unit/pde/NS/BCNavierStokes2D_btest.cpp
edit test/sandbox/Adapt2D_Galerkin_Stabilized_RANSSA_Joukowski_toy.cpp
edit test/sandbox/Adapt3D_DGBR2_NavierStokes_DeltaWing_FixDOF_toy.cpp
edit test/sandbox/Adapt3D_VMSD_NavierStokes_DeltaWing_Chain_toy.cpp
edit test/sandbox/Adapt3D_DGBR2_NavierStokes_DeltaWing_toy.cpp
edit test/sandbox/Adapt2D_VMSDBR2_RANSSA_Supersonic_AV_HTC_toy.cpp
edit src/pde/NS/BCNavierStokes3D.cpp
edit test/unit/pde/NS/BCNavierStokes3D_Robin_sansLG_btest.cpp
edit test/unit/pde/NS/BCNavierStokes3D_mitState_btest.cpp
edit src/pde/NS/BCNavierStokes3D_mitState.h
edit test/sandbox/Adapt2D_DGBR2_NavierStokes_FlatPlate_LikelihoodSweep_toy.cpp
edit test/sandbox/Adapt2D_VMSDBR2_RANSSA_Subsonic_IsoFlatPlate_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_NavierStokes_FlatPlate_MCMC_toy.cpp
edit test/unit/IO/pde/NS/BCNavierStokes2D_Robin_sansLG_pattern.txt
edit test/sandbox/Adapt3D_VMSD_NavierStokes_DeltaWing_toy.cpp
edit test/sandbox/Solve3D_VMSDBR2_NavierStokes_Sduct_toy.cpp
edit src/pde/NS/BCNavierStokes2D_Robin_sansLG.h
edit test/sandbox/Adapt2D_DGBR2_RANSSA_Joukowski_toy.cpp
edit test/sandbox/Adapt3D_VMSDBR2_NavierStokes_DeltaWing_Chain_toy.cpp

Fixed vera errors

by cwomack

edit test/unit/pde/AnalyticFunction/ScalarFunction2D_btest.cpp
edit test/sandbox/Adapt2D_Galerkin_Stabilized_AD_AxiSymDoubleBoundaryLayer_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_AD_DoubleBoundaryLayer_toy.cpp

Tq, Tg parameters for BC normal flux

by allmaras

edit src/pde/NDConvert/BCNDConvertSpace2D.h

added quadratureOrder() member function

by allmaras

edit src/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_Stabilized.h

added UseSchurComplement template parameter for globally constrained systems

by allmaras

edit src/LinearAlgebra/AlgebraicEquationSetBase_GloballyConstrained.h
edit src/LinearAlgebra/NonZeroPatternType.h
edit src/LinearAlgebra/MatrixSizeType.h
edit src/LinearAlgebra/AlgebraicEquationSetBase.h
edit src/LinearAlgebra/VectorType.h

add 2nd option for globally constrained AES that uses a direct global solve

by allmaras

edit src/LinearAlgebra/AlgebraicEquationSet_Traits.h

compile-time check &, dump of types

by allmaras

add src/tools/WhichType.h

Add more output functionals for RotorSource

by galbramc

edit src/pde/NS/OutputEuler3D.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.h
edit src/pde/NS/OutputEuler2D.h

Add vera exclusion

by galbramc

edit scripts/vera/exclusions.txt

Fixed vera errors

by cwomack

edit src/Meshing/avro/XField_avro.h
edit test/sandbox/Adapt2D_Galerkin_Stabilized_AD_DoubleBoundaryLayer_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_AD_DoubleBoundaryLayer_toy.cpp
edit test/sandbox/Adapt2D_VMSDBR2_AD_DoubleBoundaryLayer_toy.cpp

added 2D triangle test for VMSD-BR2 cell integrand and residual, including VectorD<,ArrayQ>, interfaces

by allmaras

edit test/unit/Discretization/VMSDBR2/JacobianCell_VMSD_BR2_AD_btest.cpp
edit test/unit/Discretization/VMSDBR2/IntegrandCell_VMSD_BR2_AD_btest.cpp

Add PtRot and Kr3 for body forces

by galbramc

edit test/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cpp
edit test/unit/pde/NS/PDEEulermitAVDiffusion3D_RotorSource_btest.cpp
edit src/Meshing/EGADS/RotorSource/Rotor.cpp
edit src/Meshing/EGADS/RotorSource/Rotor.h
edit test/unit/pde/NS/PDEEuler3D_RotorSource_btest.cpp
edit src/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.h
edit src/pde/NS/PDEEuler3D_RotorSource.h
edit src/UserInterfaces/BodyForceSolver_impl.h

Jenkins script fix

by galbramc

edit scripts/jenkins/SANS_Commit.sh
edit src/pde/NS/SolutionFunction_RANSSA3D.h
edit src/pde/NS/SolutionFunction_RANSSA3D.cpp

Remove all of ntref from RANSSA. Add 3D SA-R term.

by galbramc

edit src/pde/NS/QRANSSA3D.h
edit test/unit/pde/NS/PDERANSSA3D_btest.cpp
edit src/pde/NS/PDERANSSA3D.h
edit src/pde/NS/PDERANSSA2D.h
edit test/unit/pde/NS/PDEEulermitAVDiffusion2D_RANSSA_btest.cpp
edit test/unit/pde/NS/PDERANSSA2D_btest.cpp

Fix compile errors and upgrade NLOPT to 2.7.1

by galbramc

edit CMakeInclude/Builds/BuildNLOPT.cmake
edit test/sandbox/Solve3D_VMSDBR2_RANSSA_OjedaMMS_toy.cpp
edit test/sandbox/Solve3D_VMSD_RANSSA_OjedaMMS_toy.cpp
edit test/sandbox/Solve2D_DGBR2_Triangle_NavierStokes_OjedaMMS_toy.cpp
edit test/sandbox/Solve3D_DGBR2_RANSSA_OjedaMMS_toy.cpp
edit test/sandbox/Solve3D_Galerkin_Stabilized_RANSSA_OjedaMMS_toy.cpp

Another compile fix

by galbramc

edit test/sandbox/Solve3D_DGBR2_RANSSA_OjedaMMS_toy.cpp

More compile fixes

by galbramc

edit test/sandbox/Solve3D_VMSDBR2_RANSSA_OjedaMMS_toy.cpp
edit test/sandbox/Solve3D_Galerkin_Stabilized_RANSSA_OjedaMMS_toy.cpp
edit test/sandbox/Solve3D_VMSD_RANSSA_OjedaMMS_toy.cpp

added 2D FieldWeighted integrand/integral tests for VMSD-BR2

by allmaras

edit test/unit/Discretization/VMSDBR2/IntegrandCell_VMSD_BR2_AD_btest.cpp

modifications to VMSD-BR2 needed for global constraints

by allmaras

edit src/Discretization/VMSDBR2/AlgebraicEquationSet_VMSD_BR2.h
edit src/Discretization/VMSDBR2/ResidualInteriorTrace_VMSD_BR2.h
add src/Discretization/VMSDBR2/ResidualParamSensitvity_VMSD_BR2.h
edit src/Discretization/VMSDBR2/ResidualCell_VMSD_BR2.h
edit src/Discretization/VMSDBR2/ResidualInteriorTrace_onBoundary_VMSD_BR2.h
edit src/Discretization/VMSDBR2/IntegrandTrace_VMSD_BR2.h
edit src/Discretization/VMSDBR2/IntegrandCell_VMSD_BR2.h

instantiations needed for global constraints without Schur complement solve (i.e. direct solve on flattened matrix)

by allmaras

edit src/LinearAlgebra/SparseLinAlg/Direct/MKL_PARDISO/MKL_PARDISOSolver.h
edit src/LinearAlgebra/SparseLinAlg/Direct/UMFPACK/UMFPACKSolver.h
edit src/LinearAlgebra/SparseLinAlg/Direct/UMFPACK/UMFPACKSolver_MatrixBlock_2x2_Instantiate.cpp
edit src/LinearAlgebra/SparseLinAlg/Krylov/FGMRES_MatrixBlock_2x2_Instantiate.cpp
edit src/LinearAlgebra/DenseLinAlg/StaticSize/MatrixS_InverseLUP_Surreal_Instantiate.cpp
edit src/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver.h
edit src/LinearAlgebra/DenseLinAlg/StaticSize/MatMul/MatrixS_MatMul_Native_Surreal_Instantiate.cpp
edit src/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_MatrixBlock_2x2_Instantiate.cpp
edit src/LinearAlgebra/DenseLinAlg/StaticSize/MatrixS_Decompose_LUP_Surreal_Instantiate.cpp
edit src/LinearAlgebra/SparseLinAlg/Direct/MKL_PARDISO/MKL_PARDISOSolver_MatrixBlock_2x2_Instantiate.cpp
edit src/NonLinearSolver/LineUpdate/HalvingSearchLineUpdate_MatrixBlock_2x2_Instantiate.cpp
edit src/NonLinearSolver/NewtonSolver_MatrixBlock_2x2_Instantiate.cpp

modifications needed for global constraints with direct solve of flattened global matrix

by allmaras

edit src/LinearAlgebra/SparseLinAlg/ScalarMatrix_CRS.h
edit src/LinearAlgebra/SparseLinAlg/WriteMatrixMarketFile.h
edit src/LinearAlgebra/SparseLinAlg/ScalarVector.h
edit src/LinearAlgebra/DenseLinAlg/DynamicSize/MatrixD_Mul.h
edit src/LinearAlgebra/SparseLinAlg/ScalarMatrix_CRS_impl.h
edit src/LinearAlgebra/SparseLinAlg/ScalarMatrix_CRS_int.cpp
edit src/LinearAlgebra/SparseLinAlg/ScalarVector_impl.h
edit src/Discretization/Galerkin/FunctionalCell_Galerkin.h

added matrix write during initialization

by allmaras

edit src/LinearAlgebra/SparseLinAlg/Direct/UMFPACK/UMFPACKSolver_factorize.h

compressible lid-driven cavity flow with global mass constraint (stabilized CG and VMSD-BR2)

by allmaras

add test/sandbox/Solve2D_VMSDBR2_Triangle_NavierStokes_DrivenCavity_MassConstraint_toy.cpp
add test/sandbox/Solve2D_CGStabilized_Triangle_NavierStokes_DrivenCavity_MassConstraint_toy.cpp

Add error functions erf and erfc to Surreal

by galbramc

edit src/Surreal/SurrealS_Trad.h
edit test/unit/Surreal/SurrealD4_btest.cpp
edit test/unit/Surreal/SurrealD1_btest.cpp
edit test/unit/Surreal/SurrealS4_btest.cpp
edit src/Surreal/SurrealS_Lazy.h
edit src/Surreal/SurrealD_Trad.h
edit test/unit/Surreal/SurrealS1_btest.cpp
edit src/Surreal/SurrealD_Lazy.h

Corrections for intel

by galbramc

edit test/unit/Surreal/SurrealS4_btest.cpp
edit src/Surreal/SurrealD_Trad.h
edit test/unit/Surreal/SurrealD1_btest.cpp
edit src/Surreal/SurrealS_Trad.h
edit test/unit/Surreal/SurrealD4_btest.cpp
edit src/Surreal/SurrealD_Lazy.h
edit src/Surreal/SurrealS_Lazy.h
edit test/unit/Surreal/SurrealS1_btest.cpp

Add tolerance for intel error function Surreal tests

by galbramc

edit test/unit/Surreal/SurrealS4_btest.cpp
edit test/unit/Surreal/SurrealD1_btest.cpp
edit test/unit/Surreal/SurrealD4_btest.cpp
edit test/unit/Surreal/SurrealS1_btest.cpp

added back in a 3-parameter template for FunctionalCell_Galerkin_impl

by allmaras

edit src/Discretization/Galerkin/FunctionalCell_Galerkin.h

vera line length squawk

by allmaras

edit test/sandbox/Solve2D_VMSDBR2_Triangle_NavierStokes_DrivenCavity_MassConstraint_toy.cpp

added differential multiplier (r in r*dr*dz for Axisymmetric) to all ElementXFields

by allmaras

edit src/Field/Element/CMakeLists.txt
add src/Field/Element/ElementXFieldArea_Instantiate_2D_Axisymmetric.cpp
add src/Field/Element/ElementXFieldNode_Instantiate_Axisymmetric.cpp
add test/unit/Field/Element/ElementXFieldNode_Cartesian_btest.cpp
edit src/Field/Element/ElementXFieldSpacetime_Instantiate_4D_Cartesian.cpp
add src/Field/Element/ElementXFieldNode_Instantiate_Cartesian.cpp
edit src/Field/Element/ElementXFieldVolume_Instantiate_4D_Cartesian.cpp
add src/Field/Element/ElementXFieldLine_Instantiate_Cartesian.cpp
edit src/Field/Element/ElementXFieldLine_Instantiate_2D_Cartesian.cpp
edit src/Field/Element/ElementXFieldVolume_Instantiate_3D_Cartesian.cpp
edit test/unit/Field/Element/ElementXFieldLineBase_btest.cpp
edit src/Field/Element/ElementXFieldArea.h
edit src/Field/Element/ElementXFieldArea_impl.h
edit src/Field/Element/ElementXFieldLine.h
delete src/Field/Element/ElementXFieldLine_Instantiate_2D.cpp
add src/Field/Element/ElementXFieldLine_Instantiate_2D_Axisymmetric.cpp
edit src/Field/Element/ElementXFieldSpacetime.h
add src/Field/Element/ElementXFieldLineBase_Instantiate_2D.cpp
add test/unit/Field/Element/ElementXFieldNode_Axisymmetric_btest.cpp
edit src/Field/Element/ElementXFieldNode.h
edit src/Field/Element/ElementXFieldArea_Instantiate_2D_Cartesian.cpp
add src/Field/Element/ElementXFieldLine_Instantiate_1D_Cartesian.cpp
add src/Field/Element/ElementXFieldLine_Instantiate_3Dand4D_Cartesian.cpp
edit src/Field/Element/ElementXFieldArea_Instantiate_3D_Cartesian.cpp
edit src/Field/Element/ElementXFieldVolume.h

incorporated differential weight (r in r*dr*dz for Axisymmetric) to all integrals

by allmaras

edit test/unit/Field/Element/ElementIntegral_Functional_btest.cpp
edit src/Field/Element/ElementIntegral.h
edit src/Field/Function/WeightedFunctionIntegral.h
edit src/ErrorEstimate/ErrorEstimate_Common.h
edit src/Field/Element/ElementProjection_L2.h
edit src/Discretization/DG/JacobianDetInvResidualNorm.h
edit src/Field/HField/HField_DG/HField_DG_impl.h
add test/unit/Field/Element/ElementProjection_L2_Triangle_Axisymmetric_btest.cpp
edit src/Field/Element/ElementProjection_Specialization_L2.h
edit src/Field/Function/FunctionIntegral.h
edit src/Field/Element/GalerkinWeightedIntegral.h
add test/unit/Field/Element/ElementIntegral_Functional_Axisymmetric_btest.cpp
edit src/Field/Element/ElementalMassMatrix.h
edit src/Field/Element/GalerkinWeightedIntegral_New.h

Make camberlines constant radius for RotorSource. Other rotor source fixes.

by galbramc

edit src/Field/output_Tecplot/output_Tecplot_RotorSource.cpp
edit src/Meshing/EGADS/RotorSource/Rotor.h
edit src/Meshing/EGADS/RotorSource/CamberBlade.cpp
edit src/Meshing/EGADS/RotorSource/Rotor.cpp
edit test/unit/Meshing/EGADS/CamberBlade_btest.cpp
edit src/Meshing/EGADS/RotorSource/QuadCamber.cpp
edit src/Meshing/EGADS/RotorSource/CubicCamber.cpp
edit src/pde/NS/PDEEuler3D_RotorSource.h
edit src/UserInterfaces/BodyForceSolver_impl.h
edit test/unit/pde/NS/PDEEuler3D_RotorSource_btest.cpp
edit test/unit/pde/NS/PDEEulermitAVDiffusion3D_RotorSource_btest.cpp
edit external/avro_tar.sh
edit src/Discretization/Galerkin/AlgebraicEquationSet_Rotor_GlobalConstraint.h
edit src/Meshing/EGADS/RotorSource/CamberBlade.h
edit test/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cpp

Undo file rename

by galbramc

added unit tests for GalerkinWeightedIntegral &, GalerkinWeightedIntegral_New

by allmaras

add test/unit/Field/Element/ElementIntegral_GalerkinWeighted_Axisymmetric_btest.cpp
edit src/Field/Element/GalerkinWeightedIntegral.h
edit src/Field/Element/GalerkinWeightedIntegral_New.h
add test/unit/Field/Element/ElementIntegral_GalerkinWeighted_btest.cpp

added differential multiplier to integrations for FP and LIP Kutta condition (even though these are expected to be Cartesian)

by allmaras

edit src/Discretization/Potential_Drela/IntegrandBoundaryFrame_CG_LIP_Drela.h
edit src/Discretization/Potential_Drela/IntegrandBoundaryFrame_CG_FP_Drela.h

initial creation of 2-D axisymmetric Euler/NS PDE &, BC classes, Roe upwinding

by allmaras

add test/unit/IO/pde/AxisymmetricNS/Q2DAxiPrimitiveRhoPressure_pattern.txt
add test/unit/pde/AxisymmetricNS/PDEEuler2DAxi_btest.cpp
add src/pde/AxisymmetricNS/TraitsEulerAxi.h
edit src/pde/NS/PDEEuler2D.h
edit test/unit/pde/NS/HLLC2D_btest.cpp
add src/pde/AxisymmetricNS/Q2DAxiPrimitiveRhoPressure.h
edit test/unit/pde/CMakeLists.txt
add src/pde/AxisymmetricNS/NSVariable2DAxi.h
add test/unit/pde/AxisymmetricNS/Q2DAxiPrimitiveRhoPressure_btest.cpp
edit src/pde/NS/PDEEuler1D.h
add test/unit/IO/pde/AxisymmetricNS/PDEEuler2DAxi_pattern.txt
add test/unit/pde/AxisymmetricNS/PDENavierStokes2DAxi_btest.cpp
add src/pde/AxisymmetricNS/Q2DAxiConservative.h
add src/pde/AxisymmetricNS/SolutionFunction2DAxi.cpp
add test/unit/IO/pde/AxisymmetricNS/Q2DAxiPrimitiveRhoTemperature_pattern.txt
add src/pde/AxisymmetricNS/CMakeLists.txt
add test/unit/pde/AxisymmetricNS/RoeAxi.nb
add src/pde/AxisymmetricNS/RoeAxi.h
add src/pde/AxisymmetricNS/BCNavierStokes2DAxi_mitState.h
edit src/pde/CMakeLists.txt
add src/pde/AxisymmetricNS/BCEuler2DAxi.h
add test/unit/pde/AxisymmetricNS/BCNavierStokes2DAxi_mitState_btest.cpp
add src/pde/AxisymmetricNS/BCEuler2DAxi.cpp
add src/pde/AxisymmetricNS/SolutionFunction2DAxi.h
add src/pde/AxisymmetricNS/PDEEuler2DAxi.h
edit src/pde/NS/Roe.h
add src/pde/AxisymmetricNS/TraitsNavierStokesAxi.h
edit src/pde/NS/PDEEuler3D.h
add src/pde/AxisymmetricNS/BCNavierStokes2DAxi.h
add src/pde/AxisymmetricNS/BCNavierStokes2DAxi.cpp
add src/pde/AxisymmetricNS/PDEEuler2DAxiSBR.h
add src/pde/AxisymmetricNS/Q2DAxiPrimitiveRhoTemperature.h
add test/unit/IO/pde/AxisymmetricNS/BCEuler2DAxi_mitState_pattern.txt
add src/pde/AxisymmetricNS/BCEuler2DAxi_mitState.h
add src/pde/AxisymmetricNS/PDENavierStokes2DAxi.h
add src/pde/AxisymmetricNS/NSVariable2DAxi.cpp
add test/unit/IO/pde/AxisymmetricNS/Q2DAxiConservative_pattern.txt
edit test/unit/pde/NS/Roe_btest.cpp
add test/unit/pde/AxisymmetricNS/BCEuler2DAxi_mitState_btest.cpp
add test/unit/pde/AxisymmetricNS/CMakeLists.txt
add test/unit/pde/AxisymmetricNS/Q2DAxiPrimitiveRhoTemperature_btest.cpp
add test/unit/pde/AxisymmetricNS/Q2DAxiConservative_btest.cpp
add test/unit/IO/pde/AxisymmetricNS/BCNavierStokes2DAxi_mitState_pattern.txt
add test/unit/pde/AxisymmetricNS/PDEEuler2DAxiSBR_btest.cpp
add test/unit/pde/AxisymmetricNS/SolutionFunction2DAxi_btest.cpp

bug fix in normal flux for no-slip adiabatic BC with moving wall (energy flux

by allmaras

edit test/unit/pde/AxisymmetricNS/Q2DAxiPrimitiveRhoTemperature_btest.cpp
edit test/unit/pde/AxisymmetricNS/Q2DAxiConservative_btest.cpp
edit test/unit/pde/AxisymmetricNS/Q2DAxiPrimitiveRhoPressure_btest.cpp
edit test/unit/pde/AxisymmetricNS/BCNavierStokes2DAxi_mitState_btest.cpp
edit src/pde/AxisymmetricNS/Q2DAxiConservative.h
edit src/pde/AxisymmetricNS/Q2DAxiPrimitiveRhoTemperature.h
edit src/pde/AxisymmetricNS/BCNavierStokes2DAxi_mitState.h
edit src/pde/AxisymmetricNS/PDEEuler2DAxiSBR.h
edit test/unit/pde/AxisymmetricNS/PDEEuler2DAxiSBR_btest.cpp
edit src/pde/AxisymmetricNS/Q2DAxiPrimitiveRhoPressure.h

bug fix in normal flux for 2D no-slip, adiabatic BC with moving walls (energy is

by allmaras

edit src/pde/NS/Q2DPrimitiveSurrogate.h
edit test/unit/pde/NS/Q2DPrimitiveRhoTemperature_btest.cpp
edit src/pde/NS/Q2DConservative.h
edit src/pde/NS/BCNavierStokes2D.h
edit test/unit/pde/NS/Q2DEntropy_btest.cpp
edit test/unit/pde/NS/Q2DPrimitiveRhoPressure_btest.cpp
edit test/unit/pde/NS/BCNavierStokes2D_btest.cpp
edit src/pde/NS/Q2DPrimitiveRhoPressure.h
edit src/pde/NS/Q2DEntropy.h
edit src/pde/NS/Q2DPrimitiveRhoTemperature.h
edit test/unit/pde/NS/Q2DConservative_btest.cpp
edit test/unit/pde/NS/Q2DPrimitiveSurrogate_btest.cpp

typo fix

by allmaras

edit src/Discretization/Potential_Drela/IntegrandBoundaryFrame_CG_FP_Drela.h
edit src/Discretization/Potential_Drela/IntegrandBoundaryFrame_CG_LIP_Drela.h

XField template modifications required for successful build of Axisymmetric

by allmaras

edit src/Field/Field_CG/Constructor/Field_CG_TraceConstructorVolume.cpp
edit src/Field/Field_CG/Constructor/Field_CG_CellConstructorArea_2D.cpp
edit src/Field/XField/Partition/XField_Lagrange_impl.h
edit src/Field/XField/XFieldArea_buildFrom_impl.h
edit test/unit/UnitGrids/XField2D_Box_Triangle_X1.cpp
edit src/Field/XField/XFieldArea_Instantiate_2D.cpp
edit src/Field/Field_CG/Constructor/Field_CG_CellConstructorLine_impl.h
edit src/Field/Field_CG/Field_CG_Topology.h
edit src/Field/FieldTypes.h
edit src/Field/Field_CG/Constructor/Field_CG_CellConstructorVolume.cpp
edit src/Field/XField/XFieldArea_checkGrid_impl.h
edit test/unit/UnitGrids/XField2D_Annulus_Triangle_X1.cpp
edit test/unit/UnitGrids/XField2D_Box_Triangle_X1_btest.cpp
edit test/unit/UnitGrids/XField2D_Annulus_Triangle_X1.h
edit src/Field/Field_CG/Constructor/Field_CG_TraceConstructorLine_impl.h
edit test/unit/UnitGrids/XField2D_Annulus_Triangle_X1_btest.cpp
edit src/Field/XField/XField3D_Wake.h
edit src/Field/Field_CG/Constructor/Field_CG_TraceConstructor.h
edit src/Field/Field_CG/Constructor/Field_CG_TraceConstructorArea_2D.cpp
edit test/unit/Field/XField/XField_Lagrange_Partition_btest.cpp
edit src/Field/XField/XField.h
edit test/unit/UnitGrids/XField2D_Box_Triangle_X1.h
edit src/Field/Field_CG/Constructor/Field_CG_CellConstructorArea_impl.h
edit src/Field/Field_CG/Constructor/Field_CG_TraceConstructorSpacetime.cpp
edit src/Field/Field_CG/Constructor/Field_CG_TraceConstructorArea_impl.h
edit src/Field/XField/XFieldArea.h
edit src/Field/XField/Partition/XField_Lagrange.h
edit src/Field/Field_CG/Constructor/Field_CG_CellConstructor.h
edit src/Field/XField/Partition/XField_Lagrange_Area_2D.cpp
edit src/Field/Field_CG/Constructor/Field_CG_CellConstructorSpacetime.cpp

modified calls to XField2D_Box_Triangle_X1 to reflect that it is now templated (with default Axes=Cartesian)

by allmaras

edit test/system/LocalSolve/AlgebraicEquationSet_Local_VMSD_Triangle_AD_btest.cpp
edit test/unit/Field/HField/GenHField_DG_btest.cpp
edit test/sandbox/Adapt2D_DGBR2_TwoPhase_ArtificialViscosity_ST_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_BuckleyLeverett_ArtificialViscosity_ST_Block2x2_toy.cpp
edit test/unit/Discretization/GloballyConstrained/AlgebraicEquationSet_GloballyConstrained_btest.cpp
edit test/unit/Discretization/Galerkin/JacobianFunctionalCell_Galerkin_btest.cpp
edit test/sandbox/Solve2D_DGBR2_Triangle_AD_LocalRefine_toy.cpp
edit test/unit/Discretization/HDG/SetFieldCell_HDG_AuxiliaryVariable_AD_btest.cpp
edit test/unit/Field/FieldLinesearch_btest.cpp
edit test/system/Asymptotic/ErrorOrder_2D_DGBR2_RANS_MMS_btest.cpp
edit test/unit/Discretization/HDG/AlgebraicEquationSet_EDG_Triangle_AD_btest.cpp
edit test/unit/Discretization/HDG/JacobianInteriorTrace_HDG_AD_btest.cpp
edit test/sandbox/Solve2D_HDG_Triangle_NavierStokes_OjedaMMS_toy.cpp
edit test/sandbox/Adjoint1D_DGAdvective_AD_ST_toy.cpp
edit test/sandbox/Solve2D_DGBR2_LinearRobin_mitLG_sansLG_Consistency_AD_toy.cpp
edit test/sandbox/Adapt2D_HDG_BuckleyLeverett_ST_toy.cpp
edit test/sandbox/Solve2D_VMSDBR2_Triangle_NavierStokes_DrivenCavity_MassConstraint_toy.cpp
edit test/sandbox/Solve2D_DGBR2_Eikonal_Distance_toy.cpp
edit test/unit/Discretization/VMSD/JacobianFunctionalCell_VMSD_AD_btest.cpp
edit test/unit/Discretization/HDG/AlgebraicEquationSet_HDG_Triangle_AD_btest.cpp
edit test/unit/Discretization/DG/JacobianBoundaryTrace_Dirichlet_mitState_DGBR2_TwoPhase_btest.cpp
edit test/sandbox/Solve1D_DGAdvective_AD_ST_toy.cpp
edit test/unit/Field/FieldDataMatrixD_Lift_BoundaryTrace_btest.cpp
edit test/sandbox/Solve2D_DGBR2_AD_ST_toy.cpp
edit test/system/Asymptotic/ErrorOrder_2D_DGBR2_Triangle_AD_Bernstein_btest.cpp
edit test/unit/Discretization/Galerkin/JacobianNonZeroPattern_Galerkin_Triangle_AD_btest.cpp
edit test/sandbox/Adapt2D_DGBR2_AD_Burgers_ST_toy.cpp
edit test/system/LocalSolve/LocalSolve2D_Split_DGBR2_Triangle_AD_AV_btest.cpp
edit test/unit/Discretization/HDG/AuxiliaryAdjoint_HDG_AD_btest.cpp
edit test/unit/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_Triangle_AD_btest.cpp
edit test/sandbox/Adapt2D_DGBR2_Euler_ArtNozzle_AV_ST_toy.cpp
edit test/unit/Discretization/DG/AlgebraicEquationSet_DGAdvective_Triangle_AD_btest.cpp
edit test/unit/Discretization/VMSD/JacobianCell_VMSD_AD_btest.cpp
edit test/sandbox/Solve2D_DGBR2_Triangle_NavierStokes_OjedaMMS_toy.cpp
edit test/sandbox/Adjoint1D_DGAdvective_BuckleyLeverett_ST_toy.cpp
edit test/system/Asymptotic/ErrorOrder_2D_CG_Triangle_AD_Bernstein_btest.cpp
edit test/unit/Discretization/VMSD/AlgebraicEquationSet_VMSD_Triangle_AD_btest.cpp
edit test/sandbox/Adapt2D_DGBR2_AD_ArtificialViscosity_toy.cpp
edit test/unit/Discretization/DG/JacobianInteriorTrace_DGBR2_TwoPhase_btest.cpp
edit test/system/Asymptotic/ErrorOrder_1D_DGBR2_BuckleyLeverett_ST_btest.cpp
edit test/unit/Discretization/HDG/JacobianBoundaryTrace_LinearScalar_sansLG_HDG_AD_btest.cpp
edit test/unit/Field/Local/Legacy/Field2D_ElementLocal_Dual_CG_btest.cpp
edit test/system/LocalSolve/AlgebraicEquationSet_Local_VMSDBR2_Triangle_AD_btest.cpp
edit test/unit/Discretization/Block/AlgebraicEquationSet_Block2x2_DGBR2_Triangle_BuckleyLeverett_AV_btest.cpp
edit test/unit/Discretization/HDG/JacobianFunctionalCell_HDG_btest.cpp
edit test/sandbox/Solve2D_CGStabilized_Triangle_NavierStokes_DrivenCavity_MassConstraint_toy.cpp
edit test/unit/Adaptation/MOESS/ParamFieldBuilder_btest.cpp
edit test/unit/Discretization/DG/Adjoint_LiftingOperator_DGBR2_Triangle_NS_btest.cpp
edit test/unit/Field/XField/Local/XField_LocalPatch_Simplex_forCG_btest.cpp
edit test/unit/Discretization/Block/AlgebraicEquationSet_Block2x2_DGBR2_BuckleyLeverett_ArtificialViscosity_ST_btest.cpp
edit test/sandbox/Solve2D_Galerkin_Stabilized_AD_ST_toy.cpp
edit test/sandbox/Solve2D_DGBR2_Triangle_P_Poisson_Distance_toy.cpp
edit test/unit/Discretization/CG/ResidualParamSensitivity_CG_Triangle_AD_btest.cpp
edit test/unit/Discretization/Galerkin/SolutionData_Galerkin_Stabilized_btest.cpp
edit test/system/Adaptation/SolverInterface_Galerkin_Stabilized_btest.cpp
edit test/unit/Discretization/Block/AlgebraicEquationSet_Block2x2_Triangle_AD_btest.cpp
edit test/unit/Discretization/DG/AlgebraicEquationSet_DGBR2_Triangle_AD_btest.cpp
edit test/sandbox/Adapt2D_DGBR2_L2_BoundaryLayer_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_TwoPhase_Steady_QuarterFiveSpot_toy.cpp
edit test/system/Asymptotic/Adjoint2D_DGBR2_Triangle_AD_btest.cpp
edit test/unit/Discretization/DG/JacobianCell_DGBR2_LiftedQuantity_TwoPhaseAV_btest.cpp
edit test/system/Asymptotic/Adjoint2D_CG_Triangle_AD_btest.cpp
edit test/unit/Discretization/VMSDBR2/AlgebraicEquationSet_VMSDBR2_Triangle_AD_btest.cpp
edit test/sandbox/ErrorOrder_2D_VMSDBR2_Triangle_AD_toy.cpp
edit test/sandbox/Solve2D_CG_Eikonal_Distance_toy.cpp
edit test/sandbox/Adapt2D_VMSDBR2_AD_ST_toy.cpp
edit test/system/Asymptotic/Adjoint1D_DGBR2_BuckleyLeverett_ST_btest.cpp
edit test/sandbox/Adapt2D_DGBR2_TwoPhase_ST_Symmetric_toy.cpp
edit test/sandbox/Solve1D_DGBR2_Line_Euler_ArtNozzle_AV_ST_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_TwoPhase_ST_toy.cpp
edit test/system/Asymptotic/Adjoint2D_HDG_Triangle_AD_sansLG_btest.cpp
edit test/system/LocalSolve/LocalSolve2D_HDG_Triangle_AD_btest.cpp
edit test/sandbox/Solve1D_DGBR2_BuckleyLeverett_ArtificialViscosity_ST_toy.cpp
edit test/unit/Discretization/DG/JacobianCell_DGBR2_TwoPhase_btest.cpp
edit test/unit/Discretization/DG/SolutionData_DGBR2_Block2_btest.cpp
edit test/system/Asymptotic/Adjoint2D_CG_Triangle_AD_Bernstein_btest.cpp
edit test/unit/Discretization/DG/AlgebraicEquationSet_Local_DGBR2_Triangle_AD_btest.cpp
edit test/unit/Field/XField/Local/XField2D_LocalPatch_Element_DG_btest.cpp
edit test/unit/Discretization/Galerkin/AlgebraicEquationSet_ProjectFunction_btest.cpp
edit test/unit/SolutionTrek/Continuation/PseudoTime_btest.cpp
edit test/unit/Field/Local/Legacy/XField2D_EdgeLocal_Primal_Split_btest.cpp
edit test/sandbox/Adapt2D_DGBR2_L2_CornerSingularity_toy.cpp
edit test/unit/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_Stabilized_Triangle_AD_btest.cpp
edit test/unit/Discretization/HDG/AlgebraicEquationSet_Local_HDG_Triangle_AD_btest.cpp
edit test/unit/Field/Local/Legacy/Field2D_EdgeLocal_Primal_CG_btest.cpp
edit test/sandbox/Solve1D_DGAdvective_BuckleyLeverett_ST_toy.cpp
edit test/unit/Adaptation/MOESS/ParamFieldBuilder_Block2_btest.cpp
edit test/unit/Adaptation/MOESS/MOESS_btest.cpp
edit test/sandbox/Adapt2D_DGBR2_sansBOOM_toy.cpp
edit test/unit/Discretization/DG/JacobianTranspose_DGBR2_Triangle_AD_btest.cpp
edit test/sandbox/Adapt2D_DGBR2_BuckleyLeverett_ArtificialViscosity_ST_toy.cpp
edit test/sandbox/Solve2D_DGBR2_Triangle_Poisson_toy.cpp
edit test/unit/Discretization/DG/SolutionData_DGBR2_btest.cpp
edit test/sandbox/Adapt2D_DGBR2_BuckleyLeverett_ST_toy.cpp
edit test/unit/Discretization/HDG/JacobianFunctionalBoundaryTrace_HDG_sansLG_btest.cpp
edit test/system/Adaptation/SolverInterface_DGAdvective_btest.cpp
edit test/sandbox/Adapt2D_DGBR2_AD_ST_toy.cpp
edit test/system/Asymptotic/ErrorOrder_2D_CGStabilized_RANS_MMS_btest.cpp
edit test/system/Asymptotic/Solve2D_DGAdvective_LinearRobin_mitLG_sansLG_Consistency_AD_btest.cpp
edit test/unit/Discretization/Galerkin/JacobianTranspose_Galerkin_Triangle_AD_btest.cpp
edit test/system/Asymptotic/ErrorOrder_2D_DGBR2_Triangle_AD_btest.cpp
edit test/unit/Discretization/Galerkin/AlgebraicEquationSet_Local_Galerkin_Stabilized_Triangle_AD_btest.cpp
edit test/system/Asymptotic/ErrorOrder_2D_CG_Triangle_AD_btest.cpp
edit test/system/LocalSolve/LocalSolve2D_Split_HDG_Triangle_AD_btest.cpp
edit test/unit/Field/XField/Local/XField_LocalPatch_Simplex_forDG_btest.cpp
edit test/unit/SolutionTrek/TimeMarching/RK_btest.cpp
edit test/system/Asymptotic/Adjoint2D_HDG_Triangle_AD_mitState_btest.cpp
edit test/unit/Discretization/DG/JacobianCell_DGBR2_LiftingOperator_LiftedQuantity_TwoPhaseAV_btest.cpp
edit test/sandbox/Solve2D_CG_Triangle_Poisson_toy.cpp
edit test/unit/Discretization/HDG/AuxiliaryAdjoint_HDG_NS_btest.cpp
edit test/sandbox/Adapt2D_Galerkin_Stabilized_L2_CornerSingularity_toy.cpp
edit test/unit/Field/HField/GenHField_CG_btest.cpp
edit test/system/Asymptotic/ErrorOrder_2D_DGAdvective_Annulus_Triangle_btest.cpp
edit test/sandbox/Solve2D_CG_AD_ArtificialViscosity_toy.cpp
edit test/unit/Discretization/Galerkin/ExtractCGLocalBoundaries_btest.cpp
edit test/sandbox/Adapt2D_DGBR2_Euler_ArtificialViscosity_ST_toy.cpp
edit test/sandbox/Solve2D_HDG_Triangle_AD_STtrick_toy_LGOFF.cpp
edit test/unit/Discretization/HDG/JacobianCell_HDG_AD_btest.cpp
edit test/sandbox/Solve2D_EDG_Triangle_Stokes_OjedaMMS_toy.cpp
edit test/sandbox/Adapt2D_Galerkin_Stabilized_AD_AxiSymDoubleBoundaryLayer_toy.cpp
edit test/sandbox/ErrorOrder_2D_VMSD_Triangle_AD_toy.cpp
edit test/system/Adaptation/SolverInterface_DGBR2_btest.cpp
edit test/system/Asymptotic/ErrorOrder_1D_DGBR2_TwoPhase_ST_btest.cpp
edit test/unit/Discretization/DG/JacobianFunctionalCell_DGBR2_btest.cpp
edit test/unit/Field/Local/Legacy/XField2D_EdgeLocal_Primal_btest.cpp

instantiations needed for axisymmetric globally constrained (size 5 systems)

by allmaras

edit src/LinearAlgebra/SparseLinAlg/ScalarMatrix_CRS_int.cpp
edit src/LinearAlgebra/DenseLinAlg/StaticSize/MatMul/MatrixS_MatMul_Native_Surreal_Instantiate.cpp
edit src/LinearAlgebra/DenseLinAlg/StaticSize/MatrixS_Decompose_LUP_Surreal_Instantiate.cpp
edit src/LinearAlgebra/DenseLinAlg/StaticSize/MatrixS_InverseLUP_Surreal_Instantiate.cpp
edit src/NonLinearSolver/NewtonSolver_MatrixBlock_2x2_Instantiate.cpp
edit src/LinearAlgebra/SparseLinAlg/Direct/UMFPACK/UMFPACKSolver_MatrixBlock_2x2_Instantiate.cpp
edit src/LinearAlgebra/SparseLinAlg/Krylov/FGMRES_MatrixBlock_2x2_Instantiate.cpp
edit src/NonLinearSolver/LineUpdate/HalvingSearchLineUpdate_MatrixBlock_2x2_Instantiate.cpp

member function additions/changes needed for axisymmetric ND convert

by allmaras

edit src/pde/AxisymmetricNS/PDENavierStokes2DAxi.h
edit CMakeLists.txt
edit src/pde/AxisymmetricNS/PDEEuler2DAxi.h
edit src/pde/AxisymmetricNS/PDEEuler2DAxiSBR.h
edit src/pde/AxisymmetricNS/BCEuler2DAxi_mitState.h
edit src/pde/AxisymmetricNS/BCNavierStokes2DAxi_mitState.h

adding some missed logic

by deanna.sewell

edit src/SolutionTrek/TimeMarching/BackwardsDifference/BDF.h

Add skin friction output for body forces

by galbramc

edit src/Discretization/Galerkin/IntegrandBoundaryTrace_Flux_mitState_Nitsche.h
edit src/Meshing/EGTess/EGTessModel.cpp
edit src/Adaptation/CMakeLists.txt
edit src/UserInterfaces/CMakeLists.txt
edit src/pde/NS/PDEEulermitAVDiffusion2D.h
edit src/UserInterfaces/BodyForceSolver_impl.h
edit src/Discretization/VMSDBR2/JacobianFunctionalBoundaryTrace_Dispatch_VMSD_BR2.h
edit src/Field/NormalField/NormalField_Volume.cpp
delete src/UserInterfaces/output_Tecplot_SA_CG.cpp
add src/Field/output_Tecplot/output_Tecplot_SA_CG.h

added BDF routine modifications that were staged but not included in previous commit

by deanna.sewell

edit test/sandbox/Solve1D_DGAdvective_BuckleyLeverett_BDF_toy.cpp
edit test/sandbox/Solve1D_DGAdvective_Line_Euler_Sod_toy.cpp
edit test/sandbox/Solve1D_DGAdvective_Line_Euler_Pulse_toy.cpp
edit test/system/Asymptotic/ErrorOrder_1D_CG_AD_BDF_btest.cpp
edit test/sandbox/Solve1D_CG_Line_Euler_Sod_toy.cpp
edit test/sandbox/Solve2D_DGBR2_Quad_Euler_ForwardFacingStep_AV_BDF_toy.cpp
edit test/system/Asymptotic/ErrorOrder_1D_HDG_AD_BDF_btest.cpp
edit src/SolutionTrek/TimeMarching/BackwardsDifference/BDF.h
edit test/sandbox/Solve1D_DGBR2_Line_Euler_ArtNozzle_AV_BDF_toy.cpp
edit test/system/Asymptotic/ErrorOrder_1D_DGBR2_AD_BDF_btest.cpp
edit test/unit/SolutionTrek/TimeMarching/BDF_btest.cpp

Compile fix

by galbramc

edit src/Field/output_Tecplot/output_Tecplot_SA_CG.h

Actual correct wall shear stress calculations.

by galbramc

edit src/Field/output_Tecplot/output_Tecplot_SA_DGBR2.cpp
edit src/Field/output_Tecplot/output_Tecplot_SA_CG.h

Forgot a file

by galbramc

edit src/UserInterfaces/BodyForceSolver_impl.h

fixed a compile warning

by deanna.sewell

edit src/SolutionTrek/TimeMarching/BackwardsDifference/BDF.h

vera fix

by galbramc

edit src/Field/output_Tecplot/output_Tecplot_SA_CG.h

Warning and unintialized data fixes

by galbramc

edit src/Field/output_Tecplot/output_Tecplot_SA_CG.h

Reformatted test cases, fixed hierarchical if statement

by cwomack

edit src/Discretization/Galerkin/Stabilization_Galerkin.h
edit src/Field/ProjectSoln/ProjectGlobalField/ProjectGlobalField_impl.h
edit test/sandbox/Adapt2D_Galerkin_Stabilized_AD_AxiSymDoubleBoundaryLayer_toy.cpp
edit test/sandbox/Adapt2D_Galerkin_Stabilized_AD_DoubleBoundaryLayer_toy.cpp

Initialize blockage to 1

by galbramc

edit src/Field/NormalField/NormalField_Volume.cpp

all Field classes must be templated with Axes (since they contain and/or

by allmaras

edit src/ErrorEstimate/Galerkin/ErrorEstimateInteriorTrace_SIP_Galerkin.h
edit src/Field/Field_NodalView.h
edit src/Field/Field_CG/FieldSpacetime_CG_BoundaryTrace.h
edit src/Meshing/avro/MesherInterface_avro_impl.h
edit src/Discretization/VMSDBR2/SetLiftingOperator_VMSD_BR2.h
edit src/Discretization/VMSDBR2/JacobianCell_VMSD_BR2.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Local_Galerkin_Stabilized.h
edit src/Field/Field_CG/FieldArea_CG_Cell.h
edit src/Discretization/VMSDBR2/JacobianInteriorTrace_onBoundary_VMSD_BR2.h
edit src/Field/ProjectSoln/Project_DG_to_CG.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Local_Project.h
edit src/Discretization/VMSD/JacobianFunctionalCell_VMSD.h
edit src/ErrorEstimate/VMSD/ErrorEstimate_VMSD_BR2.h
edit src/Discretization/DG/JacobianBoundaryTrace_DGBR2_Param.h
edit src/Discretization/Galerkin/FunctionalBoundaryTrace_Dispatch_Galerkin.h
edit src/Field/output_Tecplot/output_Tecplot.h
edit src/Adaptation/MeshAdapter/MeshAdapter2D.cpp
edit src/Field/output_Tecplot/output_Tecplot_LIP.cpp
edit src/Adaptation/MOESS/MOESS.h
edit src/Discretization/Galerkin/ResidualBoundaryTrace_Galerkin.h
edit src/Discretization/VMSD/ResidualCell_VMSD.h
edit src/Field/Field_NodalView_impl.h
edit src/Discretization/Potential_Drela/AlgebraicEquationSet_CG_Potential_Drela.h
edit src/Discretization/Galerkin/ResidualCell_Galerkin_CutCellTransitionIBLUniField.h
edit test/unit/Discretization/HDG/IntegrandTest_HDG.h
edit src/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_impl.h
edit src/Discretization/VMSD/Jacobian_InnerBoundaryTrace_VMSD.h
edit src/Discretization/HDG/JacobianBoundaryTrace_FieldTrace_HDG.h
edit src/Discretization/DG/SolutionData_DGBR2_Block2.h
edit src/Field/Field_EG/FieldLine_EG_Cell.h
edit src/Field/XField/XFieldNode_Traits.h
edit src/Meshing/AFLR/AFLR2.cpp
edit src/Field/Field_EG/FieldSpacetime_EG_Cell_impl.h
edit src/Discretization/HDG/JacobianFunctionalBoundaryTrace_Dispatch_HDG.h
edit src/Discretization/HDG/JacobianCell_HDG_PTC.h
edit src/Meshing/EPIC/MesherInterface_Epic.cpp
edit test/unit/Discretization/Galerkin/ResidualCell_Galerkin_BDF_AD_btest.cpp
edit src/Discretization/HDG/ResidualBoundaryTrace_Dispatch_HDGAdvective.h
edit src/Field/output_Tecplot/output_Tecplot_FieldVolume.cpp
edit src/ErrorEstimate/Galerkin/ErrorEstimate_Galerkin_Stabilized.h
edit src/Field/Field_EG/FieldVolume_EG_Cell.h
edit src/Field/output_Tecplot/output_Tecplot_SA_DGBR2.cpp
edit src/Discretization/Galerkin/JacobianFunctionalInteriorTrace_Galerkin.h
edit src/Field/Field_DG/Field_DG_CellBase_impl.h
edit src/Discretization/Galerkin/JacobianBoundaryTrace_FieldTrace_Galerkin_Param.h
edit src/Discretization/VMSDBR2/SetFieldBoundaryTrace_VMSD_LiftingOperator.h
edit src/Discretization/Galerkin/JacobianCell_Galerkin_CutCellTransitionIBLUniField.h
edit src/ErrorEstimate/ErrorEstimate_Common.h
edit src/Discretization/VMSD/ResidualInteriorTrace_VMSD.h
edit src/Discretization/DG/AlgebraicEquationSet_DGBR2.h
edit src/Field/HField/HField_DG/HField_DG_impl.h
edit src/Field/Field_CG/FieldLine_CG_Cell_impl.h
edit src/Meshing/refine/refine_grid.cpp
edit src/Discretization/DG/FunctionalCellwise_DGBR2.h
edit src/Meshing/refine/MesherInterface_refine.cpp
edit src/Discretization/HDG/ResidualBoundaryTrace_Dispatch_HDG.h
edit src/Discretization/HDG/ResidualCell_HDG_HB.h
edit src/ErrorEstimate/HDG/ErrorEstimateInteriorTrace_HDG.h
edit src/Discretization/DG/JacobianFunctionalCell_DGBR2.h
edit src/Discretization/HDG/AWResidualBoundaryTrace_HDG.h
edit src/Field/Field_DG/FieldLiftLine_DG_BoundaryTrace.h
edit src/Discretization/VMSDBR2/ResidualInteriorTrace_onBoundary_VMSD_BR2.h
edit src/SolutionTrek/Continuation/ImplicitResidualSmoothing/AlgebraicEquationSet_IRS.h
edit src/Field/Field_CG/FieldVolume_CG_Trace.h
edit src/Discretization/VMSDBR2/JacobianCell_VMSD_BR2_withPTC.h
edit src/Field/Field_CG/FieldSpacetime_CG_Trace_impl.h
edit src/Field/Field_CG/FieldVolume_CG_Cell_impl.h
edit src/Meshing/avro/MesherInterface_Wake_avro.cpp
edit src/ErrorEstimate/Galerkin/ErrorEstimateBoundaryTrace_Dispatch_Galerkin.h
edit src/ErrorEstimate/Galerkin/ErrorEstimateBase_Galerkin.h
edit src/Field/Field_CG/FieldSpacetime_CG_Cell_impl.h
edit src/Discretization/Galerkin/JacobianInteriorTrace_Galerkin.h
edit src/Meshing/EPIC/WriteMeshMetric_Epic.h
edit src/Adaptation/MetricConformity.h
edit src/Discretization/Galerkin/ResidualBoundaryTrace_Dirichlet_mitLG_Galerkin.h
edit src/Discretization/HDG/ResidualCell_HDG.h
edit src/Field/output_Tecplot/output_Tecplot_MetricVolume4.cpp
edit src/Field/ElementCounter.h
edit src/Discretization/DG/AlgebraicEquationSet_DGAdvective.h
edit src/Field/Field_DG/FieldVolume_DG_Cell.h
edit src/Meshing/Pointwise/MesherInterface_Pointwise.cpp
edit src/Discretization/DG/SetFieldBoundaryTrace_Dispatch_LiftingOperator.h
edit src/SolutionTrek/Continuation/PseudoTime/AlgebraicEquationSet_PTC_VMSD.h
edit src/ErrorEstimate/Galerkin/ErrorEstimateInteriorTrace_PrimalStrongForm_Galerkin.h
edit src/Adaptation/MOESS/NodalMetrics/NodalMetrics_impl.h
edit src/Field/NormalField/NormalField_Volume.cpp
edit src/Discretization/Galerkin/JacobianCell_Galerkin_Param_CutCellTransitionIBLUniField.h
edit src/Discretization/HDG/SetFieldBoundaryTrace_Dispatch_AuxiliaryVariable.h
edit src/Discretization/HDG/ResidualInteriorTrace_HDG.h
edit src/ErrorEstimate/Galerkin/ErrorEstimateNodal_Galerkin_Stabilized.h
edit src/Discretization/DG/FunctionalBoundaryTrace_Dispatch_DGBR2.h
edit src/Discretization/Galerkin/SolutionData_Galerkin.h
edit src/ErrorEstimate/Galerkin/ErrorEstimate_StrongForm_Galerkin_Stabilized.h
edit src/Adaptation/MeshAdapter/MeshAdapter_impl.h
edit src/Field/Field_EG/FieldArea_EG_Cell.h
edit src/Meshing/Embedding/MesherInterface_Embedding.cpp
edit src/Discretization/HDG/JacobianBoundaryTrace_HDGAdvective_Param.h
edit src/ErrorEstimate/HDG/ErrorEstimate_HDG.h
edit src/ErrorEstimate/DG/ErrorEstimate_DGBR2_impl.h
edit src/Meshing/Pointwise/WriteMetric_PointwisePCD.cpp
edit src/Adaptation/MOESS/ErrorModel/ErrorModel_impl.h
edit src/Field/XField/XFieldLine.h
edit src/Discretization/HDG/ResidualInteriorTrace_HDGAdvective.h
edit src/Discretization/HDG/ResidualBoundaryTrace_FieldTrace_GalerkinEDG.h
edit src/Field/Field_EG/FieldVolume_EG_Cell_impl.h
edit src/Discretization/DG/FieldBundle_DGBR2.h
edit src/ErrorEstimate/Galerkin/ErrorEstimateInteriorTrace_Galerkin.h
edit src/ErrorEstimate/Galerkin/ErrorEstimateBoundaryTrace_FieldTrace_Galerkin.h
edit src/Discretization/HDG/AlgebraicEquationSet_HDGAdvective_CutcellTransitionIBL.h
edit src/Field/Field_CG/FieldVolume_CG_InteriorTrace.h
edit src/Discretization/VMSD/JacobianCell_VMSD_SC.h
edit src/Field/Field_DG/FieldArea_DG_Trace_impl.h
edit src/Field/output_Tecplot/output_Tecplot_LiftVolume.cpp
edit src/Discretization/Galerkin/ResidualBoundaryTrace_Dispatch_Galerkin.h
edit src/Meshing/FeFloa/MesherInterface_FeFloa.h
edit src/Discretization/Galerkin/SolutionData_Galerkin_Stabilized_LiftedBoundary.h
edit src/Discretization/Galerkin/JacobianInteriorTrace_Galerkin_Param.h
edit src/Discretization/VMSD/FieldBundle_VMSD.h
edit src/ErrorEstimate/HDG/ErrorEstimateCell_HDG.h
edit src/Field/Field_CG/FieldLine_CG_BoundaryTrace.h
edit src/Discretization/VMSDBR2/FieldBundle_VMSD_BR2.h
edit src/Discretization/Galerkin/JacobianBoundaryTrace_Galerkin_BCDataField.h
edit src/Field/Field_DG/FieldSpacetime_DG_Trace.h
edit src/Discretization/DG/AlgebraicEquationSet_DGBR2_impl.h
edit src/Field/Field_CG/FieldArea_CG_BoundaryTrace_impl.h
edit src/pde/FullPotential/BCLinearizedIncompressiblePotential3D.h
edit src/Field/Field_CG/FieldVolume_CG_Cell.h
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edit src/Field/Field_impl.h
edit src/Discretization/DG/JacobianBoundaryTrace_Dispatch_DGBR2_Param.h
edit src/Field/output_Tecplot/output_Tecplot_MetricVolume.cpp
edit src/Discretization/VMSD/JacobianBoundaryTrace_Dispatch_VMSD.h
edit src/Discretization/VMSDBR2/JacobianFunctionalBoundaryTrace_VMSD_BR2.h
edit src/Field/HField/GenHField_CG/GenHField_CG_impl.h
edit src/Discretization/HDG/JacobianInteriorTrace_HDGAdvective.h
edit src/Field/output_Tecplot/output_Tecplot_Field_impl.h
edit src/Discretization/HDG/FunctionalCell_HDG.h
edit src/ErrorEstimate/Galerkin/ErrorEstimateCell_Galerkin.h
edit src/Discretization/VMSDBR2/SetAdjointLO_VMSD_BR2.h
edit src/Field/Field_CG/FieldSpacetime_CG_InteriorTrace.h
edit src/Field/output_Tecplot/output_Tecplot_Metric_impl.h
edit src/Adaptation/MOESS/CostModel_LogEuclidean/CostModel_LogEuclidean_impl.h
edit src/Discretization/HDG/SetFieldBoundaryTrace_Dispatch_AuxiliaryAdjoint.h
edit src/Discretization/DG/AlgebraicEquationSet_DGAdvective_impl.h
edit src/Field/output_Tecplot/output_Tecplot_MetricLine.cpp
edit src/Discretization/VMSDBR2/AlgebraicEquationSet_VMSD_BR2.h
edit src/Discretization/DG/SolutionData_DGAdvective.h
edit src/Field/output_Tecplot/output_Tecplot_Metric.cpp
edit src/Discretization/HDG/SetFieldCell_HDG_AuxiliaryVariable.h
edit src/Discretization/HDG/JacobianBoundaryTrace_HDG_AuxiliaryVariable.h
edit src/Field/Field_DG/Field_DG_TraceBase_impl.h
edit src/ErrorEstimate/VMSD/ErrorEstimateBoundaryTrace_Dispatch_VMSD.h
edit src/Discretization/VMSD/JacobianBoundaryTrace_VMSD_SC.h
edit src/Discretization/HDG/ResidualBoundaryTrace_FieldTrace_HDG.h
edit src/Discretization/DG/SetFieldInteriorTrace_DGBR2_LiftedQuantity.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Galerkin.h
edit src/Discretization/HDG/JacobianBoundaryTrace_HDGAdvective.h

Fix shear stress calculation

by galbramc

edit src/Field/output_Tecplot/output_Tecplot_SA_CG.h

more XField* and Field* templating with Axes, trying to compile, link and

by allmaras

edit src/Meshing/libMeshb/WriteMesh_libMeshb.h
edit src/Field/XField/Local/XField_LocalPatchBase.h
edit src/Discretization/HDG/ResidualBoundaryTrace_HDGAdvective.h
edit test/system/Asymptotic/ErrorOrder_1D_DGBR2_AD_HB_btest.cpp
edit src/Discretization/HDG/JacobianBoundaryTrace_HDGAdvective.h
edit src/Field/HField/GenHField_CG/GenHField_CG_impl.h
edit src/Adaptation/MOESS/ProblemStatement_HDG_ErrorEstimate.h
edit src/Meshing/libMeshb/WriteSolution_libMeshb.cpp
edit src/Discretization/HDG/SetFieldInteriorTrace_HDG_AuxiliaryAdjoint.h
edit src/Discretization/VMSDBR2/JacobianInteriorTrace_VMSD_BR2.h
edit src/Meshing/EPIC/MesherInterface_Epic.cpp
edit src/Discretization/HDG/ResidualInteriorTrace_HDG_AuxiliaryVariable.h
edit src/Field/XField/XField.h
edit src/Field/XField/Local/XField_LocalPatchConstructor.h
edit src/Adaptation/MOESS/SolverInterface_DGBR2.h
edit src/Meshing/EPIC/SolutionField_PX.cpp
edit src/Discretization/VMSDBR2/ResidualInteriorTrace_VMSD_BR2.h
edit src/Discretization/HDG/JacobianBoundaryTrace_GalerkinEDG.h
edit src/Field/XField/Local/XField_LocalPatchBase/XField_LocalPatchBase_impl.h
edit src/ErrorEstimate/ErrorEstimate_L2.h
edit src/Field/XField/Local/XField_LocalPatch/XField_LocalPatch_impl.h
edit src/Meshing/Pointwise/MesherInterface_Pointwise.cpp
edit src/Discretization/Galerkin/ExtractCGLocalBoundaries.h
edit src/Discretization/Galerkin/JacobianFunctionalInteriorTrace_Galerkin.h
edit test/unit/Discretization/DG/IntegrandBoundaryTrace_Flux_mitState_DGBR2_NS_btest.cpp
edit src/Discretization/DG/FieldBundle_DGAdvective.h
edit src/Field/XField/Local/XField_Local_Base.h
edit src/Discretization/Galerkin/ExtractCGLocalBoundaries/ExtractCGLocalBoundaries_impl.h
edit src/Discretization/Galerkin/FieldBundle_Galerkin.h
edit src/Field/Local/FieldLift_Local.h
edit src/Discretization/HDG/JacobianCell_HDG_PTC.h
edit test/unit/SolutionTrek/HarmonicBalance/HarmonicBalance_btest.cpp
edit src/Discretization/DG/SetFieldInteriorTrace_DGBR2_LiftingOperator.h
edit src/Discretization/HDG/ResidualInteriorTrace_HDG.h
edit src/Discretization/HDG/SetFieldBoundaryTrace_HDG_AuxiliaryVariable.h
edit test/system/Asymptotic/ErrorOrder_2D_L2Project_Bernstein_btest.cpp
edit src/Adaptation/MOESS/SolverInterface_VMSD.h
edit src/Discretization/Galerkin/ResidualInteriorTrace_Galerkin.h
edit src/Discretization/HDG/JacobianBoundaryTrace_HDG_AuxiliaryVariable.h
edit src/Discretization/VMSDBR2/SetAdjointLO_InteriorTrace_onBoundary_VMSD_BR2.h
edit src/Discretization/HDG/JacobianBoundaryTrace_FieldTrace_HDG.h
edit src/Adaptation/MOESS/ParamFieldBuilder.h
edit src/Adaptation/MOESS/SolverInterface.h
edit src/Discretization/VMSD/ComputePerimeter.h
edit src/Discretization/HDG/ResidualInteriorTrace_HDGAdvective.h
edit src/Discretization/VMSD/JacobianInteriorTrace_VMSD.h
edit src/Meshing/refine/MesherInterface_refine.cpp
edit src/Discretization/HDG/ResidualBoundaryTrace_GalerkinEDG.h
edit src/ErrorEstimate/HDG/ErrorEstimate_HDG.h
edit src/Discretization/DG/SetFieldInteriorTrace_DGBR2_LiftedQuantity.h
edit src/Field/XField/Local/XField_LocalPatchConstructor/XField_LocalPatchConstructor_impl.h
edit src/Discretization/VMSDBR2/SetAdjointLO_InteriorTrace_VMSD_BR2.h
edit src/ErrorEstimate/VMSD/ErrorEstimateInteriorTrace_VMSD_BR2.h
edit src/Field/XField/XFieldArea.h
edit src/Meshing/EPIC/XField_PX.cpp
edit src/Discretization/VMSDBR2/SetLO_InteriorTrace_VMSD_BR2.h
edit src/Discretization/HDG/JacobianBoundaryTrace_HDG.h
edit src/Discretization/HDG/SetFieldBoundaryTrace_HDG_AuxiliaryAdjoint.h
edit src/Discretization/VMSDBR2/JacobianCell_VMSD_BR2_withPTC.h
edit src/Discretization/VMSD/FieldBundle_VMSD.h
edit src/ErrorEstimate/DG/ErrorEstimateInteriorTrace_DGBR2.h
edit src/ErrorEstimate/Galerkin/ErrorEstimate_Galerkin.h
edit src/Discretization/VMSD/Jacobian_InnerBoundaryTrace_VMSD.h
edit src/Discretization/DG/ResidualInteriorTrace_DGBR2.h
edit src/Discretization/HDG/JacobianCell_HDG_HB.h
edit src/Discretization/HDG/JacobianBoundaryTrace_GlobalMap.h
edit test/unit/Discretization/HDG/IntegrandTest_HDG.h
edit src/ErrorEstimate/VMSD/ErrorEstimateBase_VMSD.cpp
edit src/Discretization/Galerkin/FunctionalInteriorTrace_Galerkin.h
edit src/Discretization/VMSDBR2/JacobianInteriorTrace_onBoundary_VMSD_BR2.h
edit src/Adaptation/TargetMetric.h
edit src/Field/XField/Local/XField_LocalPatch.h
edit src/Discretization/HDG/ResidualCell_HDG_HB.h
edit src/Field/XField/XField_impl.h
edit src/Discretization/VMSDBR2/FieldBundle_VMSD_BR2.h
edit src/Field/Local/Field_Local.h
edit src/Meshing/EPIC/SolutionField_PX.h
edit src/Adaptation/MOESS/SolverInterfaceBase.h
edit src/Meshing/Embedding/MesherInterface_Embedding.cpp
edit src/Adaptation/MOESS/SolverInterface_Galerkin.h
edit src/pde/FullPotential/BCFullPotential3D.h
edit test/unit/Discretization/GloballyConstrained/Ping_Euler_RotorSource_btest.cpp
edit src/Field/Field_CG/Constructor/Field_CG_TraceConstructorArea_2D.cpp
edit src/Field/Field_CG/FieldLine_CG_Cell.h
edit src/Adaptation/MOESS/SolverInterface_VMSD_BR2.h
edit src/Discretization/HDG/AWResidualInteriorTrace_HDG.h
edit src/ErrorEstimate/Galerkin/ErrorEstimate_Galerkin_Stabilized.h
edit src/ErrorEstimate/HDG/ErrorEstimateInteriorTrace_HDG.h
edit src/Field/Field_CG/FieldLine_CG_Cell_Instantiate_2D.cpp
edit src/Field/HField/GenHField_DG.h
edit src/Discretization/Galerkin/FieldBundle_Galerkin_LiftedBoundary.h
edit src/Discretization/HDG/JacobianBoundaryTrace_FieldTrace_HDGAdvective.h
edit src/Field/HField/GenHField_CG.h
edit src/Adaptation/MOESS/SolverInterface_L2Project.h
edit src/ErrorEstimate/Galerkin/ErrorEstimateBase_Galerkin.h
edit src/Meshing/FeFloa/MesherInterface_FeFloa.cpp
edit src/Adaptation/MOESS/SolverInterface_DGAdvective.h
edit src/ErrorEstimate/VMSD/ErrorEstimateInteriorTrace_VMSD.h
edit src/Discretization/Galerkin/ResidualInteriorTrace_SIP_Galerkin.h
edit src/Field/Local/FieldLiftBoundary_Local.h
edit src/Adaptation/MOESS/CostModel_LogEuclidean.h
edit src/Discretization/VMSD/ResidualInteriorTrace_VMSD.h
edit src/Adaptation/MOESS/ErrorModel/ErrorModel_impl.h
edit src/Discretization/DG/FieldBundle_DGBR2.h
edit src/Discretization/HDG/ResidualBoundaryTrace_HDG.h
edit src/Discretization/HDG/JacobianInteriorTrace_HDG_AuxiliaryVariable.h
edit src/ErrorEstimate/VMSD/ErrorEstimateBase_VMSD.h
edit src/Field/HField/GenHField_DG/GenHField_DG_impl.h
edit src/Adaptation/MOESS/SolverInterface_Galerkin_Stabilized.h
edit src/Discretization/HDG/JacobianInteriorTrace_HDG.h
edit src/SolutionTrek/HarmonicBalance/AlgebraicEquationSet_HarmonicBalance.h
edit src/Discretization/Galerkin/JacobianInteriorTrace_SIP_Galerkin.h
edit src/Discretization/HDG/JacobianInteriorTrace_HDGAdvective.h
edit src/Meshing/EPIC/XField_PX.h

Fix blockage initialization

by galbramc

edit src/Field/NormalField/NormalField_Volume.cpp

more XField* and Field* templating with Axes, trying to compile, link and

by allmaras

edit src/Field/output_Tecplot/output_Tecplot_MetricVolume4.cpp
edit src/Field/output_Tecplot/output_Tecplot_FieldVolume.cpp
edit src/Field/output_Tecplot/output_Tecplot_MetricVolume.cpp
edit src/Discretization/Galerkin/IntegrandCell_ProjectDistance.h
edit src/Field/Local/Field_Local.h
edit src/Field/output_Tecplot/output_Tecplot_Metric.cpp
edit src/Field/output_Tecplot/output_Tecplot_MetricArea.cpp
edit test/sandbox/Solve2D_L2Project_MOESS_toy.cpp
edit src/Field/output_Tecplot/output_Tecplot_MetricLine.cpp
edit src/Field/output_Tecplot/output_Tecplot_FieldArea.cpp
edit src/Field/output_Tecplot/output_Tecplot.h
edit src/Meshing/Pointwise/MesherInterface_Pointwise.cpp
edit test/sandbox/Adapt2D_L2Project_MOESS_toy.cpp
edit test/sandbox/Adapt3D_L2Project_MOESS_toy.cpp

vera squawks

by allmaras

edit src/pde/FullPotential/BCLinearizedIncompressiblePotential3D.h
edit test/unit/Field/Element/ElementIntegral_GalerkinWeighted_Axisymmetric_btest.cpp
edit src/ErrorEstimate/DG/ErrorEstimateBoundaryTrace_Dispatch_DGBR2.h
edit src/Field/XField/Local/XField_LocalPatch/XField_LocalPatch_impl.h
edit src/Field/Field_CG/FieldLine_CG_BoundaryTrace_impl.h
edit src/Discretization/VMSDBR2/AlgebraicEquationSet_VMSD_BR2.h
edit src/ErrorEstimate/Galerkin/ErrorEstimateNodal_Galerkin_Stabilized.h
edit src/Field/Field_DG/FieldSpacetime_DG_Cell.h
edit src/pde/AxisymmetricNS/RoeAxi.h
edit src/Field/Field_DG/FieldLine_DG_Cell.h
edit src/Field/output_Tecplot/output_Tecplot_FieldVolume.cpp
edit test/unit/Field/Element/ElementIntegral_GalerkinWeighted_btest.cpp
edit src/Field/Field_DG/FieldSpacetime_DG_Trace_impl.h

Axes templating for AFLR2

by allmaras

edit src/Meshing/AFLR/AFLR2.cpp

more Axes related bugs and squawks

by allmaras

edit src/Field/XField/XFieldArea_Instantiate_2D.cpp
edit src/Meshing/avro/XField_avro_impl.h
edit src/Meshing/refine/refine_grid.cpp
edit src/Meshing/refine/MesherInterface_refine.cpp
edit src/LinearAlgebra/SparseLinAlg/PETSc/PETScSolver_MatrixBlock_2x2_Instantiate.cpp
edit src/Meshing/refine/refine_ptr.h
edit src/Adaptation/MOESS/ProblemStatement_HDG_ErrorEstimate.h
edit src/Adaptation/MOESS/ErrorModel.h
edit src/Meshing/avro/XField_avro.h

more Axes fixes

by allmaras

edit src/Meshing/avro/XField_avro_impl.h
edit src/Meshing/avro/XField_avro.h
edit src/Meshing/avro/MesherInterface_avro.h
edit test/unit/Field/ElementCounter_btest.cpp

eliminated unused variables

by allmaras

edit test/unit/pde/AxisymmetricNS/PDENavierStokes2DAxi_btest.cpp
edit src/pde/AxisymmetricNS/PDENavierStokes2DAxi.h
edit test/unit/pde/AxisymmetricNS/PDEEuler2DAxi_btest.cpp
edit src/pde/AxisymmetricNS/Q2DAxiConservative.h

Axes templates for avro

by allmaras

edit src/Meshing/avro/XField_avro_3D.cpp
edit src/Meshing/avro/MesherInterface_avro_impl.h
edit src/Meshing/avro/XField_avro_impl.h
edit src/Meshing/avro/XField_avro_2D.cpp
edit src/Meshing/avro/XField_avro_4D.cpp

more Axes in avro fixes

by allmaras

edit src/Meshing/avro/XField_avro_impl.h
edit src/Meshing/avro/XField_avro.h

avro instantiations require Cartesian parameter

by allmaras

edit src/Meshing/avro/XField_avro_3D.cpp
edit test/unit/Meshing/AFLR/AFLR2_btest.cpp
edit src/Meshing/avro/XField_avro_2D.cpp
edit src/Meshing/avro/XField_avro_4D.cpp

more avro Axes fixes

by allmaras

edit test/unit/Meshing/avro/XField_avro_btest.cpp
edit src/Meshing/avro/MesherInterface_Wake_avro.h
edit src/Meshing/avro/MesherInterface_avro_2D.cpp

avro Axes fixes

by allmaras

edit src/Meshing/avro/MesherInterface_avro_2D.cpp

more fixes

by allmaras

edit src/LinearAlgebra/SparseLinAlg/Direct/MKL_PARDISO/MKL_PARDISOSolver_MatrixBlock_2x2_Instantiate.cpp
edit test/unit/pde/AxisymmetricNS/PDEEuler2DAxi_btest.cpp
edit src/Meshing/avro/MesherInterface_avro_3D.cpp

4D avro instantiation

by allmaras

edit src/Meshing/avro/MesherInterface_avro_4D.cpp

removed some redundant unit test code (was producing a compiler warning)

by allmaras

edit test/unit/pde/AxisymmetricNS/PDEEuler2DAxi_btest.cpp

Fix redundant pi/180 multiplication for asymmetric rotor source

by galbramc

edit src/pde/NS/PDEEuler3D_RotorSource.h
edit test/unit/pde/NS/PDEEuler3D_RotorSource_btest.cpp
edit src/Meshing/EGADS/RotorSource/Rotor.cpp
edit test/unit/pde/NS/PDEEulermitAVDiffusion3D_RotorSource_btest.cpp

Add missing pi/180 for asymmertic Rotor Source parameter bounds

by galbramc

edit src/UserInterfaces/BodyForceSolver_impl.h

Try moving the pi/180 scaling again

by galbramc

edit test/unit/pde/NS/PDEEuler3D_RotorSource_btest.cpp
edit src/UserInterfaces/BodyForceSolver_impl.h
edit src/Meshing/EGADS/RotorSource/Rotor.cpp
edit test/unit/pde/NS/PDEEulermitAVDiffusion3D_RotorSource_btest.cpp

Forgot a file

by galbramc

edit src/pde/NS/PDEEuler3D_RotorSource.h

Fixed DOF calculation

by cwomack

edit test/sandbox/Adapt2D_Galerkin_Stabilized_AD_AxiSymDoubleBoundaryLayer_toy.cpp
edit test/sandbox/Adapt2D_VMSDBR2_AD_DoubleBoundaryLayer_toy.cpp
edit test/sandbox/Adapt2D_DGBR2_AD_DoubleBoundaryLayer_toy.cpp
edit test/sandbox/Adapt2D_Galerkin_Stabilized_AD_DoubleBoundaryLayer_toy.cpp

Fixed XField error, changed Axisym DBL to run automatically

by cwomack

edit src/Meshing/avro/XField_avro.h
edit test/sandbox/Adapt2D_Galerkin_Stabilized_AD_AxiSymDoubleBoundaryLayer_toy.cpp

Fix halving linesearch dumpField

by galbramc

edit src/NonLinearSolver/LineUpdate/HalvingSearchLineUpdate_impl.h

Update unit test

by galbramc

edit test/unit/IO/Discretization/AlgebraicEquationSet_HDG_BL_fullstep_iPDE_iter0.plt
edit test/unit/Discretization/HDG/AlgebraicEquationSet_HDG_BuckleyLeverett_ST_btest.cpp
edit test/unit/IO/Discretization/AlgebraicEquationSet_HDG_BL_delta_iPDE_iter0.plt

More unit test updates

by galbramc

edit test/unit/IO/Discretization/AlgebraicEquationSet_DGBR2_BL_fullstep_iPDE_iter0.plt
edit test/unit/Discretization/DG/AlgebraicEquationSet_DGBR2_BuckleyLeverett_ST_btest.cpp
edit test/unit/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_BuckleyLeverett_ST_btest.cpp
edit test/unit/IO/Discretization/AlgebraicEquationSet_DGAdvective_BL_delta_iPDE_iter0.plt
edit test/unit/IO/Discretization/AlgebraicEquationSet_DGAdvective_BL_fullstep_iPDE_iter0.plt
edit src/Discretization/DG/AlgebraicEquationSet_DGAdvective.h
edit src/NonLinearSolver/LineUpdate/HalvingSearchLineUpdate_impl.h
edit src/Discretization/DG/AlgebraicEquationSet_DGBR2.h
edit test/unit/IO/Discretization/AlgebraicEquationSet_DGBR2_BL_delta_iPDE_iter0.plt
edit src/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_Stabilized_LiftedBoundary.h
edit test/unit/Discretization/DG/AlgebraicEquationSet_DGAdvective_BuckleyLeverett_ST_btest.cpp
edit test/unit/IO/Discretization/AlgebraicEquationSet_Galerkin_BL_fullstep_iPDE_iter0.plt
edit src/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_Stabilized.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Galerkin.h
edit src/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_BCDataField.h
edit test/unit/IO/Discretization/AlgebraicEquationSet_Galerkin_BL_delta_iPDE_iter0.plt

Don',t try to compare tecplot files.

by galbramc

edit test/unit/Discretization/HDG/AlgebraicEquationSet_HDG_BuckleyLeverett_ST_btest.cpp
delete test/unit/IO/Discretization/AlgebraicEquationSet_DGAdvective_BL_delta_iPDE_iter0.plt
delete test/unit/IO/Discretization/AlgebraicEquationSet_DGAdvective_BL_fullstep_iPDE_iter0.plt
delete test/unit/IO/Discretization/AlgebraicEquationSet_DGBR2_BL_delta_iPDE_iter0.plt
delete test/unit/IO/Discretization/AlgebraicEquationSet_Galerkin_BL_delta_iPDE_iter0.plt
delete test/unit/IO/Discretization/AlgebraicEquationSet_Galerkin_BL_fullstep_iPDE_iter0.plt
edit test/unit/Discretization/DG/AlgebraicEquationSet_DGBR2_BuckleyLeverett_ST_btest.cpp
edit test/unit/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_BuckleyLeverett_ST_btest.cpp
delete test/unit/IO/Discretization/AlgebraicEquationSet_DGBR2_BL_fullstep_iPDE_iter0.plt
delete test/unit/IO/Discretization/AlgebraicEquationSet_HDG_BL_delta_iPDE_iter0.plt
edit test/unit/Discretization/DG/AlgebraicEquationSet_DGAdvective_BuckleyLeverett_ST_btest.cpp
delete test/unit/IO/Discretization/AlgebraicEquationSet_HDG_BL_fullstep_iPDE_iter0.plt

Suppress cmake dev warning

by galbramc

edit CMakeLists.txt

Still need to remove the files

by galbramc

edit test/unit/Discretization/HDG/AlgebraicEquationSet_HDG_BuckleyLeverett_ST_btest.cpp
edit test/unit/Discretization/DG/AlgebraicEquationSet_DGAdvective_BuckleyLeverett_ST_btest.cpp
edit test/unit/Discretization/DG/AlgebraicEquationSet_DGBR2_BuckleyLeverett_ST_btest.cpp
edit test/unit/Discretization/Galerkin/AlgebraicEquationSet_Galerkin_BuckleyLeverett_ST_btest.cpp

Try and try again

by galbramc

edit CMakeLists.txt
edit test/unit/Discretization/HDG/AlgebraicEquationSet_HDG_BuckleyLeverett_ST_btest.cpp

Relax timing

by galbramc

edit test/unit/Discretization/GloballyConstrained/CMakeLists.txt

Use min for SA-R for now.

by galbramc

edit src/pde/NS/PDERANSSA3D.h

Minor PTC update

by galbramc

edit src/SolutionTrek/Continuation/PseudoTime/PseudoTime.h

Updates to SA-R

by galbramc

edit src/pde/NS/PDERANSSA3D.h

Use smooth math for SA-R

by galbramc

edit src/pde/NS/PDERANSSA3D.h

Added p adjoint to DGBR2 interface

by cwomack

edit test/sandbox/Adapt2D_Galerkin_Stabilized_AD_AxiSymDoubleBoundaryLayer_toy.cpp
edit test/sandbox/Adapt2D_VMSDBR2_AD_DoubleBoundaryLayer_toy.cpp
edit src/Adaptation/MOESS/SolverInterface_DGBR2.h
edit test/sandbox/Adapt2D_DGBR2_AD_DoubleBoundaryLayer_toy.cpp
edit test/unit/pde/AxisymmetricNS/PDEEuler2DAxiSBR_btest.cpp
edit test/sandbox/Adapt2D_Galerkin_Stabilized_AD_DoubleBoundaryLayer_toy.cpp

Fixed vera error and FINALLY tracked down meshing issue

by cwomack

edit src/Meshing/avro/XField_avro.h
edit test/sandbox/Adapt2D_DGBR2_AD_DoubleBoundaryLayer_toy.cpp

Fixed vera errors

by cwomack

edit test/sandbox/Adapt2D_Galerkin_Stabilized_AD_AxiSymDoubleBoundaryLayer_toy.cpp
edit test/sandbox/Adapt2D_VMSDBR2_AD_DoubleBoundaryLayer_toy.cpp

Fix bounding box check for body force camber surfaces

by galbramc

edit src/Field/NormalField/NormalField_Volume.cpp

Even more robust body force camber surface bounding box calculation

by galbramc

edit src/Field/NormalField/NormalField_Volume.cpp

More SA-R updates

by galbramc

edit src/pde/NS/PDERANSSA3D.h

SANS_refine/builddir=release_clang,buildnode=reynolds #120

Duration: 22 min

Compiler Errors

/jenkins/workspace/SANS_refine/builddir/release_clang/buildnode/reynolds/src/Meshing/refine/XField_refine.cpp:109:19: error: no matching function for call to 'ref_dist_collisions'
/jenkins/workspace/SANS_refine/builddir/release_clang/buildnode/reynolds/src/Meshing/refine/XField_refine.cpp:126:19: error: no matching function for call to 'ref_dist_collisions'

SANS_refine/builddir=release_gnu10,buildnode=reynolds #120

Duration: 28 min

Compiler Errors

/jenkins/workspace/SANS_refine/builddir/release_gnu10/buildnode/reynolds/src/Meshing/refine/XField_refine.cpp:109:59: error: cannot convert &lsquo,REF_INT*&rsquo, {aka &lsquo,int*&rsquo,} to &lsquo,const char*&rsquo,
/jenkins/workspace/SANS_refine/builddir/release_gnu10/buildnode/reynolds/src/Meshing/refine/XField_refine.cpp:126:59: error: cannot convert &lsquo,REF_INT*&rsquo, {aka &lsquo,int*&rsquo,} to &lsquo,const char*&rsquo,

SANS_refine/builddir=release_gnu11,buildnode=reynolds #120

Duration: 29 min

Compiler Errors

/jenkins/workspace/SANS_refine/builddir/release_gnu11/buildnode/reynolds/src/Meshing/refine/XField_refine.cpp:109:59: error: cannot convert &lsquo,REF_INT*&rsquo, {aka &lsquo,int*&rsquo,} to &lsquo,const char*&rsquo,
/jenkins/workspace/SANS_refine/builddir/release_gnu11/buildnode/reynolds/src/Meshing/refine/XField_refine.cpp:126:59: error: cannot convert &lsquo,REF_INT*&rsquo, {aka &lsquo,int*&rsquo,} to &lsquo,const char*&rsquo,

SANS_refine/builddir=release_gnu9,buildnode=reynolds #120

Duration: 30 min

Compiler Errors

/jenkins/workspace/SANS_refine/builddir/release_gnu9/buildnode/reynolds/src/Meshing/refine/XField_refine.cpp:109:59: error: cannot convert &lsquo,REF_INT*&rsquo, {aka &lsquo,int*&rsquo,} to &lsquo,const char*&rsquo,
/jenkins/workspace/SANS_refine/builddir/release_gnu9/buildnode/reynolds/src/Meshing/refine/XField_refine.cpp:126:59: error: cannot convert &lsquo,REF_INT*&rsquo, {aka &lsquo,int*&rsquo,} to &lsquo,const char*&rsquo,

SANS_refine/builddir=release_intel,buildnode=reynolds #120

Duration: 36 min

Compiler Errors

/jenkins/workspace/SANS_refine/builddir/release_intel/buildnode/reynolds/src/Meshing/refine/XField_refine.cpp(105): error: argument of type ",REF_INT={int} *", is incompatible with parameter of type ",const char *",
/jenkins/workspace/SANS_refine/builddir/release_intel/buildnode/reynolds/src/Meshing/refine/XField_refine.cpp(122): error: argument of type ",REF_INT={int} *", is incompatible with parameter of type ",const char *",
, Mike.Park@nasa.gov Sending email to: galbramc@mit.edu [PostBuildScript] - [INFO] Executing post build scripts. [PostBuildScript] - [INFO] Build does not have any of the results [SUCCESS]. Did not execute build step #0. Finished: FAILURE