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Executable/home1/jenkins/workspace/ProjectX_Weekly/PX_ARC/relwithdebinfo_gnu/buildnode/reynolds/platforms/relwithdebinfo_gnu/bin/ProjectXExec
PID26354
PPID16382
Unique ID0xf86
Text256 bytes in 1 blocks are still reachable in loss record 3,973 of 4,624
Auxiliary
Suppression{
   <insert_a_suppression_name_here>
   Memcheck:Leak
   match-leak-kinds: reachable
   fun:malloc
   fun:PXAllocate2
   fun:PXCreateLocAttachGlobRealElem
   fun:PXCreateAttachGlobRealElem
   fun:PXCreateAttachGREInit
   fun:PXComputeErrorEstimate
   fun:PXErrorIndicatorOutput
   fun:PXFillAttachmentSet
   fun:PXAdaptHPDirectSingleStep
   fun:PXAdaptHPDirectSingleStepWrapper
   fun:PXSolveUnsteadyDualProblem
   fun:PXSolveDual
   fun:PXPSequencing
   fun:main
}

Stacktrace

Object/usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so
Functionmalloc
File/Line
CodeSource code not available

Object/home1/jenkins/workspace/ProjectX_Weekly/PX_ARC/relwithdebinfo_gnu/buildnode/reynolds/platforms/relwithdebinfo_gnu/bin/ProjectXExec
FunctionPXAllocate2
File/Line/home1/jenkins/workspace/ProjectX_Weekly/PX_ARC/relwithdebinfo_gnu/buildnode/reynolds/src/Fundamentals/PXMemory.c:146
Code
136     *po=NULL;
137     return PX_NO_ERROR;
138   }
139 
140   if ( (_po   = (char **)malloc( n1*sizeof(char *) )) == NULL ){
141     *po=NULL;
142     return PXError(PX_MEMORY_ERROR);
143   }
144 
145   if (n2 != 0){
146     if ( (temp = (char  *)malloc(tot)                 ) == NULL ) {
147       free(_po) ;
148       *po=NULL;
149       return PXError(PX_MEMORY_ERROR);
150     }
151 

Object/home1/jenkins/workspace/ProjectX_Weekly/PX_ARC/relwithdebinfo_gnu/buildnode/reynolds/platforms/relwithdebinfo_gnu/bin/ProjectXExec
FunctionPXCreateLocAttachGlobRealElem
File/Line/home1/jenkins/workspace/ProjectX_Weekly/PX_ARC/relwithdebinfo_gnu/buildnode/reynolds/src/Grid/PXGridAttachments.c:1534
Code
1524   (*GlobRealElemData)->stepIndex = 0;
1525 
1526   /*--------------------------*/
1527   /* Allocate space for Value */
1528   /*--------------------------*/
1529   PXErrorReturn( PXAllocate( negrp+nghostegrp, sizeof(PX_REAL **), (void **)&((*GlobRealElemData)->value) ) );
1530 
1531   for (egrp = 0; egrp < negrp+nghostegrp; egrp++) {
1532     /* printf("egrp = %d, allocated (nelem x rank) = (%d,%d)\n",egrp,pg->ElementGroup[egrp].nElement,(*GlobRealElemData)->rank[egrp%negrp]); */
1533     (*GlobRealElemData)->value[egrp] = NULL;
1534     PXErrorReturn( PXAllocate2( pg->ElementGroup[egrp].nElement, (*GlobRealElemData)->rank[egrp%negrp], sizeof(PX_REAL), (void **)&((*GlobRealElemData)->value[egrp]) ) );
1535   }
1536 
1537   /* Parallel Data */
1538   (*GlobRealElemData)->recv_request = NULL;
1539   if ( ParallelFlag == PXE_True ) {

Object/home1/jenkins/workspace/ProjectX_Weekly/PX_ARC/relwithdebinfo_gnu/buildnode/reynolds/platforms/relwithdebinfo_gnu/bin/ProjectXExec
FunctionPXCreateAttachGlobRealElem
File/Line/home1/jenkins/workspace/ProjectX_Weekly/PX_ARC/relwithdebinfo_gnu/buildnode/reynolds/src/Grid/PXGridAttachments.c:1897
Code
1887 
1888   /* Create Generic Attachment */
1889   PXErrorReturn( PXCreateGenAttach( pg, title, &an ) );
1890 
1891 /*   printf("                                                                                                   title = %s\n",title); */
1892 
1893   /* Set Attachment Type */
1894   pg->Attachment[an].type = PXE_AttachmentGlobRealElem;
1895 
1896   /* Create Local Attachment */
1897   PXErrorReturn( PXCreateLocAttachGlobRealElem( pg, order, StateRank, (PX_AttachmentGlobRealElem **) &(pg->Attachment[an].data)) );
1898 
1899   /* Set Reader and Write */
1900   pg->Attachment[an].Writer = PXWriteLocAttachGlobRealElem;
1901   pg->Attachment[an].Reader = PXReadLocAttachGlobRealElem;
1902 

Object/home1/jenkins/workspace/ProjectX_Weekly/PX_ARC/relwithdebinfo_gnu/buildnode/reynolds/platforms/relwithdebinfo_gnu/bin/ProjectXExec
FunctionPXCreateAttachGREInit
File/Line/home1/jenkins/workspace/ProjectX_Weekly/PX_ARC/relwithdebinfo_gnu/buildnode/reynolds/src/Grid/PXGridAttachments.c:2089
Code
2079   if ( StateRankIn != 0 )
2080     StateRank = StateRankIn;
2081   else if ( GREDInit != NULL )
2082     StateRank = GREDInit->StateRank;
2083 
2084   /* Create GRE as (local) attachments */
2085   if ( LocFlag == PXE_False ){
2086     ierr = PXAttachSearch( pg, titleIn, &an, (void**) pGREData );
2087 
2088     if ( ierr == PX_SEARCH_NOT_FOUND ){
2089       PXErrorReturn( PXCreateAttachGlobRealElem( pg, titleIn, order, StateRank,
2090                                                  pGREData ) );
2091 
2092       /* set SaveToFile flag */
2093       PXErrorReturn( PXAttachSearch( pg, titleIn, &an, NULL) );
2094       pg->Attachment[an].SaveToFile = SaveToFileFlag;

Object/home1/jenkins/workspace/ProjectX_Weekly/PX_ARC/relwithdebinfo_gnu/buildnode/reynolds/platforms/relwithdebinfo_gnu/bin/ProjectXExec
FunctionPXComputeErrorEstimate
File/Line/home1/jenkins/workspace/ProjectX_Weekly/PX_ARC/relwithdebinfo_gnu/buildnode/reynolds/src/PXErrEst.c:270
Code
0260     ErrorIndicator = *ErrorIndicatorIn;
0261   }
0262 
0263   if ( ErrorIndicator == NULL ){
0264     sprintf(title, "ErrorIndicator");
0265     LocFlag = PXE_False;
0266     time = 0.0; stepIndex = 0;
0267     SaveToFileFlag = PXE_True;
0268     TransferFlag = PXE_False;
0269     DataType = PXE_AttachmentDataType_ElemErr;
0270     PXErrorReturn( PXCreateAttachGREInit( pg, LocFlag, title, NULL,
0271                                           indicatorRank, time, stepIndex,
0272                                           DataType, SaveToFileFlag, TransferFlag,
0273                                           NULL, &ErrorIndicator ) );
0274   }
0275 

Object/home1/jenkins/workspace/ProjectX_Weekly/PX_ARC/relwithdebinfo_gnu/buildnode/reynolds/platforms/relwithdebinfo_gnu/bin/ProjectXExec
FunctionPXErrorIndicatorOutput
File/Line/home1/jenkins/workspace/ProjectX_Weekly/PX_ARC/relwithdebinfo_gnu/buildnode/reynolds/src/PXErrEst.c:1667
Code
1657 
1658   /*----------------------------*/
1659   /* Compute the error estimate */
1660   /*----------------------------*/
1661   if ( UnsteadyFlag == PXE_False && PrintFlag == PXE_True ){
1662     PXPrintf("\n------------------------\n");
1663     PXPrintf(  " Compute Error Estimate \n");
1664     PXPrintf(  "------------------------\n\n");
1665   }
1666 
1667   PXErrorReturn( PXComputeErrorEstimate(pxa, currentIndex,
1668                                         DualErrorFlag, IndicatorDetail,
1669                                         StageState, AdaptStageAdjState,
1670                                         TSStageState, ProStageResidual,
1671                                         TSAdaptStageAdjState, ProAdaptStageAdjResidual,
1672                                         ErrorIndicatorIn, ErrorEstPrimalResIn, ErrorEstDualResIn,

Object/home1/jenkins/workspace/ProjectX_Weekly/PX_ARC/relwithdebinfo_gnu/buildnode/reynolds/platforms/relwithdebinfo_gnu/bin/ProjectXExec
FunctionPXFillAttachmentSet
File/Line/home1/jenkins/workspace/ProjectX_Weekly/PX_ARC/relwithdebinfo_gnu/buildnode/reynolds/src/PXHPAdaptDirect.c:2311
Code
2301                &(AttachSet->TSNextStageAdjState) ) );
2302     }
2303   }
2304 
2305   AttachSet->nStage        = nStage;
2306   AttachSet->nPrevState    = nPrevState;
2307   AttachSet->maxNStage     = maxNStage;
2308   AttachSet->maxNPrevState = maxNPrevState;
2309 
2310   /* Perform error estimate */
2311   PXErrorReturn(PXErrorIndicatorOutput( pxa,UnsteadyIndex,UnsteadyStruct,
2312           UnsteadyFlag, PXE_True, PXE_False,
2313           PXE_False, PXE_False,
2314           AttachSet->StageState,AttachSet->PrevState,
2315           AttachSet->StageAdjState,AttachSet->NextStageAdjState,
2316           NULL,NULL,NULL,

Object/home1/jenkins/workspace/ProjectX_Weekly/PX_ARC/relwithdebinfo_gnu/buildnode/reynolds/platforms/relwithdebinfo_gnu/bin/ProjectXExec
FunctionPXAdaptHPDirectSingleStep
File/Line/home1/jenkins/workspace/ProjectX_Weekly/PX_ARC/relwithdebinfo_gnu/buildnode/reynolds/src/PXHPAdaptDirect.c:7757
Code
7747   /* compute truth surrogate and error indicator*/
7748   PXErrorReturn(PXInitAttachSet(AttachSet));
7749 #ifdef PX_TIMING
7750   PXBarrier();
7751   c0 = PXclock();
7752 #endif
7753 
7754 #if( PX_UNIT_TEST==1 )
7755   PXErrorReturn(PXFillAttachmentSetDummy(pxa,AttachSet,pErrorEstSum,pErrorEstAbsSum));
7756 #else
7757   PXErrorReturn(PXFillAttachmentSet(pxa,AttachSet,UnsteadyIndex,pErrorEstSum,pErrorEstAbsSum));
7758 #endif
7759 
7760   if ( porder0 != NULL ) *porder0 = AttachSet->StageState[0]->order[0];
7761 #ifdef PX_TIMING
7762   PXBarrier();

Object/home1/jenkins/workspace/ProjectX_Weekly/PX_ARC/relwithdebinfo_gnu/buildnode/reynolds/platforms/relwithdebinfo_gnu/bin/ProjectXExec
FunctionPXAdaptHPDirectSingleStepWrapper
File/Line/home1/jenkins/workspace/ProjectX_Weekly/PX_ARC/relwithdebinfo_gnu/buildnode/reynolds/src/PXHPAdaptDirect.c:7869
Code
7859   else {
7860     pgmesh = pg->pgback;
7861     if (pgmesh == NULL) PXErrorReturn(PX_BAD_INPUT);
7862   }
7863   PXErrorReturn(PXConvertGrid2Mesh(pgmesh,meshback,Mesh2GridMap));
7864 
7865   /* Initialize elemerror */
7866   PXErrorReturn(PXAllocateElementError(meshback,ElemError));
7867 
7868   /* Fill element error for this single step */
7869   PXErrorReturn( PXAdaptHPDirectSingleStep( pxa, UnsteadyIndex,
7870                                             meshback, Mesh2GridMap, ElemError, NULL,
7871                                             pErrorEstSum, pErrorEstAbsSum ) );
7872 
7873   /* Retrieve error and metric GRE attachments */
7874   PXErrorReturn( PXAttachSearch(pgmesh,"ElemError0",NULL,(void *)&ElemError0) );

Object/home1/jenkins/workspace/ProjectX_Weekly/PX_ARC/relwithdebinfo_gnu/buildnode/reynolds/platforms/relwithdebinfo_gnu/bin/ProjectXExec
FunctionPXSolveUnsteadyDualProblem
File/Line/home1/jenkins/workspace/ProjectX_Weekly/PX_ARC/relwithdebinfo_gnu/buildnode/reynolds/src/PXSolver.c:10865
Code
10855                                                               &ErrorEstSum, &ErrorEstAbsSum) );
10856 
10857       }
10858       else
10859       {
10860 
10861 #ifdef PX_TIMING
10862         c0 = PXclock();
10863 #endif
10864         /* Build grid and fill ElemError structure */
10865         PXErrorReturn( PXAdaptHPDirectSingleStepWrapper(pxa, currentIndex,
10866                                                         &ErrorEstSum, &ErrorEstAbsSum) );
10867 #ifdef PX_TIMING
10868         c1 = PXclock();
10869         PXPrintf("Time : (DualSolve(P+1andLocSolve)) = %f\n", c1-c0 );
10870 #endif

Object/home1/jenkins/workspace/ProjectX_Weekly/PX_ARC/relwithdebinfo_gnu/buildnode/reynolds/platforms/relwithdebinfo_gnu/bin/ProjectXExec
FunctionPXSolveDual
File/Line/home1/jenkins/workspace/ProjectX_Weekly/PX_ARC/relwithdebinfo_gnu/buildnode/reynolds/src/PXRunSolver.c:529
Code
0519   PXErrorReturn( PXGetKeyValueInt( pxa->Parameter, "AdaptIter", &AdaptIter ) );
0520 
0521   /*--------------------*/
0522   /* Solve Dual Problem */
0523   /*--------------------*/
0524 
0525   PXPrintf("\n*************\n");
0526   PXPrintf(  " Dual Solver \n");
0527   PXPrintf(  "*************\n");
0528 
0529   PXErrorReturn( PXSolveUnsteadyDualProblem(pxa, &AdaptFlag, &ConvergedFlag) );
0530 
0531   /*-------------------*/
0532   /* Write Output File */
0533   /*-------------------*/
0534 

Object/home1/jenkins/workspace/ProjectX_Weekly/PX_ARC/relwithdebinfo_gnu/buildnode/reynolds/platforms/relwithdebinfo_gnu/bin/ProjectXExec
FunctionPXPSequencing
File/Line/home1/jenkins/workspace/ProjectX_Weekly/PX_ARC/relwithdebinfo_gnu/buildnode/reynolds/src/PXRunSolver.c:710
Code
0700       if ( iSolOrder == SolOrder ){
0701   iAdaptFlag = AdaptFlag;
0702       } else {
0703   iAdaptFlag = PXE_False;
0704       }
0705 
0706 #ifdef PX_TIMING
0707     PXBarrier();
0708     c0 = PXclock();
0709 #endif
0710       PXErrorReturn( PXSolveDual(pxa, iAdaptFlag, aiter, &ConvergedFlag, &iSolOrder) );
0711 #ifdef PX_TIMING
0712     PXBarrier();
0713     c1 = PXclock();
0714     PXPrintf("Time : (DualSolveTotal) = %f\n", c1-c0 );
0715 #endif

Object/home1/jenkins/workspace/ProjectX_Weekly/PX_ARC/relwithdebinfo_gnu/buildnode/reynolds/platforms/relwithdebinfo_gnu/bin/ProjectXExec
Functionmain
File/Line/home1/jenkins/workspace/ProjectX_Weekly/PX_ARC/relwithdebinfo_gnu/buildnode/reynolds/src/PXRunSolver.c:999
Code
0989     PXErrorReturn( PXInitializeAdaptIter( pxa, aiter ) );
0990     //pg = pxa->pg;
0991 
0992 #ifdef PX_TIMING
0993     PXBarrier();
0994     c2=PXclock();
0995     PXPrintf("Time : (InitializeAdaptIter) = %f\n", c2 - c1 );
0996 #endif
0997 
0998     /* Perform PSequencing */
0999     PXErrorReturn( PXPSequencing( pxa, AdaptFlag, aiter, &ConvergedFlag ) );
1000 
1001 #ifdef PX_TIMING
1002     PXBarrier();
1003     c1=PXclock();
1004     PXPrintf("Time : (PXPSequencing) = %f\n",  c1 - c2);