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Started by upstream project "SANS_Nightly" build number 1599 originally caused by: Started by an SCM change Running as SYSTEM [EnvInject] - Loading node environment variables. Building remotely on macys in workspace /Users/jenkins/workspace/SANS_Nightly/builddir/memcheck_clang/buildnode/macys The recommended git tool is: NONE using credential 3614a4cf-01de-4393-97de-73734b7dd5a2 Cloning the remote Git repository > JGit fetch # timeout=10 Verifying host key for acdl.mit.edu using /Users/jenkins/.ssh/known_hosts remote: Enumerating objects remote: Counting objects remote: Compressing objects Receiving objects Resolving deltas Avoid second fetch Merging Revision ef0f7a1d0cec35532182354a23fa20be1d4da130 (refs/remotes/acdl/develop) to acdl/apprentice, UserMergeOptions{mergeRemote='acdl', mergeTarget='apprentice', mergeStrategy='DEFAULT', fastForwardMode='FF'} Checking out Revision ef0f7a1d0cec35532182354a23fa20be1d4da130 (acdl/develop, acdl/galbramc/develop, HEAD, acdl/apprentice) Commit message: "Add more suitesparse search paths. Add Nozzle outflow BC unit test." Using 'Changelog to branch' strategy. The recommended git tool is: NONE using credential 3614a4cf-01de-4393-97de-73734b7dd5a2 The recommended git tool is: NONE using credential 3614a4cf-01de-4393-97de-73734b7dd5a2 [GitCheckoutListener] Recording commits of 'git ssh://jenkins@acdl.mit.edu/home/svnroot/SANSproto/' [GitCheckoutListener] Found previous build 'SANS_Nightly/builddir=memcheck_clang,buildnode=macys #1598' that contains recorded Git commits [GitCheckoutListener] -> Starting recording of new commits since '54fd5d4' [GitCheckoutListener] -> Single parent commit found - branch is already descendant of target branch head [GitCheckoutListener] -> Using head commit 'ef0f7a1' as starting point [GitCheckoutListener] -> Recorded 2 new commits [GitCheckoutListener] -> Git commit decorator could not be created for SCM 'hudson.plugins.git.GitSCM@efa6b7c' [macys] $ /bin/bash -xe /var/folders/xs/_fh4l1p54zqcl6mbk4zclcfr0000gp/T/jenkins7489039718419459062.sh + ssh acdl.mit.edu rm -f SANS_Commit_SUCCESS SANS_Nightly_FAILURE [macys] $ /bin/bash -xe /var/folders/xs/_fh4l1p54zqcl6mbk4zclcfr0000gp/T/jenkins14020948927491999044.sh + /bin/bash -ex /Users/jenkins/workspace/SANS_Nightly/builddir/memcheck_clang/buildnode/macys/scripts/jenkins/SANS_Nightly.sh + source /Users/jenkins/workspace/SANS_Nightly/builddir/memcheck_clang/buildnode/macys/scripts/jenkins/copy_external.sh +++ hostname ++ [[ macys.mit.edu == \r\e\y\n\o\l\d\s* ]] +++ hostname ++ [[ macys.mit.edu == \m\a\c\y\s* ]] ++ cp /Users/jenkins/util/SANSexternal/tetgen1.5.0.tar.gz /Users/jenkins/util/SANSexternal/tetgen1.6.0.tar.gz /Users/jenkins/util/SANSexternal/triangle.zip /Users/jenkins/workspace/SANS_Nightly/builddir/memcheck_clang/buildnode/macys/external/ + cmakedir=/Users/jenkins/workspace/SANS_Nightly/builddir/memcheck_clang/buildnode/macys/build/memcheck_clang + rm -rf /Users/jenkins/workspace/SANS_Nightly/builddir/memcheck_clang/buildnode/macys/build + mkdir -p /Users/jenkins/workspace/SANS_Nightly/builddir/memcheck_clang/buildnode/macys/build/memcheck_clang + cd /Users/jenkins/workspace/SANS_Nightly/builddir/memcheck_clang/buildnode/macys/build/memcheck_clang + source /Users/jenkins/workspace/SANS_Nightly/builddir/memcheck_clang/buildnode/macys/scripts/jenkins/jenkins_env.sh ++ shopt -s nocasematch +++ pwd ++ dir=/Users/jenkins/workspace/SANS_Nightly/builddir/memcheck_clang/buildnode/macys/build/memcheck_clang +++ basename /Users/jenkins/workspace/SANS_Nightly/builddir/memcheck_clang/buildnode/macys/build/memcheck_clang ++ builddir=memcheck_clang ++ export AFLR_VERSION=10.17.5 ++ AFLR_VERSION=10.17.5 ++ CAS_VERSION=7.6.0 +++ hostname ++ [[ macys.mit.edu == *\r\e\y\n\o\l\d\s* ]] +++ hostname ++ [[ macys.mit.edu == *\m\a\c\y\s* ]] ++ export PATH=/usr/local/bin:/usr/local/sbin:/usr/local/opt/python/libexec/bin:/usr/bin:/bin:/usr/sbin:/sbin ++ PATH=/usr/local/bin:/usr/local/sbin:/usr/local/opt/python/libexec/bin:/usr/bin:/bin:/usr/sbin:/sbin ++ export LAPACK_DIR=/usr/local/opt/lapack/ ++ LAPACK_DIR=/usr/local/opt/lapack/ ++ export ESP_DIR=/Users/jenkins/util/ESP/EngSketchPad ++ ESP_DIR=/Users/jenkins/util/ESP/EngSketchPad ++ export CAS_DIR=/Users/jenkins/util/ESP/OpenCASCADE-7.6.0 ++ CAS_DIR=/Users/jenkins/util/ESP/OpenCASCADE-7.6.0 ++ export AFLR_DIR=/Users/jenkins/util/AFLR/aflr_lib_10.17.5 ++ AFLR_DIR=/Users/jenkins/util/AFLR/aflr_lib_10.17.5 +++ ls -d /Users/jenkins/util/PETSc/petsc/install_dir ++ export PETSC_DIR=/Users/jenkins/util/PETSc/petsc/install_dir ++ PETSC_DIR=/Users/jenkins/util/PETSc/petsc/install_dir ++ export PARMETIS_DIR=/Users/jenkins/util/parmetis/parmetis-4.0.3/install ++ PARMETIS_DIR=/Users/jenkins/util/parmetis/parmetis-4.0.3/install ++ export PATH=/Users/jenkins/util/fefloa/bin:/usr/local/bin:/usr/local/sbin:/usr/local/opt/python/libexec/bin:/usr/bin:/bin:/usr/sbin:/sbin ++ PATH=/Users/jenkins/util/fefloa/bin:/usr/local/bin:/usr/local/sbin:/usr/local/opt/python/libexec/bin:/usr/bin:/bin:/usr/sbin:/sbin ++ export Boost_NO_SYSTEM_PATHS=OFF ++ Boost_NO_SYSTEM_PATHS=OFF ++ export ASAN_OPTIONS=detect_odr_violation=0 ++ ASAN_OPTIONS=detect_odr_violation=0 ++ env ++ hostname + [[ macys.mit.edu == *\r\e\y\n\o\l\d\s* ]] + [[ memcheck_clang == *\c\p\p\c\h\e\c\k* ]] + [[ memcheck_clang == *\r\e\l\e\a\s\e* ]] + [[ memcheck_clang == *\r\e\l\e\a\s\e* ]] + [[ memcheck_clang != *\i\n\t\e\l* ]] + CMAKE_ARGS+=' -DUSE_LAPACK=ON' + source /Users/jenkins/workspace/SANS_Nightly/builddir/memcheck_clang/buildnode/macys/scripts/jenkins/cmake_jenkins.sh -DUSE_HEADERCHECK=OFF -DUSE_MPI=OFF '-DVALGRIND_MEMCHECK_FLAGS=--xml=yes;--xml-file=/Users/jenkins/workspace/SANS_Nightly/builddir/memcheck_clang/buildnode/macys/build/memcheck_clang/test/valgrind.%p.memcheck.xml' -DCCACHE_MAX_SIZE=10G -DCCACHE_CONFIGPATH=/Users/jenkins/SANS_ccache/builddir/memcheck_clang/buildnode/macys -DUSE_LAPACK=ON +++ git rev-parse --show-toplevel ++ WORKSPACE=/Users/jenkins/workspace/SANS_Nightly/builddir/memcheck_clang/buildnode/macys +++ uname -a ++ [[ Darwin macys.mit.edu 22.6.0 Darwin Kernel Version 22.6.0: Tue Nov 7 21:48:06 PST 2023; root:xnu-8796.141.3.702.9~2/RELEASE_X86_64 x86_64 == \D\a\r\w\i\n* ]] ++ CMAKEARGS=' -DMPIEXEC_MAX_NUMPROCS=2' +++ hostname ++ [[ macys.mit.edu == \r\e\y\n\o\l\d\s ]] +++ hostname ++ [[ macys.mit.edu == \m\a\c\y\s* ]] ++ CMAKEARGS=' -DMPIEXEC_MAX_NUMPROCS=2 -DUSE_TETGEN=ON -DUSE_TRIANGLE=ON' ++ cmake -DBoost_NO_SYSTEM_PATHS=OFF -DXDIR_DEFAULT=ON -DUI_CAPSAIM=ON -DUI_OPENCSM_UDF=ON -DMPIEXEC_MAX_NUMPROCS=2 -DUSE_TETGEN=ON -DUSE_TRIANGLE=ON -DUSE_HEADERCHECK=OFF -DUSE_MPI=OFF '-DVALGRIND_MEMCHECK_FLAGS=--xml=yes;--xml-file=/Users/jenkins/workspace/SANS_Nightly/builddir/memcheck_clang/buildnode/macys/build/memcheck_clang/test/valgrind.%p.memcheck.xml' -DCCACHE_MAX_SIZE=10G -DCCACHE_CONFIGPATH=/Users/jenkins/SANS_ccache/builddir/memcheck_clang/buildnode/macys -DUSE_LAPACK=ON /Users/jenkins/workspace/SANS_Nightly/builddir/memcheck_clang/buildnode/macys CMake Deprecation Warning at CMakeLists.txt:3 (CMAKE_MINIMUM_REQUIRED): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument <min> value or use a ...<max> suffix to tell CMake that the project does not need compatibility with older versions. _____ ___ _ _______ / ___// | / | / / ___/ \__ \/ /| | / |/ /\__ \ ___/ / ___ |/ /| /___/ / /____/_/ |_/_/ |_//____/ Solution Adaptive Numerical Simulator -- The CXX compiler identification is AppleClang 15.0.0.15000100 -- The C compiler identification is AppleClang 15.0.0.15000100 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/clang++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/clang - skipped -- Detecting C compile features -- Detecting C compile features - done -- Performing Test CPP11_AUTO_COMPILES -- Performing Test CPP11_AUTO_COMPILES - Success -- Performing Test CPP11_SHAREDPTR_COMPILES -- Performing Test CPP11_SHAREDPTR_COMPILES - Success -- Could NOT find PkgConfig (missing: PKG_CONFIG_EXECUTABLE) -- Could NOT find PETSC (missing: PETSC_INCLUDE_DIRS) -- Found Python3: /usr/local/Frameworks/Python.framework/Versions/3.12/bin/python3.12 (found version "3.12.1") found components: Interpreter Development NumPy Development.Module Development.Embed -- Found Boost: /usr/local/include (found suitable version "1.83.0", minimum required is "1.50") found components: unit_test_framework iostreams filesystem system regex -- Found Boost: /usr/local/include (found version "1.83.0") found components: unit_test_framework iostreams filesystem system python312 numpy312 regex -- Performing Test BOOSTPYTHON_TEST -- Performing Test BOOSTPYTHON_TEST - Success -- Found NLOPT: /usr/local/lib/libnlopt.dylib -- Performing Test NLOPT_TEST -- Performing Test NLOPT_TEST - Success -- Found EGADS: /Users/jenkins/util/ESP/EngSketchPad/lib/libegads.dylib -- Performing Test EGADS_TEST -- Performing Test EGADS_TEST - Success -- Found CAPS: /Users/jenkins/util/ESP/EngSketchPad/lib/libaimUtil.a -- Performing Test CAPS_TEST -- Performing Test CAPS_TEST - Success -- Looking for sgemm_ -- Looking for sgemm_ - not found -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Looking for dgemm_ -- Looking for dgemm_ - found -- Found BLAS: /Library/Developer/CommandLineTools/SDKs/MacOSX14.2.sdk/System/Library/Frameworks/Accelerate.framework -- Found Accelerate BLAS -- Performing Test CBLAS_TEST -- Performing Test CBLAS_TEST - Success -- Could NOT find SUITESPARSE (missing: SUITESPARSE_INCLUDE_DIRS) ================================= SANS will download and compile SuiteSparse for you. Compiling SuiteSparse is time consuming. Alternatively, you may install the SuiteSparse with a package manager. Or download and compile SuiteSparse and set $SUITESPARSE_DIR to the root directory containing the MakeFile. You can also set $SUITESPARSE_INCLUDE and $SUITESPARSE_LIB to separate suitesparse include and library directories. ================================= -- Checking for /Users/jenkins/workspace/SANS_Nightly/builddir/memcheck_clang/buildnode/macys/external/SuiteSparse.tar.gz -- Downloading and compiling SUITESPARSE from https://github.com/DrTimothyAldenDavis/SuiteSparse.git -- Could NOT find REFINE (missing: REFINE_LIBRARIES REFINE_INCLUDE_DIRS) -- Found LAPACK: /Library/Developer/CommandLineTools/SDKs/MacOSX14.2.sdk/System/Library/Frameworks/Accelerate.framework -- Performing Test LAPACK_TEST -- Performing Test LAPACK_TEST - Success -- Could NOT find TETGEN (missing: TETGEN_LIBRARIES TETGEN_INCLUDE_DIRS) -- Checking for /Users/jenkins/workspace/SANS_Nightly/builddir/memcheck_clang/buildnode/macys/external/tetgen1.6.0.tar.gz -- Using /Users/jenkins/workspace/SANS_Nightly/builddir/memcheck_clang/buildnode/macys/external/tetgen1.6.0.tar.gz -- Could NOT find AVRO (missing: AVRO_LIBRARY) -- Checking for /Users/jenkins/workspace/SANS_Nightly/builddir/memcheck_clang/buildnode/macys/external/triangle.zip -- Using /Users/jenkins/workspace/SANS_Nightly/builddir/memcheck_clang/buildnode/macys/external/triangle.zip -- Could NOT find SEACAS (missing: SEACAS_LIBRARIES) -- Found AFLR: /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libaflr3.a -- Performing Test AFLR_TEST -- Performing Test AFLR_TEST - Success -- Please install qcachegrind for graphical profiling. -- Please install massif-visualizer for graphical heap memory usage. ############################################# # # SANS configuration: # # CMAKE_BUILD_TYPE: Memcheck # CMAKE_INSTALL_PREFIX: /usr/local # CMAKE_CXX_COMPILER name: Clang 15.0.0.15000100 on platform Darwin x86_64 # CMAKE_CXX_COMPILER path: /usr/bin/clang++ # # CMAKE_CXX_IMPLICIT_INCLUDE_DIRECTORIES: # # /Library/Developer/CommandLineTools/SDKs/MacOSX14.2.sdk/usr/include/c++/v1 # /Library/Developer/CommandLineTools/usr/lib/clang/15.0.0/include # /Library/Developer/CommandLineTools/SDKs/MacOSX14.2.sdk/usr/include # /Library/Developer/CommandLineTools/usr/include # # CMAKE_CXX_IMPLICIT_LINK_DIRECTORIES: # # # Compiler flags used for this build: # # CMAKE_CXX_FLAGS: -std=c++11 -Wall -Wstrict-aliasing # -Wnon-virtual-dtor -pedantic -Wno-variadic-macros # -Wno-#pragma-messages -Wno-undefined-var-template -fstrict-aliasing # -fPIC # # CMAKE_CXX_FLAGS_MEMCHECK: -g -Os -fsanitize=address # -fno-omit-frame-pointer -fno-optimize-sibling-calls # # Required dependencies: # # EGADS -----------> Met with existing library: # Include Directories: # /Users/jenkins/util/ESP/EngSketchPad/include # Libraries: # /Users/jenkins/util/ESP/EngSketchPad/lib/libegads.dylib # # Boost -----------> Met with existing library: # Include Directories: # /usr/local/include # Libraries: # /usr/local/lib/libboost_unit_test_framework-mt.dylib # /usr/local/lib/libboost_iostreams-mt.dylib # /usr/local/lib/libboost_filesystem-mt.dylib # /usr/local/lib/libboost_system-mt.dylib # /usr/local/lib/libboost_python312-mt.dylib # /usr/local/lib/libboost_numpy312-mt.dylib # /usr/local/lib/libboost_regex-mt.dylib # # PYTHON ----------> Met with existing library: # Include Directories: # /usr/local/opt/python@3.12/Frameworks/Python.framework/Versions/3.12/include/python3.12 # Libraries: # /usr/local/opt/python@3.12/Frameworks/Python.framework/Versions/3.12/lib/libpython3.12.dylib # # NLOPT -----------> Met with existing library: # Include Directories: # /usr/local/include # Libraries: # /usr/local/lib/libnlopt.dylib # # SUITESPARSE -----> Met with internal build -- Could not find library. # Include Directories: # /Users/jenkins/workspace/SANS_Nightly/builddir/memcheck_clang/buildnode/macys/build/memcheck_clang/libSuiteSparse-prefix/install/include # Libraries: # /Users/jenkins/workspace/SANS_Nightly/builddir/memcheck_clang/buildnode/macys/build/memcheck_clang/libSuiteSparse-prefix/install/lib/libumfpack.dylib # /Users/jenkins/workspace/SANS_Nightly/builddir/memcheck_clang/buildnode/macys/build/memcheck_clang/libSuiteSparse-prefix/install/lib/libamd.dylib # /Users/jenkins/workspace/SANS_Nightly/builddir/memcheck_clang/buildnode/macys/build/memcheck_clang/libSuiteSparse-prefix/install/lib/libcholmod.dylib # /Users/jenkins/workspace/SANS_Nightly/builddir/memcheck_clang/buildnode/macys/build/memcheck_clang/libSuiteSparse-prefix/install/lib/libcolamd.dylib # /Users/jenkins/workspace/SANS_Nightly/builddir/memcheck_clang/buildnode/macys/build/memcheck_clang/libSuiteSparse-prefix/install/lib/libsuitesparseconfig.dylib # # BLAS ------------> Met with existing library: # Include Directories: # Libraries: # /Library/Developer/CommandLineTools/SDKs/MacOSX14.2.sdk/System/Library/Frameworks/Accelerate.framework # # METIS -----------> Met with existing library: # Libraries: # /usr/local/lib/libmetis.dylib # # Optional dependencies: # # AFLR ------------> ON. -- Met with existing library: # Include Directories: # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/src # Libraries: # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libanbl3.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libbl1.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libaflr4.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libaflr3.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libaflr2c.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libice3.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libice2.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libotb.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libdftr2.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libdftr3.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libsurf_auto_cpp.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libsurf_auto.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libaflr4.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libdgeom.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/librec3.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/librec2.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libug.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libug3.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libug2.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libuvmap.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libegen.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libqtb.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libug_gq.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libotb.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libug_mp.a # # AVRO ------------> OFF -- Could not find library. # # CAPS ------------> ON. -- Met with existing library: # Include Directories: # /Users/jenkins/util/ESP/EngSketchPad/include # Libraries: # /Users/jenkins/util/ESP/EngSketchPad/lib/libaimUtil.a # /Users/jenkins/util/ESP/EngSketchPad/lib/libocsm.dylib # /Users/jenkins/util/ESP/EngSketchPad/lib/libudunits2.dylib # # LAPACK ----------> ON. -- Met with existing library: # Libraries: # /Library/Developer/CommandLineTools/SDKs/MacOSX14.2.sdk/System/Library/Frameworks/Accelerate.framework # # MKL -------------> OFF. # # PETSC -----------> OFF -- Could not find library. # # REFINE ----------> OFF -- Could not find library. # # SEACAS ----------> OFF -- Could not find library. # # TECIO -----------> OFF. # # TETGEN ----------> ON. -- Met with internal build. -- Could not find library. # Include Directories: # /Users/jenkins/workspace/SANS_Nightly/builddir/memcheck_clang/buildnode/macys/build/memcheck_clang/libtetgen-prefix/src/libtetgen # Libraries: # /Users/jenkins/workspace/SANS_Nightly/builddir/memcheck_clang/buildnode/macys/build/memcheck_clang/libtetgen-prefix/src/libtetgen-build/libtet.a # # TRIANGLE --------> ON. -- Met with internal build. -- Could not find library. # Include Directories: # /Users/jenkins/workspace/SANS_Nightly/builddir/memcheck_clang/buildnode/macys/build/memcheck_clang/libtriangle-prefix/src/libtriangle # Libraries: # /Users/jenkins/workspace/SANS_Nightly/builddir/memcheck_clang/buildnode/macys/build/memcheck_clang/libtriangle-prefix/src/libtriangle/libtriangle.a # # MPI -------------> OFF. # ############################################# -- Configuring done (39.9s) -- Generating done (61.0s) -- Build files have been written to: /Users/jenkins/workspace/SANS_Nightly/builddir/memcheck_clang/buildnode/macys/build/memcheck_clang real 2m2.564s user 0m43.850s sys 0m47.649s + [[ memcheck_clang == *\c\p\p\c\h\e\c\k* ]] + source /Users/jenkins/workspace/SANS_Nightly/builddir/memcheck_clang/buildnode/macys/scripts/jenkins/make_external.sh +++ make -qp +++ awk -F: '/^[a-zA-Z0-9][^$#\/\t=]*:([^=]|$)/ {split($1,A,/ /);for(i in A)print A[i]}' +++ grep '^lib' +++ grep -v libMeshb +++ xargs ++ libexternal='libmeshb libtriangle libtetgen libSuiteSparse' +++ echo libmeshb libtriangle libtetgen libSuiteSparse ++ for lib in '`echo $libexternal`' ++ make libmeshb real 0m14.027s user 0m9.211s sys 0m0.411s ++ for lib in '`echo $libexternal`' ++ make libtriangle real 0m9.331s user 0m8.569s sys 0m0.502s ++ for lib in '`echo $libexternal`' ++ make libtetgen real 0m47.139s user 0m37.038s sys 0m1.848s ++ for lib in '`echo $libexternal`' ++ make libSuiteSparse real 0m42.631s user 0m31.183s sys 0m11.086s ++ cat libSuiteSparse.out Creating directories for 'libSuiteSparse' Performing download step (git clone) for 'libSuiteSparse' Cloning into 'SuiteSparse'... Switched to a new branch 'stable' branch 'stable' set up to track 'origin/stable'. Performing update step for 'libSuiteSparse' No patch step for 'libSuiteSparse' No configure step for 'libSuiteSparse' Performing build step for 'libSuiteSparse' -- Building SuiteSparse_config version: v7.4.0 (Dec 30, 2023) -- The C compiler identification is AppleClang 15.0.0.15000100 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /Library/Developer/CommandLineTools/usr/bin/clang - skipped -- Detecting C compile features -- Detecting C compile features - done -- Source: /Users/jenkins/workspace/SANS_Nightly/builddir/memcheck_clang/buildnode/macys/external/SuiteSparse/SuiteSparse_config -- Build: /Users/jenkins/workspace/SANS_Nightly/builddir/memcheck_clang/buildnode/macys/external/SuiteSparse/SuiteSparse_config/build -- Install lib: lib -- Install include: include/suitesparse -- Install bin: bin -- Install pkg-file: lib -- Install rpath: $ORIGIN -- Build rpath: -- Build type: Release -- Looking for a Fortran compiler -- Looking for a Fortran compiler - /usr/local/bin/gfortran -- The Fortran compiler identification is GNU 13.2.0 -- Checking whether Fortran compiler has -isysroot -- Checking whether Fortran compiler has -isysroot - yes -- Checking whether Fortran compiler supports OSX deployment target flag -- Checking whether Fortran compiler supports OSX deployment target flag - yes -- Detecting Fortran compiler ABI info -- Detecting Fortran compiler ABI info - done -- Check for working Fortran compiler: /usr/local/bin/gfortran - skipped -- Fortran: /usr/local/bin/gfortran -- Looking for a CUDA compiler -- Looking for a CUDA compiler - NOTFOUND -- CUDA: not found -- CUDA: not enabled -- Detecting Fortran/C Interface -- Detecting Fortran/C Interface - Found GLOBAL and MODULE mangling -- Could NOT find OpenMP_C (missing: OpenMP_C_FLAGS OpenMP_C_LIB_NAMES) -- Found OpenMP_Fortran: -fopenmp (found version "4.5") -- Could NOT find OpenMP (missing: OpenMP_C_FOUND) (found version "4.5") -- SuiteSparse has OpenMP: OFF -- SuiteSparse_config has OpenMP: OFF -- Looking for Intel 32-bit BLAS -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Could NOT find BLAS (missing: BLAS_LIBRARIES) -- Looking for 32-bit Apple BLAS -- Looking for Fortran dgemm -- Looking for Fortran dgemm - found -- Found BLAS: /Library/Developer/CommandLineTools/SDKs/MacOSX14.2.sdk/System/Library/Frameworks/Accelerate.framework -- Found Apple 32-bit BLAS -- OpenMP C libraries: -- OpenMP C include: -- OpenMP C flags: NOTFOUND -- BLAS libraries: /Library/Developer/CommandLineTools/SDKs/MacOSX14.2.sdk/System/Library/Frameworks/Accelerate.framework -- BLAS linker flags: -- BLAS include: -- ------------------------------------------------------------------------ -- SuiteSparse CMAKE report for: SuiteSparseConfig -- ------------------------------------------------------------------------ -- inside common SuiteSparse root: OFF -- install in SuiteSparse/lib and SuiteSparse/include: OFF -- build type: Release -- BUILD_SHARED_LIBS: ON -- BUILD_STATIC_LIBS: ON -- C compiler: /Library/Developer/CommandLineTools/usr/bin/clang -- C flags: -- C++ compiler: -- C++ flags: -- C Flags release: -O3 -DNDEBUG -- C++ Flags release: -- Fortran compiler: /usr/local/bin/gfortran -- compile definitions: BLAS_Apple -- BLAS integer: int32_t -- ------------------------------------------------------------------------ -- Configuring done (13.4s) CMake Error at CMakeLists.txt:189 (target_link_libraries): Target "SuiteSparseConfig" links to: OpenMP::OpenMP_C but the target was not found. Possible reasons include: * There is a typo in the target name. * A find_package call is missing for an IMPORTED target. * An ALIAS target is missing. CMake Error at CMakeLists.txt:194 (target_link_libraries): Target "SuiteSparseConfig_static" links to: OpenMP::OpenMP_C but the target was not found. Possible reasons include: * There is a typo in the target name. * A find_package call is missing for an IMPORTED target. * An ALIAS target is missing. -- Generating done (0.0s) CMake Generate step failed. Build files cannot be regenerated correctly. make[5]: *** [library] Error 1 make[4]: *** [library] Error 2 make[3]: *** [libSuiteSparse-prefix/src/libSuiteSparse-stamp/libSuiteSparse-build] Error 2 make[2]: *** [CMakeFiles/libSuiteSparse.dir/all] Error 2 make[1]: *** [CMakeFiles/libSuiteSparse.dir/rule] Error 2 make: *** [libSuiteSparse] Error 2 real 1m54.726s user 1m27.207s sys 0m13.961s + [[ memcheck_clang != *\m\e\m\c\h\e\c\k* ]] + [[ memcheck_clang == *\a\n\a\l\y\z\e* ]] + [[ memcheck_clang == *\c\p\p\c\h\e\c\k* ]] + [[ memcheck_clang == *\m\e\m\c\h\e\c\k* ]] + make check_unit 'CTESTARGS=-T Test' [ 0%] Built target libtriangle [ 0%] Performing update step for 'libSuiteSparse' [ 0%] No patch step for 'libSuiteSparse' [ 0%] No configure step for 'libSuiteSparse' [ 0%] Performing build step for 'libSuiteSparse' -- Building SuiteSparse_config version: v7.4.0 (Dec 30, 2023) -- Source: /Users/jenkins/workspace/SANS_Nightly/builddir/memcheck_clang/buildnode/macys/external/SuiteSparse/SuiteSparse_config -- Build: /Users/jenkins/workspace/SANS_Nightly/builddir/memcheck_clang/buildnode/macys/external/SuiteSparse/SuiteSparse_config/build -- Install lib: lib -- Install include: include/suitesparse -- Install bin: bin -- Install pkg-file: lib -- Install rpath: $ORIGIN -- Build rpath: -- Build type: Release -- Fortran: /usr/local/bin/gfortran -- CUDA: not found -- CUDA: not enabled -- Could NOT find OpenMP_C (missing: OpenMP_C_FLAGS OpenMP_C_LIB_NAMES) -- Could NOT find OpenMP (missing: OpenMP_C_FOUND) (found version "4.5") -- SuiteSparse has OpenMP: OFF -- SuiteSparse_config has OpenMP: OFF -- Looking for Intel 32-bit BLAS -- Could NOT find BLAS (missing: BLAS_LIBRARIES) -- Looking for 32-bit Apple BLAS -- Found Apple 32-bit BLAS -- OpenMP C libraries: -- OpenMP C include: -- OpenMP C flags: NOTFOUND -- BLAS libraries: /Library/Developer/CommandLineTools/SDKs/MacOSX14.2.sdk/System/Library/Frameworks/Accelerate.framework -- BLAS linker flags: -- BLAS include: -- ------------------------------------------------------------------------ -- SuiteSparse CMAKE report for: SuiteSparseConfig -- ------------------------------------------------------------------------ -- inside common SuiteSparse root: OFF -- install in SuiteSparse/lib and SuiteSparse/include: OFF -- build type: Release -- BUILD_SHARED_LIBS: ON -- BUILD_STATIC_LIBS: ON -- C compiler: /Library/Developer/CommandLineTools/usr/bin/clang -- C flags: -- C++ compiler: -- C++ flags: -- C Flags release: -O3 -DNDEBUG -- C++ Flags release: -- Fortran compiler: /usr/local/bin/gfortran -- compile definitions: BLAS_Apple -- BLAS integer: int32_t -- ------------------------------------------------------------------------ -- Configuring done (1.1s) CMake Error at CMakeLists.txt:189 (target_link_libraries): Target "SuiteSparseConfig" links to: OpenMP::OpenMP_C but the target was not found. Possible reasons include: * There is a typo in the target name. * A find_package call is missing for an IMPORTED target. * An ALIAS target is missing. CMake Error at CMakeLists.txt:194 (target_link_libraries): Target "SuiteSparseConfig_static" links to: OpenMP::OpenMP_C but the target was not found. Possible reasons include: * There is a typo in the target name. * A find_package call is missing for an IMPORTED target. * An ALIAS target is missing. -- Generating done (0.0s) CMake Generate step failed. Build files cannot be regenerated correctly. make[5]: *** [library] Error 1 make[4]: *** [library] Error 2 make[3]: *** [libSuiteSparse-prefix/src/libSuiteSparse-stamp/libSuiteSparse-build] Error 2 make[2]: *** [CMakeFiles/libSuiteSparse.dir/all] Error 2 make[1]: *** [test/unit/CMakeFiles/check_unit.dir/rule] Error 2 make: *** [check_unit] Error 2 real 0m10.749s user 0m9.264s sys 0m1.274s + status=1 ++ find /Users/jenkins/workspace/SANS_Nightly/builddir/memcheck_clang/buildnode/macys/build/memcheck_clang -name Test.xml + mv /Users/jenkins/workspace/SANS_Nightly/builddir/memcheck_clang/buildnode/macys/build/Test_unit_memcheck.xml usage: mv [-f | -i | -n] [-hv] source target mv [-f | -i | -n] [-v] source ... directory Build step 'Execute shell' marked build as failure [GNU C Compiler (gcc)ClangIntel Compiler (C, Fortran)Vera++] Skipping execution of recorder since overall result is 'FAILURE' [Valgrind] Files to copy: [Valgrind] Analysing valgrind results [Valgrind] Ending the valgrind analysis. INFO: Processing BoostTest-1.x (default) INFO: [BoostTest-1.x (default)] - No test report file(s) were found with the pattern 'build/boosttest/*.xml' relative to '/Users/jenkins/workspace/SANS_Nightly/builddir/memcheck_clang/buildnode/macys' for the testing framework 'BoostTest-1.x (default)'. Did you enter a pattern relative to (and within) the workspace directory? Did you generate the result report(s) for 'BoostTest-1.x (default)'?" WARNING: All test reports are empty. INFO: Check 'Failed Tests' threshold. INFO: Check 'Skipped Tests' threshold. [Checks API] No suitable checks publisher found. INFO: Setting the build status to SUCCESS [PostBuildScript] - [INFO] Executing post build scripts. [PostBuildScript] - [INFO] Node does not have the role MASTER. Did not execute build step #0. [PostBuildScript] - [INFO] Node does not have the role MASTER. Did not execute build step #1. [WS-CLEANUP] Deleting project workspace... [WS-CLEANUP] Deferred wipeout is used... [WS-CLEANUP] done Finished: FAILURE