Changes

#1510 (May 9, 2022, 12:52:53 AM)

  1. fixed typo in function call. switched default to using new regularized turb closure — shunz / detail
  2. switched back to using 2D turb H*1 closure — shunz / detail
  3. Remove trailing white space — jta29 / detail
  4. Removed trailing white space — jta29 / detail
  5. added output of closure model derivatives for IBL3 flux system eigen-analysis — shunz / detail
  6. fixed line-length squawk — allmaras / detail
  7. Minor cleanup — galbramc / detail
  8. Fix instantiations — galbramc / detail
  9. made PyDict required parameter in ctor; moved discretization/stabilization parameter — allmaras / detail
  10. made SolutionData* unit tests consistent with ctors — allmaras / detail
  11. made sandbox codes consistent with changes to SolutionData*: (a) PyDict parameter — allmaras / detail
  12. removed new unit test (committed too soon) — allmaras / detail
  13. fixed unused variable squawk — allmaras / detail
  14. moved stabilization parameter next to PDE consistent with SolutionData* — allmaras / detail
  15. move stab parameter in SolutionData call — allmaras / detail
  16. made system tests consistent with SolutionData* — allmaras / detail
  17. removed duplicate look-up filename definitions — allmaras / detail
  18. added required PyDict() argument to SolutionData* — allmaras / detail
  19. removed CG two-phase test case (will bring it back later) — allmaras / detail
  20. making file name conventions consistent: "Galerkin_Stablized" is anything involving — allmaras / detail
  21. line length squawk — allmaras / detail
  22. Nightly fixes — galbramc / detail
  23. fixed some "_Stabilized" typos; removed unused includes from VMSD toys — allmaras / detail
  24. fixed "_Stabilized" typos — allmaras / detail
  25. fixed constructor bug for var args; now all ctors are consistent in "BCArgs&&... args" — allmaras / detail
  26. Fix SANS_Commit script — galbramc / detail
  27. Fix warning — galbramc / detail
  28. Correct Brenner AV in 2D and add 3D — galbramc / detail
  29. Arrary bound fix — galbramc / detail
  30. Warning fixes and relax nightly tolerance — galbramc / detail
  31. Don't try to use solutions from diverged linear solver — galbramc / detail
  32. added second generalized-H tensor that gives M-type grid Laplacian; it is the — allmaras / detail
  33. added second path that assumes incoming H field is same as original H^2 (computed — allmaras / detail
  34. added second path that assumes incoming H field is J*J^t (computed — allmaras / detail
  35. uncommented scaleArtificialViscosity function needed for Homotopy; added unit tests — allmaras / detail
  36. fixed scalar-h code for 1D; clean-up for 2D/3D — allmaras / detail
  37. added prescribed CD(x,y) field — shunz / detail
  38. Various small cleanups — galbramc / detail
  39. added optional vertex coordinates for single triangle/tet constructors — allmaras / detail
  40. Update unit tests — galbramc / detail
  41. Missed one — galbramc / detail
  42. Added prescribed CD field for inversion of CDiss correction factor beta — shunz / detail
  43. Encapsulate regularization constants in one header — hcarson / detail
  44. style ding — hcarson / detail
  45. minor tweaks of torpedo case IBL3 setup — shunz / detail
  46. Dump out unconverged restart files — galbramc / detail
  47. Dump out unconverged restart files — galbramc / detail
  48. Added lines for extracting final qfld — hcarson / detail
  49. Add AV to SA equation in 3D — galbramc / detail
  50. Fix surreal type — galbramc / detail
  51. Fix surreal type — galbramc / detail
  52. Mucking with a correction multiplier term to the dissipation relation — shunz / detail
  53. fixed long lines — shunz / detail
  54. Update test for previous commit — galbramc / detail
  55. mucking with dissipation relation inversion — shunz / detail
  56. Use MKL_PARDISO for PETSc DirectLU solver — galbramc / detail
  57. Only use one thread for DirectLU MKL_PARDISO — galbramc / detail
  58. move the PETSc solve time print — galbramc / detail
  59. Add PETSc option to scale by diagonal — galbramc / detail
  60. Added but commented out hacks with inflow BC bump/step features — shunz / detail
  61. Added a few prescribed CD(x,y) field based on RANS data — shunz / detail
  62. fillSystemVector syncs MPI DOF. Fix Sensor symmetry BC for 3D. More parallel testing with NaN's — galbramc / detail
  63. added new beta closure — shunz / detail
  64. Fix compile errors — galbramc / detail
  65. Fix compile errors — galbramc / detail
  66. Refactor isValidState checks in parallel — galbramc / detail
  67. Compile fix — galbramc / detail
  68. One more isValidState fix — galbramc / detail
  69. Add positive preserving source for 3D. Dissabled for now. — galbramc / detail
  70. Compile fix — galbramc / detail
  71. Add some asserts to 'Node Rank' for xfld tecplot dump — galbramc / detail
  72. adding curvilinear transformation functionality — ursachi / detail
  73. missed some files — ursachi / detail
  74. Also dump out xfld spirit — galbramc / detail
  75. Add set_dot and continuously relax sewFace tolerances for CamberBlade LE and TE surfaces. — galbramc / detail
  76. Format fix — galbramc / detail
  77. Fix the last fix — galbramc / detail
  78. Actually fix the fix of the last fix for the previous fix — galbramc / detail
  79. Add UpdateFraction to Galerkin Stabilized — galbramc / detail
  80. Added macro to toggle the use of prescribed CD(x,y) field — shunz / detail
  81. Allow MaxChangeFraction to work with SteveLogic — galbramc / detail
  82. Skip zombie DOF for UpdateFraction check — galbramc / detail
  83. fixed outdated class template argument — shunz / detail
  84. More fixes to allow UpdateFraction with SteveLogic — galbramc / detail
  85. Don't mix units — galbramc / detail
  86. fixed more outdated class template argument — shunz / detail
  87. Fix unit tests — galbramc / detail
  88. EmbeddedCGField fixes — galbramc / detail
  89. Fix one more missing EmbeddedCGField — galbramc / detail
  90. Updated Bernstein bases for use in CG fields. We dont have Hessians implemented, so stabilized CG needed a change to only calculate Hessians if we have stabilization turned off. To go above p3 in 3D CG, we need to change the basis functions to be match our implied ordering. Since Bernstein polynomials are modal and not hierarchical, we need to solve a linear system to do projections between orders. — blsc / detail
  91. Fixed unit tests.  Turned off the correction when ctau surpasses ctau_Tinit in 3D IBL_foureqn — shunz / detail
  92. Added 4D Bernstein bases (linear) on pentatope, with CG and DG fields — blsc / detail
  93. updated pyrite files for IBL3 four eqn laminar — shunz / detail
  94. fixed undefined references — shunz / detail
  95. git was not happy about the commit message...trying to fix it here..this commit is about adding definition of static class members in cpp file — shunz / detail
  96. added transformation function to ghost boundaries — ursachi / detail
  97. added test case — ursachi / detail
  98. cleaned up test case — ursachi / detail
  99. Adding adapt case with P1 corner singularity divergence weirdness. P2 and 3 are fine, but P1 error blows up 4 orders of magnitude.... — hcarson / detail
  100. Update tolerances on L2 project tests for Bernstein bases. Fix NaN issue with auxiliary problem for Homotopy. — blsc / detail
  101. Update tolerances for intel — blsc / detail
  102. Add Lagrange Node tecplot dump for CG fields — galbramc / detail
  103. Fix last commit — galbramc / detail
  104. added PyDict parameter (StatusOKatMaxIterations) to change status when solver hits — allmaras / detail
  105. Updated tecplot CG dump — galbramc / detail
  106. Compile fix — galbramc / detail
  107. added annotation — shunz / detail
  108. Allow zero bodies in a model — galbramc / detail
  109. Add Cylindrical system for Coles profile — galbramc / detail
  110. Maybe compile fixes — galbramc / detail
  111. Fix CG tecplot dump — galbramc / detail
  112. Default coordinate system for Coles profile — galbramc / detail
  113. intermediate commit in case of ACDL power down. sandbox still should not compile yet — shunz / detail
  114. 1st try at 3D NS/RANS no-slip isothermal/adiabatic BCs via Robin sans-Lagrange — allmaras / detail
  115. added -DUSE_GRID_LAPLACIAN to makefiles in all directories containing files where the #ifdef is used — allmaras / detail
  116. make FieldWeighted consistent with BasisWeighted (mostly involved adding param to PDE calls) — allmaras / detail
  117. replaced hard-coded false to PDE check for including viscous terms in boundary flux — allmaras / detail
  118. instantiations needed for uniform source in sensor PDE for artificial viscosity — allmaras / detail
  119. added #pragma message to all *.h files that use USE_GRID_LAPLACIAN; this will — allmaras / detail
  120. removed explicit #define/#undef USE_GRID_LAPLACIAN from unit tests that use this — allmaras / detail
  121. added Tq & Tg template parameters for sourceTrace — allmaras / detail
  122. added p_ref() function to density model to provide a means of accessing reference — allmaras / detail
  123. changed SANS_ASSERT to SANS_ASSERT_MSG to output message on error — allmaras / detail
  124. fixed typo: D1 -> D2 — allmaras / detail
  125. added PyDict option to specify Dirichlet data for Robin BC for AV; useful for — allmaras / detail
  126. added FieldWeighted unit test for sans-Lagrange Dirichlet BCs for Euler — allmaras / detail
  127. added test for jacobian/metric of an equilateral triangle — allmaras / detail
  128. exact data explicitly provided, rather than determined by do-loop dot product accumulation — allmaras / detail
  129. added unit grid where coordinates of all 4 corners can be input; facilitates making — allmaras / detail
  130. typo fix in unit test — allmaras / detail
  131. Enabled move construction and assignment. — hcarson / detail
  132. Added ability to output a temporary field containing the fully reconstructed p' adjoint — hcarson / detail
  133. Added some more move constructors. — hcarson / detail
  134. turn off clang warnings for '#pragma message' — allmaras / detail
  135. It's not a pointer you idiot. — hcarson / detail
  136. fixed quad order bug and added assert that all quad orders are the same — ursachi / detail
  137. More tecplot dump fixes — galbramc / detail
  138. fixed typo in unit test — allmaras / detail
  139. vera: lines too long — allmaras / detail
  140. Compile fix — galbramc / detail
  141. fixed quadrature bug elsewhere and fixed warnings — ursachi / detail
  142. replace several repeats of explicit pow(*, 2) coding with call to private function — allmaras / detail
  143. new MatrixS matmul instantiations needed for sans-Lagrange Robin BCs of no-slip isothermal NS/RANS 3D — allmaras / detail
  144. fix to test file to actually call the write method — hcarson / detail
  145. added Robin_sansLG to VMSD and VMSD-BR2 — allmaras / detail
  146. Hopefully finally got the link problems fixed — galbramc / detail
  147. Enabled move construction and assignment. — hcarson / detail
  148. Added some more move constructors. — hcarson / detail
  149. Added ability to output a temporary field containing the fully reconstructed p' adjoint — hcarson / detail
  150. refactored 3D box hex grid to allow for arbitrary list of node coordinates — shunz / detail
  151. added DOF count checks in box hex grid — shunz / detail
  152. more #include's for Robin_sansLG BCs — allmaras / detail
  153. added curvilinear transformation and unit tests — ursachi / detail
  154. added missing includes (for std::shared_ptr) — ursachi / detail
  155. added another missing include for std::shared_ptr — ursachi / detail
  156. hopefully final include for shared_ptr — ursachi / detail
  157. fixed cmakefiles — ursachi / detail
  158. added CG field instantiation for IBL3 Qauxv field — shunz / detail
  159. minor annotation — shunz / detail
  160. refactoring to show intention more clearly — shunz / detail
  161. made some fixes for failing tests — ursachi / detail
  162. added/deleted #include's for IntegrandBoundaryTraces; added Robin_sansLG where needed, — allmaras / detail
  163. new MatrixS matmul instantiations needed for Robin_sansLG BCs — allmaras / detail
  164. Trying to fix vera errors — jta29 / detail
  165. fixed spacetime exception — ursachi / detail
  166. minor cleanup — shunz / detail
  167. Add missing USE_GRID_LAPACIAN. Minor PDERANSSA formatting fixes. Fix for Coles RANSSA. — galbramc / detail
  168. Add instantiation — galbramc / detail
  169. Use H instead of H^2 in Robin BCs for AV when USE_GRID_LAPLACIAN is defined. — savithru / detail
  170. Update BCRANSSA3D — galbramc / detail
  171. Fixed missing method for dumping the perturbation field. In the process added many additional move constructors/assignments. Also added an implicit conversion for ElementPair, allowing it to be inserted directly into map/unordered map/set etc. A bunch of small house cleaning tasks too. Deleted explicit constructors that could just be default. — hcarson / detail
  172. quadOrder check shouldn't be done if using TopoD1 — ursachi / detail
  173. Fixing errors — jta29 / detail
  174. updated unit tests for curvilinear transformation — ursachi / detail
  175. accidentally deleted default constructor — hcarson / detail
  176. EVEN MORE MOVE CONSTRUCTORS — hcarson / detail
  177. cleaning up of failing unit tests (mainly changing some — ursachi / detail
  178. forgot to delete something — ursachi / detail
  179. removed unnecessary tecplot dumps — ursachi / detail
  180. another attempt to make jenkins stop complaining, now explicitly — ursachi / detail
  181. UniqueTrace a mutable struct. Immutability doesn't buy anything, and just prevents compiler optimization. Additionally, deleted a large number of unneeded constructors, as the compiler provided versions are better and safer. If you write no code, you can write no bugs! See CPP guidelines rule of zero — hcarson / detail
  182. fixed warning — ursachi / detail
  183. deleted unnecessary stuff and cleaned up some additional warnings — ursachi / detail
  184. adding back the default constructor, something funky happens with default initializer. Also change MatrixS to use stdarray, and then to have the 5 constructors as defaults. — hcarson / detail
  185. Fix RANS BC with Conservative variables. More RANSBC unit tests. Add smoothmin linearization. First attempt at blade optimization. — galbramc / detail
  186. Forgot file — galbramc / detail
  187. Add missing include — galbramc / detail
  188. Missed a file — galbramc / detail
  189. Compile error fixes — galbramc / detail
  190. Missed one — galbramc / detail
  191. added checkInputs calls when setting up transformation function — ursachi / detail
  192. fixed memory issue when assigning qfld DOFs — ursachi / detail
  193. minor addition of annotation — shunz / detail
  194. deleted more unnecessary functions — ursachi / detail
  195. Add EGADS ruled wrapper — galbramc / detail
  196. Fix NormalField linearization. — galbramc / detail
  197. Forgot some files — galbramc / detail
  198. Add vectorization — galbramc / detail
  199. Fix Surreal changes — galbramc / detail
  200. bounding box should search along traces when using transformation even — ursachi / detail
  201. added 3D entropy variables for Euler/NS — allmaras / detail
  202. Fix compile error — galbramc / detail
  203. Fix ruled interface — galbramc / detail
  204. Fix warning — galbramc / detail
  205. Use PTC solve before constrained solve with blade optimization — galbramc / detail
  206. Fix warning — galbramc / detail
  207. Fix uninitialized data. Dissable normal field sensitivity for now. — galbramc / detail
  208. Add missing instantiation — galbramc / detail
  209. Fix BodyForce requiring pProp specified — galbramc / detail
  210. flipped output_stream flag to true (thought this was down with last commit, but not) — allmaras / detail
  211. unit tests for Robin_sansLG BCs for 3D NS — allmaras / detail
  212. Restore DeveloperEmailAddresses — galbramc / detail
  213. lowered tolerance for test — ursachi / detail
  214. Updated nu-max calculation when USE_GRID_LAPLACIAN is defined. Added a default argument to AVSensor_Source2D_TwoPhase to model a constant source term if needed. — savithru / detail
  215. cleaned up and fixed sandbox case on FP for S-shaped duct — shunz / detail
  216. commented out hacks — shunz / detail
  217. Starting to implement BCDataFields by copying over stuff — shunz / detail
  218. added and experimented with BCDataFieldManager class.  Ready to further extend this for BCDataField implementation. — shunz / detail
  219. minor commenting — shunz / detail
  220. minor refactoring before adding BC data field stuff — shunz / detail
  221. Initial prototype of introducing BC data fields into algebraic equation set and instantiations of IntegrandBoundaryTraces — shunz / detail
  222. trying to equip IntegrandBoundaryTrace with BCDataField: succeed in contructor but failed due to preset Integrand type defi in IntegrateBoundaryTrace_Dispatch.dispatch()....now turning off all the hacks, which will be removed in the future — shunz / detail
  223. some tidying up — shunz / detail
  224. hide away to-be-removed stuff/hacks — shunz / detail
  225. Refactored 3D full potential stuff, particularly adding wall transpiration BC.  Start to pave ways for including BC data field in BC class — shunz / detail
  226. Avoid failed solves when optimizing body force blades — galbramc / detail
  227. Fix for last commit — galbramc / detail
  228. Vera fixes — galbramc / detail
  229. Tried wall transpiration in S-duct FP case — shunz / detail
  230. append BC data field to 3D FP wall transpiration BC — shunz / detail
  231. renaming variables for clarity — shunz / detail
  232. Enabled using BC data field by passing it to the BC class.  Tested on full potential 3D case.  Removed previous attempt of trying to let integrand class to own BC data field — shunz / detail
  233. removed code from a previous attempt to implement BC data field — shunz / detail
  234. Change objective return on solve failure for BodyForce optimization — galbramc / detail
  235. refactored BC data evaluation call from element — shunz / detail
  236. Started working on Auxv projection equation for IBL+FP coupling: finished the qauxv component in the projection integrand — shunz / detail
  237. minor refactoring to reduce unnecessary memory allocation — shunz / detail
  238. modulize velocity calculation in 3D FP solver — shunz / detail
  239. removed const reference for interior trace groups member data and made it a copy; — allmaras / detail
  240. added option to return success flag if max number of iterations are reached without converging; — allmaras / detail
  241. added interface for derivedSurfaceQuantity with parameter — allmaras / detail
  242. typo fixes — shunz / detail
  243. Added new 4-variable Qauxv formulation and associated Field instantiations — shunz / detail
  244. Initial work on Auxv equation with 3D FP solver: compiles now but needs to be completed — shunz / detail
  245. Some cleanup on Auxv equation (with 3D FP) residual — shunz / detail
  246. some more cleanup before completing Auxv equation jacobian — shunz / detail
  247. Auxv equation now works for a trivial test case.  Now need to work out volume-surface grid connectivity — shunz / detail
  248. minor cleanup — shunz / detail
  249. minor refactoring/annotation — shunz / detail
  250. Initial work on contructing surface mesh corresponding to a boundary group of volume mesh (BoxHex). TBD: Needs nontrivial testing and interior trace groups — shunz / detail
  251. tweaks — hcarson / detail
  252. Added nontrivial test for Auxv projection from FP solution — shunz / detail
  253. minor typo fix in comments — shunz / detail
  254. Added interior trace elements to the boundary surface mesh of BoxHex.  Tried/verfified solving IBL3 on this surface mesh in the flat plate laminar BL case — shunz / detail
  255. minor cleanup — shunz / detail
  256. Update for CentOS 7 — galbramc / detail
  257. minor cleanup/refactoring — shunz / detail
  258. Upgrade AFLR — galbramc / detail
  259. Fix unit test — galbramc / detail
  260. Add a stack parameter to CamberBlade — galbramc / detail
  261. Add option to constrain Mach number with BodyForces — galbramc / detail
  262. Fixes for specifying NormalMach as BodyForce constraint — galbramc / detail
  263. Rework Pprop output functional for BodyForces. Fix assertions for SAQCR. — galbramc / detail
  264. Unit test fixes — galbramc / detail
  265. Relax tolerance — galbramc / detail
  266. Fix bug in AFLR interface — galbramc / detail
  267. Relaxed basis function tolerances for intel — galbramc / detail
  268. Relax DG tolerances for intel — galbramc / detail
  269. Lots of warning fixes — galbramc / detail
  270. Tolerance fixes for intel compiler — galbramc / detail
  271. More warning fixes — galbramc / detail
  272. More warning fixes. Move adjoint MPI sync. — galbramc / detail
  273. Fix compile error — galbramc / detail
  274. Missed a warning — galbramc / detail
  275. Another warning fix — galbramc / detail
  276. More warning fixes — galbramc / detail
  277. Relax timeout — galbramc / detail
  278. Nightly fixes. Make TRIANGLE optional. — galbramc / detail
  279. cppcheck fixes — galbramc / detail
  280. Upgrade to ESP 1.19 (minimium required). Lots of cppcheck fixes. — galbramc / detail
  281. Warning fixes for CAPS — galbramc / detail
  282. Fixes to make triangle optional — galbramc / detail
  283. Dissable a test for now — galbramc / detail
  284. Missed a TRIANGLE suppression — galbramc / detail
  285. Relax test time — galbramc / detail
  286. One more use of TRIANGLE — galbramc / detail
  287. Relax one more test timing — galbramc / detail
  288. Update BoostBuild — galbramc / detail
  289. Add polynomial velocity profiles to Coles — galbramc / detail
  290. Some Coles profile fixes — galbramc / detail
  291. Refactor Rotor constraint — galbramc / detail
  292. Fixes for Rotor outputs — galbramc / detail
  293. Forgot a file — galbramc / detail
  294. Fix compile error — galbramc / detail
  295. Missed an output option — galbramc / detail
  296. More rotor output fixes — galbramc / detail
  297. Fix warning — galbramc / detail
  298. Allow no constraints during optimization — galbramc / detail
  299. Add back regular solve during body force optimization — galbramc / detail
  300. Relax timing — galbramc / detail
  301. Fix body force optimization for RANS — galbramc / detail
  302. More verbose error message — galbramc / detail
  303. One more body force optimization fix — galbramc / detail
  304. Update sansLIPAIM for ESP 1.19 — galbramc / detail
  305. Fix Rotort_GlobalConstraint convergence check — galbramc / detail
  306. Fix data transfer — galbramc / detail
  307. Add missing Python GIL protections — galbramc / detail
  308. Some nightly fixes. Better specification for building boost. — galbramc / detail
  309. Add Coloes polynomial pressure profile — galbramc / detail
  310. Add RANS Coles pressure profile. Relax test tolerances. Other small fixes. — galbramc / detail
  311. Remove upper bound check on Coles pressure polynomial — galbramc / detail
  312. Add ProfileDebug_eta_max — galbramc / detail
  313. Another tweak to Coles pressure profile — galbramc / detail
  314. Add polynomial pressure profile to back pressure BC — galbramc / detail
  315. Fix required delta for static back pressure — galbramc / detail
  316. VMSD-BR2 was using the wrong quadrature rule to calculate the non-zero pattern. Jacobian has been updated so that it should use correct (1 point) quadrature for non-zero pattern — blsc / detail
  317. Added logic to JacobianCell_VMSD_BR2 so that the static condensation matrices are not used for the non-zero patter calculation. Under-integration resulted in these matrices being singular. — blsc / detail
  318. Refactor BodyForceSolver — galbramc / detail
  319. Suppress Boost serialization bug for VectorS<M,SurrealS> — galbramc / detail
  320. Add missing include — galbramc / detail
  321. Test syncDOFs_MPI with more complex data types — galbramc / detail
  322. Add missing ifdef — galbramc / detail
  323. Put back distance function calculation — galbramc / detail
  324. Fix BodyForce solver initial condition — galbramc / detail
  325. Exlicitly use SANS::SurrealS with EGADS. Update NormalField test. — galbramc / detail
  326. Take away a toy — galbramc / detail
  327. Intel workaronud... — galbramc / detail
  328. Test the correct Face — galbramc / detail
  329. Fix compile error — galbramc / detail
  330. Warning fixes — galbramc / detail
  331. Finally found the NormalField bug. — galbramc / detail
  332. Fix OutGroup specification for BodyForce Solver — galbramc / detail
  333. Add Optimization option to BodyForce solver. — galbramc / detail
  334. Forgot to update checkInput function. — galbramc / detail
  335. Fix use of incorrect dictionary — galbramc / detail
  336. Fixes for boundary triangle orientation with refine — galbramc / detail
  337. Split trapped edges with refine. Check for all 0 element in distance function. Other small fixes. — galbramc / detail
  338. Forgot to update refineParam::checkInputs — galbramc / detail
  339. Updates to refine interface and print requested complexity with MOESS — galbramc / detail
  340. Use log_eucliean edge length with refine — galbramc / detail
  341. Try to fix suitesparse metis dilemma. Add more g++ and clang++ copmiler versions. — galbramc / detail
  342. gnu 11 fixes — galbramc / detail
  343. Remove -lc++ from clang flags — galbramc / detail
  344. Add missing include — galbramc / detail
  345. Upgrade ccache — galbramc / detail
  346. Fix SANSparallel MMA optimization — galbramc / detail
  347. Cleanup for last commit — galbramc / detail
  348. Removed execute permission for a .cpp file — shunz / detail
  349. Update ccache path — galbramc / detail
  350. Compile fixes for clang-10 — galbramc / detail
  351. Relax tolerance — galbramc / detail
  352. More compile fixes — galbramc / detail
  353. Warning fixes — galbramc / detail
  354. Lots of compile warnings and other fixes — galbramc / detail
  355. Use default functions in MatrixSymS. Increase execution times for coverage. Warning fixes. — galbramc / detail
  356. Fix typo — galbramc / detail
  357. Relax toleranes. Upgrade to AFLR 10.17.5. — galbramc / detail
  358. Use appropriate architecture for AFLR — galbramc / detail
  359. Update AFLR3 and use TRANSP_INT_BL for Body Force boundaries — galbramc / detail
  360. Fix warnings — galbramc / detail
  361. Update finding and checking AFLR — galbramc / detail
  362. Relax execution time — galbramc / detail
  363. Intel is just different... — galbramc / detail
  364. Relax more tolerances and fix indentations — galbramc / detail
  365. More intel relaxation — galbramc / detail
  366. Use system lcov and relax intel tolerance — galbramc / detail
  367. Use xHost instead of xhost so ccache works with Intel — galbramc / detail
  368. Add surface tecplot dump to BodyForce Solver — galbramc / detail
  369. Fix for body force surface outputs — galbramc / detail
  370. Added Pointwise mesh generator — galbramc / detail
  371. Parallel fix and forgot a file — galbramc / detail
  372. Fix Pointwise h calculation. Fix link errors. — galbramc / detail
  373. Small fix to Pointwise glf script — galbramc / detail
  374. Added waligura@mit.edu to DeveloperEmailAddresses — waligura / detail
  375. PDERANSSA2D changes which take out ntref as a variable in the PDERANS function and unit test. The unit test update is not ideal right now since I am still waiting on a way to calculate some terms, but there is a SANS developer exception for the time being. Needed to push it to start building off some new SA varaitions off of it. — waligura / detail
  376. Removing white spaces in PDERANSSA2D — waligura / detail
  377. Add isotropic MOESS optimization option for Pointwise — galbramc / detail
  378. Fixes to PDERANSSA2D and unit test — waligura / detail
  379. Another formatting change — waligura / detail
  380. Try again — waligura / detail
  381. messed up spacing at the end of the file — waligura / detail
  382. Valgrind python suppressions — galbramc / detail
  383. Nightly clang analyzer suppressions — galbramc / detail
  384. Correct volume calculation for Pointwise — galbramc / detail
  385. Pointwise fix for dimensionality — galbramc / detail
  386. changes to sandbox cases with nuref defined — waligura / detail
  387. Fix instantiation — galbramc / detail
  388. Clang compiler fix — galbramc / detail
  389. Relax timing for one test — galbramc / detail
  390. More changes to sandbox cases for nuref deletion update — waligura / detail
  391. Initilizing variables and raising the convergence tolerance — waligura / detail
  392. Just lowering the tolerance a little bit more on the PDERANS unit test to try and get it through Intel. I need to update this later anyway so this may be a temporary fix — waligura / detail
  393. Actually finding that closetol is defined multiple times in this unit test — waligura / detail
  394. Use Python 3.8.10 for valgrind and sanitizer — galbramc / detail
  395. Messing around with the tolerances a little bit more — waligura / detail
  396. Improved linesearch console output. Now when verbosity is on, the linesearch outputs whether a residual is increased (+), decreased (-), or converged (*) at the locations tested. — blsc / detail
  397. Updates to Newton. Neater verbose outputs to console for residual. Tracking nonlinear iterations taken correctly for cases where Newton does not converge. — blsc / detail
  398. Update PDEmitAVSensor2D and PDEmitAVSensor3D to better handle the afld, including system tests to ensure consistency. This required a few changes in the PDEEulermitAVDiffusion classes (more to changes to come with these). Also added a h/p scaling for the 2D sensor viscosity with unit test. — blsc / detail
  399. typo fixes in Pointwise tcl script — allmaras / detail
  400. Removed duplicated class definition in two cpp files, which may have led to unitialized data error reported by valgrind. — shunz / detail
  401. Fix nightly script — galbramc / detail
  402. Another nightly script fix — galbramc / detail
  403. Updates to Euler/NS mainly to improve the custom tecplot output. Updates to artificial diffusion classes to remove the a-field from params, since those should all be handled by the PDESensor classes now. Updates to the custom tecplot output function for RANSSA so we get the SA variable in the domain, and RANSSA fluxes at the boundary. Added PDEEulermitAVDiffusion3D.h to the exclusion list for file size. Updates to boundary conditions mostly to handle the a-field in the params in a cleaner way. — blsc / detail
  404. Renamed analytic functions with array output to hopefully avoid confusion — shunz / detail
  405. Updated PDESourceOnly and unit tests. Required some modification of a few PDEs in the process. — blsc / detail
  406. Updated homotopy continuation algorithm. This involves an update to the constructor, so the relevent sandbox cases have been updated. A few sandbox cases and unit test have been disabled. The unit test will be re-enabled once it has been updated to the new interface (the content is currently lacking anyway). Also added a function to SolverInterface_VMSD_BR2 to return the total (q + qp) fine (p+1 without subtraction) adjoint for output to Tecplot. — blsc / detail
  407. Minor edits — shunz / detail
  408. Add ProjectToQauxi equation class for coupling FP+IBL3 — shunz / detail
  409. Rename VectorFunction3D to ArrayFunction based on new naming convention — shunz / detail
  410. Removed all the cases that were disabled in the sandbox. Re-added the homotopy unit tests (still need more work, but to check basic functionality). Updated advection-diffusion and PDEHomotopy interfaces to support the new unit test. — blsc / detail
  411. Add initial framework for Auxi equation for FP-IBL3 coupling — shunz / detail
  412. Minor cleanup — shunz / detail
  413. Removing some secluded ntref values pointed out by Ben — waligura / detail
  414. add anonymous namespace for safety — shunz / detail
  415. Included all the necessary fields int Auxi equation for FP-IBL3 — shunz / detail
  416. Renamed integrand for projection to Qauxi — shunz / detail
  417. Added the ability to specify parameters for positivity preserving source in Euler. Updated tests to reflect change in constructor. — blsc / detail
  418. I think this will fix the error Jenkins bought up for the Euler with rotor PDE. — blsc / detail
  419. Fix Euler with rotor PDE boundary condition — blsc / detail
  420. Fix Euler with rotor PDE boundary condition -- Surreals could be passed through the PointSequence too. — blsc / detail
  421. Removed unused header from Homotopy.h — blsc / detail
  422. Warning fixes — blsc / detail
  423. More warning fixes for missing override keyword. — blsc / detail
  424. Update to latest avro — galbramc / detail
  425. avro parallel fixes — galbramc / detail
  426. Dissable avro graphics — galbramc / detail
  427. add const qualifier just to be extra cautious — shunz / detail
  428. Initial working prototype of projection to Qauxi without the div.(M) term — shunz / detail
  429. Distinguish volume and manifold quadrature order configurations — shunz / detail
  430. Rename integrand class for clarity — shunz / detail
  431. 4D fixes, and rename Ptope to Pentatope — galbramc / detail
  432. Missed a file — galbramc / detail
  433. Remove file dump — galbramc / detail
  434. Fix warning — galbramc / detail
  435. Add initial API of manifold integrands for Auxi equation — shunz / detail
  436. Put avro WriteConformity back, but does nothing for now — galbramc / detail
  437. add more details to integrand of manifold boundary trace for FP-IBL3 coupling — shunz / detail
  438. More avro parameter fixes — galbramc / detail
  439. Reduce Pentatope mesh size. Fix accidental commit — galbramc / detail
  440. Warning fix — galbramc / detail
  441. rename files/classes for clarity — shunz / detail
  442. add missing include — shunz / detail
  443. [intermediate progress] compiling prototype of manifold boundary trace integrals in auxi equation for FP-IBL3 coupling — shunz / detail
  444. minor edit — shunz / detail
  445. Removed unnecessary destructor — shunz / detail
  446. typo fix — shunz / detail
  447. Access cell group via global indexing instead of local — shunz / detail
  448. Initial working prototype of new Field for Qauxi for FP-IBL3 so that DOFs can be viewed as volume boundary trace and area cell at the same time — shunz / detail
  449. Type-related bugfix in FP PDE — shunz / detail
  450. cleaned up unused method — shunz / detail
  451. Updated VMSDBR2 statically condensed Jacobian calculating to accept multiple RHS to condense using a single Jacobian calculation. Updated linear solvers for globally constrained systems to use this new functionality. Added unit tests to test that results from multiple-RHS code matches applying the single-RHS code to each RHS individually. This update will only affect globally constrained systems (using VMSDBR2). — blsc / detail
  452. Hard coded manifold/surface quad grid that matches z-min boundary group of a box hex grid — shunz / detail
  453. Added comments to BC data field implementation — shunz / detail
  454. Minor typo fix — shunz / detail
  455. Refactored DOF indexing contruction to ensure consistency between volumeb boundary trace field and area cell field — shunz / detail
  456. Rename variable for clarity.  Add exception to guard against misuse of BC data in full potential wall transpiration BC — shunz / detail
  457. Start a new case of FP-IBL3 coupling by copying from existing FP-only case. — shunz / detail
  458. Fixed clang warnings. Fixed abstract class error due to not implementing static condensation update to MKL. Have added a developer exception so the execution path exists, but extension still not implemented for MKL. — blsc / detail
  459. Refactored AES Project to Qauxi for flat plate 3D panel so that it's ready to be generalized for 3D FP coupling as well — shunz / detail
  460. Removed a deprecated header file — shunz / detail
  461. Add partial specialization to support block 4x4 FP+IBL3 coupling — shunz / detail
  462. Fixed missing BC parameter checks — shunz / detail
  463. Fixed long line formatting — shunz / detail
  464. Fixed more intel warnings. Added unit tests for the multi-RHS logic for UMFPack and MKL. The MKL test ensures that a developer excpetion occurs, since the logic for MKL has not been implemented. Moved the sum-constrained algebraic equation set in to its own file (like the Advection and Heat equation sets). — blsc / detail
  465. minor cleanup — shunz / detail
  466. Add static data member to identify the size of jacobian (i.e. number of equations and variables) — shunz / detail
  467. Add unit test for block 4x4 system of FP-IBL3 coupling. Still a working progress, but test compiles and runs — shunz / detail
  468. Fixed more intel warnings. Added unit tests for the multi-RHS logic for FMGRES. The FGMRES test ensures that a developer excpetion occurs, since the logic for MKL has not been implemented. — blsc / detail
  469. Completed Auxi equation for FP-IBL3 coupling — shunz / detail
  470. Fix a bug in block 3x3 and 4x4 system of equations: MatrixSize().  It has been identified because perviously block (2,1) is decoupled/zero for previous test cases — shunz / detail
  471. Refactor jacobian ping test screen output for clarity — shunz / detail
  472. Refactor JacobianParam to allow for multiple parameters of different dimension, e.g. for Auxi equation of FP-IBL3 coupling — shunz / detail
  473. Pass block 4x4 block algebraic equation set unit test without coupling for FP and Auxv equations — shunz / detail
  474. add const qualifiers — shunz / detail
  475. Add annotation to AES_Auxi — shunz / detail
  476. Remove redundant class template arguments — shunz / detail
  477. Remove AGLS. Add blockage and viscous terms to RotorSource. — galbramc / detail
  478. Missed a file — galbramc / detail
  479. Refator AES_auxv mass matrix jacobian computation for clarity and simplicity — shunz / detail
  480. BC fixes — galbramc / detail
  481. Fix include — galbramc / detail
  482. More boundary condition cleanup — galbramc / detail
  483. Relax tolerance — galbramc / detail
  484. Warning fix — galbramc / detail
  485. Auxi parameter jacobian is now compiling. — shunz / detail
  486. Rename class and file — shunz / detail
  487. Added functionality to project from a DG to a CG field defined on the same x-field. — blsc / detail
  488. Remove infinite x-dervative for thickenss. Fix warnings. — galbramc / detail
  489. DG ot CG prjection now uses explicit instantiation. — blsc / detail
  490. Simplify jacobian calculation of Auxi equation as it's simply mass matrix for Galerkin projection — shunz / detail
  491. Add a specialized IntegrateCellGroups method for reuse in FP-IBL3 coupling implementation — shunz / detail
  492. More strict templates for AV. Add strongFluxViscous to AV. — galbramc / detail
  493. modified (solution error)^2 to use dot product; now allows general ArrayQ<T> solution — allmaras / detail
  494. Warning fixes — galbramc / detail
  495. Fix for older cmake versions — galbramc / detail
  496. Replace max with smoothRamp_tanh2 for artificial viscosity — galbramc / detail
  497. Some more tests — galbramc / detail
  498. Fix smoothRamp_tanh2. Fix ThicknessNACA6 to use fabs instead of abs. — galbramc / detail
  499. Suppress compiler warning — galbramc / detail
  500. Fix warning and relax tolerance — galbramc / detail
  501. Enable viscous body forces for Euler — galbramc / detail
  502. Completed Auxv_Qinv jacobian — shunz / detail
  503. Added a test to check that bubble modes were not present in VMSD after static condenstaion for a partial Newton step. — blsc / detail
  504. Vera exclusion needed for new unit test (L006). — blsc / detail
  505. Added parallel test for homotopy, found bug in parallel, fixed bug in parallel. — blsc / detail
  506. Discrete blockage gradient — galbramc / detail
  507. Forgot a file — galbramc / detail
  508. Added an example homotopy adapt in 3D with RANS, and some missing function calls. — blsc / detail
  509. Vera fix — galbramc / detail
  510. Fix compile error — galbramc / detail
  511. Added HiFW Joukowski case using homotopy (still WIP). Updates to artificial viscosity interface to resolve some template mis-matches during Joukowski case set up. — blsc / detail
  512. Add annotations — shunz / detail
  513. Another compile fix — galbramc / detail
  514. Another compile fix — galbramc / detail
  515. Fixed error in PETSc Dicts. — blsc / detail
  516. Relax tolerance. Add PETScInit. Suppress warning. — galbramc / detail
  517. More warning fixes — galbramc / detail
  518. PDERANS3D fixes — galbramc / detail
  519. Fixes for AVSensor_Source_VMSD_SPD — galbramc / detail
  520. Fix ping test — galbramc / detail
  521. Change git update alias — galbramc / detail
  522. Fix sensitvity calculation — galbramc / detail
  523. Don't require name for camber free parameters — galbramc / detail
  524. Implement BCNone for VMSD BR2. I hope nobody has been using it... — galbramc / detail
  525. Completed d(FP)/d(Qauxi) coupling jacobian for FP-IBL — shunz / detail
  526. Forgot to commit unit test on d(FP)/d(Qauxi) jacobian — shunz / detail
  527. Removed redundant files for discarded Auxi and Auxv equation implementation — shunz / detail
  528. Removed more discarded implementation for Auxi (in FP-IBL3) — shunz / detail
  529. Add linear algebra instantiations for FP-IBL3 — shunz / detail
  530. Refactoring to keep up with JacobianParam's updated template arguments — shunz / detail
  531. Fixed formatting — shunz / detail
  532. Minor refactoring — shunz / detail
  533. Add unit test for box grid and its derived boundary manifold grid — shunz / detail
  534. Minor cleanup — shunz / detail
  535. Add more unit test — shunz / detail
  536. Add unit test for FieldVolume_DG_BoundaryTrace_matchAreaCell — shunz / detail
  537. Bug fix: previously, allocated memory for dynamic matrix but didn't initialize to zero — shunz / detail
  538. Completed 4x4 block system jacobian ping test for FP-IBL3 coupling — shunz / detail
  539. Added Tt output for Rotor — galbramc / detail
  540. added instantiations for Newton solution of FP-IBL3 equations — shunz / detail
  541. Solved first FP-IBL3 case with Newton solver — shunz / detail
  542. added instantiations for MKL and PETSc for FP-IBL3 — shunz / detail
  543. added implementation for PETSc for FP-IBL3 — shunz / detail
  544. modularized S-shaped duct grid points generation — shunz / detail
  545. debugging (for sporadically slow FP residual/jacobian) and refactoring FP-IBL3 test case — shunz / detail
  546. mod: VectorFunction -> ArrayFunction — allmaras / detail
  547. inviscid Joukowski with interface to Pointwise — allmaras / detail
  548. Added more profiling info for debugging FP-IBL3 — shunz / detail
  549. added verbose printout for debugging — shunz / detail
  550. fixed formatting errors — shunz / detail
  551. Fix Tt rotor output — galbramc / detail
  552. fixed lines that were too long — allmaras / detail
  553. fixed promote_Surreal bug (only showed up for USE_GRID_LAPLACIAN) — allmaras / detail
  554. Vector -> Array fix to be consistent with new Array*Function nomenclature — allmaras / detail
  555. added Array2Function2D class (2-component, each an analytic function) with unit test; — allmaras / detail
  556. added PyDict options for xz and yz angle offsets for 3D corner singularity — allmaras / detail
  557. Fixes for running Joukowski with avro and refine — galbramc / detail
  558. Fixes for triangle — galbramc / detail
  559. Fix for triangle with holes — galbramc / detail
  560. some cleanup on full potential PDE — shunz / detail
  561. refactored and added to residualDecreaseStatus(.) — shunz / detail
  562. fixed over-array-bound access — shunz / detail
  563. switched assertions from runtime to compile time — shunz / detail
  564. refactored FP-IBL3 S-duct test case — shunz / detail
  565. forgot to commit this... refactored linear solution checker — shunz / detail
  566. removed redundant partial specialization in AES_PTC — shunz / detail
  567. annotated PTC implementation of paramfld_ and paramfldpast_ — shunz / detail
  568. beautified Newton iteration printout — shunz / detail
  569. refactored an MatrixS constructor — shunz / detail
  570. added comments — shunz / detail
  571. enabled PTC for FP-IBL3 4x4 coupling — shunz / detail
  572. fixed FP and IBL side wall BC — shunz / detail
  573. refactored std::vector access to use bound checking — shunz / detail
  574. added comments on how/why CFL changes in PTC iterations — shunz / detail
  575. refactored PTC printout & dump — shunz / detail
  576. minor tweak to test case — shunz / detail
  577. Refactored S-duct box grid — shunz / detail
  578. Cleaned up 3D FP BC — shunz / detail
  579. some cleanup — shunz / detail
  580. added commented out code for timing — shunz / detail
  581. fixed warnings — shunz / detail
  582. added sanity check.  some cleanup — shunz / detail
  583. changed IBL3 surface normal orientation convention to be compatible with FP-IBL3 coupling — shunz / detail
  584. Refactored projection onto Qauxv to be only in-surface velocity components in FP-IBL3 coupling — shunz / detail
  585. added assertion to guard against misuse — shunz / detail
  586. Consolidated auxi equation implementation for 3D full potential and panel — shunz / detail
  587. minor cleanup — shunz / detail
  588. Merged ProjectToQauxi3D implementation for panel and FP coupling with IBL3 — shunz / detail
  589. more cleanup on include — shunz / detail
  590. Cleaned up and merged interior trace integrand for IBL3 and Auxi.  Renamed files — shunz / detail
  591. added missing include that was accidentally removed — shunz / detail
  592. cleaned up include related to 2D/3D manifold cell integrands — shunz / detail
  593. more cleanup of include — shunz / detail
  594. Cleaned up panel+IBL3 case — shunz / detail
  595. added option in IBL3 to choose how nrm_surf orientation relates to e1 and e2 — shunz / detail
  596. minor test case cleanup/tweaks — shunz / detail
  597. turned off (1) LF flux, (2) mass correction to flux and (3) amp+lag equations for IBL3 — shunz / detail
  598. fixed style — shunz / detail
  599. refactored param tuple type for better consistency between indexing, ParamTuple and FieldTuple — shunz / detail
  600. renamed parameter field type — shunz / detail
  601. refactored parameter type for IBL3 — shunz / detail
  602. refactored JacobianParam class since the previous implementation is quite limiting — shunz / detail
  603. updated JacobianParam usage in test cases following its refactoring — shunz / detail
  604. more cleanup on JacobianParam usage — shunz / detail
  605. updated use cases involving Auxi equation in panel+IBL3. deleted sandbox cases that are not worth maintaining — shunz / detail
  606. updated use cases of new PDEIBL3FourEqn API — shunz / detail
  607. fixed full potential unit tests — shunz / detail
  608. fixed a bug/typo: flipped divM and divM_rhoe flux calculation for Auxi. Fortunately, the effect on current test cases is minimal since they are incompressible flows — shunz / detail
  609. fixed IBL unit tests — shunz / detail
  610. minor cleanup of 3D IBL PDE and associated block jacobian ping test — shunz / detail
  611. Removed the dedicated (yet redundant) boundary trace integrand for 3D auxi; instead, use 3D manifold BCNone integrand.  Renamed 2D/3D BCNone integrands to reflect its general purpose, not limited to IBL PDE — shunz / detail
  612. refactored/fixed Surreal type definitions to use proper/general size variable — shunz / detail
  613. accidentally forgot these pieces two commits earlier, when updating auxi BCNone integrand — shunz / detail
  614. fixed some compile errors for auxi equation and boundary integrand — shunz / detail
  615. minor integrand cleanup — shunz / detail
  616. refactored auxi equation's cell integrand to be PhysDim-agnostic, in prep for generalization of auxi aes class — shunz / detail
  617. Renamed auxi aes class to be not 3D specific, in prep for generalization — shunz / detail
  618. Refactored BCNone integrand for Galerkin manifold to be agnostic of PhysDim — shunz / detail
  619. fixed/refactored a few Galerkin_manifold boundary integands to be agnostic of PhysDim — shunz / detail
  620. Use isotropic implied metric for IsotropicOpt MOESS — galbramc / detail
  621. refactored Galerkin_manifold interior trace integrands to be agnostic of PhysDim — shunz / detail
  622. removed daisy chain in JacobianParam since it could be handled by the primary algebraic equation class's jacobianParam(...) — shunz / detail
  623. removed 3D-specific assertion — shunz / detail
  624. refactored usage of jacobianParam(...) to account for any daisy chain in the primary algebraic equation set — shunz / detail
  625. Refactored daisy-chain/linked list implementation of algebraic equation sets, including auxi equation and proper chained calls to jacobianParam() — shunz / detail
  626. removed redundant daisy-chained calls to setSolutionField() and fillSystemVector() in algebraic equation sets.  Clarified the intended use case of daisy-chained equation set — shunz / detail
  627. Refactored 2D auxi PDE class to prepare panel-IBL2 to use the PhysDim-agnostic auxi equation implementation.  Removed redundant auxi equation set and integrand classes that used to be specialized for Panel2D — shunz / detail
  628. Removed 3D-specific assertion in auxi cell integrand. Fixed IBL2 captured transition system test case — shunz / detail
  629. Cleaned up auxi equation implementation to remove redundant dummy members in FunctionEval class.  Renamed some files & classes — shunz / detail
  630. cannot assign a regular/raw pointer to std::shared_ptr — shunz / detail
  631. Cleaned up 2D auxv equation implementation for XfoilPanel+IBL to remove redundant dummy members in FunctionEval class.  Renamed some files & classes — shunz / detail
  632. cannot assign regular/raw pointer to std::shared_ptr — shunz / detail
  633. Cleaned up 3D auxv equation implementation for flat plate panel+IBL3 to remove redundant dummy members in FunctionEval class — shunz / detail
  634. minor refactoring of XfoilPanel field discretization order checks/assertions — shunz / detail
  635. refactoring (similar to previous ones) to have PDEIBL2D define its parameter field tuple types — shunz / detail
  636. typo fix — shunz / detail
  637. only prints in verbose mode — shunz / detail
  638. fixed system/CodeConsistency tests for IBL — shunz / detail
  639. cleanup and fixes to keep IBL-related implementation up to date — shunz / detail
  640. more cleanup on DG/HDG discretization unit tests, mostly related to IBL — shunz / detail
  641. cleanup & fixes to panel-IBL3 3x3 block discretization unit tests to keep up to date with IBL-related implementation — shunz / detail
  642. removed redundant include — shunz / detail
  643. fixed miscellaneous XfoilPanel+IBL2 aes unit tests to stay up to date with latest IBL implementation — shunz / detail
  644. cleaned up & fixed sandbox cases for XfoilPanel+IBL2D single run and drag polar for airfoil — shunz / detail
  645. miscellanenous fixes of compile error and formatting style — shunz / detail
  646. removed uses of gradqn and q in Neumann and Dirichlet BCs respectively for potential flow — shunz / detail
  647. fixed some compile errors and formatting style — shunz / detail
  648. updated pyrite check files for IBLFourEqn3D to use LF flux without mass correction — shunz / detail
  649. fixed miscellaneous unit tests related to coupled IBL — shunz / detail
  650. fixed FP-IBL3 jacobian ping test — shunz / detail
  651. fixed a few compile errors and warnings related to a few sandbox test cases not up-to-date with latest FullPotential PDE/BC implementation — shunz / detail
  652. renamed class & files. re-org include.  started a LIP+IBL3 sandbox case by copying over FP-IBL3 — shunz / detail
  653. allows FP-IBL3 jacobian ping test to run longer on Jenkins — shunz / detail
  654. fixed unit test of auxv aes for 3D full potential — shunz / detail
  655. Reverted some changes in the use of LIP BCs.  These changes should NOT have been made — shunz / detail
  656. relocated a unit test to IBL folder — shunz / detail
  657. passed a few ping tests related to coupled IBL3 — shunz / detail
  658. fixed two unit tests troubled by misuse of MPI communicator — shunz / detail
  659. refactored some explicit instantiations for better generality and less tedious code — shunz / detail
  660. use MatrixS_or_T instead of MatrixS to account for the case of MatrixQ=Real — shunz / detail
  661. relaxed time limit for a block jacobian ping test on Jenkins.  trying to fix an undefined reference error by altering the order of loading lib in CMakeLists — shunz / detail
  662. rename/reorg files/classes to remove FullPotential 3D specificity from Auxv equation implementation — shunz / detail
  663. Relocated Matrix PDE_Qauxi typedef into PDE class in lieu of integrand class — shunz / detail
  664. Looks like Jenkins censored the previous commit msg cuz it contains the word 'e-r-r-o-r'. Amend the commit msg now. relaxed time limit for a block jacobian ping test on Jenkins.  trying to fix an undefined reference e-r-r-o-r by altering the order of loading lib in CMakeLists — shunz / detail
  665. make a method protected as it is not a necessary API for mitLG BC — shunz / detail
  666. Add comments.  Make basis functions class members to reduce re-allocating memory during operator calls — shunz / detail
  667. Refactored LIP PDE to prep it to be run with coupled IBL3.  Added Dirichlet_mitLG BC for LIP — shunz / detail
  668. relaxed machine precision level tolerance in a unit test for intel compiler to pass — shunz / detail
  669. Replaced tedious & repetitive block matrix instantiation statements with macro definitions. Added explicit instantiations for MatrixBlock_4x4 for LIP-IBL3 coupling — shunz / detail
  670. Replaced tedious & repetitive block matrix instantiation statements with macro definitions. Added explicit instantiations for MatrixBlock_4x4 for LIP-IBL3 coupling — shunz / detail
  671. fixed some lingering merge conflicts — shunz / detail
  672. fix no-return warnings in a function with non-void return type — shunz / detail
  673. refactored miscellaneous unit tests. added missing explicit instantiation for 4x4 block matrix — shunz / detail
  674. added option of Dirichlet_mitLG for LIP test --> result matches LinearScalar_sansLG, so not need bother with mitLG — shunz / detail
  675. fix missing return statement issue — shunz / detail
  676. minor cleanup — shunz / detail
  677. add state validity check assertions for Auxv projection integrand class — shunz / detail
  678. refactored LIP BC and PDE to enable coupled LIP-IBL3 test case to run — shunz / detail
  679. simply renamed some variables for brevity — shunz / detail
  680. speed up LIP-IBL3 run by initializing with Falkner-Skan solution and solving IBL3 in uncoupled mode — shunz / detail
  681. make IBL3 LF vs Full upwind flux choice a runtime decision — shunz / detail
  682. fix typos that caused compile errors — shunz / detail
  683. add unit tests to 4-equation 3D IBL PDE — shunz / detail
  684. add explicit instantiation — shunz / detail
  685. set minimum IBL output field order to be 1 — shunz / detail
  686. add/refactor explicit instantiations — shunz / detail
  687. fixed issues with uninitialized data in boundary integand, which became a problem due to recent refactoring to 3D LIP BC (i.e. swtich from assignment to cumulation in data(...)).  Some other fixes to compile warnings — shunz / detail
  688. Implementing N wave problem for Burgers using Advection Diffusion — cwomack / detail
  689. Removed one variable. — cwomack / detail
  690. Tried a few more duct geometries for IBL3 — shunz / detail
  691. fix for messed up merge conflict — allmaras / detail
  692. fix typo in comments — shunz / detail
  693. fix for messed up merge conflict — allmaras / detail
  694. Added Darmofal changes to Nwave code. — cwomack / detail
  695. added checks on SANS_AVRO and SANS_REFINE — allmaras / detail
  696. More changes — cwomack / detail
  697. Changed OutputNDConvert to match Dave's — cwomack / detail
  698. add a manifold (area) grid based on four sides of a box that form a ring — shunz / detail
  699. Added deanna.sewell@colorado.edu to DeveloperEmailAddresses — deanna.sewell / detail
  700. add to unit tests of BoxBoundaries grid (duct ring) — shunz / detail
  701. reverted OutputCell_SolutionErrorSquared to its former functionality (input is Real/VectorS, — allmaras / detail
  702. Added mitStateSpaceTime BC for 1D Advection Diffusion — cwomack / detail
  703. sans-Lagrange adiabatic & isothermal no-slip BCs for NS — allmaras / detail
  704. relaxed tolerance on unit test — allmaras / detail
  705. modified speedCharacteristic for AD with zero advective flux — allmaras / detail
  706. refactoring of BoxBoundary grid: group indexing and area_cell to volume_boundary mapping — shunz / detail
  707. add a test case of LIP-IBL3 for IBL3 on a duct ring (i.e. 4 side walls of a box) — shunz / detail
  708. added sans-Lagrange no-slip BC types to 2D NS — allmaras / detail
  709. MatrixS_MatMul instantiations needed for sans-Lagrange no-slip BCs for NS — allmaras / detail
  710. Explicitly only use one OpenMP thread for PETSc with MPI — galbramc / detail
  711. mat-mul needed for sans-Lagrange no-slip BCs for NS — allmaras / detail
  712. minor refactoring — shunz / detail
  713. added IO files for sans-Lagrange no-slip BCs for NS — allmaras / detail
  714. playing with laminar and turbulent cases for LIP+IBL3 — shunz / detail
  715. minor cleanup — shunz / detail
  716. Turned off full jacobian ping test for 3-eq IBL Quad.  Also some minor clean. — shunz / detail
  717. Correction to last commit message: should be "Turned ON full test" — shunz / detail
  718. changes to HDG FieldWeighted integral for sans-Lagrange no-slip BCs for NS; note — allmaras / detail
  719. Added deltaRef for body force viscous terms — galbramc / detail
  720. some cleanup on panel-IBL3 sandbox case — shunz / detail
  721. Add missing includes — galbramc / detail
  722. Forgot a file — galbramc / detail
  723. Separate constant and quadratic body force viscous terms — galbramc / detail
  724. fixed compile error and warning — shunz / detail
  725. Turned on full jacobian ping test for coupled panel+IBL3 (3-eq) — shunz / detail
  726. Turned on more jacobian ping test — shunz / detail
  727. Fix link error — galbramc / detail
  728. Fix Newton iteration separator — galbramc / detail
  729. Update unit test — galbramc / detail
  730. refactored panel-IBL3 case running setup — shunz / detail
  731. Output IBL results of mass defect flux in lieu of dummy output of qz_X — shunz / detail
  732. bug fix: consistent definition of w and b fields in FieldWeighted — allmaras / detail
  733. Refactored sandbox case setup: panel-IBL3, LIP-IBL3 — shunz / detail
  734. Forgot to suppress one output — galbramc / detail
  735. Return results from Constrained body force solver — galbramc / detail
  736. fix style — shunz / detail
  737. refactor and unit test Auxv equation for 3D flate plate panel — shunz / detail
  738. minor cleanup — shunz / detail
  739. Refactor Auxv equation of 3D flat plate panel method to allow for CG p1 qauxvfld for better DOF efficiency — shunz / detail
  740. Fix bug in deltaRef reduction process — galbramc / detail
  741. fix warning messages — allmaras / detail
  742. minor cleanup — shunz / detail
  743. bug fix: 3D panel method with triangle panels was computing panel area wrongly by double-multiplying reference area.  Added unit tests for this panel method — shunz / detail
  744. fix compile errors caused by typos and lag behind previous  refactoring — shunz / detail
  745. fix style for Vera check — shunz / detail
  746. minor cleanup of sandbox case — shunz / detail
  747. more warning messages — allmaras / detail
  748. fix warnings: comparing int and size_t in for loop — shunz / detail
  749. relaxed tolerance for intel — shunz / detail
  750. fix duplicated BOOST test suite names — shunz / detail
  751. Allow for no-wall distance functions — galbramc / detail
  752. Support 3D Q2 meshes with libMeshb — galbramc / detail
  753. changed full upwind back to using momentum flux correction by default — shunz / detail
  754. Fix warning — galbramc / detail
  755. More changes to get Nwave boom propagation working — cwomack / detail
  756. Redid unit test for nwave — cwomack / detail
  757. Use KSPGMRESModifiedGramSchmidtOrthogonalization which is slower but more stable — galbramc / detail
  758. Format fix — galbramc / detail
  759. Relax tolerance — galbramc / detail
  760. fixed undefined symbol/linking errors.  static const member needs to be define in cpp, strictly speaking.  clang compiler was rigorous enough to catch this, although gnu lets it pass... — shunz / detail
  761. fixed compile warnings about comparing int and unsigned int — shunz / detail
  762. First attempt at extracting Profile Loss for body forces — galbramc / detail
  763. add unit tests for better coverage — shunz / detail
  764. Forgot to update checkInputs — galbramc / detail
  765. More profile loss fixes — galbramc / detail
  766. Use Yuankang Chen data fit value for body force delta**2 term — galbramc / detail
  767. Fixes for profile loss — galbramc / detail
  768. Cppcheck suppressions and Profile loss computed at constant radius — galbramc / detail
  769. One more try at profile loss — galbramc / detail
  770. just renaming — shunz / detail
  771. Start removing perturbed stuff — galbramc / detail
  772. cppcheck fix and suppression — galbramc / detail
  773. clang analyzer fixes — galbramc / detail
  774. Fix cppcheck suppression — galbramc / detail
  775. add derivative calculation for IBL3 laminar eigen-analysis — shunz / detail
  776. More cppcheck fixes — galbramc / detail
  777. More body force output functionals — galbramc / detail
  778. switched to constant density gas model for IBL — shunz / detail
  779. Remove lienar VMSD and perturbed functions — galbramc / detail
  780. Relax tolerance — galbramc / detail
  781. added sansBOOM PDE directories; added standard atmosphere — allmaras / detail
  782. Remove _NL VMSD suffix — galbramc / detail
  783. Relax timing — galbramc / detail
  784. fixed vera squawk — allmaras / detail
  785. refactoring to to keep up with the constant-density gas model in IBL3 — shunz / detail
  786. Enable output functionals on BodyForce LE/TE surfaces — galbramc / detail
  787. Fix body force relative output functionals — galbramc / detail
  788. Relax tolerance — galbramc / detail
  789. Realxer tolerance — galbramc / detail
  790. more refactoring to to keep up with the constant-density gas model in IBL3 — shunz / detail
  791. Turbulence model constructor and unit test formatting changes. Functional SA-Catris models and framework for SA-LRe and SA-R models as well. — waligura / detail
  792. minor compile error/warning fix — shunz / detail
  793. Pulling in updates for the asymptotically consistent error estimate in VMSD. PDEs have gained an additional typedef, the type of the consistent part of the PDE. This is just the PDEs type for almost all PDEs. New PDE types have been added for using the asymptotic consistency correction for Euler/NS/RANSSA with sensor based artificial diffusion (the originals have been retained for the time being). Updates to the problem interface and the error estimation classes for VMSDBR2 have also been made. Using the asymptotically consistent correction requires some additional data, but the interface for problems not needing that functionality are unchanged. — blsc / detail
  794. updated pyrite files — shunz / detail
  795. Cleaned up AVSensor_Source2D.h a little bit to remove some unused code. — blsc / detail
  796. Missed vera warning — blsc / detail
  797. Forgot to turn off verbose and file output — shunz / detail
  798. Missed another vera warning — blsc / detail
  799. relaxed tolerance — shunz / detail
  800. Fix so 2D avro works for wirebody — galbramc / detail
  801. removed reference (&) for meshing parameter vector — allmaras / detail
  802. Added a N-S case of laminar BL — shunz / detail
  803. added velocity integral output — allmaras / detail
  804. Fixed the remaining clang and gnu11 compiler warnings. — blsc / detail
  805. template parameter modification for grid-Laplacian and minor edits — allmaras / detail
  806. cleaned up NS laminar BL sandbox case — shunz / detail
  807. Separated findElement() function into a dedicated file — shunz / detail
  808. Refactored findTraceElement to use simple bounding box check without resorting to the kd-tree hammer...  Added unit test — shunz / detail
  809. Refactor Homotopy so it can be used with any PDE — galbramc / detail
  810. Fix warnings — galbramc / detail
  811. Expose Viscous body force coefficients as user inputs — galbramc / detail
  812. Nightly fixes — galbramc / detail
  813. Added BL profile extraction capability to a NS sandbox case — shunz / detail
  814. Refactored 3D Tet flat plate grid.  Added mutable access to AES in solver interface (but only able to use it by commenting out exception).  More refactoring to NS laminar BL sandbox case — shunz / detail
  815. minor cleanup of sandbox case — shunz / detail
  816. negated lapse rates for standard atmosphere -- now definition consistent with official data — allmaras / detail
  817. fixed warnings: size_t vs int — shunz / detail
  818. turned off projection between different grids when doing solution sequencing because it does not work due to (probably) a bug... — shunz / detail
  819. Fix mistake in body force — galbramc / detail
  820. Change some QCR variable types in PDERANS and other formatting changes for successful make check. Updated PDERANS and b_test to be consistent with current changes on develop — waligura / detail
  821. fixed warnings: size_t vs int — shunz / detail
  822. bug fix in user input — shunz / detail
  823. make NS solution interpreters more consistent between rho-p and rho-T — allmaras / detail
  824. fixed style. minor tweak in PETSc setup in a test case — shunz / detail
  825. Refactored grid and test case for NS LamiBL — shunz / detail
  826. Changes to diffusionViscous and diffusionViscousGradient unit tests to check Catris variations. Still working on the formatting but will push this version for now — waligura / detail
  827. added ORNL MMS function — allmaras / detail
  828. Pushing again with vera changes. Something seems to be up with my vera check — waligura / detail
  829. Another vera message I did not see before sending — waligura / detail
  830. Relaxed convergence tolerance in a test case — shunz / detail
  831. Further formatting changes to PDERANS and another vera error I missed initially — waligura / detail
  832. Further formatting changes fixing most of the alignment issues and getting rid of the -= — waligura / detail
  833. fixed bug in std::vector initialization for standard atmosphere class — allmaras / detail
  834. Refactored BL sampling function in NS LamiBL test case — shunz / detail
  835. Add ddelta dump for RotorSource — galbramc / detail
  836. Fix warning — galbramc / detail
  837. Working Changes: Finalized AD Burgers test case for boom propagation — cwomack / detail
  838. Small cleanup — galbramc / detail
  839. Remove output_grm — galbramc / detail
  840. 1st pass at exact ray path for sansBOOM — allmaras / detail
  841. Wording changes to SATurbModel and shortening of nonc variables — waligura / detail
  842. Fixed long line.  Separated functions into a cpp file — shunz / detail
  843. Fixed compile and linker errors in findTraceElement(...) — shunz / detail
  844. Added support for S-shaped duct geomerty in flat plate grid in 3D — shunz / detail
  845. adding in the first go at untest SA_R and SA_LRe modifications for 2D. Also making sure all pushes are going through before moving on. — waligura / detail
  846. fixed file I/O mode — shunz / detail
  847. added check for file I/O — shunz / detail
  848. Added a sin duct geometry for IBL3 sandbox case — shunz / detail
  849. Initial commit of sansBOOM PDE implementation with the advective and viscous terms defined — darmofal / detail
  850. refactored Flux_mitState BC implementation for IBL3 to use fluxNormal() instead of evaluating it in the integrand class — shunz / detail
  851. Minor fixes for artificial viscosity — galbramc / detail
  852. Turned on mitLG Dirichlet BC for LIP-IBL3 case at inlet.  Fixed buggy isValidState check that checks uninialized boundary state qB — shunz / detail
  853. Initial implementation of sansBOOM BCs and Adapt2D_DGBR2_sansBOOM_toy — darmofal / detail
  854. Forgot to commit a few lines — shunz / detail
  855. Some more edits to sansBOOM PDE/BC implementation — darmofal / detail
  856. Changed default xtr parameter in IBL transition model from max Real (causing floating point overflow error) to 1e5 — shunz / detail
  857. Fixed (1) division by zero in cut-cell natural transition and (2) unit test for default xtr value — shunz / detail
  858. Still not compiling.  Pushing to allow Marshall to look at N=1 issue — darmofal / detail
  859. Initializing a variable in jacobianFluxViscous correctly — waligura / detail
  860. Allow PDE to use ArrayQ = VectorS<1,T> — galbramc / detail
  861. Homotopy dict fixes — galbramc / detail
  862. Final changes to LocalLaxFriedrichs1D flux function and AD Burgers toy — cwomack / detail
  863. Remove GLPK — galbramc / detail
  864. Missed one — galbramc / detail
  865. Pushing current version of sansBOOM to repo — darmofal / detail
  866. Enable 3D sourcePositivity for NS and RANSSA — galbramc / detail
  867. Most recent mods to sansBOOM implementation — darmofal / detail
  868. Removed changes to Lagrange Triangle — cwomack / detail
  869. Fix compile error — galbramc / detail
  870. Fixed Robin boundary condition for Euler/NS/RANSSA with sensor equation. Updated unit tests to reflect fix. — blsc / detail
  871. Compile fixes — galbramc / detail
  872. Another compile fix — galbramc / detail
  873. Corrected Vera errors — cwomack / detail
  874. More compile fixes — galbramc / detail
  875. Fix consistency test — galbramc / detail
  876. Modified Discretization unit tests to be consistent with linesearch — cwomack / detail
  877. Removed unused variable and changed abs -> fabs — cwomack / detail
  878. Fix parallel HField calculations. Fix couchmanMatrix for RANS. Cleanup Homotopy. Add the abilty to only get possessed DOF even for Statically Condensed systems. — galbramc / detail
  879. Fix compile errors — galbramc / detail
  880. Added updated VMSDBR2 projection. Default is off. To turn on define USE_FULLSPACE_PRJECTION_METHOD_2 at the top of your sandbox case. — blsc / detail
  881. sansBOOM PDE, BC, Output implementation for DGBR2 with advection and diffusion terms — darmofal / detail
  882. Adding two generalized cases to the sandbox to deal with gaps in avro use and SA RANS for adiabatic and isothermal flows. Will be good to keep these consistent with future homotopy and RANS changes — waligura / detail
  883. Removing flatplate xfld mesh option — waligura / detail
  884. removing xfield definition in supersonic case too — waligura / detail
  885. Fixed some missing instantiations needed for sansBOOM — darmofal / detail
  886. A couple more instantiations added... this time because the intel compiler was complaining (though the other compilers were fine... ARGH) — darmofal / detail
  887. Adjusting slightly tolerance on unit tests — darmofal / detail
  888. Updates to BDF time marching to allow ramping of integration order to provide the needed order-dependent past data — deanna.sewell / detail
  889. Modified line search test and removed residual dat file — cwomack / detail
  890. Cleanup BCmitAVsensor — galbramc / detail
  891. Forgot new files — galbramc / detail
  892. Allow Homotopy to use pre-defined BCVectors — galbramc / detail
  893. Make AVSensor_Source_VMSD_SPD consistent between 2D and 3D — galbramc / detail
  894. Fix compile errors — galbramc / detail
  895. vera fix — galbramc / detail
  896. Fix test for parallel — galbramc / detail
  897. Cleanup file dump — galbramc / detail
  898. Use Metric to compute HField_DG instead of size/perimiter — galbramc / detail
  899. Add ResidualNorm_InvJac_DOF_Weighted to VMSDBR2 — galbramc / detail
  900. Revert last change — galbramc / detail
  901. Fix compile error, and more verbose assertion — galbramc / detail
  902. Update unit tests — galbramc / detail
  903. Another unit test update — galbramc / detail
  904. Add ImpliedMetric for Line 2D element. — galbramc / detail
  905. Fix unit test — galbramc / detail
  906. Use SANS_CHECK_CLOSE — galbramc / detail
  907. Remove Burgers PDE — galbramc / detail
  908. SUPG/GLS/VMS tau code clean-up; added unit tests for P2 and P3 — allmaras / detail
  909. Add dict function to DictKeyPair — galbramc / detail
  910. Added Axisymmetric DBL scalar function in 2D with unit tests — cwomack / detail
  911. Added vera exclusion for ScalarFunction2D — cwomack / detail
  912. Updates to sansBOOM including improved IC implementation including ability to read nearfield from a file and also more unit tests — darmofal / detail
  913. Compressible mechanical power calculation — galbramc / detail
  914. Missing a newline at end of ICsansBOOM.cpp.  Fixed. — darmofal / detail
  915. Added Axisymmetric flux functions + unit tests — cwomack / detail
  916. Missing a return statement — darmofal / detail
  917. Found sign error in upwind flux in sansBOOM. — darmofal / detail
  918. Fix compile error and warnings from new clang on macOS — galbramc / detail
  919. Relax tolerance — galbramc / detail
  920. Another warning fix — galbramc / detail
  921. A few more warning fixes — galbramc / detail
  922. More warning fixes for new clang — galbramc / detail
  923. One more warning fix — galbramc / detail
  924. Remove boost libary from external and add it to gitignore — galbramc / detail
  925. More cleanup — galbramc / detail
  926. modified ODE definition for high-Re version of SA for incompressible RANS — allmaras / detail
  927. Mechanical power correction — galbramc / detail
  928. Another mechanical power correction — galbramc / detail
  929. Remove Sensor template from AVSensor_Source3D_PressureGrad — galbramc / detail
  930. moved typedef HType to eliminate un-used typedef warning when USE_GRID_LAPLACIAN turned on — allmaras / detail
  931. Fix compile error — galbramc / detail
  932. Return delta's for both LE and TE edges for BodyForces — galbramc / detail
  933. Add Deviation Angle Square output function for Body Forces — galbramc / detail
  934. Missing include — galbramc / detail
  935. More compile fixes — galbramc / detail
  936. Fix compile warnings — galbramc / detail
  937. Revert MechanicalPower calculation. Fix InteriorTrace partitioning for JacobianFunctionalInteriorTrace. Fixes for body force optimization. — galbramc / detail
  938. Use consistent limited gradients in PrimitiveSurrogate_btest — galbramc / detail
  939. Fix warnings — galbramc / detail
  940. Verbose output for computing BodyForce gradients — galbramc / detail
  941. Compile fix for using grid laplacian — galbramc / detail
  942. Fix PETSc/TAO deprecation warnings — galbramc / detail
  943. Update to supersonic test case — waligura / detail
  944. Working supersonic case for develop — waligura / detail
  945. Try again to see if tests time out — waligura / detail
  946. Add CompressiblePower calculation — galbramc / detail
  947. Additional unit tests for new sensor with RANS. Found and fixed a few bugs in PDERANSSA2D and PDEEuler3D. Cleaned up solver interface for VMSD-BR2 somewhat. More unit tests and tidy up to come. — blsc / detail
  948. Add another quadratic viscous term to Body Force model — galbramc / detail
  949. Updated surface flux writer for tecplot (VMSDBR2 specific). Added developer exceptions in to the Euler with artificial diffusion space-time calls since they're not unit tested. — blsc / detail
  950. Add 8th order term to Body Forces — galbramc / detail
  951. Added the ability to specify is artificial diffusion should be applied to SA equation at run time. More unit tests. Caught a few more bugs. — blsc / detail
  952. More BodyForce output functionals — galbramc / detail
  953. Add vera exclusions — galbramc / detail
  954. Warning fixes — galbramc / detail
  955. Properly ignore ._ files in CMake — galbramc / detail
  956. Missing override keyword in SolverInterface_VMSD_BR2. ErrorOrder_2D_VMSDBR2_Triangle_AD_btest runs in serial (communicator is split and each rank runs independently). — blsc / detail
  957. One more warning fix — galbramc / detail
  958. Warning shows up in GNU 8 — galbramc / detail
  959. Fix warning — galbramc / detail
  960. Relax tolerances for intel — galbramc / detail
  961. needsSolutionGradient set to true for EntropyPower functional — galbramc / detail
  962. Add Entropy to rotor output — galbramc / detail
  963. Updated tolerance for intel in AVSensor_Source3D_Euler_btest — blsc / detail
  964. Fix EntropyPt calculation. Remove old Euler3D source test. — galbramc / detail
  965. added gradients for standard atmosphere — allmaras / detail
  966. added isothermal atmosphere model — allmaras / detail
  967. added speed of sound to atmospheric models — allmaras / detail
  968. Relax tolerances for intel — galbramc / detail
  969. More relaxed intel tolerances — galbramc / detail
  970. One more method for VMSD data transfer — galbramc / detail
  971. Stabilized output for PV functional — galbramc / detail
  972. First draft of Axisymmetric DBL problem, vera not working, may require multiple commits to get through jenkins — cwomack / detail
  973. Fixed scope issues — cwomack / detail
  974. Removed untested upwind option from isothermal walls in PDENavierStokes2D. It did not seem to be being used by any sandbox case or test. — blsc / detail
  975. fixed vera errors — cwomack / detail
  976. Actually remove the code related to the upwind flag. — blsc / detail
  977. added output axisymmetric unit tests — cwomack / detail
  978. Changed unit test tolerance — cwomack / detail
  979. Generalized axisym DBL for any z0 z1 — cwomack / detail
  980. fixed vera errors — cwomack / detail
  981. Add asymmetric term for rotor source — galbramc / detail
  982. Fix compile errors — galbramc / detail
  983. Fix bug in last commit — galbramc / detail
  984. Cleanup sourcePositivity — galbramc / detail
  985. Work around more floating point issues — galbramc / detail
  986. More precision cleanup for AV source — galbramc / detail
  987. Fogot a file — galbramc / detail
  988. Allow setting critical surrogate values in 3D — galbramc / detail
  989. Fix compile error — galbramc / detail
  990. Compiler error and warning fixes — galbramc / detail
  991. Make outer diffusion positvity source consisent with inner — galbramc / detail
  992. Warning and tolernace fixes — galbramc / detail
  993. Fix compile error — galbramc / detail
  994. Cleanup 2D PressureGrad sensor — galbramc / detail
  995. Relax tolerance — galbramc / detail
  996. Missed one — galbramc / detail
  997. Missed one more — galbramc / detail
  998. Relax tolerance — galbramc / detail
  999. Consistent 3D positvity source with Ben's thesis — galbramc / detail
  1000. Add asymmetric sensitvities for body forces. Some more cleanup of shock capturing. — galbramc / detail
  1001. Make PDEmitAVDiffusionOuter2D.h consistent — galbramc / detail
  1002. Fix warning and typo — galbramc / detail
  1003. Relax tolerance and fix warning — galbramc / detail
  1004. One more tolerance relaxation — galbramc / detail
  1005. Add parameters to rotate body force normal field — galbramc / detail
  1006. Forgot instantiation — galbramc / detail
  1007. Make lifting operator calculation lazy to prevent computing lifting operators in isValidState. Homotopy fix for negative lambda. Charachteristic SupersonicOutflow in 2D. Dirichlet NoSlip BC for Sensor PDE. Some cleanup of MatrixS_Diag. — galbramc / detail
  1008. Fix test for last commit — galbramc / detail
  1009. Fix for lazy lifting operator calculations — galbramc / detail
  1010. standard atmo: moved non-templated functions to *.cpp file — allmaras / detail
  1011. stupid tabs!! — allmaras / detail
  1012. namespace needed in cpp file — allmaras / detail
  1013. Fix for turning off USE_CORRECTION_TERM — galbramc / detail
  1014. removed DeveloperException check for hessians of density-temperature primitive vars — allmaras / detail
  1015. Another correction to turning off USE_CORRECTION_TERM — galbramc / detail
  1016. Relax tolerance — galbramc / detail
  1017. Only compute lifting operatos if setSolutionField is called. Needed for proper error estimates. — galbramc / detail
  1018. More intel tolerance relaxing — galbramc / detail
  1019. Remove DeveloperException check — galbramc / detail
  1020. Use implied metric in cost calculation for isotropic optimization — galbramc / detail
  1021. Relaxier tolerance — galbramc / detail
  1022. Another tolerance relaxation — galbramc / detail
  1023. Intel... — galbramc / detail
  1024. Intel... — galbramc / detail

#1509 (Apr 30, 2022, 10:25:11 PM)

  1. added an exception for stagnation point in IBL3 4-eqn formulation — shunz / detail
  2. Added flag to choose whether to include the sensor equation in the residual calculation and convergence checks — blsc / detail
  3. Removed default parameters in PDEmitAVSensor constructors associated with including the sensor equation in the residual calculation — blsc / detail
  4. added easier macro toggle for turning on/off amp+lag equations — shunz / detail
  5. fix formatting — shunz / detail
  6. add exception for corner case — shunz / detail
  7. minor refactoring of torpedo case for IBL3 in sandbox — shunz / detail
  8. added but commented out a hack for trying power-law crossflow velocity distribution — shunz / detail
  9. added BC dict missing from a previous commit.  minor cleanup of 4-eqn IBL3 stuff — shunz / detail
  10. updated H22 turb closure — shunz / detail
  11. Add Kyle Anderson 'boosting', but dissabled for now — galbramc / detail
  12. Add rotor source tecplot dump — galbramc / detail
  13. test fix: added required Dirichlet data for PyDict — allmaras / detail
  14. added PyDict option for including viscous fluxes in BCNone (default = false, no viscous fluxes); — allmaras / detail
  15. corrected PDE/BC dump files — allmaras / detail
  16. Forgot a file — galbramc / detail
  17. Fix segfault — galbramc / detail
  18. Fix bug in lean for camber blade — galbramc / detail
  19. Add quadratic camberline — galbramc / detail
  20. Upgrade intel compiler — galbramc / detail
  21. Add some instantiations — galbramc / detail
  22. Update MKL path for Intel oneAPI — galbramc / detail
  23. Added Space Time Case — jta29 / detail
  24. Fixes for sansLIPAIM — galbramc / detail
  25. reverted turbulent Cf1 and Hs1 closure to 2D — shunz / detail
  26. minor tweaks/comments — shunz / detail
  27. Started another set of turbulent closure models by copying over existing ones — shunz / detail
  28. added turb Cf1 closure — shunz / detail
  29. added turb H*1 closure — shunz / detail
  30. Updated Insantiation — jta29 / detail
  31. updated CDc closure — shunz / detail
  32. updated turb Cf2 closure — shunz / detail
  33. updated turb Hc2 closure — shunz / detail
  34. fixed function signature — shunz / detail
  35. fixed typo in function call. switched default to using new regularized turb closure — shunz / detail
  36. switched back to using 2D turb H*1 closure — shunz / detail
  37. Remove trailing white space — jta29 / detail
  38. Removed trailing white space — jta29 / detail
  39. added output of closure model derivatives for IBL3 flux system eigen-analysis — shunz / detail
  40. fixed line-length squawk — allmaras / detail
  41. Minor cleanup — galbramc / detail
  42. Fix instantiations — galbramc / detail
  43. made PyDict required parameter in ctor; moved discretization/stabilization parameter — allmaras / detail
  44. made SolutionData* unit tests consistent with ctors — allmaras / detail
  45. made sandbox codes consistent with changes to SolutionData*: (a) PyDict parameter — allmaras / detail
  46. removed new unit test (committed too soon) — allmaras / detail
  47. fixed unused variable squawk — allmaras / detail
  48. moved stabilization parameter next to PDE consistent with SolutionData* — allmaras / detail
  49. move stab parameter in SolutionData call — allmaras / detail
  50. made system tests consistent with SolutionData* — allmaras / detail
  51. removed duplicate look-up filename definitions — allmaras / detail
  52. added required PyDict() argument to SolutionData* — allmaras / detail
  53. removed CG two-phase test case (will bring it back later) — allmaras / detail
  54. making file name conventions consistent: "Galerkin_Stablized" is anything involving — allmaras / detail
  55. line length squawk — allmaras / detail
  56. Nightly fixes — galbramc / detail
  57. fixed some "_Stabilized" typos; removed unused includes from VMSD toys — allmaras / detail
  58. fixed "_Stabilized" typos — allmaras / detail
  59. fixed constructor bug for var args; now all ctors are consistent in "BCArgs&&... args" — allmaras / detail
  60. Fix SANS_Commit script — galbramc / detail
  61. Fix warning — galbramc / detail
  62. Correct Brenner AV in 2D and add 3D — galbramc / detail
  63. Arrary bound fix — galbramc / detail
  64. Warning fixes and relax nightly tolerance — galbramc / detail
  65. Don't try to use solutions from diverged linear solver — galbramc / detail
  66. added second generalized-H tensor that gives M-type grid Laplacian; it is the — allmaras / detail
  67. added second path that assumes incoming H field is same as original H^2 (computed — allmaras / detail
  68. added second path that assumes incoming H field is J*J^t (computed — allmaras / detail
  69. uncommented scaleArtificialViscosity function needed for Homotopy; added unit tests — allmaras / detail
  70. fixed scalar-h code for 1D; clean-up for 2D/3D — allmaras / detail
  71. added prescribed CD(x,y) field — shunz / detail
  72. Various small cleanups — galbramc / detail
  73. added optional vertex coordinates for single triangle/tet constructors — allmaras / detail
  74. Update unit tests — galbramc / detail
  75. Missed one — galbramc / detail
  76. Added prescribed CD field for inversion of CDiss correction factor beta — shunz / detail
  77. Encapsulate regularization constants in one header — hcarson / detail
  78. style ding — hcarson / detail
  79. minor tweaks of torpedo case IBL3 setup — shunz / detail
  80. Dump out unconverged restart files — galbramc / detail
  81. Dump out unconverged restart files — galbramc / detail
  82. Added lines for extracting final qfld — hcarson / detail
  83. Add AV to SA equation in 3D — galbramc / detail
  84. Fix surreal type — galbramc / detail
  85. Fix surreal type — galbramc / detail
  86. Mucking with a correction multiplier term to the dissipation relation — shunz / detail
  87. fixed long lines — shunz / detail
  88. Update test for previous commit — galbramc / detail
  89. mucking with dissipation relation inversion — shunz / detail
  90. Use MKL_PARDISO for PETSc DirectLU solver — galbramc / detail
  91. Only use one thread for DirectLU MKL_PARDISO — galbramc / detail
  92. move the PETSc solve time print — galbramc / detail
  93. Add PETSc option to scale by diagonal — galbramc / detail
  94. Added but commented out hacks with inflow BC bump/step features — shunz / detail
  95. Added a few prescribed CD(x,y) field based on RANS data — shunz / detail
  96. fillSystemVector syncs MPI DOF. Fix Sensor symmetry BC for 3D. More parallel testing with NaN's — galbramc / detail
  97. added new beta closure — shunz / detail
  98. Fix compile errors — galbramc / detail
  99. Fix compile errors — galbramc / detail
  100. Refactor isValidState checks in parallel — galbramc / detail
  101. Compile fix — galbramc / detail
  102. One more isValidState fix — galbramc / detail
  103. Add positive preserving source for 3D. Dissabled for now. — galbramc / detail
  104. Compile fix — galbramc / detail
  105. Add some asserts to 'Node Rank' for xfld tecplot dump — galbramc / detail
  106. adding curvilinear transformation functionality — ursachi / detail
  107. missed some files — ursachi / detail
  108. Also dump out xfld spirit — galbramc / detail
  109. Add set_dot and continuously relax sewFace tolerances for CamberBlade LE and TE surfaces. — galbramc / detail
  110. Format fix — galbramc / detail
  111. Fix the last fix — galbramc / detail
  112. Actually fix the fix of the last fix for the previous fix — galbramc / detail
  113. Add UpdateFraction to Galerkin Stabilized — galbramc / detail
  114. Added macro to toggle the use of prescribed CD(x,y) field — shunz / detail
  115. Allow MaxChangeFraction to work with SteveLogic — galbramc / detail
  116. Skip zombie DOF for UpdateFraction check — galbramc / detail
  117. fixed outdated class template argument — shunz / detail
  118. More fixes to allow UpdateFraction with SteveLogic — galbramc / detail
  119. Don't mix units — galbramc / detail
  120. fixed more outdated class template argument — shunz / detail
  121. Fix unit tests — galbramc / detail
  122. EmbeddedCGField fixes — galbramc / detail
  123. Fix one more missing EmbeddedCGField — galbramc / detail
  124. Updated Bernstein bases for use in CG fields. We dont have Hessians implemented, so stabilized CG needed a change to only calculate Hessians if we have stabilization turned off. To go above p3 in 3D CG, we need to change the basis functions to be match our implied ordering. Since Bernstein polynomials are modal and not hierarchical, we need to solve a linear system to do projections between orders. — blsc / detail
  125. Fixed unit tests.  Turned off the correction when ctau surpasses ctau_Tinit in 3D IBL_foureqn — shunz / detail
  126. Added 4D Bernstein bases (linear) on pentatope, with CG and DG fields — blsc / detail
  127. updated pyrite files for IBL3 four eqn laminar — shunz / detail
  128. fixed undefined references — shunz / detail
  129. git was not happy about the commit message...trying to fix it here..this commit is about adding definition of static class members in cpp file — shunz / detail
  130. added transformation function to ghost boundaries — ursachi / detail
  131. added test case — ursachi / detail
  132. cleaned up test case — ursachi / detail
  133. Adding adapt case with P1 corner singularity divergence weirdness. P2 and 3 are fine, but P1 error blows up 4 orders of magnitude.... — hcarson / detail
  134. Update tolerances on L2 project tests for Bernstein bases. Fix NaN issue with auxiliary problem for Homotopy. — blsc / detail
  135. Update tolerances for intel — blsc / detail
  136. Add Lagrange Node tecplot dump for CG fields — galbramc / detail
  137. Fix last commit — galbramc / detail
  138. added PyDict parameter (StatusOKatMaxIterations) to change status when solver hits — allmaras / detail
  139. Updated tecplot CG dump — galbramc / detail
  140. Compile fix — galbramc / detail
  141. added annotation — shunz / detail
  142. Allow zero bodies in a model — galbramc / detail
  143. Add Cylindrical system for Coles profile — galbramc / detail
  144. Maybe compile fixes — galbramc / detail
  145. Fix CG tecplot dump — galbramc / detail
  146. Default coordinate system for Coles profile — galbramc / detail
  147. intermediate commit in case of ACDL power down. sandbox still should not compile yet — shunz / detail
  148. 1st try at 3D NS/RANS no-slip isothermal/adiabatic BCs via Robin sans-Lagrange — allmaras / detail
  149. added -DUSE_GRID_LAPLACIAN to makefiles in all directories containing files where the #ifdef is used — allmaras / detail
  150. make FieldWeighted consistent with BasisWeighted (mostly involved adding param to PDE calls) — allmaras / detail
  151. replaced hard-coded false to PDE check for including viscous terms in boundary flux — allmaras / detail
  152. instantiations needed for uniform source in sensor PDE for artificial viscosity — allmaras / detail
  153. added #pragma message to all *.h files that use USE_GRID_LAPLACIAN; this will — allmaras / detail
  154. removed explicit #define/#undef USE_GRID_LAPLACIAN from unit tests that use this — allmaras / detail
  155. added Tq & Tg template parameters for sourceTrace — allmaras / detail
  156. added p_ref() function to density model to provide a means of accessing reference — allmaras / detail
  157. changed SANS_ASSERT to SANS_ASSERT_MSG to output message on error — allmaras / detail
  158. fixed typo: D1 -> D2 — allmaras / detail
  159. added PyDict option to specify Dirichlet data for Robin BC for AV; useful for — allmaras / detail
  160. added FieldWeighted unit test for sans-Lagrange Dirichlet BCs for Euler — allmaras / detail
  161. added test for jacobian/metric of an equilateral triangle — allmaras / detail
  162. exact data explicitly provided, rather than determined by do-loop dot product accumulation — allmaras / detail
  163. added unit grid where coordinates of all 4 corners can be input; facilitates making — allmaras / detail
  164. typo fix in unit test — allmaras / detail
  165. Enabled move construction and assignment. — hcarson / detail
  166. Added ability to output a temporary field containing the fully reconstructed p' adjoint — hcarson / detail
  167. Added some more move constructors. — hcarson / detail
  168. turn off clang warnings for '#pragma message' — allmaras / detail
  169. It's not a pointer you idiot. — hcarson / detail
  170. fixed quad order bug and added assert that all quad orders are the same — ursachi / detail
  171. More tecplot dump fixes — galbramc / detail
  172. fixed typo in unit test — allmaras / detail
  173. vera: lines too long — allmaras / detail
  174. Compile fix — galbramc / detail
  175. fixed quadrature bug elsewhere and fixed warnings — ursachi / detail
  176. replace several repeats of explicit pow(*, 2) coding with call to private function — allmaras / detail
  177. new MatrixS matmul instantiations needed for sans-Lagrange Robin BCs of no-slip isothermal NS/RANS 3D — allmaras / detail
  178. fix to test file to actually call the write method — hcarson / detail
  179. added Robin_sansLG to VMSD and VMSD-BR2 — allmaras / detail
  180. Hopefully finally got the link problems fixed — galbramc / detail
  181. Enabled move construction and assignment. — hcarson / detail
  182. Added some more move constructors. — hcarson / detail
  183. Added ability to output a temporary field containing the fully reconstructed p' adjoint — hcarson / detail
  184. refactored 3D box hex grid to allow for arbitrary list of node coordinates — shunz / detail
  185. added DOF count checks in box hex grid — shunz / detail
  186. more #include's for Robin_sansLG BCs — allmaras / detail
  187. added curvilinear transformation and unit tests — ursachi / detail
  188. added missing includes (for std::shared_ptr) — ursachi / detail
  189. added another missing include for std::shared_ptr — ursachi / detail
  190. hopefully final include for shared_ptr — ursachi / detail
  191. fixed cmakefiles — ursachi / detail
  192. added CG field instantiation for IBL3 Qauxv field — shunz / detail
  193. minor annotation — shunz / detail
  194. refactoring to show intention more clearly — shunz / detail
  195. made some fixes for failing tests — ursachi / detail
  196. added/deleted #include's for IntegrandBoundaryTraces; added Robin_sansLG where needed, — allmaras / detail
  197. new MatrixS matmul instantiations needed for Robin_sansLG BCs — allmaras / detail
  198. Trying to fix vera errors — jta29 / detail
  199. fixed spacetime exception — ursachi / detail
  200. minor cleanup — shunz / detail
  201. Add missing USE_GRID_LAPACIAN. Minor PDERANSSA formatting fixes. Fix for Coles RANSSA. — galbramc / detail
  202. Add instantiation — galbramc / detail
  203. Use H instead of H^2 in Robin BCs for AV when USE_GRID_LAPLACIAN is defined. — savithru / detail
  204. Update BCRANSSA3D — galbramc / detail
  205. Fixed missing method for dumping the perturbation field. In the process added many additional move constructors/assignments. Also added an implicit conversion for ElementPair, allowing it to be inserted directly into map/unordered map/set etc. A bunch of small house cleaning tasks too. Deleted explicit constructors that could just be default. — hcarson / detail
  206. quadOrder check shouldn't be done if using TopoD1 — ursachi / detail
  207. Fixing errors — jta29 / detail
  208. updated unit tests for curvilinear transformation — ursachi / detail
  209. accidentally deleted default constructor — hcarson / detail
  210. EVEN MORE MOVE CONSTRUCTORS — hcarson / detail
  211. cleaning up of failing unit tests (mainly changing some — ursachi / detail
  212. forgot to delete something — ursachi / detail
  213. removed unnecessary tecplot dumps — ursachi / detail
  214. another attempt to make jenkins stop complaining, now explicitly — ursachi / detail
  215. UniqueTrace a mutable struct. Immutability doesn't buy anything, and just prevents compiler optimization. Additionally, deleted a large number of unneeded constructors, as the compiler provided versions are better and safer. If you write no code, you can write no bugs! See CPP guidelines rule of zero — hcarson / detail
  216. fixed warning — ursachi / detail
  217. deleted unnecessary stuff and cleaned up some additional warnings — ursachi / detail
  218. adding back the default constructor, something funky happens with default initializer. Also change MatrixS to use stdarray, and then to have the 5 constructors as defaults. — hcarson / detail
  219. Fix RANS BC with Conservative variables. More RANSBC unit tests. Add smoothmin linearization. First attempt at blade optimization. — galbramc / detail
  220. Forgot file — galbramc / detail
  221. Add missing include — galbramc / detail
  222. Missed a file — galbramc / detail
  223. Compile error fixes — galbramc / detail
  224. Missed one — galbramc / detail
  225. added checkInputs calls when setting up transformation function — ursachi / detail
  226. fixed memory issue when assigning qfld DOFs — ursachi / detail
  227. minor addition of annotation — shunz / detail
  228. deleted more unnecessary functions — ursachi / detail
  229. Add EGADS ruled wrapper — galbramc / detail
  230. Fix NormalField linearization. — galbramc / detail
  231. Forgot some files — galbramc / detail
  232. Add vectorization — galbramc / detail
  233. Fix Surreal changes — galbramc / detail
  234. bounding box should search along traces when using transformation even — ursachi / detail
  235. added 3D entropy variables for Euler/NS — allmaras / detail
  236. Fix compile error — galbramc / detail
  237. Fix ruled interface — galbramc / detail
  238. Fix warning — galbramc / detail
  239. Use PTC solve before constrained solve with blade optimization — galbramc / detail
  240. Fix warning — galbramc / detail
  241. Fix uninitialized data. Dissable normal field sensitivity for now. — galbramc / detail
  242. Add missing instantiation — galbramc / detail
  243. Fix BodyForce requiring pProp specified — galbramc / detail
  244. flipped output_stream flag to true (thought this was down with last commit, but not) — allmaras / detail
  245. unit tests for Robin_sansLG BCs for 3D NS — allmaras / detail
  246. Restore DeveloperEmailAddresses — galbramc / detail
  247. lowered tolerance for test — ursachi / detail
  248. Updated nu-max calculation when USE_GRID_LAPLACIAN is defined. Added a default argument to AVSensor_Source2D_TwoPhase to model a constant source term if needed. — savithru / detail
  249. cleaned up and fixed sandbox case on FP for S-shaped duct — shunz / detail
  250. commented out hacks — shunz / detail
  251. Starting to implement BCDataFields by copying over stuff — shunz / detail
  252. added and experimented with BCDataFieldManager class.  Ready to further extend this for BCDataField implementation. — shunz / detail
  253. minor commenting — shunz / detail
  254. minor refactoring before adding BC data field stuff — shunz / detail
  255. Initial prototype of introducing BC data fields into algebraic equation set and instantiations of IntegrandBoundaryTraces — shunz / detail
  256. trying to equip IntegrandBoundaryTrace with BCDataField: succeed in contructor but failed due to preset Integrand type defi in IntegrateBoundaryTrace_Dispatch.dispatch()....now turning off all the hacks, which will be removed in the future — shunz / detail
  257. some tidying up — shunz / detail
  258. hide away to-be-removed stuff/hacks — shunz / detail
  259. Refactored 3D full potential stuff, particularly adding wall transpiration BC.  Start to pave ways for including BC data field in BC class — shunz / detail
  260. Avoid failed solves when optimizing body force blades — galbramc / detail
  261. Fix for last commit — galbramc / detail
  262. Vera fixes — galbramc / detail
  263. Tried wall transpiration in S-duct FP case — shunz / detail
  264. append BC data field to 3D FP wall transpiration BC — shunz / detail
  265. renaming variables for clarity — shunz / detail
  266. Enabled using BC data field by passing it to the BC class.  Tested on full potential 3D case.  Removed previous attempt of trying to let integrand class to own BC data field — shunz / detail
  267. removed code from a previous attempt to implement BC data field — shunz / detail
  268. Change objective return on solve failure for BodyForce optimization — galbramc / detail
  269. refactored BC data evaluation call from element — shunz / detail
  270. Started working on Auxv projection equation for IBL+FP coupling: finished the qauxv component in the projection integrand — shunz / detail
  271. minor refactoring to reduce unnecessary memory allocation — shunz / detail
  272. modulize velocity calculation in 3D FP solver — shunz / detail
  273. removed const reference for interior trace groups member data and made it a copy; — allmaras / detail
  274. added option to return success flag if max number of iterations are reached without converging; — allmaras / detail
  275. added interface for derivedSurfaceQuantity with parameter — allmaras / detail
  276. typo fixes — shunz / detail
  277. Added new 4-variable Qauxv formulation and associated Field instantiations — shunz / detail
  278. Initial work on Auxv equation with 3D FP solver: compiles now but needs to be completed — shunz / detail
  279. Some cleanup on Auxv equation (with 3D FP) residual — shunz / detail
  280. some more cleanup before completing Auxv equation jacobian — shunz / detail
  281. Auxv equation now works for a trivial test case.  Now need to work out volume-surface grid connectivity — shunz / detail
  282. minor cleanup — shunz / detail
  283. minor refactoring/annotation — shunz / detail
  284. Initial work on contructing surface mesh corresponding to a boundary group of volume mesh (BoxHex). TBD: Needs nontrivial testing and interior trace groups — shunz / detail
  285. tweaks — hcarson / detail
  286. Added nontrivial test for Auxv projection from FP solution — shunz / detail
  287. minor typo fix in comments — shunz / detail
  288. Added interior trace elements to the boundary surface mesh of BoxHex.  Tried/verfified solving IBL3 on this surface mesh in the flat plate laminar BL case — shunz / detail
  289. minor cleanup — shunz / detail
  290. Update for CentOS 7 — galbramc / detail
  291. minor cleanup/refactoring — shunz / detail
  292. Upgrade AFLR — galbramc / detail
  293. Fix unit test — galbramc / detail
  294. Add a stack parameter to CamberBlade — galbramc / detail
  295. Add option to constrain Mach number with BodyForces — galbramc / detail
  296. Fixes for specifying NormalMach as BodyForce constraint — galbramc / detail
  297. Rework Pprop output functional for BodyForces. Fix assertions for SAQCR. — galbramc / detail
  298. Unit test fixes — galbramc / detail
  299. Relax tolerance — galbramc / detail
  300. Fix bug in AFLR interface — galbramc / detail
  301. Relaxed basis function tolerances for intel — galbramc / detail
  302. Relax DG tolerances for intel — galbramc / detail
  303. Lots of warning fixes — galbramc / detail
  304. Tolerance fixes for intel compiler — galbramc / detail
  305. More warning fixes — galbramc / detail
  306. More warning fixes. Move adjoint MPI sync. — galbramc / detail
  307. Fix compile error — galbramc / detail
  308. Missed a warning — galbramc / detail
  309. Another warning fix — galbramc / detail
  310. More warning fixes — galbramc / detail
  311. Relax timeout — galbramc / detail
  312. Nightly fixes. Make TRIANGLE optional. — galbramc / detail
  313. cppcheck fixes — galbramc / detail
  314. Upgrade to ESP 1.19 (minimium required). Lots of cppcheck fixes. — galbramc / detail
  315. Warning fixes for CAPS — galbramc / detail
  316. Fixes to make triangle optional — galbramc / detail
  317. Dissable a test for now — galbramc / detail
  318. Missed a TRIANGLE suppression — galbramc / detail
  319. Relax test time — galbramc / detail
  320. One more use of TRIANGLE — galbramc / detail
  321. Relax one more test timing — galbramc / detail
  322. Update BoostBuild — galbramc / detail
  323. Add polynomial velocity profiles to Coles — galbramc / detail
  324. Some Coles profile fixes — galbramc / detail
  325. Refactor Rotor constraint — galbramc / detail
  326. Fixes for Rotor outputs — galbramc / detail
  327. Forgot a file — galbramc / detail
  328. Fix compile error — galbramc / detail
  329. Missed an output option — galbramc / detail
  330. More rotor output fixes — galbramc / detail
  331. Fix warning — galbramc / detail
  332. Allow no constraints during optimization — galbramc / detail
  333. Add back regular solve during body force optimization — galbramc / detail
  334. Relax timing — galbramc / detail
  335. Fix body force optimization for RANS — galbramc / detail
  336. More verbose error message — galbramc / detail
  337. One more body force optimization fix — galbramc / detail
  338. Update sansLIPAIM for ESP 1.19 — galbramc / detail
  339. Fix Rotort_GlobalConstraint convergence check — galbramc / detail
  340. Fix data transfer — galbramc / detail
  341. Add missing Python GIL protections — galbramc / detail
  342. Some nightly fixes. Better specification for building boost. — galbramc / detail
  343. Add Coloes polynomial pressure profile — galbramc / detail
  344. Add RANS Coles pressure profile. Relax test tolerances. Other small fixes. — galbramc / detail
  345. Remove upper bound check on Coles pressure polynomial — galbramc / detail
  346. Add ProfileDebug_eta_max — galbramc / detail
  347. Another tweak to Coles pressure profile — galbramc / detail
  348. Add polynomial pressure profile to back pressure BC — galbramc / detail
  349. Fix required delta for static back pressure — galbramc / detail
  350. VMSD-BR2 was using the wrong quadrature rule to calculate the non-zero pattern. Jacobian has been updated so that it should use correct (1 point) quadrature for non-zero pattern — blsc / detail
  351. Added logic to JacobianCell_VMSD_BR2 so that the static condensation matrices are not used for the non-zero patter calculation. Under-integration resulted in these matrices being singular. — blsc / detail
  352. Refactor BodyForceSolver — galbramc / detail
  353. Suppress Boost serialization bug for VectorS<M,SurrealS> — galbramc / detail
  354. Add missing include — galbramc / detail
  355. Test syncDOFs_MPI with more complex data types — galbramc / detail
  356. Add missing ifdef — galbramc / detail
  357. Put back distance function calculation — galbramc / detail
  358. Fix BodyForce solver initial condition — galbramc / detail
  359. Exlicitly use SANS::SurrealS with EGADS. Update NormalField test. — galbramc / detail
  360. Take away a toy — galbramc / detail
  361. Intel workaronud... — galbramc / detail
  362. Test the correct Face — galbramc / detail
  363. Fix compile error — galbramc / detail
  364. Warning fixes — galbramc / detail
  365. Finally found the NormalField bug. — galbramc / detail
  366. Fix OutGroup specification for BodyForce Solver — galbramc / detail
  367. Add Optimization option to BodyForce solver. — galbramc / detail
  368. Forgot to update checkInput function. — galbramc / detail
  369. Fix use of incorrect dictionary — galbramc / detail
  370. Fixes for boundary triangle orientation with refine — galbramc / detail
  371. Split trapped edges with refine. Check for all 0 element in distance function. Other small fixes. — galbramc / detail
  372. Forgot to update refineParam::checkInputs — galbramc / detail
  373. Updates to refine interface and print requested complexity with MOESS — galbramc / detail
  374. Use log_eucliean edge length with refine — galbramc / detail
  375. Try to fix suitesparse metis dilemma. Add more g++ and clang++ copmiler versions. — galbramc / detail
  376. gnu 11 fixes — galbramc / detail
  377. Remove -lc++ from clang flags — galbramc / detail
  378. Add missing include — galbramc / detail
  379. Upgrade ccache — galbramc / detail
  380. Fix SANSparallel MMA optimization — galbramc / detail
  381. Cleanup for last commit — galbramc / detail
  382. Removed execute permission for a .cpp file — shunz / detail
  383. Update ccache path — galbramc / detail
  384. Compile fixes for clang-10 — galbramc / detail
  385. Relax tolerance — galbramc / detail
  386. More compile fixes — galbramc / detail
  387. Warning fixes — galbramc / detail
  388. Lots of compile warnings and other fixes — galbramc / detail
  389. Use default functions in MatrixSymS. Increase execution times for coverage. Warning fixes. — galbramc / detail
  390. Fix typo — galbramc / detail
  391. Relax toleranes. Upgrade to AFLR 10.17.5. — galbramc / detail
  392. Use appropriate architecture for AFLR — galbramc / detail
  393. Update AFLR3 and use TRANSP_INT_BL for Body Force boundaries — galbramc / detail
  394. Fix warnings — galbramc / detail
  395. Update finding and checking AFLR — galbramc / detail
  396. Relax execution time — galbramc / detail
  397. Intel is just different... — galbramc / detail
  398. Relax more tolerances and fix indentations — galbramc / detail
  399. More intel relaxation — galbramc / detail
  400. Use system lcov and relax intel tolerance — galbramc / detail
  401. Use xHost instead of xhost so ccache works with Intel — galbramc / detail
  402. Add surface tecplot dump to BodyForce Solver — galbramc / detail
  403. Fix for body force surface outputs — galbramc / detail
  404. Added Pointwise mesh generator — galbramc / detail
  405. Parallel fix and forgot a file — galbramc / detail
  406. Fix Pointwise h calculation. Fix link errors. — galbramc / detail
  407. Small fix to Pointwise glf script — galbramc / detail
  408. Added waligura@mit.edu to DeveloperEmailAddresses — waligura / detail
  409. PDERANSSA2D changes which take out ntref as a variable in the PDERANS function and unit test. The unit test update is not ideal right now since I am still waiting on a way to calculate some terms, but there is a SANS developer exception for the time being. Needed to push it to start building off some new SA varaitions off of it. — waligura / detail
  410. Removing white spaces in PDERANSSA2D — waligura / detail
  411. Add isotropic MOESS optimization option for Pointwise — galbramc / detail
  412. Fixes to PDERANSSA2D and unit test — waligura / detail
  413. Another formatting change — waligura / detail
  414. Try again — waligura / detail
  415. messed up spacing at the end of the file — waligura / detail
  416. Valgrind python suppressions — galbramc / detail
  417. Nightly clang analyzer suppressions — galbramc / detail
  418. Correct volume calculation for Pointwise — galbramc / detail
  419. Pointwise fix for dimensionality — galbramc / detail
  420. changes to sandbox cases with nuref defined — waligura / detail
  421. Fix instantiation — galbramc / detail
  422. Clang compiler fix — galbramc / detail
  423. Relax timing for one test — galbramc / detail
  424. More changes to sandbox cases for nuref deletion update — waligura / detail
  425. Initilizing variables and raising the convergence tolerance — waligura / detail
  426. Just lowering the tolerance a little bit more on the PDERANS unit test to try and get it through Intel. I need to update this later anyway so this may be a temporary fix — waligura / detail
  427. Actually finding that closetol is defined multiple times in this unit test — waligura / detail
  428. Use Python 3.8.10 for valgrind and sanitizer — galbramc / detail
  429. Messing around with the tolerances a little bit more — waligura / detail
  430. Improved linesearch console output. Now when verbosity is on, the linesearch outputs whether a residual is increased (+), decreased (-), or converged (*) at the locations tested. — blsc / detail
  431. Updates to Newton. Neater verbose outputs to console for residual. Tracking nonlinear iterations taken correctly for cases where Newton does not converge. — blsc / detail
  432. Update PDEmitAVSensor2D and PDEmitAVSensor3D to better handle the afld, including system tests to ensure consistency. This required a few changes in the PDEEulermitAVDiffusion classes (more to changes to come with these). Also added a h/p scaling for the 2D sensor viscosity with unit test. — blsc / detail
  433. typo fixes in Pointwise tcl script — allmaras / detail
  434. Removed duplicated class definition in two cpp files, which may have led to unitialized data error reported by valgrind. — shunz / detail
  435. Fix nightly script — galbramc / detail
  436. Another nightly script fix — galbramc / detail
  437. Updates to Euler/NS mainly to improve the custom tecplot output. Updates to artificial diffusion classes to remove the a-field from params, since those should all be handled by the PDESensor classes now. Updates to the custom tecplot output function for RANSSA so we get the SA variable in the domain, and RANSSA fluxes at the boundary. Added PDEEulermitAVDiffusion3D.h to the exclusion list for file size. Updates to boundary conditions mostly to handle the a-field in the params in a cleaner way. — blsc / detail
  438. Renamed analytic functions with array output to hopefully avoid confusion — shunz / detail
  439. Updated PDESourceOnly and unit tests. Required some modification of a few PDEs in the process. — blsc / detail
  440. Updated homotopy continuation algorithm. This involves an update to the constructor, so the relevent sandbox cases have been updated. A few sandbox cases and unit test have been disabled. The unit test will be re-enabled once it has been updated to the new interface (the content is currently lacking anyway). Also added a function to SolverInterface_VMSD_BR2 to return the total (q + qp) fine (p+1 without subtraction) adjoint for output to Tecplot. — blsc / detail
  441. Minor edits — shunz / detail
  442. Add ProjectToQauxi equation class for coupling FP+IBL3 — shunz / detail
  443. Rename VectorFunction3D to ArrayFunction based on new naming convention — shunz / detail
  444. Removed all the cases that were disabled in the sandbox. Re-added the homotopy unit tests (still need more work, but to check basic functionality). Updated advection-diffusion and PDEHomotopy interfaces to support the new unit test. — blsc / detail
  445. Add initial framework for Auxi equation for FP-IBL3 coupling — shunz / detail
  446. Minor cleanup — shunz / detail
  447. Removing some secluded ntref values pointed out by Ben — waligura / detail
  448. add anonymous namespace for safety — shunz / detail
  449. Included all the necessary fields int Auxi equation for FP-IBL3 — shunz / detail
  450. Renamed integrand for projection to Qauxi — shunz / detail
  451. Added the ability to specify parameters for positivity preserving source in Euler. Updated tests to reflect change in constructor. — blsc / detail
  452. I think this will fix the error Jenkins bought up for the Euler with rotor PDE. — blsc / detail
  453. Fix Euler with rotor PDE boundary condition — blsc / detail
  454. Fix Euler with rotor PDE boundary condition -- Surreals could be passed through the PointSequence too. — blsc / detail
  455. Removed unused header from Homotopy.h — blsc / detail
  456. Warning fixes — blsc / detail
  457. More warning fixes for missing override keyword. — blsc / detail
  458. Update to latest avro — galbramc / detail
  459. avro parallel fixes — galbramc / detail
  460. Dissable avro graphics — galbramc / detail
  461. add const qualifier just to be extra cautious — shunz / detail
  462. Initial working prototype of projection to Qauxi without the div.(M) term — shunz / detail
  463. Distinguish volume and manifold quadrature order configurations — shunz / detail
  464. Rename integrand class for clarity — shunz / detail
  465. 4D fixes, and rename Ptope to Pentatope — galbramc / detail
  466. Missed a file — galbramc / detail
  467. Remove file dump — galbramc / detail
  468. Fix warning — galbramc / detail
  469. Add initial API of manifold integrands for Auxi equation — shunz / detail
  470. Put avro WriteConformity back, but does nothing for now — galbramc / detail
  471. add more details to integrand of manifold boundary trace for FP-IBL3 coupling — shunz / detail
  472. More avro parameter fixes — galbramc / detail
  473. Reduce Pentatope mesh size. Fix accidental commit — galbramc / detail
  474. Warning fix — galbramc / detail
  475. rename files/classes for clarity — shunz / detail
  476. add missing include — shunz / detail
  477. [intermediate progress] compiling prototype of manifold boundary trace integrals in auxi equation for FP-IBL3 coupling — shunz / detail
  478. minor edit — shunz / detail
  479. Removed unnecessary destructor — shunz / detail
  480. typo fix — shunz / detail
  481. Access cell group via global indexing instead of local — shunz / detail
  482. Initial working prototype of new Field for Qauxi for FP-IBL3 so that DOFs can be viewed as volume boundary trace and area cell at the same time — shunz / detail
  483. Type-related bugfix in FP PDE — shunz / detail
  484. cleaned up unused method — shunz / detail
  485. Updated VMSDBR2 statically condensed Jacobian calculating to accept multiple RHS to condense using a single Jacobian calculation. Updated linear solvers for globally constrained systems to use this new functionality. Added unit tests to test that results from multiple-RHS code matches applying the single-RHS code to each RHS individually. This update will only affect globally constrained systems (using VMSDBR2). — blsc / detail
  486. Hard coded manifold/surface quad grid that matches z-min boundary group of a box hex grid — shunz / detail
  487. Added comments to BC data field implementation — shunz / detail
  488. Minor typo fix — shunz / detail
  489. Refactored DOF indexing contruction to ensure consistency between volumeb boundary trace field and area cell field — shunz / detail
  490. Rename variable for clarity.  Add exception to guard against misuse of BC data in full potential wall transpiration BC — shunz / detail
  491. Start a new case of FP-IBL3 coupling by copying from existing FP-only case. — shunz / detail
  492. Fixed clang warnings. Fixed abstract class error due to not implementing static condensation update to MKL. Have added a developer exception so the execution path exists, but extension still not implemented for MKL. — blsc / detail
  493. Refactored AES Project to Qauxi for flat plate 3D panel so that it's ready to be generalized for 3D FP coupling as well — shunz / detail
  494. Removed a deprecated header file — shunz / detail
  495. Add partial specialization to support block 4x4 FP+IBL3 coupling — shunz / detail
  496. Fixed missing BC parameter checks — shunz / detail
  497. Fixed long line formatting — shunz / detail
  498. Fixed more intel warnings. Added unit tests for the multi-RHS logic for UMFPack and MKL. The MKL test ensures that a developer excpetion occurs, since the logic for MKL has not been implemented. Moved the sum-constrained algebraic equation set in to its own file (like the Advection and Heat equation sets). — blsc / detail
  499. minor cleanup — shunz / detail
  500. Add static data member to identify the size of jacobian (i.e. number of equations and variables) — shunz / detail
  501. Add unit test for block 4x4 system of FP-IBL3 coupling. Still a working progress, but test compiles and runs — shunz / detail
  502. Fixed more intel warnings. Added unit tests for the multi-RHS logic for FMGRES. The FGMRES test ensures that a developer excpetion occurs, since the logic for MKL has not been implemented. — blsc / detail
  503. Completed Auxi equation for FP-IBL3 coupling — shunz / detail
  504. Fix a bug in block 3x3 and 4x4 system of equations: MatrixSize().  It has been identified because perviously block (2,1) is decoupled/zero for previous test cases — shunz / detail
  505. Refactor jacobian ping test screen output for clarity — shunz / detail
  506. Refactor JacobianParam to allow for multiple parameters of different dimension, e.g. for Auxi equation of FP-IBL3 coupling — shunz / detail
  507. Pass block 4x4 block algebraic equation set unit test without coupling for FP and Auxv equations — shunz / detail
  508. add const qualifiers — shunz / detail
  509. Add annotation to AES_Auxi — shunz / detail
  510. Remove redundant class template arguments — shunz / detail
  511. Remove AGLS. Add blockage and viscous terms to RotorSource. — galbramc / detail
  512. Missed a file — galbramc / detail
  513. Refator AES_auxv mass matrix jacobian computation for clarity and simplicity — shunz / detail
  514. BC fixes — galbramc / detail
  515. Fix include — galbramc / detail
  516. More boundary condition cleanup — galbramc / detail
  517. Relax tolerance — galbramc / detail
  518. Warning fix — galbramc / detail
  519. Auxi parameter jacobian is now compiling. — shunz / detail
  520. Rename class and file — shunz / detail
  521. Added functionality to project from a DG to a CG field defined on the same x-field. — blsc / detail
  522. Remove infinite x-dervative for thickenss. Fix warnings. — galbramc / detail
  523. DG ot CG prjection now uses explicit instantiation. — blsc / detail
  524. Simplify jacobian calculation of Auxi equation as it's simply mass matrix for Galerkin projection — shunz / detail
  525. Add a specialized IntegrateCellGroups method for reuse in FP-IBL3 coupling implementation — shunz / detail
  526. More strict templates for AV. Add strongFluxViscous to AV. — galbramc / detail
  527. modified (solution error)^2 to use dot product; now allows general ArrayQ<T> solution — allmaras / detail
  528. Warning fixes — galbramc / detail
  529. Fix for older cmake versions — galbramc / detail
  530. Replace max with smoothRamp_tanh2 for artificial viscosity — galbramc / detail
  531. Some more tests — galbramc / detail
  532. Fix smoothRamp_tanh2. Fix ThicknessNACA6 to use fabs instead of abs. — galbramc / detail
  533. Suppress compiler warning — galbramc / detail
  534. Fix warning and relax tolerance — galbramc / detail
  535. Enable viscous body forces for Euler — galbramc / detail
  536. Completed Auxv_Qinv jacobian — shunz / detail
  537. Added a test to check that bubble modes were not present in VMSD after static condenstaion for a partial Newton step. — blsc / detail
  538. Vera exclusion needed for new unit test (L006). — blsc / detail
  539. Added parallel test for homotopy, found bug in parallel, fixed bug in parallel. — blsc / detail
  540. Discrete blockage gradient — galbramc / detail
  541. Forgot a file — galbramc / detail
  542. Added an example homotopy adapt in 3D with RANS, and some missing function calls. — blsc / detail
  543. Vera fix — galbramc / detail
  544. Fix compile error — galbramc / detail
  545. Added HiFW Joukowski case using homotopy (still WIP). Updates to artificial viscosity interface to resolve some template mis-matches during Joukowski case set up. — blsc / detail
  546. Add annotations — shunz / detail
  547. Another compile fix — galbramc / detail
  548. Another compile fix — galbramc / detail
  549. Fixed error in PETSc Dicts. — blsc / detail
  550. Relax tolerance. Add PETScInit. Suppress warning. — galbramc / detail
  551. More warning fixes — galbramc / detail
  552. PDERANS3D fixes — galbramc / detail
  553. Fixes for AVSensor_Source_VMSD_SPD — galbramc / detail
  554. Fix ping test — galbramc / detail
  555. Change git update alias — galbramc / detail
  556. Fix sensitvity calculation — galbramc / detail
  557. Don't require name for camber free parameters — galbramc / detail
  558. Implement BCNone for VMSD BR2. I hope nobody has been using it... — galbramc / detail
  559. Completed d(FP)/d(Qauxi) coupling jacobian for FP-IBL — shunz / detail
  560. Forgot to commit unit test on d(FP)/d(Qauxi) jacobian — shunz / detail
  561. Removed redundant files for discarded Auxi and Auxv equation implementation — shunz / detail
  562. Removed more discarded implementation for Auxi (in FP-IBL3) — shunz / detail
  563. Add linear algebra instantiations for FP-IBL3 — shunz / detail
  564. Refactoring to keep up with JacobianParam's updated template arguments — shunz / detail
  565. Fixed formatting — shunz / detail
  566. Minor refactoring — shunz / detail
  567. Add unit test for box grid and its derived boundary manifold grid — shunz / detail
  568. Minor cleanup — shunz / detail
  569. Add more unit test — shunz / detail
  570. Add unit test for FieldVolume_DG_BoundaryTrace_matchAreaCell — shunz / detail
  571. Bug fix: previously, allocated memory for dynamic matrix but didn't initialize to zero — shunz / detail
  572. Completed 4x4 block system jacobian ping test for FP-IBL3 coupling — shunz / detail
  573. Added Tt output for Rotor — galbramc / detail
  574. added instantiations for Newton solution of FP-IBL3 equations — shunz / detail
  575. Solved first FP-IBL3 case with Newton solver — shunz / detail
  576. added instantiations for MKL and PETSc for FP-IBL3 — shunz / detail
  577. added implementation for PETSc for FP-IBL3 — shunz / detail
  578. modularized S-shaped duct grid points generation — shunz / detail
  579. debugging (for sporadically slow FP residual/jacobian) and refactoring FP-IBL3 test case — shunz / detail
  580. mod: VectorFunction -> ArrayFunction — allmaras / detail
  581. inviscid Joukowski with interface to Pointwise — allmaras / detail
  582. Added more profiling info for debugging FP-IBL3 — shunz / detail
  583. added verbose printout for debugging — shunz / detail
  584. fixed formatting errors — shunz / detail
  585. Fix Tt rotor output — galbramc / detail
  586. fixed lines that were too long — allmaras / detail
  587. fixed promote_Surreal bug (only showed up for USE_GRID_LAPLACIAN) — allmaras / detail
  588. Vector -> Array fix to be consistent with new Array*Function nomenclature — allmaras / detail
  589. added Array2Function2D class (2-component, each an analytic function) with unit test; — allmaras / detail
  590. added PyDict options for xz and yz angle offsets for 3D corner singularity — allmaras / detail
  591. Fixes for running Joukowski with avro and refine — galbramc / detail
  592. Fixes for triangle — galbramc / detail
  593. Fix for triangle with holes — galbramc / detail
  594. some cleanup on full potential PDE — shunz / detail
  595. refactored and added to residualDecreaseStatus(.) — shunz / detail
  596. fixed over-array-bound access — shunz / detail
  597. switched assertions from runtime to compile time — shunz / detail
  598. refactored FP-IBL3 S-duct test case — shunz / detail
  599. forgot to commit this... refactored linear solution checker — shunz / detail
  600. removed redundant partial specialization in AES_PTC — shunz / detail
  601. annotated PTC implementation of paramfld_ and paramfldpast_ — shunz / detail
  602. beautified Newton iteration printout — shunz / detail
  603. refactored an MatrixS constructor — shunz / detail
  604. added comments — shunz / detail
  605. enabled PTC for FP-IBL3 4x4 coupling — shunz / detail
  606. fixed FP and IBL side wall BC — shunz / detail
  607. refactored std::vector access to use bound checking — shunz / detail
  608. added comments on how/why CFL changes in PTC iterations — shunz / detail
  609. refactored PTC printout & dump — shunz / detail
  610. minor tweak to test case — shunz / detail
  611. Refactored S-duct box grid — shunz / detail
  612. Cleaned up 3D FP BC — shunz / detail
  613. some cleanup — shunz / detail
  614. added commented out code for timing — shunz / detail
  615. fixed warnings — shunz / detail
  616. added sanity check.  some cleanup — shunz / detail
  617. changed IBL3 surface normal orientation convention to be compatible with FP-IBL3 coupling — shunz / detail
  618. Refactored projection onto Qauxv to be only in-surface velocity components in FP-IBL3 coupling — shunz / detail
  619. added assertion to guard against misuse — shunz / detail
  620. Consolidated auxi equation implementation for 3D full potential and panel — shunz / detail
  621. minor cleanup — shunz / detail
  622. Merged ProjectToQauxi3D implementation for panel and FP coupling with IBL3 — shunz / detail
  623. more cleanup on include — shunz / detail
  624. Cleaned up and merged interior trace integrand for IBL3 and Auxi.  Renamed files — shunz / detail
  625. added missing include that was accidentally removed — shunz / detail
  626. cleaned up include related to 2D/3D manifold cell integrands — shunz / detail
  627. more cleanup of include — shunz / detail
  628. Cleaned up panel+IBL3 case — shunz / detail
  629. added option in IBL3 to choose how nrm_surf orientation relates to e1 and e2 — shunz / detail
  630. minor test case cleanup/tweaks — shunz / detail
  631. turned off (1) LF flux, (2) mass correction to flux and (3) amp+lag equations for IBL3 — shunz / detail
  632. fixed style — shunz / detail
  633. refactored param tuple type for better consistency between indexing, ParamTuple and FieldTuple — shunz / detail
  634. renamed parameter field type — shunz / detail
  635. refactored parameter type for IBL3 — shunz / detail
  636. refactored JacobianParam class since the previous implementation is quite limiting — shunz / detail
  637. updated JacobianParam usage in test cases following its refactoring — shunz / detail
  638. more cleanup on JacobianParam usage — shunz / detail
  639. updated use cases involving Auxi equation in panel+IBL3. deleted sandbox cases that are not worth maintaining — shunz / detail
  640. updated use cases of new PDEIBL3FourEqn API — shunz / detail
  641. fixed full potential unit tests — shunz / detail
  642. fixed a bug/typo: flipped divM and divM_rhoe flux calculation for Auxi. Fortunately, the effect on current test cases is minimal since they are incompressible flows — shunz / detail
  643. fixed IBL unit tests — shunz / detail
  644. minor cleanup of 3D IBL PDE and associated block jacobian ping test — shunz / detail
  645. Removed the dedicated (yet redundant) boundary trace integrand for 3D auxi; instead, use 3D manifold BCNone integrand.  Renamed 2D/3D BCNone integrands to reflect its general purpose, not limited to IBL PDE — shunz / detail
  646. refactored/fixed Surreal type definitions to use proper/general size variable — shunz / detail
  647. accidentally forgot these pieces two commits earlier, when updating auxi BCNone integrand — shunz / detail
  648. fixed some compile errors for auxi equation and boundary integrand — shunz / detail
  649. minor integrand cleanup — shunz / detail
  650. refactored auxi equation's cell integrand to be PhysDim-agnostic, in prep for generalization of auxi aes class — shunz / detail
  651. Renamed auxi aes class to be not 3D specific, in prep for generalization — shunz / detail
  652. Refactored BCNone integrand for Galerkin manifold to be agnostic of PhysDim — shunz / detail
  653. fixed/refactored a few Galerkin_manifold boundary integands to be agnostic of PhysDim — shunz / detail
  654. Use isotropic implied metric for IsotropicOpt MOESS — galbramc / detail
  655. refactored Galerkin_manifold interior trace integrands to be agnostic of PhysDim — shunz / detail
  656. removed daisy chain in JacobianParam since it could be handled by the primary algebraic equation class's jacobianParam(...) — shunz / detail
  657. removed 3D-specific assertion — shunz / detail
  658. refactored usage of jacobianParam(...) to account for any daisy chain in the primary algebraic equation set — shunz / detail
  659. Refactored daisy-chain/linked list implementation of algebraic equation sets, including auxi equation and proper chained calls to jacobianParam() — shunz / detail
  660. removed redundant daisy-chained calls to setSolutionField() and fillSystemVector() in algebraic equation sets.  Clarified the intended use case of daisy-chained equation set — shunz / detail
  661. Refactored 2D auxi PDE class to prepare panel-IBL2 to use the PhysDim-agnostic auxi equation implementation.  Removed redundant auxi equation set and integrand classes that used to be specialized for Panel2D — shunz / detail
  662. Removed 3D-specific assertion in auxi cell integrand. Fixed IBL2 captured transition system test case — shunz / detail
  663. Cleaned up auxi equation implementation to remove redundant dummy members in FunctionEval class.  Renamed some files & classes — shunz / detail
  664. cannot assign a regular/raw pointer to std::shared_ptr — shunz / detail
  665. Cleaned up 2D auxv equation implementation for XfoilPanel+IBL to remove redundant dummy members in FunctionEval class.  Renamed some files & classes — shunz / detail
  666. cannot assign regular/raw pointer to std::shared_ptr — shunz / detail
  667. Cleaned up 3D auxv equation implementation for flat plate panel+IBL3 to remove redundant dummy members in FunctionEval class — shunz / detail
  668. minor refactoring of XfoilPanel field discretization order checks/assertions — shunz / detail
  669. refactoring (similar to previous ones) to have PDEIBL2D define its parameter field tuple types — shunz / detail
  670. typo fix — shunz / detail
  671. only prints in verbose mode — shunz / detail
  672. fixed system/CodeConsistency tests for IBL — shunz / detail
  673. cleanup and fixes to keep IBL-related implementation up to date — shunz / detail
  674. more cleanup on DG/HDG discretization unit tests, mostly related to IBL — shunz / detail
  675. cleanup & fixes to panel-IBL3 3x3 block discretization unit tests to keep up to date with IBL-related implementation — shunz / detail
  676. removed redundant include — shunz / detail
  677. fixed miscellaneous XfoilPanel+IBL2 aes unit tests to stay up to date with latest IBL implementation — shunz / detail
  678. cleaned up & fixed sandbox cases for XfoilPanel+IBL2D single run and drag polar for airfoil — shunz / detail
  679. miscellanenous fixes of compile error and formatting style — shunz / detail
  680. removed uses of gradqn and q in Neumann and Dirichlet BCs respectively for potential flow — shunz / detail
  681. fixed some compile errors and formatting style — shunz / detail
  682. updated pyrite check files for IBLFourEqn3D to use LF flux without mass correction — shunz / detail
  683. fixed miscellaneous unit tests related to coupled IBL — shunz / detail
  684. fixed FP-IBL3 jacobian ping test — shunz / detail
  685. fixed a few compile errors and warnings related to a few sandbox test cases not up-to-date with latest FullPotential PDE/BC implementation — shunz / detail
  686. renamed class & files. re-org include.  started a LIP+IBL3 sandbox case by copying over FP-IBL3 — shunz / detail
  687. allows FP-IBL3 jacobian ping test to run longer on Jenkins — shunz / detail
  688. fixed unit test of auxv aes for 3D full potential — shunz / detail
  689. Reverted some changes in the use of LIP BCs.  These changes should NOT have been made — shunz / detail
  690. relocated a unit test to IBL folder — shunz / detail
  691. passed a few ping tests related to coupled IBL3 — shunz / detail
  692. fixed two unit tests troubled by misuse of MPI communicator — shunz / detail
  693. refactored some explicit instantiations for better generality and less tedious code — shunz / detail
  694. use MatrixS_or_T instead of MatrixS to account for the case of MatrixQ=Real — shunz / detail
  695. relaxed time limit for a block jacobian ping test on Jenkins.  trying to fix an undefined reference error by altering the order of loading lib in CMakeLists — shunz / detail
  696. rename/reorg files/classes to remove FullPotential 3D specificity from Auxv equation implementation — shunz / detail
  697. Relocated Matrix PDE_Qauxi typedef into PDE class in lieu of integrand class — shunz / detail
  698. Looks like Jenkins censored the previous commit msg cuz it contains the word 'e-r-r-o-r'. Amend the commit msg now. relaxed time limit for a block jacobian ping test on Jenkins.  trying to fix an undefined reference e-r-r-o-r by altering the order of loading lib in CMakeLists — shunz / detail
  699. make a method protected as it is not a necessary API for mitLG BC — shunz / detail
  700. Add comments.  Make basis functions class members to reduce re-allocating memory during operator calls — shunz / detail
  701. Refactored LIP PDE to prep it to be run with coupled IBL3.  Added Dirichlet_mitLG BC for LIP — shunz / detail
  702. relaxed machine precision level tolerance in a unit test for intel compiler to pass — shunz / detail
  703. Replaced tedious & repetitive block matrix instantiation statements with macro definitions. Added explicit instantiations for MatrixBlock_4x4 for LIP-IBL3 coupling — shunz / detail
  704. Replaced tedious & repetitive block matrix instantiation statements with macro definitions. Added explicit instantiations for MatrixBlock_4x4 for LIP-IBL3 coupling — shunz / detail
  705. fixed some lingering merge conflicts — shunz / detail
  706. fix no-return warnings in a function with non-void return type — shunz / detail
  707. refactored miscellaneous unit tests. added missing explicit instantiation for 4x4 block matrix — shunz / detail
  708. added option of Dirichlet_mitLG for LIP test --> result matches LinearScalar_sansLG, so not need bother with mitLG — shunz / detail
  709. fix missing return statement issue — shunz / detail
  710. minor cleanup — shunz / detail
  711. add state validity check assertions for Auxv projection integrand class — shunz / detail
  712. refactored LIP BC and PDE to enable coupled LIP-IBL3 test case to run — shunz / detail
  713. simply renamed some variables for brevity — shunz / detail
  714. speed up LIP-IBL3 run by initializing with Falkner-Skan solution and solving IBL3 in uncoupled mode — shunz / detail
  715. make IBL3 LF vs Full upwind flux choice a runtime decision — shunz / detail
  716. fix typos that caused compile errors — shunz / detail
  717. add unit tests to 4-equation 3D IBL PDE — shunz / detail
  718. add explicit instantiation — shunz / detail
  719. set minimum IBL output field order to be 1 — shunz / detail
  720. add/refactor explicit instantiations — shunz / detail
  721. fixed issues with uninitialized data in boundary integand, which became a problem due to recent refactoring to 3D LIP BC (i.e. swtich from assignment to cumulation in data(...)).  Some other fixes to compile warnings — shunz / detail
  722. Implementing N wave problem for Burgers using Advection Diffusion — cwomack / detail
  723. Removed one variable. — cwomack / detail
  724. Tried a few more duct geometries for IBL3 — shunz / detail
  725. fix for messed up merge conflict — allmaras / detail
  726. fix typo in comments — shunz / detail
  727. fix for messed up merge conflict — allmaras / detail
  728. Added Darmofal changes to Nwave code. — cwomack / detail
  729. added checks on SANS_AVRO and SANS_REFINE — allmaras / detail
  730. More changes — cwomack / detail
  731. Changed OutputNDConvert to match Dave's — cwomack / detail
  732. add a manifold (area) grid based on four sides of a box that form a ring — shunz / detail
  733. Added deanna.sewell@colorado.edu to DeveloperEmailAddresses — deanna.sewell / detail
  734. add to unit tests of BoxBoundaries grid (duct ring) — shunz / detail
  735. reverted OutputCell_SolutionErrorSquared to its former functionality (input is Real/VectorS, — allmaras / detail
  736. Added mitStateSpaceTime BC for 1D Advection Diffusion — cwomack / detail
  737. sans-Lagrange adiabatic & isothermal no-slip BCs for NS — allmaras / detail
  738. relaxed tolerance on unit test — allmaras / detail
  739. modified speedCharacteristic for AD with zero advective flux — allmaras / detail
  740. refactoring of BoxBoundary grid: group indexing and area_cell to volume_boundary mapping — shunz / detail
  741. add a test case of LIP-IBL3 for IBL3 on a duct ring (i.e. 4 side walls of a box) — shunz / detail
  742. added sans-Lagrange no-slip BC types to 2D NS — allmaras / detail
  743. MatrixS_MatMul instantiations needed for sans-Lagrange no-slip BCs for NS — allmaras / detail
  744. Explicitly only use one OpenMP thread for PETSc with MPI — galbramc / detail
  745. mat-mul needed for sans-Lagrange no-slip BCs for NS — allmaras / detail
  746. minor refactoring — shunz / detail
  747. added IO files for sans-Lagrange no-slip BCs for NS — allmaras / detail
  748. playing with laminar and turbulent cases for LIP+IBL3 — shunz / detail
  749. minor cleanup — shunz / detail
  750. Turned off full jacobian ping test for 3-eq IBL Quad.  Also some minor clean. — shunz / detail
  751. Correction to last commit message: should be "Turned ON full test" — shunz / detail
  752. changes to HDG FieldWeighted integral for sans-Lagrange no-slip BCs for NS; note — allmaras / detail
  753. Added deltaRef for body force viscous terms — galbramc / detail
  754. some cleanup on panel-IBL3 sandbox case — shunz / detail
  755. Add missing includes — galbramc / detail
  756. Forgot a file — galbramc / detail
  757. Separate constant and quadratic body force viscous terms — galbramc / detail
  758. fixed compile error and warning — shunz / detail
  759. Turned on full jacobian ping test for coupled panel+IBL3 (3-eq) — shunz / detail
  760. Turned on more jacobian ping test — shunz / detail
  761. Fix link error — galbramc / detail
  762. Fix Newton iteration separator — galbramc / detail
  763. Update unit test — galbramc / detail
  764. refactored panel-IBL3 case running setup — shunz / detail
  765. Output IBL results of mass defect flux in lieu of dummy output of qz_X — shunz / detail
  766. bug fix: consistent definition of w and b fields in FieldWeighted — allmaras / detail
  767. Refactored sandbox case setup: panel-IBL3, LIP-IBL3 — shunz / detail
  768. Forgot to suppress one output — galbramc / detail
  769. Return results from Constrained body force solver — galbramc / detail
  770. fix style — shunz / detail
  771. refactor and unit test Auxv equation for 3D flate plate panel — shunz / detail
  772. minor cleanup — shunz / detail
  773. Refactor Auxv equation of 3D flat plate panel method to allow for CG p1 qauxvfld for better DOF efficiency — shunz / detail
  774. Fix bug in deltaRef reduction process — galbramc / detail
  775. fix warning messages — allmaras / detail
  776. minor cleanup — shunz / detail
  777. bug fix: 3D panel method with triangle panels was computing panel area wrongly by double-multiplying reference area.  Added unit tests for this panel method — shunz / detail
  778. fix compile errors caused by typos and lag behind previous  refactoring — shunz / detail
  779. fix style for Vera check — shunz / detail
  780. minor cleanup of sandbox case — shunz / detail
  781. more warning messages — allmaras / detail
  782. fix warnings: comparing int and size_t in for loop — shunz / detail
  783. relaxed tolerance for intel — shunz / detail
  784. fix duplicated BOOST test suite names — shunz / detail
  785. Allow for no-wall distance functions — galbramc / detail
  786. Support 3D Q2 meshes with libMeshb — galbramc / detail
  787. changed full upwind back to using momentum flux correction by default — shunz / detail
  788. Fix warning — galbramc / detail
  789. More changes to get Nwave boom propagation working — cwomack / detail
  790. Redid unit test for nwave — cwomack / detail
  791. Use KSPGMRESModifiedGramSchmidtOrthogonalization which is slower but more stable — galbramc / detail
  792. Format fix — galbramc / detail
  793. Relax tolerance — galbramc / detail
  794. fixed undefined symbol/linking errors.  static const member needs to be define in cpp, strictly speaking.  clang compiler was rigorous enough to catch this, although gnu lets it pass... — shunz / detail
  795. fixed compile warnings about comparing int and unsigned int — shunz / detail
  796. First attempt at extracting Profile Loss for body forces — galbramc / detail
  797. add unit tests for better coverage — shunz / detail
  798. Forgot to update checkInputs — galbramc / detail
  799. More profile loss fixes — galbramc / detail
  800. Use Yuankang Chen data fit value for body force delta**2 term — galbramc / detail
  801. Fixes for profile loss — galbramc / detail
  802. Cppcheck suppressions and Profile loss computed at constant radius — galbramc / detail
  803. One more try at profile loss — galbramc / detail
  804. just renaming — shunz / detail
  805. Start removing perturbed stuff — galbramc / detail
  806. cppcheck fix and suppression — galbramc / detail
  807. clang analyzer fixes — galbramc / detail
  808. Fix cppcheck suppression — galbramc / detail
  809. add derivative calculation for IBL3 laminar eigen-analysis — shunz / detail
  810. More cppcheck fixes — galbramc / detail
  811. More body force output functionals — galbramc / detail
  812. switched to constant density gas model for IBL — shunz / detail
  813. Remove lienar VMSD and perturbed functions — galbramc / detail
  814. Relax tolerance — galbramc / detail
  815. added sansBOOM PDE directories; added standard atmosphere — allmaras / detail
  816. Remove _NL VMSD suffix — galbramc / detail
  817. Relax timing — galbramc / detail
  818. fixed vera squawk — allmaras / detail
  819. refactoring to to keep up with the constant-density gas model in IBL3 — shunz / detail
  820. Enable output functionals on BodyForce LE/TE surfaces — galbramc / detail
  821. Fix body force relative output functionals — galbramc / detail
  822. Relax tolerance — galbramc / detail
  823. Realxer tolerance — galbramc / detail
  824. more refactoring to to keep up with the constant-density gas model in IBL3 — shunz / detail
  825. Turbulence model constructor and unit test formatting changes. Functional SA-Catris models and framework for SA-LRe and SA-R models as well. — waligura / detail
  826. minor compile error/warning fix — shunz / detail
  827. Pulling in updates for the asymptotically consistent error estimate in VMSD. PDEs have gained an additional typedef, the type of the consistent part of the PDE. This is just the PDEs type for almost all PDEs. New PDE types have been added for using the asymptotic consistency correction for Euler/NS/RANSSA with sensor based artificial diffusion (the originals have been retained for the time being). Updates to the problem interface and the error estimation classes for VMSDBR2 have also been made. Using the asymptotically consistent correction requires some additional data, but the interface for problems not needing that functionality are unchanged. — blsc / detail
  828. updated pyrite files — shunz / detail
  829. Cleaned up AVSensor_Source2D.h a little bit to remove some unused code. — blsc / detail
  830. Missed vera warning — blsc / detail
  831. Forgot to turn off verbose and file output — shunz / detail
  832. Missed another vera warning — blsc / detail
  833. relaxed tolerance — shunz / detail
  834. Fix so 2D avro works for wirebody — galbramc / detail
  835. Added a N-S case of laminar BL — shunz / detail
  836. Fixed the remaining clang and gnu11 compiler warnings. — blsc / detail
  837. cleaned up NS laminar BL sandbox case — shunz / detail
  838. Separated findElement() function into a dedicated file — shunz / detail
  839. Refactored findTraceElement to use simple bounding box check without resorting to the kd-tree hammer...  Added unit test — shunz / detail
  840. Refactor Homotopy so it can be used with any PDE — galbramc / detail
  841. Fix warnings — galbramc / detail
  842. Expose Viscous body force coefficients as user inputs — galbramc / detail
  843. Nightly fixes — galbramc / detail
  844. Added BL profile extraction capability to a NS sandbox case — shunz / detail
  845. Refactored 3D Tet flat plate grid.  Added mutable access to AES in solver interface (but only able to use it by commenting out exception).  More refactoring to NS laminar BL sandbox case — shunz / detail
  846. minor cleanup of sandbox case — shunz / detail
  847. fixed warnings: size_t vs int — shunz / detail
  848. turned off projection between different grids when doing solution sequencing because it does not work due to (probably) a bug... — shunz / detail
  849. Fix mistake in body force — galbramc / detail
  850. Change some QCR variable types in PDERANS and other formatting changes for successful make check. Updated PDERANS and b_test to be consistent with current changes on develop — waligura / detail
  851. fixed warnings: size_t vs int — shunz / detail
  852. bug fix in user input — shunz / detail
  853. fixed style. minor tweak in PETSc setup in a test case — shunz / detail
  854. Refactored grid and test case for NS LamiBL — shunz / detail
  855. Changes to diffusionViscous and diffusionViscousGradient unit tests to check Catris variations. Still working on the formatting but will push this version for now — waligura / detail
  856. Pushing again with vera changes. Something seems to be up with my vera check — waligura / detail
  857. Another vera message I did not see before sending — waligura / detail
  858. Relaxed convergence tolerance in a test case — shunz / detail
  859. Further formatting changes to PDERANS and another vera error I missed initially — waligura / detail
  860. Further formatting changes fixing most of the alignment issues and getting rid of the -= — waligura / detail
  861. Refactored BL sampling function in NS LamiBL test case — shunz / detail
  862. Add ddelta dump for RotorSource — galbramc / detail
  863. Fix warning — galbramc / detail
  864. Working Changes: Finalized AD Burgers test case for boom propagation — cwomack / detail
  865. Small cleanup — galbramc / detail
  866. Remove output_grm — galbramc / detail
  867. Wording changes to SATurbModel and shortening of nonc variables — waligura / detail
  868. Fixed long line.  Separated functions into a cpp file — shunz / detail
  869. Fixed compile and linker errors in findTraceElement(...) — shunz / detail
  870. Added support for S-shaped duct geomerty in flat plate grid in 3D — shunz / detail
  871. adding in the first go at untest SA_R and SA_LRe modifications for 2D. Also making sure all pushes are going through before moving on. — waligura / detail
  872. fixed file I/O mode — shunz / detail
  873. added check for file I/O — shunz / detail
  874. Added a sin duct geometry for IBL3 sandbox case — shunz / detail
  875. Initial commit of sansBOOM PDE implementation with the advective and viscous terms defined — darmofal / detail
  876. refactored Flux_mitState BC implementation for IBL3 to use fluxNormal() instead of evaluating it in the integrand class — shunz / detail
  877. Minor fixes for artificial viscosity — galbramc / detail
  878. Turned on mitLG Dirichlet BC for LIP-IBL3 case at inlet.  Fixed buggy isValidState check that checks uninialized boundary state qB — shunz / detail
  879. Initial implementation of sansBOOM BCs and Adapt2D_DGBR2_sansBOOM_toy — darmofal / detail
  880. Forgot to commit a few lines — shunz / detail
  881. Some more edits to sansBOOM PDE/BC implementation — darmofal / detail
  882. Changed default xtr parameter in IBL transition model from max Real (causing floating point overflow error) to 1e5 — shunz / detail
  883. Fixed (1) division by zero in cut-cell natural transition and (2) unit test for default xtr value — shunz / detail
  884. Still not compiling.  Pushing to allow Marshall to look at N=1 issue — darmofal / detail
  885. Initializing a variable in jacobianFluxViscous correctly — waligura / detail
  886. Allow PDE to use ArrayQ = VectorS<1,T> — galbramc / detail
  887. Homotopy dict fixes — galbramc / detail
  888. Final changes to LocalLaxFriedrichs1D flux function and AD Burgers toy — cwomack / detail
  889. Remove GLPK — galbramc / detail
  890. Missed one — galbramc / detail
  891. Pushing current version of sansBOOM to repo — darmofal / detail
  892. Enable 3D sourcePositivity for NS and RANSSA — galbramc / detail
  893. Most recent mods to sansBOOM implementation — darmofal / detail
  894. Removed changes to Lagrange Triangle — cwomack / detail
  895. Fix compile error — galbramc / detail
  896. Fixed Robin boundary condition for Euler/NS/RANSSA with sensor equation. Updated unit tests to reflect fix. — blsc / detail
  897. Compile fixes — galbramc / detail
  898. Another compile fix — galbramc / detail
  899. Corrected Vera errors — cwomack / detail
  900. More compile fixes — galbramc / detail
  901. Fix consistency test — galbramc / detail
  902. Modified Discretization unit tests to be consistent with linesearch — cwomack / detail
  903. Removed unused variable and changed abs -> fabs — cwomack / detail
  904. Fix parallel HField calculations. Fix couchmanMatrix for RANS. Cleanup Homotopy. Add the abilty to only get possessed DOF even for Statically Condensed systems. — galbramc / detail
  905. Fix compile errors — galbramc / detail
  906. Added updated VMSDBR2 projection. Default is off. To turn on define USE_FULLSPACE_PRJECTION_METHOD_2 at the top of your sandbox case. — blsc / detail
  907. sansBOOM PDE, BC, Output implementation for DGBR2 with advection and diffusion terms — darmofal / detail
  908. Adding two generalized cases to the sandbox to deal with gaps in avro use and SA RANS for adiabatic and isothermal flows. Will be good to keep these consistent with future homotopy and RANS changes — waligura / detail
  909. Removing flatplate xfld mesh option — waligura / detail
  910. removing xfield definition in supersonic case too — waligura / detail
  911. Fixed some missing instantiations needed for sansBOOM — darmofal / detail
  912. A couple more instantiations added... this time because the intel compiler was complaining (though the other compilers were fine... ARGH) — darmofal / detail
  913. Adjusting slightly tolerance on unit tests — darmofal / detail
  914. Updates to BDF time marching to allow ramping of integration order to provide the needed order-dependent past data — deanna.sewell / detail
  915. Modified line search test and removed residual dat file — cwomack / detail
  916. Cleanup BCmitAVsensor — galbramc / detail
  917. Forgot new files — galbramc / detail
  918. Allow Homotopy to use pre-defined BCVectors — galbramc / detail
  919. Make AVSensor_Source_VMSD_SPD consistent between 2D and 3D — galbramc / detail
  920. Fix compile errors — galbramc / detail
  921. vera fix — galbramc / detail
  922. Fix test for parallel — galbramc / detail
  923. Cleanup file dump — galbramc / detail
  924. Use Metric to compute HField_DG instead of size/perimiter — galbramc / detail
  925. Add ResidualNorm_InvJac_DOF_Weighted to VMSDBR2 — galbramc / detail
  926. Revert last change — galbramc / detail
  927. Fix compile error, and more verbose assertion — galbramc / detail
  928. Update unit tests — galbramc / detail
  929. Another unit test update — galbramc / detail
  930. Add ImpliedMetric for Line 2D element. — galbramc / detail
  931. Fix unit test — galbramc / detail
  932. Use SANS_CHECK_CLOSE — galbramc / detail
  933. Remove Burgers PDE — galbramc / detail
  934. Add dict function to DictKeyPair — galbramc / detail
  935. Added Axisymmetric DBL scalar function in 2D with unit tests — cwomack / detail
  936. Added vera exclusion for ScalarFunction2D — cwomack / detail
  937. Updates to sansBOOM including improved IC implementation including ability to read nearfield from a file and also more unit tests — darmofal / detail
  938. Compressible mechanical power calculation — galbramc / detail
  939. Missing a newline at end of ICsansBOOM.cpp.  Fixed. — darmofal / detail
  940. Added Axisymmetric flux functions + unit tests — cwomack / detail
  941. Missing a return statement — darmofal / detail
  942. Found sign error in upwind flux in sansBOOM. — darmofal / detail
  943. Fix compile error and warnings from new clang on macOS — galbramc / detail
  944. Relax tolerance — galbramc / detail
  945. Another warning fix — galbramc / detail
  946. A few more warning fixes — galbramc / detail
  947. More warning fixes for new clang — galbramc / detail
  948. One more warning fix — galbramc / detail
  949. Remove boost libary from external and add it to gitignore — galbramc / detail
  950. More cleanup — galbramc / detail
  951. Mechanical power correction — galbramc / detail
  952. Another mechanical power correction — galbramc / detail
  953. Remove Sensor template from AVSensor_Source3D_PressureGrad — galbramc / detail
  954. Fix compile error — galbramc / detail
  955. Return delta's for both LE and TE edges for BodyForces — galbramc / detail
  956. Add Deviation Angle Square output function for Body Forces — galbramc / detail
  957. Missing include — galbramc / detail
  958. More compile fixes — galbramc / detail
  959. Fix compile warnings — galbramc / detail
  960. Revert MechanicalPower calculation. Fix InteriorTrace partitioning for JacobianFunctionalInteriorTrace. Fixes for body force optimization. — galbramc / detail
  961. Use consistent limited gradients in PrimitiveSurrogate_btest — galbramc / detail
  962. Fix warnings — galbramc / detail
  963. Verbose output for computing BodyForce gradients — galbramc / detail
  964. Compile fix for using grid laplacian — galbramc / detail
  965. Fix PETSc/TAO deprecation warnings — galbramc / detail
  966. Update to supersonic test case — waligura / detail
  967. Working supersonic case for develop — waligura / detail
  968. Try again to see if tests time out — waligura / detail
  969. Add CompressiblePower calculation — galbramc / detail
  970. Additional unit tests for new sensor with RANS. Found and fixed a few bugs in PDERANSSA2D and PDEEuler3D. Cleaned up solver interface for VMSD-BR2 somewhat. More unit tests and tidy up to come. — blsc / detail
  971. Add another quadratic viscous term to Body Force model — galbramc / detail
  972. Updated surface flux writer for tecplot (VMSDBR2 specific). Added developer exceptions in to the Euler with artificial diffusion space-time calls since they're not unit tested. — blsc / detail
  973. Add 8th order term to Body Forces — galbramc / detail
  974. Added the ability to specify is artificial diffusion should be applied to SA equation at run time. More unit tests. Caught a few more bugs. — blsc / detail
  975. More BodyForce output functionals — galbramc / detail
  976. Add vera exclusions — galbramc / detail
  977. Warning fixes — galbramc / detail
  978. Properly ignore ._ files in CMake — galbramc / detail
  979. Missing override keyword in SolverInterface_VMSD_BR2. ErrorOrder_2D_VMSDBR2_Triangle_AD_btest runs in serial (communicator is split and each rank runs independently). — blsc / detail
  980. One more warning fix — galbramc / detail
  981. Warning shows up in GNU 8 — galbramc / detail
  982. Fix warning — galbramc / detail
  983. Relax tolerances for intel — galbramc / detail
  984. needsSolutionGradient set to true for EntropyPower functional — galbramc / detail
  985. Add Entropy to rotor output — galbramc / detail
  986. Updated tolerance for intel in AVSensor_Source3D_Euler_btest — blsc / detail
  987. Fix EntropyPt calculation. Remove old Euler3D source test. — galbramc / detail
  988. Relax tolerances for intel — galbramc / detail
  989. More relaxed intel tolerances — galbramc / detail
  990. One more method for VMSD data transfer — galbramc / detail
  991. Stabilized output for PV functional — galbramc / detail
  992. First draft of Axisymmetric DBL problem, vera not working, may require multiple commits to get through jenkins — cwomack / detail
  993. Fixed scope issues — cwomack / detail
  994. Removed untested upwind option from isothermal walls in PDENavierStokes2D. It did not seem to be being used by any sandbox case or test. — blsc / detail
  995. fixed vera errors — cwomack / detail
  996. Actually remove the code related to the upwind flag. — blsc / detail
  997. added output axisymmetric unit tests — cwomack / detail
  998. Changed unit test tolerance — cwomack / detail
  999. Generalized axisym DBL for any z0 z1 — cwomack / detail
  1000. fixed vera errors — cwomack / detail
  1001. Add asymmetric term for rotor source — galbramc / detail
  1002. Fix compile errors — galbramc / detail
  1003. Fix bug in last commit — galbramc / detail
  1004. Cleanup sourcePositivity — galbramc / detail
  1005. Work around more floating point issues — galbramc / detail
  1006. More precision cleanup for AV source — galbramc / detail
  1007. Fogot a file — galbramc / detail
  1008. Allow setting critical surrogate values in 3D — galbramc / detail
  1009. Fix compile error — galbramc / detail
  1010. Compiler error and warning fixes — galbramc / detail
  1011. Make outer diffusion positvity source consisent with inner — galbramc / detail
  1012. Warning and tolernace fixes — galbramc / detail
  1013. Fix compile error — galbramc / detail
  1014. Cleanup 2D PressureGrad sensor — galbramc / detail
  1015. Relax tolerance — galbramc / detail
  1016. Missed one — galbramc / detail
  1017. Missed one more — galbramc / detail
  1018. Relax tolerance — galbramc / detail
  1019. Consistent 3D positvity source with Ben's thesis — galbramc / detail
  1020. Add asymmetric sensitvities for body forces. Some more cleanup of shock capturing. — galbramc / detail
  1021. Make PDEmitAVDiffusionOuter2D.h consistent — galbramc / detail
  1022. Fix warning and typo — galbramc / detail
  1023. Relax tolerance and fix warning — galbramc / detail
  1024. One more tolerance relaxation — galbramc / detail

#1508 (Apr 26, 2022, 10:25:12 PM)

  1. Add PETSc numerica factorization time. Fix warning. Fix AFLR test. — galbramc / detail
  2. make IBLVarDataType3D templated, to allow for both Real and Surreal etc. — shunz / detail
  3. added symmetry (i.e. no crossflow) BC for 4-eqn IBL3 — shunz / detail
  4. refactored conservative variables, which is the sames as the previous version for incompressible flow — shunz / detail
  5. scaled ke and lc eqns by 1/qe^2, but it didn't fix the symmetry plane instability — shunz / detail
  6. added an exception for stagnation point in IBL3 4-eqn formulation — shunz / detail
  7. Added flag to choose whether to include the sensor equation in the residual calculation and convergence checks — blsc / detail
  8. Removed default parameters in PDEmitAVSensor constructors associated with including the sensor equation in the residual calculation — blsc / detail
  9. added easier macro toggle for turning on/off amp+lag equations — shunz / detail
  10. fix formatting — shunz / detail
  11. add exception for corner case — shunz / detail
  12. minor refactoring of torpedo case for IBL3 in sandbox — shunz / detail
  13. added but commented out a hack for trying power-law crossflow velocity distribution — shunz / detail
  14. added BC dict missing from a previous commit.  minor cleanup of 4-eqn IBL3 stuff — shunz / detail
  15. updated H22 turb closure — shunz / detail
  16. Add Kyle Anderson 'boosting', but dissabled for now — galbramc / detail
  17. Add rotor source tecplot dump — galbramc / detail
  18. test fix: added required Dirichlet data for PyDict — allmaras / detail
  19. added PyDict option for including viscous fluxes in BCNone (default = false, no viscous fluxes); — allmaras / detail
  20. corrected PDE/BC dump files — allmaras / detail
  21. Forgot a file — galbramc / detail
  22. Fix segfault — galbramc / detail
  23. Fix bug in lean for camber blade — galbramc / detail
  24. Add quadratic camberline — galbramc / detail
  25. Upgrade intel compiler — galbramc / detail
  26. Add some instantiations — galbramc / detail
  27. Update MKL path for Intel oneAPI — galbramc / detail
  28. Added Space Time Case — jta29 / detail
  29. Fixes for sansLIPAIM — galbramc / detail
  30. reverted turbulent Cf1 and Hs1 closure to 2D — shunz / detail
  31. minor tweaks/comments — shunz / detail
  32. Started another set of turbulent closure models by copying over existing ones — shunz / detail
  33. added turb Cf1 closure — shunz / detail
  34. added turb H*1 closure — shunz / detail
  35. Updated Insantiation — jta29 / detail
  36. updated CDc closure — shunz / detail
  37. updated turb Cf2 closure — shunz / detail
  38. updated turb Hc2 closure — shunz / detail
  39. fixed function signature — shunz / detail
  40. fixed typo in function call. switched default to using new regularized turb closure — shunz / detail
  41. switched back to using 2D turb H*1 closure — shunz / detail
  42. Remove trailing white space — jta29 / detail
  43. Removed trailing white space — jta29 / detail
  44. added output of closure model derivatives for IBL3 flux system eigen-analysis — shunz / detail
  45. fixed line-length squawk — allmaras / detail
  46. Minor cleanup — galbramc / detail
  47. Fix instantiations — galbramc / detail
  48. made PyDict required parameter in ctor; moved discretization/stabilization parameter — allmaras / detail
  49. made SolutionData* unit tests consistent with ctors — allmaras / detail
  50. made sandbox codes consistent with changes to SolutionData*: (a) PyDict parameter — allmaras / detail
  51. removed new unit test (committed too soon) — allmaras / detail
  52. fixed unused variable squawk — allmaras / detail
  53. moved stabilization parameter next to PDE consistent with SolutionData* — allmaras / detail
  54. move stab parameter in SolutionData call — allmaras / detail
  55. made system tests consistent with SolutionData* — allmaras / detail
  56. removed duplicate look-up filename definitions — allmaras / detail
  57. added required PyDict() argument to SolutionData* — allmaras / detail
  58. removed CG two-phase test case (will bring it back later) — allmaras / detail
  59. making file name conventions consistent: "Galerkin_Stablized" is anything involving — allmaras / detail
  60. line length squawk — allmaras / detail
  61. Nightly fixes — galbramc / detail
  62. fixed some "_Stabilized" typos; removed unused includes from VMSD toys — allmaras / detail
  63. fixed "_Stabilized" typos — allmaras / detail
  64. fixed constructor bug for var args; now all ctors are consistent in "BCArgs&&... args" — allmaras / detail
  65. Fix SANS_Commit script — galbramc / detail
  66. Fix warning — galbramc / detail
  67. Correct Brenner AV in 2D and add 3D — galbramc / detail
  68. Arrary bound fix — galbramc / detail
  69. Warning fixes and relax nightly tolerance — galbramc / detail
  70. Don't try to use solutions from diverged linear solver — galbramc / detail
  71. added second generalized-H tensor that gives M-type grid Laplacian; it is the — allmaras / detail
  72. added second path that assumes incoming H field is same as original H^2 (computed — allmaras / detail
  73. added second path that assumes incoming H field is J*J^t (computed — allmaras / detail
  74. uncommented scaleArtificialViscosity function needed for Homotopy; added unit tests — allmaras / detail
  75. fixed scalar-h code for 1D; clean-up for 2D/3D — allmaras / detail
  76. added prescribed CD(x,y) field — shunz / detail
  77. Various small cleanups — galbramc / detail
  78. added optional vertex coordinates for single triangle/tet constructors — allmaras / detail
  79. Update unit tests — galbramc / detail
  80. Missed one — galbramc / detail
  81. Added prescribed CD field for inversion of CDiss correction factor beta — shunz / detail
  82. Encapsulate regularization constants in one header — hcarson / detail
  83. style ding — hcarson / detail
  84. minor tweaks of torpedo case IBL3 setup — shunz / detail
  85. Dump out unconverged restart files — galbramc / detail
  86. Dump out unconverged restart files — galbramc / detail
  87. Added lines for extracting final qfld — hcarson / detail
  88. Add AV to SA equation in 3D — galbramc / detail
  89. Fix surreal type — galbramc / detail
  90. Fix surreal type — galbramc / detail
  91. Mucking with a correction multiplier term to the dissipation relation — shunz / detail
  92. fixed long lines — shunz / detail
  93. Update test for previous commit — galbramc / detail
  94. mucking with dissipation relation inversion — shunz / detail
  95. Use MKL_PARDISO for PETSc DirectLU solver — galbramc / detail
  96. Only use one thread for DirectLU MKL_PARDISO — galbramc / detail
  97. move the PETSc solve time print — galbramc / detail
  98. Add PETSc option to scale by diagonal — galbramc / detail
  99. Added but commented out hacks with inflow BC bump/step features — shunz / detail
  100. Added a few prescribed CD(x,y) field based on RANS data — shunz / detail
  101. fillSystemVector syncs MPI DOF. Fix Sensor symmetry BC for 3D. More parallel testing with NaN's — galbramc / detail
  102. added new beta closure — shunz / detail
  103. Fix compile errors — galbramc / detail
  104. Fix compile errors — galbramc / detail
  105. Refactor isValidState checks in parallel — galbramc / detail
  106. Compile fix — galbramc / detail
  107. One more isValidState fix — galbramc / detail
  108. Add positive preserving source for 3D. Dissabled for now. — galbramc / detail
  109. Compile fix — galbramc / detail
  110. Add some asserts to 'Node Rank' for xfld tecplot dump — galbramc / detail
  111. adding curvilinear transformation functionality — ursachi / detail
  112. missed some files — ursachi / detail
  113. Also dump out xfld spirit — galbramc / detail
  114. Add set_dot and continuously relax sewFace tolerances for CamberBlade LE and TE surfaces. — galbramc / detail
  115. Format fix — galbramc / detail
  116. Fix the last fix — galbramc / detail
  117. Actually fix the fix of the last fix for the previous fix — galbramc / detail
  118. Add UpdateFraction to Galerkin Stabilized — galbramc / detail
  119. Added macro to toggle the use of prescribed CD(x,y) field — shunz / detail
  120. Allow MaxChangeFraction to work with SteveLogic — galbramc / detail
  121. Skip zombie DOF for UpdateFraction check — galbramc / detail
  122. fixed outdated class template argument — shunz / detail
  123. More fixes to allow UpdateFraction with SteveLogic — galbramc / detail
  124. Don't mix units — galbramc / detail
  125. fixed more outdated class template argument — shunz / detail
  126. Fix unit tests — galbramc / detail
  127. EmbeddedCGField fixes — galbramc / detail
  128. Fix one more missing EmbeddedCGField — galbramc / detail
  129. Updated Bernstein bases for use in CG fields. We dont have Hessians implemented, so stabilized CG needed a change to only calculate Hessians if we have stabilization turned off. To go above p3 in 3D CG, we need to change the basis functions to be match our implied ordering. Since Bernstein polynomials are modal and not hierarchical, we need to solve a linear system to do projections between orders. — blsc / detail
  130. Fixed unit tests.  Turned off the correction when ctau surpasses ctau_Tinit in 3D IBL_foureqn — shunz / detail
  131. Added 4D Bernstein bases (linear) on pentatope, with CG and DG fields — blsc / detail
  132. updated pyrite files for IBL3 four eqn laminar — shunz / detail
  133. fixed undefined references — shunz / detail
  134. git was not happy about the commit message...trying to fix it here..this commit is about adding definition of static class members in cpp file — shunz / detail
  135. added transformation function to ghost boundaries — ursachi / detail
  136. added test case — ursachi / detail
  137. cleaned up test case — ursachi / detail
  138. Adding adapt case with P1 corner singularity divergence weirdness. P2 and 3 are fine, but P1 error blows up 4 orders of magnitude.... — hcarson / detail
  139. Update tolerances on L2 project tests for Bernstein bases. Fix NaN issue with auxiliary problem for Homotopy. — blsc / detail
  140. Update tolerances for intel — blsc / detail
  141. Add Lagrange Node tecplot dump for CG fields — galbramc / detail
  142. Fix last commit — galbramc / detail
  143. added PyDict parameter (StatusOKatMaxIterations) to change status when solver hits — allmaras / detail
  144. Updated tecplot CG dump — galbramc / detail
  145. Compile fix — galbramc / detail
  146. added annotation — shunz / detail
  147. Allow zero bodies in a model — galbramc / detail
  148. Add Cylindrical system for Coles profile — galbramc / detail
  149. Maybe compile fixes — galbramc / detail
  150. Fix CG tecplot dump — galbramc / detail
  151. Default coordinate system for Coles profile — galbramc / detail
  152. intermediate commit in case of ACDL power down. sandbox still should not compile yet — shunz / detail
  153. 1st try at 3D NS/RANS no-slip isothermal/adiabatic BCs via Robin sans-Lagrange — allmaras / detail
  154. added -DUSE_GRID_LAPLACIAN to makefiles in all directories containing files where the #ifdef is used — allmaras / detail
  155. make FieldWeighted consistent with BasisWeighted (mostly involved adding param to PDE calls) — allmaras / detail
  156. replaced hard-coded false to PDE check for including viscous terms in boundary flux — allmaras / detail
  157. instantiations needed for uniform source in sensor PDE for artificial viscosity — allmaras / detail
  158. added #pragma message to all *.h files that use USE_GRID_LAPLACIAN; this will — allmaras / detail
  159. removed explicit #define/#undef USE_GRID_LAPLACIAN from unit tests that use this — allmaras / detail
  160. added Tq & Tg template parameters for sourceTrace — allmaras / detail
  161. added p_ref() function to density model to provide a means of accessing reference — allmaras / detail
  162. changed SANS_ASSERT to SANS_ASSERT_MSG to output message on error — allmaras / detail
  163. fixed typo: D1 -> D2 — allmaras / detail
  164. added PyDict option to specify Dirichlet data for Robin BC for AV; useful for — allmaras / detail
  165. added FieldWeighted unit test for sans-Lagrange Dirichlet BCs for Euler — allmaras / detail
  166. added test for jacobian/metric of an equilateral triangle — allmaras / detail
  167. exact data explicitly provided, rather than determined by do-loop dot product accumulation — allmaras / detail
  168. added unit grid where coordinates of all 4 corners can be input; facilitates making — allmaras / detail
  169. typo fix in unit test — allmaras / detail
  170. Enabled move construction and assignment. — hcarson / detail
  171. Added ability to output a temporary field containing the fully reconstructed p' adjoint — hcarson / detail
  172. Added some more move constructors. — hcarson / detail
  173. turn off clang warnings for '#pragma message' — allmaras / detail
  174. It's not a pointer you idiot. — hcarson / detail
  175. fixed quad order bug and added assert that all quad orders are the same — ursachi / detail
  176. More tecplot dump fixes — galbramc / detail
  177. fixed typo in unit test — allmaras / detail
  178. vera: lines too long — allmaras / detail
  179. Compile fix — galbramc / detail
  180. fixed quadrature bug elsewhere and fixed warnings — ursachi / detail
  181. replace several repeats of explicit pow(*, 2) coding with call to private function — allmaras / detail
  182. new MatrixS matmul instantiations needed for sans-Lagrange Robin BCs of no-slip isothermal NS/RANS 3D — allmaras / detail
  183. fix to test file to actually call the write method — hcarson / detail
  184. added Robin_sansLG to VMSD and VMSD-BR2 — allmaras / detail
  185. Hopefully finally got the link problems fixed — galbramc / detail
  186. Enabled move construction and assignment. — hcarson / detail
  187. Added some more move constructors. — hcarson / detail
  188. Added ability to output a temporary field containing the fully reconstructed p' adjoint — hcarson / detail
  189. refactored 3D box hex grid to allow for arbitrary list of node coordinates — shunz / detail
  190. added DOF count checks in box hex grid — shunz / detail
  191. more #include's for Robin_sansLG BCs — allmaras / detail
  192. added curvilinear transformation and unit tests — ursachi / detail
  193. added missing includes (for std::shared_ptr) — ursachi / detail
  194. added another missing include for std::shared_ptr — ursachi / detail
  195. hopefully final include for shared_ptr — ursachi / detail
  196. fixed cmakefiles — ursachi / detail
  197. added CG field instantiation for IBL3 Qauxv field — shunz / detail
  198. minor annotation — shunz / detail
  199. refactoring to show intention more clearly — shunz / detail
  200. made some fixes for failing tests — ursachi / detail
  201. added/deleted #include's for IntegrandBoundaryTraces; added Robin_sansLG where needed, — allmaras / detail
  202. new MatrixS matmul instantiations needed for Robin_sansLG BCs — allmaras / detail
  203. Trying to fix vera errors — jta29 / detail
  204. fixed spacetime exception — ursachi / detail
  205. minor cleanup — shunz / detail
  206. Add missing USE_GRID_LAPACIAN. Minor PDERANSSA formatting fixes. Fix for Coles RANSSA. — galbramc / detail
  207. Add instantiation — galbramc / detail
  208. Use H instead of H^2 in Robin BCs for AV when USE_GRID_LAPLACIAN is defined. — savithru / detail
  209. Update BCRANSSA3D — galbramc / detail
  210. Fixed missing method for dumping the perturbation field. In the process added many additional move constructors/assignments. Also added an implicit conversion for ElementPair, allowing it to be inserted directly into map/unordered map/set etc. A bunch of small house cleaning tasks too. Deleted explicit constructors that could just be default. — hcarson / detail
  211. quadOrder check shouldn't be done if using TopoD1 — ursachi / detail
  212. Fixing errors — jta29 / detail
  213. updated unit tests for curvilinear transformation — ursachi / detail
  214. accidentally deleted default constructor — hcarson / detail
  215. EVEN MORE MOVE CONSTRUCTORS — hcarson / detail
  216. cleaning up of failing unit tests (mainly changing some — ursachi / detail
  217. forgot to delete something — ursachi / detail
  218. removed unnecessary tecplot dumps — ursachi / detail
  219. another attempt to make jenkins stop complaining, now explicitly — ursachi / detail
  220. UniqueTrace a mutable struct. Immutability doesn't buy anything, and just prevents compiler optimization. Additionally, deleted a large number of unneeded constructors, as the compiler provided versions are better and safer. If you write no code, you can write no bugs! See CPP guidelines rule of zero — hcarson / detail
  221. fixed warning — ursachi / detail
  222. deleted unnecessary stuff and cleaned up some additional warnings — ursachi / detail
  223. adding back the default constructor, something funky happens with default initializer. Also change MatrixS to use stdarray, and then to have the 5 constructors as defaults. — hcarson / detail
  224. Fix RANS BC with Conservative variables. More RANSBC unit tests. Add smoothmin linearization. First attempt at blade optimization. — galbramc / detail
  225. Forgot file — galbramc / detail
  226. Add missing include — galbramc / detail
  227. Missed a file — galbramc / detail
  228. Compile error fixes — galbramc / detail
  229. Missed one — galbramc / detail
  230. added checkInputs calls when setting up transformation function — ursachi / detail
  231. fixed memory issue when assigning qfld DOFs — ursachi / detail
  232. minor addition of annotation — shunz / detail
  233. deleted more unnecessary functions — ursachi / detail
  234. Add EGADS ruled wrapper — galbramc / detail
  235. Fix NormalField linearization. — galbramc / detail
  236. Forgot some files — galbramc / detail
  237. Add vectorization — galbramc / detail
  238. Fix Surreal changes — galbramc / detail
  239. bounding box should search along traces when using transformation even — ursachi / detail
  240. added 3D entropy variables for Euler/NS — allmaras / detail
  241. Fix compile error — galbramc / detail
  242. Fix ruled interface — galbramc / detail
  243. Fix warning — galbramc / detail
  244. Use PTC solve before constrained solve with blade optimization — galbramc / detail
  245. Fix warning — galbramc / detail
  246. Fix uninitialized data. Dissable normal field sensitivity for now. — galbramc / detail
  247. Add missing instantiation — galbramc / detail
  248. Fix BodyForce requiring pProp specified — galbramc / detail
  249. flipped output_stream flag to true (thought this was down with last commit, but not) — allmaras / detail
  250. unit tests for Robin_sansLG BCs for 3D NS — allmaras / detail
  251. Restore DeveloperEmailAddresses — galbramc / detail
  252. lowered tolerance for test — ursachi / detail
  253. Updated nu-max calculation when USE_GRID_LAPLACIAN is defined. Added a default argument to AVSensor_Source2D_TwoPhase to model a constant source term if needed. — savithru / detail
  254. cleaned up and fixed sandbox case on FP for S-shaped duct — shunz / detail
  255. commented out hacks — shunz / detail
  256. Starting to implement BCDataFields by copying over stuff — shunz / detail
  257. added and experimented with BCDataFieldManager class.  Ready to further extend this for BCDataField implementation. — shunz / detail
  258. minor commenting — shunz / detail
  259. minor refactoring before adding BC data field stuff — shunz / detail
  260. Initial prototype of introducing BC data fields into algebraic equation set and instantiations of IntegrandBoundaryTraces — shunz / detail
  261. trying to equip IntegrandBoundaryTrace with BCDataField: succeed in contructor but failed due to preset Integrand type defi in IntegrateBoundaryTrace_Dispatch.dispatch()....now turning off all the hacks, which will be removed in the future — shunz / detail
  262. some tidying up — shunz / detail
  263. hide away to-be-removed stuff/hacks — shunz / detail
  264. Refactored 3D full potential stuff, particularly adding wall transpiration BC.  Start to pave ways for including BC data field in BC class — shunz / detail
  265. Avoid failed solves when optimizing body force blades — galbramc / detail
  266. Fix for last commit — galbramc / detail
  267. Vera fixes — galbramc / detail
  268. Tried wall transpiration in S-duct FP case — shunz / detail
  269. append BC data field to 3D FP wall transpiration BC — shunz / detail
  270. renaming variables for clarity — shunz / detail
  271. Enabled using BC data field by passing it to the BC class.  Tested on full potential 3D case.  Removed previous attempt of trying to let integrand class to own BC data field — shunz / detail
  272. removed code from a previous attempt to implement BC data field — shunz / detail
  273. Change objective return on solve failure for BodyForce optimization — galbramc / detail
  274. refactored BC data evaluation call from element — shunz / detail
  275. Started working on Auxv projection equation for IBL+FP coupling: finished the qauxv component in the projection integrand — shunz / detail
  276. minor refactoring to reduce unnecessary memory allocation — shunz / detail
  277. modulize velocity calculation in 3D FP solver — shunz / detail
  278. removed const reference for interior trace groups member data and made it a copy; — allmaras / detail
  279. added option to return success flag if max number of iterations are reached without converging; — allmaras / detail
  280. added interface for derivedSurfaceQuantity with parameter — allmaras / detail
  281. typo fixes — shunz / detail
  282. Added new 4-variable Qauxv formulation and associated Field instantiations — shunz / detail
  283. Initial work on Auxv equation with 3D FP solver: compiles now but needs to be completed — shunz / detail
  284. Some cleanup on Auxv equation (with 3D FP) residual — shunz / detail
  285. some more cleanup before completing Auxv equation jacobian — shunz / detail
  286. Auxv equation now works for a trivial test case.  Now need to work out volume-surface grid connectivity — shunz / detail
  287. minor cleanup — shunz / detail
  288. minor refactoring/annotation — shunz / detail
  289. Initial work on contructing surface mesh corresponding to a boundary group of volume mesh (BoxHex). TBD: Needs nontrivial testing and interior trace groups — shunz / detail
  290. tweaks — hcarson / detail
  291. Added nontrivial test for Auxv projection from FP solution — shunz / detail
  292. minor typo fix in comments — shunz / detail
  293. Added interior trace elements to the boundary surface mesh of BoxHex.  Tried/verfified solving IBL3 on this surface mesh in the flat plate laminar BL case — shunz / detail
  294. minor cleanup — shunz / detail
  295. Update for CentOS 7 — galbramc / detail
  296. minor cleanup/refactoring — shunz / detail
  297. Upgrade AFLR — galbramc / detail
  298. Fix unit test — galbramc / detail
  299. Add a stack parameter to CamberBlade — galbramc / detail
  300. Add option to constrain Mach number with BodyForces — galbramc / detail
  301. Fixes for specifying NormalMach as BodyForce constraint — galbramc / detail
  302. Rework Pprop output functional for BodyForces. Fix assertions for SAQCR. — galbramc / detail
  303. Unit test fixes — galbramc / detail
  304. Relax tolerance — galbramc / detail
  305. Fix bug in AFLR interface — galbramc / detail
  306. Relaxed basis function tolerances for intel — galbramc / detail
  307. Relax DG tolerances for intel — galbramc / detail
  308. Lots of warning fixes — galbramc / detail
  309. Tolerance fixes for intel compiler — galbramc / detail
  310. More warning fixes — galbramc / detail
  311. More warning fixes. Move adjoint MPI sync. — galbramc / detail
  312. Fix compile error — galbramc / detail
  313. Missed a warning — galbramc / detail
  314. Another warning fix — galbramc / detail
  315. More warning fixes — galbramc / detail
  316. Relax timeout — galbramc / detail
  317. Nightly fixes. Make TRIANGLE optional. — galbramc / detail
  318. cppcheck fixes — galbramc / detail
  319. Upgrade to ESP 1.19 (minimium required). Lots of cppcheck fixes. — galbramc / detail
  320. Warning fixes for CAPS — galbramc / detail
  321. Fixes to make triangle optional — galbramc / detail
  322. Dissable a test for now — galbramc / detail
  323. Missed a TRIANGLE suppression — galbramc / detail
  324. Relax test time — galbramc / detail
  325. One more use of TRIANGLE — galbramc / detail
  326. Relax one more test timing — galbramc / detail
  327. Update BoostBuild — galbramc / detail
  328. Add polynomial velocity profiles to Coles — galbramc / detail
  329. Some Coles profile fixes — galbramc / detail
  330. Refactor Rotor constraint — galbramc / detail
  331. Fixes for Rotor outputs — galbramc / detail
  332. Forgot a file — galbramc / detail
  333. Fix compile error — galbramc / detail
  334. Missed an output option — galbramc / detail
  335. More rotor output fixes — galbramc / detail
  336. Fix warning — galbramc / detail
  337. Allow no constraints during optimization — galbramc / detail
  338. Add back regular solve during body force optimization — galbramc / detail
  339. Relax timing — galbramc / detail
  340. Fix body force optimization for RANS — galbramc / detail
  341. More verbose error message — galbramc / detail
  342. One more body force optimization fix — galbramc / detail
  343. Update sansLIPAIM for ESP 1.19 — galbramc / detail
  344. Fix Rotort_GlobalConstraint convergence check — galbramc / detail
  345. Fix data transfer — galbramc / detail
  346. Add missing Python GIL protections — galbramc / detail
  347. Some nightly fixes. Better specification for building boost. — galbramc / detail
  348. Add Coloes polynomial pressure profile — galbramc / detail
  349. Add RANS Coles pressure profile. Relax test tolerances. Other small fixes. — galbramc / detail
  350. Remove upper bound check on Coles pressure polynomial — galbramc / detail
  351. Add ProfileDebug_eta_max — galbramc / detail
  352. Another tweak to Coles pressure profile — galbramc / detail
  353. Add polynomial pressure profile to back pressure BC — galbramc / detail
  354. Fix required delta for static back pressure — galbramc / detail
  355. VMSD-BR2 was using the wrong quadrature rule to calculate the non-zero pattern. Jacobian has been updated so that it should use correct (1 point) quadrature for non-zero pattern — blsc / detail
  356. Added logic to JacobianCell_VMSD_BR2 so that the static condensation matrices are not used for the non-zero patter calculation. Under-integration resulted in these matrices being singular. — blsc / detail
  357. Refactor BodyForceSolver — galbramc / detail
  358. Suppress Boost serialization bug for VectorS<M,SurrealS> — galbramc / detail
  359. Add missing include — galbramc / detail
  360. Test syncDOFs_MPI with more complex data types — galbramc / detail
  361. Add missing ifdef — galbramc / detail
  362. Put back distance function calculation — galbramc / detail
  363. Fix BodyForce solver initial condition — galbramc / detail
  364. Exlicitly use SANS::SurrealS with EGADS. Update NormalField test. — galbramc / detail
  365. Take away a toy — galbramc / detail
  366. Intel workaronud... — galbramc / detail
  367. Test the correct Face — galbramc / detail
  368. Fix compile error — galbramc / detail
  369. Warning fixes — galbramc / detail
  370. Finally found the NormalField bug. — galbramc / detail
  371. Fix OutGroup specification for BodyForce Solver — galbramc / detail
  372. Add Optimization option to BodyForce solver. — galbramc / detail
  373. Forgot to update checkInput function. — galbramc / detail
  374. Fix use of incorrect dictionary — galbramc / detail
  375. Fixes for boundary triangle orientation with refine — galbramc / detail
  376. Split trapped edges with refine. Check for all 0 element in distance function. Other small fixes. — galbramc / detail
  377. Forgot to update refineParam::checkInputs — galbramc / detail
  378. Updates to refine interface and print requested complexity with MOESS — galbramc / detail
  379. Use log_eucliean edge length with refine — galbramc / detail
  380. Try to fix suitesparse metis dilemma. Add more g++ and clang++ copmiler versions. — galbramc / detail
  381. gnu 11 fixes — galbramc / detail
  382. Remove -lc++ from clang flags — galbramc / detail
  383. Add missing include — galbramc / detail
  384. Upgrade ccache — galbramc / detail
  385. Fix SANSparallel MMA optimization — galbramc / detail
  386. Cleanup for last commit — galbramc / detail
  387. Removed execute permission for a .cpp file — shunz / detail
  388. Update ccache path — galbramc / detail
  389. Compile fixes for clang-10 — galbramc / detail
  390. Relax tolerance — galbramc / detail
  391. More compile fixes — galbramc / detail
  392. Warning fixes — galbramc / detail
  393. Lots of compile warnings and other fixes — galbramc / detail
  394. Use default functions in MatrixSymS. Increase execution times for coverage. Warning fixes. — galbramc / detail
  395. Fix typo — galbramc / detail
  396. Relax toleranes. Upgrade to AFLR 10.17.5. — galbramc / detail
  397. Use appropriate architecture for AFLR — galbramc / detail
  398. Update AFLR3 and use TRANSP_INT_BL for Body Force boundaries — galbramc / detail
  399. Fix warnings — galbramc / detail
  400. Update finding and checking AFLR — galbramc / detail
  401. Relax execution time — galbramc / detail
  402. Intel is just different... — galbramc / detail
  403. Relax more tolerances and fix indentations — galbramc / detail
  404. More intel relaxation — galbramc / detail
  405. Use system lcov and relax intel tolerance — galbramc / detail
  406. Use xHost instead of xhost so ccache works with Intel — galbramc / detail
  407. Add surface tecplot dump to BodyForce Solver — galbramc / detail
  408. Fix for body force surface outputs — galbramc / detail
  409. Added Pointwise mesh generator — galbramc / detail
  410. Parallel fix and forgot a file — galbramc / detail
  411. Fix Pointwise h calculation. Fix link errors. — galbramc / detail
  412. Small fix to Pointwise glf script — galbramc / detail
  413. Added waligura@mit.edu to DeveloperEmailAddresses — waligura / detail
  414. PDERANSSA2D changes which take out ntref as a variable in the PDERANS function and unit test. The unit test update is not ideal right now since I am still waiting on a way to calculate some terms, but there is a SANS developer exception for the time being. Needed to push it to start building off some new SA varaitions off of it. — waligura / detail
  415. Removing white spaces in PDERANSSA2D — waligura / detail
  416. Add isotropic MOESS optimization option for Pointwise — galbramc / detail
  417. Fixes to PDERANSSA2D and unit test — waligura / detail
  418. Another formatting change — waligura / detail
  419. Try again — waligura / detail
  420. messed up spacing at the end of the file — waligura / detail
  421. Valgrind python suppressions — galbramc / detail
  422. Nightly clang analyzer suppressions — galbramc / detail
  423. Correct volume calculation for Pointwise — galbramc / detail
  424. Pointwise fix for dimensionality — galbramc / detail
  425. changes to sandbox cases with nuref defined — waligura / detail
  426. Fix instantiation — galbramc / detail
  427. Clang compiler fix — galbramc / detail
  428. Relax timing for one test — galbramc / detail
  429. More changes to sandbox cases for nuref deletion update — waligura / detail
  430. Initilizing variables and raising the convergence tolerance — waligura / detail
  431. Just lowering the tolerance a little bit more on the PDERANS unit test to try and get it through Intel. I need to update this later anyway so this may be a temporary fix — waligura / detail
  432. Actually finding that closetol is defined multiple times in this unit test — waligura / detail
  433. Use Python 3.8.10 for valgrind and sanitizer — galbramc / detail
  434. Messing around with the tolerances a little bit more — waligura / detail
  435. Improved linesearch console output. Now when verbosity is on, the linesearch outputs whether a residual is increased (+), decreased (-), or converged (*) at the locations tested. — blsc / detail
  436. Updates to Newton. Neater verbose outputs to console for residual. Tracking nonlinear iterations taken correctly for cases where Newton does not converge. — blsc / detail
  437. Update PDEmitAVSensor2D and PDEmitAVSensor3D to better handle the afld, including system tests to ensure consistency. This required a few changes in the PDEEulermitAVDiffusion classes (more to changes to come with these). Also added a h/p scaling for the 2D sensor viscosity with unit test. — blsc / detail
  438. typo fixes in Pointwise tcl script — allmaras / detail
  439. Removed duplicated class definition in two cpp files, which may have led to unitialized data error reported by valgrind. — shunz / detail
  440. Fix nightly script — galbramc / detail
  441. Another nightly script fix — galbramc / detail
  442. Updates to Euler/NS mainly to improve the custom tecplot output. Updates to artificial diffusion classes to remove the a-field from params, since those should all be handled by the PDESensor classes now. Updates to the custom tecplot output function for RANSSA so we get the SA variable in the domain, and RANSSA fluxes at the boundary. Added PDEEulermitAVDiffusion3D.h to the exclusion list for file size. Updates to boundary conditions mostly to handle the a-field in the params in a cleaner way. — blsc / detail
  443. Renamed analytic functions with array output to hopefully avoid confusion — shunz / detail
  444. Updated PDESourceOnly and unit tests. Required some modification of a few PDEs in the process. — blsc / detail
  445. Updated homotopy continuation algorithm. This involves an update to the constructor, so the relevent sandbox cases have been updated. A few sandbox cases and unit test have been disabled. The unit test will be re-enabled once it has been updated to the new interface (the content is currently lacking anyway). Also added a function to SolverInterface_VMSD_BR2 to return the total (q + qp) fine (p+1 without subtraction) adjoint for output to Tecplot. — blsc / detail
  446. Minor edits — shunz / detail
  447. Add ProjectToQauxi equation class for coupling FP+IBL3 — shunz / detail
  448. Rename VectorFunction3D to ArrayFunction based on new naming convention — shunz / detail
  449. Removed all the cases that were disabled in the sandbox. Re-added the homotopy unit tests (still need more work, but to check basic functionality). Updated advection-diffusion and PDEHomotopy interfaces to support the new unit test. — blsc / detail
  450. Add initial framework for Auxi equation for FP-IBL3 coupling — shunz / detail
  451. Minor cleanup — shunz / detail
  452. Removing some secluded ntref values pointed out by Ben — waligura / detail
  453. add anonymous namespace for safety — shunz / detail
  454. Included all the necessary fields int Auxi equation for FP-IBL3 — shunz / detail
  455. Renamed integrand for projection to Qauxi — shunz / detail
  456. Added the ability to specify parameters for positivity preserving source in Euler. Updated tests to reflect change in constructor. — blsc / detail
  457. I think this will fix the error Jenkins bought up for the Euler with rotor PDE. — blsc / detail
  458. Fix Euler with rotor PDE boundary condition — blsc / detail
  459. Fix Euler with rotor PDE boundary condition -- Surreals could be passed through the PointSequence too. — blsc / detail
  460. Removed unused header from Homotopy.h — blsc / detail
  461. Warning fixes — blsc / detail
  462. More warning fixes for missing override keyword. — blsc / detail
  463. Update to latest avro — galbramc / detail
  464. avro parallel fixes — galbramc / detail
  465. Dissable avro graphics — galbramc / detail
  466. add const qualifier just to be extra cautious — shunz / detail
  467. Initial working prototype of projection to Qauxi without the div.(M) term — shunz / detail
  468. Distinguish volume and manifold quadrature order configurations — shunz / detail
  469. Rename integrand class for clarity — shunz / detail
  470. 4D fixes, and rename Ptope to Pentatope — galbramc / detail
  471. Missed a file — galbramc / detail
  472. Remove file dump — galbramc / detail
  473. Fix warning — galbramc / detail
  474. Add initial API of manifold integrands for Auxi equation — shunz / detail
  475. Put avro WriteConformity back, but does nothing for now — galbramc / detail
  476. add more details to integrand of manifold boundary trace for FP-IBL3 coupling — shunz / detail
  477. More avro parameter fixes — galbramc / detail
  478. Reduce Pentatope mesh size. Fix accidental commit — galbramc / detail
  479. Warning fix — galbramc / detail
  480. rename files/classes for clarity — shunz / detail
  481. add missing include — shunz / detail
  482. [intermediate progress] compiling prototype of manifold boundary trace integrals in auxi equation for FP-IBL3 coupling — shunz / detail
  483. minor edit — shunz / detail
  484. Removed unnecessary destructor — shunz / detail
  485. typo fix — shunz / detail
  486. Access cell group via global indexing instead of local — shunz / detail
  487. Initial working prototype of new Field for Qauxi for FP-IBL3 so that DOFs can be viewed as volume boundary trace and area cell at the same time — shunz / detail
  488. Type-related bugfix in FP PDE — shunz / detail
  489. cleaned up unused method — shunz / detail
  490. Updated VMSDBR2 statically condensed Jacobian calculating to accept multiple RHS to condense using a single Jacobian calculation. Updated linear solvers for globally constrained systems to use this new functionality. Added unit tests to test that results from multiple-RHS code matches applying the single-RHS code to each RHS individually. This update will only affect globally constrained systems (using VMSDBR2). — blsc / detail
  491. Hard coded manifold/surface quad grid that matches z-min boundary group of a box hex grid — shunz / detail
  492. Added comments to BC data field implementation — shunz / detail
  493. Minor typo fix — shunz / detail
  494. Refactored DOF indexing contruction to ensure consistency between volumeb boundary trace field and area cell field — shunz / detail
  495. Rename variable for clarity.  Add exception to guard against misuse of BC data in full potential wall transpiration BC — shunz / detail
  496. Start a new case of FP-IBL3 coupling by copying from existing FP-only case. — shunz / detail
  497. Fixed clang warnings. Fixed abstract class error due to not implementing static condensation update to MKL. Have added a developer exception so the execution path exists, but extension still not implemented for MKL. — blsc / detail
  498. Refactored AES Project to Qauxi for flat plate 3D panel so that it's ready to be generalized for 3D FP coupling as well — shunz / detail
  499. Removed a deprecated header file — shunz / detail
  500. Add partial specialization to support block 4x4 FP+IBL3 coupling — shunz / detail
  501. Fixed missing BC parameter checks — shunz / detail
  502. Fixed long line formatting — shunz / detail
  503. Fixed more intel warnings. Added unit tests for the multi-RHS logic for UMFPack and MKL. The MKL test ensures that a developer excpetion occurs, since the logic for MKL has not been implemented. Moved the sum-constrained algebraic equation set in to its own file (like the Advection and Heat equation sets). — blsc / detail
  504. minor cleanup — shunz / detail
  505. Add static data member to identify the size of jacobian (i.e. number of equations and variables) — shunz / detail
  506. Add unit test for block 4x4 system of FP-IBL3 coupling. Still a working progress, but test compiles and runs — shunz / detail
  507. Fixed more intel warnings. Added unit tests for the multi-RHS logic for FMGRES. The FGMRES test ensures that a developer excpetion occurs, since the logic for MKL has not been implemented. — blsc / detail
  508. Completed Auxi equation for FP-IBL3 coupling — shunz / detail
  509. Fix a bug in block 3x3 and 4x4 system of equations: MatrixSize().  It has been identified because perviously block (2,1) is decoupled/zero for previous test cases — shunz / detail
  510. Refactor jacobian ping test screen output for clarity — shunz / detail
  511. Refactor JacobianParam to allow for multiple parameters of different dimension, e.g. for Auxi equation of FP-IBL3 coupling — shunz / detail
  512. Pass block 4x4 block algebraic equation set unit test without coupling for FP and Auxv equations — shunz / detail
  513. add const qualifiers — shunz / detail
  514. Add annotation to AES_Auxi — shunz / detail
  515. Remove redundant class template arguments — shunz / detail
  516. Remove AGLS. Add blockage and viscous terms to RotorSource. — galbramc / detail
  517. Missed a file — galbramc / detail
  518. Refator AES_auxv mass matrix jacobian computation for clarity and simplicity — shunz / detail
  519. BC fixes — galbramc / detail
  520. Fix include — galbramc / detail
  521. More boundary condition cleanup — galbramc / detail
  522. Relax tolerance — galbramc / detail
  523. Warning fix — galbramc / detail
  524. Auxi parameter jacobian is now compiling. — shunz / detail
  525. Rename class and file — shunz / detail
  526. Added functionality to project from a DG to a CG field defined on the same x-field. — blsc / detail
  527. Remove infinite x-dervative for thickenss. Fix warnings. — galbramc / detail
  528. DG ot CG prjection now uses explicit instantiation. — blsc / detail
  529. Simplify jacobian calculation of Auxi equation as it's simply mass matrix for Galerkin projection — shunz / detail
  530. Add a specialized IntegrateCellGroups method for reuse in FP-IBL3 coupling implementation — shunz / detail
  531. More strict templates for AV. Add strongFluxViscous to AV. — galbramc / detail
  532. modified (solution error)^2 to use dot product; now allows general ArrayQ<T> solution — allmaras / detail
  533. Warning fixes — galbramc / detail
  534. Fix for older cmake versions — galbramc / detail
  535. Replace max with smoothRamp_tanh2 for artificial viscosity — galbramc / detail
  536. Some more tests — galbramc / detail
  537. Fix smoothRamp_tanh2. Fix ThicknessNACA6 to use fabs instead of abs. — galbramc / detail
  538. Suppress compiler warning — galbramc / detail
  539. Fix warning and relax tolerance — galbramc / detail
  540. Enable viscous body forces for Euler — galbramc / detail
  541. Completed Auxv_Qinv jacobian — shunz / detail
  542. Added a test to check that bubble modes were not present in VMSD after static condenstaion for a partial Newton step. — blsc / detail
  543. Vera exclusion needed for new unit test (L006). — blsc / detail
  544. Added parallel test for homotopy, found bug in parallel, fixed bug in parallel. — blsc / detail
  545. Discrete blockage gradient — galbramc / detail
  546. Forgot a file — galbramc / detail
  547. Added an example homotopy adapt in 3D with RANS, and some missing function calls. — blsc / detail
  548. Vera fix — galbramc / detail
  549. Fix compile error — galbramc / detail
  550. Added HiFW Joukowski case using homotopy (still WIP). Updates to artificial viscosity interface to resolve some template mis-matches during Joukowski case set up. — blsc / detail
  551. Add annotations — shunz / detail
  552. Another compile fix — galbramc / detail
  553. Another compile fix — galbramc / detail
  554. Fixed error in PETSc Dicts. — blsc / detail
  555. Relax tolerance. Add PETScInit. Suppress warning. — galbramc / detail
  556. More warning fixes — galbramc / detail
  557. PDERANS3D fixes — galbramc / detail
  558. Fixes for AVSensor_Source_VMSD_SPD — galbramc / detail
  559. Fix ping test — galbramc / detail
  560. Change git update alias — galbramc / detail
  561. Fix sensitvity calculation — galbramc / detail
  562. Don't require name for camber free parameters — galbramc / detail
  563. Implement BCNone for VMSD BR2. I hope nobody has been using it... — galbramc / detail
  564. Completed d(FP)/d(Qauxi) coupling jacobian for FP-IBL — shunz / detail
  565. Forgot to commit unit test on d(FP)/d(Qauxi) jacobian — shunz / detail
  566. Removed redundant files for discarded Auxi and Auxv equation implementation — shunz / detail
  567. Removed more discarded implementation for Auxi (in FP-IBL3) — shunz / detail
  568. Add linear algebra instantiations for FP-IBL3 — shunz / detail
  569. Refactoring to keep up with JacobianParam's updated template arguments — shunz / detail
  570. Fixed formatting — shunz / detail
  571. Minor refactoring — shunz / detail
  572. Add unit test for box grid and its derived boundary manifold grid — shunz / detail
  573. Minor cleanup — shunz / detail
  574. Add more unit test — shunz / detail
  575. Add unit test for FieldVolume_DG_BoundaryTrace_matchAreaCell — shunz / detail
  576. Bug fix: previously, allocated memory for dynamic matrix but didn't initialize to zero — shunz / detail
  577. Completed 4x4 block system jacobian ping test for FP-IBL3 coupling — shunz / detail
  578. Added Tt output for Rotor — galbramc / detail
  579. added instantiations for Newton solution of FP-IBL3 equations — shunz / detail
  580. Solved first FP-IBL3 case with Newton solver — shunz / detail
  581. added instantiations for MKL and PETSc for FP-IBL3 — shunz / detail
  582. added implementation for PETSc for FP-IBL3 — shunz / detail
  583. modularized S-shaped duct grid points generation — shunz / detail
  584. debugging (for sporadically slow FP residual/jacobian) and refactoring FP-IBL3 test case — shunz / detail
  585. mod: VectorFunction -> ArrayFunction — allmaras / detail
  586. inviscid Joukowski with interface to Pointwise — allmaras / detail
  587. Added more profiling info for debugging FP-IBL3 — shunz / detail
  588. added verbose printout for debugging — shunz / detail
  589. fixed formatting errors — shunz / detail
  590. Fix Tt rotor output — galbramc / detail
  591. fixed lines that were too long — allmaras / detail
  592. fixed promote_Surreal bug (only showed up for USE_GRID_LAPLACIAN) — allmaras / detail
  593. Vector -> Array fix to be consistent with new Array*Function nomenclature — allmaras / detail
  594. added Array2Function2D class (2-component, each an analytic function) with unit test; — allmaras / detail
  595. added PyDict options for xz and yz angle offsets for 3D corner singularity — allmaras / detail
  596. Fixes for running Joukowski with avro and refine — galbramc / detail
  597. Fixes for triangle — galbramc / detail
  598. Fix for triangle with holes — galbramc / detail
  599. some cleanup on full potential PDE — shunz / detail
  600. refactored and added to residualDecreaseStatus(.) — shunz / detail
  601. fixed over-array-bound access — shunz / detail
  602. switched assertions from runtime to compile time — shunz / detail
  603. refactored FP-IBL3 S-duct test case — shunz / detail
  604. forgot to commit this... refactored linear solution checker — shunz / detail
  605. removed redundant partial specialization in AES_PTC — shunz / detail
  606. annotated PTC implementation of paramfld_ and paramfldpast_ — shunz / detail
  607. beautified Newton iteration printout — shunz / detail
  608. refactored an MatrixS constructor — shunz / detail
  609. added comments — shunz / detail
  610. enabled PTC for FP-IBL3 4x4 coupling — shunz / detail
  611. fixed FP and IBL side wall BC — shunz / detail
  612. refactored std::vector access to use bound checking — shunz / detail
  613. added comments on how/why CFL changes in PTC iterations — shunz / detail
  614. refactored PTC printout & dump — shunz / detail
  615. minor tweak to test case — shunz / detail
  616. Refactored S-duct box grid — shunz / detail
  617. Cleaned up 3D FP BC — shunz / detail
  618. some cleanup — shunz / detail
  619. added commented out code for timing — shunz / detail
  620. fixed warnings — shunz / detail
  621. added sanity check.  some cleanup — shunz / detail
  622. changed IBL3 surface normal orientation convention to be compatible with FP-IBL3 coupling — shunz / detail
  623. Refactored projection onto Qauxv to be only in-surface velocity components in FP-IBL3 coupling — shunz / detail
  624. added assertion to guard against misuse — shunz / detail
  625. Consolidated auxi equation implementation for 3D full potential and panel — shunz / detail
  626. minor cleanup — shunz / detail
  627. Merged ProjectToQauxi3D implementation for panel and FP coupling with IBL3 — shunz / detail
  628. more cleanup on include — shunz / detail
  629. Cleaned up and merged interior trace integrand for IBL3 and Auxi.  Renamed files — shunz / detail
  630. added missing include that was accidentally removed — shunz / detail
  631. cleaned up include related to 2D/3D manifold cell integrands — shunz / detail
  632. more cleanup of include — shunz / detail
  633. Cleaned up panel+IBL3 case — shunz / detail
  634. added option in IBL3 to choose how nrm_surf orientation relates to e1 and e2 — shunz / detail
  635. minor test case cleanup/tweaks — shunz / detail
  636. turned off (1) LF flux, (2) mass correction to flux and (3) amp+lag equations for IBL3 — shunz / detail
  637. fixed style — shunz / detail
  638. refactored param tuple type for better consistency between indexing, ParamTuple and FieldTuple — shunz / detail
  639. renamed parameter field type — shunz / detail
  640. refactored parameter type for IBL3 — shunz / detail
  641. refactored JacobianParam class since the previous implementation is quite limiting — shunz / detail
  642. updated JacobianParam usage in test cases following its refactoring — shunz / detail
  643. more cleanup on JacobianParam usage — shunz / detail
  644. updated use cases involving Auxi equation in panel+IBL3. deleted sandbox cases that are not worth maintaining — shunz / detail
  645. updated use cases of new PDEIBL3FourEqn API — shunz / detail
  646. fixed full potential unit tests — shunz / detail
  647. fixed a bug/typo: flipped divM and divM_rhoe flux calculation for Auxi. Fortunately, the effect on current test cases is minimal since they are incompressible flows — shunz / detail
  648. fixed IBL unit tests — shunz / detail
  649. minor cleanup of 3D IBL PDE and associated block jacobian ping test — shunz / detail
  650. Removed the dedicated (yet redundant) boundary trace integrand for 3D auxi; instead, use 3D manifold BCNone integrand.  Renamed 2D/3D BCNone integrands to reflect its general purpose, not limited to IBL PDE — shunz / detail
  651. refactored/fixed Surreal type definitions to use proper/general size variable — shunz / detail
  652. accidentally forgot these pieces two commits earlier, when updating auxi BCNone integrand — shunz / detail
  653. fixed some compile errors for auxi equation and boundary integrand — shunz / detail
  654. minor integrand cleanup — shunz / detail
  655. refactored auxi equation's cell integrand to be PhysDim-agnostic, in prep for generalization of auxi aes class — shunz / detail
  656. Renamed auxi aes class to be not 3D specific, in prep for generalization — shunz / detail
  657. Refactored BCNone integrand for Galerkin manifold to be agnostic of PhysDim — shunz / detail
  658. fixed/refactored a few Galerkin_manifold boundary integands to be agnostic of PhysDim — shunz / detail
  659. Use isotropic implied metric for IsotropicOpt MOESS — galbramc / detail
  660. refactored Galerkin_manifold interior trace integrands to be agnostic of PhysDim — shunz / detail
  661. removed daisy chain in JacobianParam since it could be handled by the primary algebraic equation class's jacobianParam(...) — shunz / detail
  662. removed 3D-specific assertion — shunz / detail
  663. refactored usage of jacobianParam(...) to account for any daisy chain in the primary algebraic equation set — shunz / detail
  664. Refactored daisy-chain/linked list implementation of algebraic equation sets, including auxi equation and proper chained calls to jacobianParam() — shunz / detail
  665. removed redundant daisy-chained calls to setSolutionField() and fillSystemVector() in algebraic equation sets.  Clarified the intended use case of daisy-chained equation set — shunz / detail
  666. Refactored 2D auxi PDE class to prepare panel-IBL2 to use the PhysDim-agnostic auxi equation implementation.  Removed redundant auxi equation set and integrand classes that used to be specialized for Panel2D — shunz / detail
  667. Removed 3D-specific assertion in auxi cell integrand. Fixed IBL2 captured transition system test case — shunz / detail
  668. Cleaned up auxi equation implementation to remove redundant dummy members in FunctionEval class.  Renamed some files & classes — shunz / detail
  669. cannot assign a regular/raw pointer to std::shared_ptr — shunz / detail
  670. Cleaned up 2D auxv equation implementation for XfoilPanel+IBL to remove redundant dummy members in FunctionEval class.  Renamed some files & classes — shunz / detail
  671. cannot assign regular/raw pointer to std::shared_ptr — shunz / detail
  672. Cleaned up 3D auxv equation implementation for flat plate panel+IBL3 to remove redundant dummy members in FunctionEval class — shunz / detail
  673. minor refactoring of XfoilPanel field discretization order checks/assertions — shunz / detail
  674. refactoring (similar to previous ones) to have PDEIBL2D define its parameter field tuple types — shunz / detail
  675. typo fix — shunz / detail
  676. only prints in verbose mode — shunz / detail
  677. fixed system/CodeConsistency tests for IBL — shunz / detail
  678. cleanup and fixes to keep IBL-related implementation up to date — shunz / detail
  679. more cleanup on DG/HDG discretization unit tests, mostly related to IBL — shunz / detail
  680. cleanup & fixes to panel-IBL3 3x3 block discretization unit tests to keep up to date with IBL-related implementation — shunz / detail
  681. removed redundant include — shunz / detail
  682. fixed miscellaneous XfoilPanel+IBL2 aes unit tests to stay up to date with latest IBL implementation — shunz / detail
  683. cleaned up & fixed sandbox cases for XfoilPanel+IBL2D single run and drag polar for airfoil — shunz / detail
  684. miscellanenous fixes of compile error and formatting style — shunz / detail
  685. removed uses of gradqn and q in Neumann and Dirichlet BCs respectively for potential flow — shunz / detail
  686. fixed some compile errors and formatting style — shunz / detail
  687. updated pyrite check files for IBLFourEqn3D to use LF flux without mass correction — shunz / detail
  688. fixed miscellaneous unit tests related to coupled IBL — shunz / detail
  689. fixed FP-IBL3 jacobian ping test — shunz / detail
  690. fixed a few compile errors and warnings related to a few sandbox test cases not up-to-date with latest FullPotential PDE/BC implementation — shunz / detail
  691. renamed class & files. re-org include.  started a LIP+IBL3 sandbox case by copying over FP-IBL3 — shunz / detail
  692. allows FP-IBL3 jacobian ping test to run longer on Jenkins — shunz / detail
  693. fixed unit test of auxv aes for 3D full potential — shunz / detail
  694. Reverted some changes in the use of LIP BCs.  These changes should NOT have been made — shunz / detail
  695. relocated a unit test to IBL folder — shunz / detail
  696. passed a few ping tests related to coupled IBL3 — shunz / detail
  697. fixed two unit tests troubled by misuse of MPI communicator — shunz / detail
  698. refactored some explicit instantiations for better generality and less tedious code — shunz / detail
  699. use MatrixS_or_T instead of MatrixS to account for the case of MatrixQ=Real — shunz / detail
  700. relaxed time limit for a block jacobian ping test on Jenkins.  trying to fix an undefined reference error by altering the order of loading lib in CMakeLists — shunz / detail
  701. rename/reorg files/classes to remove FullPotential 3D specificity from Auxv equation implementation — shunz / detail
  702. Relocated Matrix PDE_Qauxi typedef into PDE class in lieu of integrand class — shunz / detail
  703. Looks like Jenkins censored the previous commit msg cuz it contains the word 'e-r-r-o-r'. Amend the commit msg now. relaxed time limit for a block jacobian ping test on Jenkins.  trying to fix an undefined reference e-r-r-o-r by altering the order of loading lib in CMakeLists — shunz / detail
  704. make a method protected as it is not a necessary API for mitLG BC — shunz / detail
  705. Add comments.  Make basis functions class members to reduce re-allocating memory during operator calls — shunz / detail
  706. Refactored LIP PDE to prep it to be run with coupled IBL3.  Added Dirichlet_mitLG BC for LIP — shunz / detail
  707. relaxed machine precision level tolerance in a unit test for intel compiler to pass — shunz / detail
  708. Replaced tedious & repetitive block matrix instantiation statements with macro definitions. Added explicit instantiations for MatrixBlock_4x4 for LIP-IBL3 coupling — shunz / detail
  709. Replaced tedious & repetitive block matrix instantiation statements with macro definitions. Added explicit instantiations for MatrixBlock_4x4 for LIP-IBL3 coupling — shunz / detail
  710. fixed some lingering merge conflicts — shunz / detail
  711. fix no-return warnings in a function with non-void return type — shunz / detail
  712. refactored miscellaneous unit tests. added missing explicit instantiation for 4x4 block matrix — shunz / detail
  713. added option of Dirichlet_mitLG for LIP test --> result matches LinearScalar_sansLG, so not need bother with mitLG — shunz / detail
  714. fix missing return statement issue — shunz / detail
  715. minor cleanup — shunz / detail
  716. add state validity check assertions for Auxv projection integrand class — shunz / detail
  717. refactored LIP BC and PDE to enable coupled LIP-IBL3 test case to run — shunz / detail
  718. simply renamed some variables for brevity — shunz / detail
  719. speed up LIP-IBL3 run by initializing with Falkner-Skan solution and solving IBL3 in uncoupled mode — shunz / detail
  720. make IBL3 LF vs Full upwind flux choice a runtime decision — shunz / detail
  721. fix typos that caused compile errors — shunz / detail
  722. add unit tests to 4-equation 3D IBL PDE — shunz / detail
  723. add explicit instantiation — shunz / detail
  724. set minimum IBL output field order to be 1 — shunz / detail
  725. add/refactor explicit instantiations — shunz / detail
  726. fixed issues with uninitialized data in boundary integand, which became a problem due to recent refactoring to 3D LIP BC (i.e. swtich from assignment to cumulation in data(...)).  Some other fixes to compile warnings — shunz / detail
  727. Implementing N wave problem for Burgers using Advection Diffusion — cwomack / detail
  728. Removed one variable. — cwomack / detail
  729. Tried a few more duct geometries for IBL3 — shunz / detail
  730. fix for messed up merge conflict — allmaras / detail
  731. fix typo in comments — shunz / detail
  732. fix for messed up merge conflict — allmaras / detail
  733. Added Darmofal changes to Nwave code. — cwomack / detail
  734. added checks on SANS_AVRO and SANS_REFINE — allmaras / detail
  735. More changes — cwomack / detail
  736. Changed OutputNDConvert to match Dave's — cwomack / detail
  737. add a manifold (area) grid based on four sides of a box that form a ring — shunz / detail
  738. Added deanna.sewell@colorado.edu to DeveloperEmailAddresses — deanna.sewell / detail
  739. add to unit tests of BoxBoundaries grid (duct ring) — shunz / detail
  740. reverted OutputCell_SolutionErrorSquared to its former functionality (input is Real/VectorS, — allmaras / detail
  741. Added mitStateSpaceTime BC for 1D Advection Diffusion — cwomack / detail
  742. sans-Lagrange adiabatic & isothermal no-slip BCs for NS — allmaras / detail
  743. relaxed tolerance on unit test — allmaras / detail
  744. modified speedCharacteristic for AD with zero advective flux — allmaras / detail
  745. refactoring of BoxBoundary grid: group indexing and area_cell to volume_boundary mapping — shunz / detail
  746. add a test case of LIP-IBL3 for IBL3 on a duct ring (i.e. 4 side walls of a box) — shunz / detail
  747. added sans-Lagrange no-slip BC types to 2D NS — allmaras / detail
  748. MatrixS_MatMul instantiations needed for sans-Lagrange no-slip BCs for NS — allmaras / detail
  749. Explicitly only use one OpenMP thread for PETSc with MPI — galbramc / detail
  750. mat-mul needed for sans-Lagrange no-slip BCs for NS — allmaras / detail
  751. minor refactoring — shunz / detail
  752. added IO files for sans-Lagrange no-slip BCs for NS — allmaras / detail
  753. playing with laminar and turbulent cases for LIP+IBL3 — shunz / detail
  754. minor cleanup — shunz / detail
  755. Turned off full jacobian ping test for 3-eq IBL Quad.  Also some minor clean. — shunz / detail
  756. Correction to last commit message: should be "Turned ON full test" — shunz / detail
  757. changes to HDG FieldWeighted integral for sans-Lagrange no-slip BCs for NS; note — allmaras / detail
  758. Added deltaRef for body force viscous terms — galbramc / detail
  759. some cleanup on panel-IBL3 sandbox case — shunz / detail
  760. Add missing includes — galbramc / detail
  761. Forgot a file — galbramc / detail
  762. Separate constant and quadratic body force viscous terms — galbramc / detail
  763. fixed compile error and warning — shunz / detail
  764. Turned on full jacobian ping test for coupled panel+IBL3 (3-eq) — shunz / detail
  765. Turned on more jacobian ping test — shunz / detail
  766. Fix link error — galbramc / detail
  767. Fix Newton iteration separator — galbramc / detail
  768. Update unit test — galbramc / detail
  769. refactored panel-IBL3 case running setup — shunz / detail
  770. Output IBL results of mass defect flux in lieu of dummy output of qz_X — shunz / detail
  771. bug fix: consistent definition of w and b fields in FieldWeighted — allmaras / detail
  772. Refactored sandbox case setup: panel-IBL3, LIP-IBL3 — shunz / detail
  773. Forgot to suppress one output — galbramc / detail
  774. Return results from Constrained body force solver — galbramc / detail
  775. fix style — shunz / detail
  776. refactor and unit test Auxv equation for 3D flate plate panel — shunz / detail
  777. minor cleanup — shunz / detail
  778. Refactor Auxv equation of 3D flat plate panel method to allow for CG p1 qauxvfld for better DOF efficiency — shunz / detail
  779. Fix bug in deltaRef reduction process — galbramc / detail
  780. fix warning messages — allmaras / detail
  781. minor cleanup — shunz / detail
  782. bug fix: 3D panel method with triangle panels was computing panel area wrongly by double-multiplying reference area.  Added unit tests for this panel method — shunz / detail
  783. fix compile errors caused by typos and lag behind previous  refactoring — shunz / detail
  784. fix style for Vera check — shunz / detail
  785. minor cleanup of sandbox case — shunz / detail
  786. more warning messages — allmaras / detail
  787. fix warnings: comparing int and size_t in for loop — shunz / detail
  788. relaxed tolerance for intel — shunz / detail
  789. fix duplicated BOOST test suite names — shunz / detail
  790. Allow for no-wall distance functions — galbramc / detail
  791. Support 3D Q2 meshes with libMeshb — galbramc / detail
  792. changed full upwind back to using momentum flux correction by default — shunz / detail
  793. Fix warning — galbramc / detail
  794. More changes to get Nwave boom propagation working — cwomack / detail
  795. Redid unit test for nwave — cwomack / detail
  796. Use KSPGMRESModifiedGramSchmidtOrthogonalization which is slower but more stable — galbramc / detail
  797. Format fix — galbramc / detail
  798. Relax tolerance — galbramc / detail
  799. fixed undefined symbol/linking errors.  static const member needs to be define in cpp, strictly speaking.  clang compiler was rigorous enough to catch this, although gnu lets it pass... — shunz / detail
  800. fixed compile warnings about comparing int and unsigned int — shunz / detail
  801. First attempt at extracting Profile Loss for body forces — galbramc / detail
  802. add unit tests for better coverage — shunz / detail
  803. Forgot to update checkInputs — galbramc / detail
  804. More profile loss fixes — galbramc / detail
  805. Use Yuankang Chen data fit value for body force delta**2 term — galbramc / detail
  806. Fixes for profile loss — galbramc / detail
  807. Cppcheck suppressions and Profile loss computed at constant radius — galbramc / detail
  808. One more try at profile loss — galbramc / detail
  809. just renaming — shunz / detail
  810. Start removing perturbed stuff — galbramc / detail
  811. cppcheck fix and suppression — galbramc / detail
  812. clang analyzer fixes — galbramc / detail
  813. Fix cppcheck suppression — galbramc / detail
  814. add derivative calculation for IBL3 laminar eigen-analysis — shunz / detail
  815. More cppcheck fixes — galbramc / detail
  816. More body force output functionals — galbramc / detail
  817. switched to constant density gas model for IBL — shunz / detail
  818. Remove lienar VMSD and perturbed functions — galbramc / detail
  819. Relax tolerance — galbramc / detail
  820. added sansBOOM PDE directories; added standard atmosphere — allmaras / detail
  821. Remove _NL VMSD suffix — galbramc / detail
  822. Relax timing — galbramc / detail
  823. fixed vera squawk — allmaras / detail
  824. refactoring to to keep up with the constant-density gas model in IBL3 — shunz / detail
  825. Enable output functionals on BodyForce LE/TE surfaces — galbramc / detail
  826. Fix body force relative output functionals — galbramc / detail
  827. Relax tolerance — galbramc / detail
  828. Realxer tolerance — galbramc / detail
  829. more refactoring to to keep up with the constant-density gas model in IBL3 — shunz / detail
  830. Turbulence model constructor and unit test formatting changes. Functional SA-Catris models and framework for SA-LRe and SA-R models as well. — waligura / detail
  831. minor compile error/warning fix — shunz / detail
  832. Pulling in updates for the asymptotically consistent error estimate in VMSD. PDEs have gained an additional typedef, the type of the consistent part of the PDE. This is just the PDEs type for almost all PDEs. New PDE types have been added for using the asymptotic consistency correction for Euler/NS/RANSSA with sensor based artificial diffusion (the originals have been retained for the time being). Updates to the problem interface and the error estimation classes for VMSDBR2 have also been made. Using the asymptotically consistent correction requires some additional data, but the interface for problems not needing that functionality are unchanged. — blsc / detail
  833. updated pyrite files — shunz / detail
  834. Cleaned up AVSensor_Source2D.h a little bit to remove some unused code. — blsc / detail
  835. Missed vera warning — blsc / detail
  836. Forgot to turn off verbose and file output — shunz / detail
  837. Missed another vera warning — blsc / detail
  838. relaxed tolerance — shunz / detail
  839. Fix so 2D avro works for wirebody — galbramc / detail
  840. Added a N-S case of laminar BL — shunz / detail
  841. Fixed the remaining clang and gnu11 compiler warnings. — blsc / detail
  842. cleaned up NS laminar BL sandbox case — shunz / detail
  843. Separated findElement() function into a dedicated file — shunz / detail
  844. Refactored findTraceElement to use simple bounding box check without resorting to the kd-tree hammer...  Added unit test — shunz / detail
  845. Refactor Homotopy so it can be used with any PDE — galbramc / detail
  846. Fix warnings — galbramc / detail
  847. Expose Viscous body force coefficients as user inputs — galbramc / detail
  848. Nightly fixes — galbramc / detail
  849. Added BL profile extraction capability to a NS sandbox case — shunz / detail
  850. Refactored 3D Tet flat plate grid.  Added mutable access to AES in solver interface (but only able to use it by commenting out exception).  More refactoring to NS laminar BL sandbox case — shunz / detail
  851. minor cleanup of sandbox case — shunz / detail
  852. fixed warnings: size_t vs int — shunz / detail
  853. turned off projection between different grids when doing solution sequencing because it does not work due to (probably) a bug... — shunz / detail
  854. Fix mistake in body force — galbramc / detail
  855. Change some QCR variable types in PDERANS and other formatting changes for successful make check. Updated PDERANS and b_test to be consistent with current changes on develop — waligura / detail
  856. fixed warnings: size_t vs int — shunz / detail
  857. bug fix in user input — shunz / detail
  858. fixed style. minor tweak in PETSc setup in a test case — shunz / detail
  859. Refactored grid and test case for NS LamiBL — shunz / detail
  860. Changes to diffusionViscous and diffusionViscousGradient unit tests to check Catris variations. Still working on the formatting but will push this version for now — waligura / detail
  861. Pushing again with vera changes. Something seems to be up with my vera check — waligura / detail
  862. Another vera message I did not see before sending — waligura / detail
  863. Relaxed convergence tolerance in a test case — shunz / detail
  864. Further formatting changes to PDERANS and another vera error I missed initially — waligura / detail
  865. Further formatting changes fixing most of the alignment issues and getting rid of the -= — waligura / detail
  866. Refactored BL sampling function in NS LamiBL test case — shunz / detail
  867. Add ddelta dump for RotorSource — galbramc / detail
  868. Fix warning — galbramc / detail
  869. Working Changes: Finalized AD Burgers test case for boom propagation — cwomack / detail
  870. Small cleanup — galbramc / detail
  871. Remove output_grm — galbramc / detail
  872. Wording changes to SATurbModel and shortening of nonc variables — waligura / detail
  873. Fixed long line.  Separated functions into a cpp file — shunz / detail
  874. Fixed compile and linker errors in findTraceElement(...) — shunz / detail
  875. Added support for S-shaped duct geomerty in flat plate grid in 3D — shunz / detail
  876. adding in the first go at untest SA_R and SA_LRe modifications for 2D. Also making sure all pushes are going through before moving on. — waligura / detail
  877. fixed file I/O mode — shunz / detail
  878. added check for file I/O — shunz / detail
  879. Added a sin duct geometry for IBL3 sandbox case — shunz / detail
  880. Initial commit of sansBOOM PDE implementation with the advective and viscous terms defined — darmofal / detail
  881. refactored Flux_mitState BC implementation for IBL3 to use fluxNormal() instead of evaluating it in the integrand class — shunz / detail
  882. Minor fixes for artificial viscosity — galbramc / detail
  883. Turned on mitLG Dirichlet BC for LIP-IBL3 case at inlet.  Fixed buggy isValidState check that checks uninialized boundary state qB — shunz / detail
  884. Initial implementation of sansBOOM BCs and Adapt2D_DGBR2_sansBOOM_toy — darmofal / detail
  885. Forgot to commit a few lines — shunz / detail
  886. Some more edits to sansBOOM PDE/BC implementation — darmofal / detail
  887. Changed default xtr parameter in IBL transition model from max Real (causing floating point overflow error) to 1e5 — shunz / detail
  888. Fixed (1) division by zero in cut-cell natural transition and (2) unit test for default xtr value — shunz / detail
  889. Still not compiling.  Pushing to allow Marshall to look at N=1 issue — darmofal / detail
  890. Initializing a variable in jacobianFluxViscous correctly — waligura / detail
  891. Allow PDE to use ArrayQ = VectorS<1,T> — galbramc / detail
  892. Homotopy dict fixes — galbramc / detail
  893. Final changes to LocalLaxFriedrichs1D flux function and AD Burgers toy — cwomack / detail
  894. Remove GLPK — galbramc / detail
  895. Missed one — galbramc / detail
  896. Pushing current version of sansBOOM to repo — darmofal / detail
  897. Enable 3D sourcePositivity for NS and RANSSA — galbramc / detail
  898. Most recent mods to sansBOOM implementation — darmofal / detail
  899. Removed changes to Lagrange Triangle — cwomack / detail
  900. Fix compile error — galbramc / detail
  901. Fixed Robin boundary condition for Euler/NS/RANSSA with sensor equation. Updated unit tests to reflect fix. — blsc / detail
  902. Compile fixes — galbramc / detail
  903. Another compile fix — galbramc / detail
  904. Corrected Vera errors — cwomack / detail
  905. More compile fixes — galbramc / detail
  906. Fix consistency test — galbramc / detail
  907. Modified Discretization unit tests to be consistent with linesearch — cwomack / detail
  908. Removed unused variable and changed abs -> fabs — cwomack / detail
  909. Fix parallel HField calculations. Fix couchmanMatrix for RANS. Cleanup Homotopy. Add the abilty to only get possessed DOF even for Statically Condensed systems. — galbramc / detail
  910. Fix compile errors — galbramc / detail
  911. Added updated VMSDBR2 projection. Default is off. To turn on define USE_FULLSPACE_PRJECTION_METHOD_2 at the top of your sandbox case. — blsc / detail
  912. sansBOOM PDE, BC, Output implementation for DGBR2 with advection and diffusion terms — darmofal / detail
  913. Adding two generalized cases to the sandbox to deal with gaps in avro use and SA RANS for adiabatic and isothermal flows. Will be good to keep these consistent with future homotopy and RANS changes — waligura / detail
  914. Removing flatplate xfld mesh option — waligura / detail
  915. removing xfield definition in supersonic case too — waligura / detail
  916. Fixed some missing instantiations needed for sansBOOM — darmofal / detail
  917. A couple more instantiations added... this time because the intel compiler was complaining (though the other compilers were fine... ARGH) — darmofal / detail
  918. Adjusting slightly tolerance on unit tests — darmofal / detail
  919. Updates to BDF time marching to allow ramping of integration order to provide the needed order-dependent past data — deanna.sewell / detail
  920. Modified line search test and removed residual dat file — cwomack / detail
  921. Cleanup BCmitAVsensor — galbramc / detail
  922. Forgot new files — galbramc / detail
  923. Allow Homotopy to use pre-defined BCVectors — galbramc / detail
  924. Make AVSensor_Source_VMSD_SPD consistent between 2D and 3D — galbramc / detail
  925. Fix compile errors — galbramc / detail
  926. vera fix — galbramc / detail
  927. Fix test for parallel — galbramc / detail
  928. Cleanup file dump — galbramc / detail
  929. Use Metric to compute HField_DG instead of size/perimiter — galbramc / detail
  930. Add ResidualNorm_InvJac_DOF_Weighted to VMSDBR2 — galbramc / detail
  931. Revert last change — galbramc / detail
  932. Fix compile error, and more verbose assertion — galbramc / detail
  933. Update unit tests — galbramc / detail
  934. Another unit test update — galbramc / detail
  935. Add ImpliedMetric for Line 2D element. — galbramc / detail
  936. Fix unit test — galbramc / detail
  937. Use SANS_CHECK_CLOSE — galbramc / detail
  938. Remove Burgers PDE — galbramc / detail
  939. Add dict function to DictKeyPair — galbramc / detail
  940. Added Axisymmetric DBL scalar function in 2D with unit tests — cwomack / detail
  941. Added vera exclusion for ScalarFunction2D — cwomack / detail
  942. Updates to sansBOOM including improved IC implementation including ability to read nearfield from a file and also more unit tests — darmofal / detail
  943. Compressible mechanical power calculation — galbramc / detail
  944. Missing a newline at end of ICsansBOOM.cpp.  Fixed. — darmofal / detail
  945. Added Axisymmetric flux functions + unit tests — cwomack / detail
  946. Missing a return statement — darmofal / detail
  947. Found sign error in upwind flux in sansBOOM. — darmofal / detail
  948. Fix compile error and warnings from new clang on macOS — galbramc / detail
  949. Relax tolerance — galbramc / detail
  950. Another warning fix — galbramc / detail
  951. A few more warning fixes — galbramc / detail
  952. More warning fixes for new clang — galbramc / detail
  953. One more warning fix — galbramc / detail
  954. Remove boost libary from external and add it to gitignore — galbramc / detail
  955. More cleanup — galbramc / detail
  956. Mechanical power correction — galbramc / detail
  957. Another mechanical power correction — galbramc / detail
  958. Remove Sensor template from AVSensor_Source3D_PressureGrad — galbramc / detail
  959. Fix compile error — galbramc / detail
  960. Return delta's for both LE and TE edges for BodyForces — galbramc / detail
  961. Add Deviation Angle Square output function for Body Forces — galbramc / detail
  962. Missing include — galbramc / detail
  963. More compile fixes — galbramc / detail
  964. Fix compile warnings — galbramc / detail
  965. Revert MechanicalPower calculation. Fix InteriorTrace partitioning for JacobianFunctionalInteriorTrace. Fixes for body force optimization. — galbramc / detail
  966. Use consistent limited gradients in PrimitiveSurrogate_btest — galbramc / detail
  967. Fix warnings — galbramc / detail
  968. Verbose output for computing BodyForce gradients — galbramc / detail
  969. Compile fix for using grid laplacian — galbramc / detail
  970. Fix PETSc/TAO deprecation warnings — galbramc / detail
  971. Update to supersonic test case — waligura / detail
  972. Working supersonic case for develop — waligura / detail
  973. Try again to see if tests time out — waligura / detail
  974. Add CompressiblePower calculation — galbramc / detail
  975. Additional unit tests for new sensor with RANS. Found and fixed a few bugs in PDERANSSA2D and PDEEuler3D. Cleaned up solver interface for VMSD-BR2 somewhat. More unit tests and tidy up to come. — blsc / detail
  976. Add another quadratic viscous term to Body Force model — galbramc / detail
  977. Updated surface flux writer for tecplot (VMSDBR2 specific). Added developer exceptions in to the Euler with artificial diffusion space-time calls since they're not unit tested. — blsc / detail
  978. Add 8th order term to Body Forces — galbramc / detail
  979. Added the ability to specify is artificial diffusion should be applied to SA equation at run time. More unit tests. Caught a few more bugs. — blsc / detail
  980. More BodyForce output functionals — galbramc / detail
  981. Add vera exclusions — galbramc / detail
  982. Warning fixes — galbramc / detail
  983. Properly ignore ._ files in CMake — galbramc / detail
  984. Missing override keyword in SolverInterface_VMSD_BR2. ErrorOrder_2D_VMSDBR2_Triangle_AD_btest runs in serial (communicator is split and each rank runs independently). — blsc / detail
  985. One more warning fix — galbramc / detail
  986. Warning shows up in GNU 8 — galbramc / detail
  987. Fix warning — galbramc / detail
  988. Relax tolerances for intel — galbramc / detail
  989. needsSolutionGradient set to true for EntropyPower functional — galbramc / detail
  990. Add Entropy to rotor output — galbramc / detail
  991. Updated tolerance for intel in AVSensor_Source3D_Euler_btest — blsc / detail
  992. Fix EntropyPt calculation. Remove old Euler3D source test. — galbramc / detail
  993. Relax tolerances for intel — galbramc / detail
  994. More relaxed intel tolerances — galbramc / detail
  995. One more method for VMSD data transfer — galbramc / detail
  996. Stabilized output for PV functional — galbramc / detail
  997. First draft of Axisymmetric DBL problem, vera not working, may require multiple commits to get through jenkins — cwomack / detail
  998. Fixed scope issues — cwomack / detail
  999. Removed untested upwind option from isothermal walls in PDENavierStokes2D. It did not seem to be being used by any sandbox case or test. — blsc / detail
  1000. fixed vera errors — cwomack / detail
  1001. Actually remove the code related to the upwind flag. — blsc / detail
  1002. added output axisymmetric unit tests — cwomack / detail
  1003. Changed unit test tolerance — cwomack / detail
  1004. Generalized axisym DBL for any z0 z1 — cwomack / detail
  1005. fixed vera errors — cwomack / detail
  1006. Add asymmetric term for rotor source — galbramc / detail
  1007. Fix compile errors — galbramc / detail
  1008. Fix bug in last commit — galbramc / detail
  1009. Cleanup sourcePositivity — galbramc / detail
  1010. Work around more floating point issues — galbramc / detail
  1011. More precision cleanup for AV source — galbramc / detail
  1012. Fogot a file — galbramc / detail
  1013. Allow setting critical surrogate values in 3D — galbramc / detail
  1014. Fix compile error — galbramc / detail
  1015. Compiler error and warning fixes — galbramc / detail
  1016. Make outer diffusion positvity source consisent with inner — galbramc / detail
  1017. Warning and tolernace fixes — galbramc / detail
  1018. Fix compile error — galbramc / detail
  1019. Cleanup 2D PressureGrad sensor — galbramc / detail
  1020. Relax tolerance — galbramc / detail
  1021. Missed one — galbramc / detail
  1022. Missed one more — galbramc / detail
  1023. Relax tolerance — galbramc / detail
  1024. Consistent 3D positvity source with Ben's thesis — galbramc / detail

#1507 (Apr 23, 2022, 10:25:09 PM)

  1. Compile error fix — galbramc / detail
  2. Warning fixes — galbramc / detail
  3. refactored IBL3 LF flux dissipation coefficient to avoid zero stabilization in the case of qe be tangent to element interface — shunz / detail
  4. turned on mass jump for 3D IBL3 4-eqn's LF flux: providing stabilization for flow transition (checked on ZPG flat plate transition case) — shunz / detail
  5. removed outdated closure models for 4-eqn IBL3 laminar flow — shunz / detail
  6. removed includes of outdated closure models — shunz / detail
  7. mucked with 4-eqn IBL3 on flat/torpedo case — shunz / detail
  8. intermediate commit...mucking with a sandbox case — shunz / detail
  9. added PDE functions needed for CG (GLS); most are non-functional and throw developer — allmaras / detail
  10. added verbose switch to turn on extra output for local solves; hard-coded to false — allmaras / detail
  11. instantiations needed for CG space-time of two-phase porous media — allmaras / detail
  12. made ctors more consistent with DG-BR2; needed for CG space-time two-phase — allmaras / detail
  13. fixed param builder call; code cleanup on BOUNDARY_INTEGRAL #ifdef — allmaras / detail
  14. minor tweak to verbose output — allmaras / detail
  15. mpi bug fix for verbose solution/jacobian dumps — allmaras / detail
  16. added VMSD and unstabilized CG test cases for benign 2D space-time two-phase; — allmaras / detail
  17. added diagnostics to SANS_ASSERT check — allmaras / detail
  18. Enable AFLR BL meshes — galbramc / detail
  19. added knob for controling added dissipation in LF flux for IBL3 — shunz / detail
  20. minor refactoring — shunz / detail
  21. Add PETSc numerica factorization time. Fix warning. Fix AFLR test. — galbramc / detail
  22. make IBLVarDataType3D templated, to allow for both Real and Surreal etc. — shunz / detail
  23. added symmetry (i.e. no crossflow) BC for 4-eqn IBL3 — shunz / detail
  24. refactored conservative variables, which is the sames as the previous version for incompressible flow — shunz / detail
  25. scaled ke and lc eqns by 1/qe^2, but it didn't fix the symmetry plane instability — shunz / detail
  26. added an exception for stagnation point in IBL3 4-eqn formulation — shunz / detail
  27. Added flag to choose whether to include the sensor equation in the residual calculation and convergence checks — blsc / detail
  28. Removed default parameters in PDEmitAVSensor constructors associated with including the sensor equation in the residual calculation — blsc / detail
  29. added easier macro toggle for turning on/off amp+lag equations — shunz / detail
  30. fix formatting — shunz / detail
  31. add exception for corner case — shunz / detail
  32. minor refactoring of torpedo case for IBL3 in sandbox — shunz / detail
  33. added but commented out a hack for trying power-law crossflow velocity distribution — shunz / detail
  34. added BC dict missing from a previous commit.  minor cleanup of 4-eqn IBL3 stuff — shunz / detail
  35. updated H22 turb closure — shunz / detail
  36. Add Kyle Anderson 'boosting', but dissabled for now — galbramc / detail
  37. Add rotor source tecplot dump — galbramc / detail
  38. test fix: added required Dirichlet data for PyDict — allmaras / detail
  39. added PyDict option for including viscous fluxes in BCNone (default = false, no viscous fluxes); — allmaras / detail
  40. corrected PDE/BC dump files — allmaras / detail
  41. Forgot a file — galbramc / detail
  42. Fix segfault — galbramc / detail
  43. Fix bug in lean for camber blade — galbramc / detail
  44. Add quadratic camberline — galbramc / detail
  45. Upgrade intel compiler — galbramc / detail
  46. Add some instantiations — galbramc / detail
  47. Update MKL path for Intel oneAPI — galbramc / detail
  48. Added Space Time Case — jta29 / detail
  49. Fixes for sansLIPAIM — galbramc / detail
  50. reverted turbulent Cf1 and Hs1 closure to 2D — shunz / detail
  51. minor tweaks/comments — shunz / detail
  52. Started another set of turbulent closure models by copying over existing ones — shunz / detail
  53. added turb Cf1 closure — shunz / detail
  54. added turb H*1 closure — shunz / detail
  55. Updated Insantiation — jta29 / detail
  56. updated CDc closure — shunz / detail
  57. updated turb Cf2 closure — shunz / detail
  58. updated turb Hc2 closure — shunz / detail
  59. fixed function signature — shunz / detail
  60. fixed typo in function call. switched default to using new regularized turb closure — shunz / detail
  61. switched back to using 2D turb H*1 closure — shunz / detail
  62. Remove trailing white space — jta29 / detail
  63. Removed trailing white space — jta29 / detail
  64. added output of closure model derivatives for IBL3 flux system eigen-analysis — shunz / detail
  65. fixed line-length squawk — allmaras / detail
  66. Minor cleanup — galbramc / detail
  67. Fix instantiations — galbramc / detail
  68. made PyDict required parameter in ctor; moved discretization/stabilization parameter — allmaras / detail
  69. made SolutionData* unit tests consistent with ctors — allmaras / detail
  70. made sandbox codes consistent with changes to SolutionData*: (a) PyDict parameter — allmaras / detail
  71. removed new unit test (committed too soon) — allmaras / detail
  72. fixed unused variable squawk — allmaras / detail
  73. moved stabilization parameter next to PDE consistent with SolutionData* — allmaras / detail
  74. move stab parameter in SolutionData call — allmaras / detail
  75. made system tests consistent with SolutionData* — allmaras / detail
  76. removed duplicate look-up filename definitions — allmaras / detail
  77. added required PyDict() argument to SolutionData* — allmaras / detail
  78. removed CG two-phase test case (will bring it back later) — allmaras / detail
  79. making file name conventions consistent: "Galerkin_Stablized" is anything involving — allmaras / detail
  80. line length squawk — allmaras / detail
  81. Nightly fixes — galbramc / detail
  82. fixed some "_Stabilized" typos; removed unused includes from VMSD toys — allmaras / detail
  83. fixed "_Stabilized" typos — allmaras / detail
  84. fixed constructor bug for var args; now all ctors are consistent in "BCArgs&&... args" — allmaras / detail
  85. Fix SANS_Commit script — galbramc / detail
  86. Fix warning — galbramc / detail
  87. Correct Brenner AV in 2D and add 3D — galbramc / detail
  88. Arrary bound fix — galbramc / detail
  89. Warning fixes and relax nightly tolerance — galbramc / detail
  90. Don't try to use solutions from diverged linear solver — galbramc / detail
  91. added second generalized-H tensor that gives M-type grid Laplacian; it is the — allmaras / detail
  92. added second path that assumes incoming H field is same as original H^2 (computed — allmaras / detail
  93. added second path that assumes incoming H field is J*J^t (computed — allmaras / detail
  94. uncommented scaleArtificialViscosity function needed for Homotopy; added unit tests — allmaras / detail
  95. fixed scalar-h code for 1D; clean-up for 2D/3D — allmaras / detail
  96. added prescribed CD(x,y) field — shunz / detail
  97. Various small cleanups — galbramc / detail
  98. added optional vertex coordinates for single triangle/tet constructors — allmaras / detail
  99. Update unit tests — galbramc / detail
  100. Missed one — galbramc / detail
  101. Added prescribed CD field for inversion of CDiss correction factor beta — shunz / detail
  102. Encapsulate regularization constants in one header — hcarson / detail
  103. style ding — hcarson / detail
  104. minor tweaks of torpedo case IBL3 setup — shunz / detail
  105. Dump out unconverged restart files — galbramc / detail
  106. Dump out unconverged restart files — galbramc / detail
  107. Added lines for extracting final qfld — hcarson / detail
  108. Add AV to SA equation in 3D — galbramc / detail
  109. Fix surreal type — galbramc / detail
  110. Fix surreal type — galbramc / detail
  111. Mucking with a correction multiplier term to the dissipation relation — shunz / detail
  112. fixed long lines — shunz / detail
  113. Update test for previous commit — galbramc / detail
  114. mucking with dissipation relation inversion — shunz / detail
  115. Use MKL_PARDISO for PETSc DirectLU solver — galbramc / detail
  116. Only use one thread for DirectLU MKL_PARDISO — galbramc / detail
  117. move the PETSc solve time print — galbramc / detail
  118. Add PETSc option to scale by diagonal — galbramc / detail
  119. Added but commented out hacks with inflow BC bump/step features — shunz / detail
  120. Added a few prescribed CD(x,y) field based on RANS data — shunz / detail
  121. fillSystemVector syncs MPI DOF. Fix Sensor symmetry BC for 3D. More parallel testing with NaN's — galbramc / detail
  122. added new beta closure — shunz / detail
  123. Fix compile errors — galbramc / detail
  124. Fix compile errors — galbramc / detail
  125. Refactor isValidState checks in parallel — galbramc / detail
  126. Compile fix — galbramc / detail
  127. One more isValidState fix — galbramc / detail
  128. Add positive preserving source for 3D. Dissabled for now. — galbramc / detail
  129. Compile fix — galbramc / detail
  130. Add some asserts to 'Node Rank' for xfld tecplot dump — galbramc / detail
  131. adding curvilinear transformation functionality — ursachi / detail
  132. missed some files — ursachi / detail
  133. Also dump out xfld spirit — galbramc / detail
  134. Add set_dot and continuously relax sewFace tolerances for CamberBlade LE and TE surfaces. — galbramc / detail
  135. Format fix — galbramc / detail
  136. Fix the last fix — galbramc / detail
  137. Actually fix the fix of the last fix for the previous fix — galbramc / detail
  138. Add UpdateFraction to Galerkin Stabilized — galbramc / detail
  139. Added macro to toggle the use of prescribed CD(x,y) field — shunz / detail
  140. Allow MaxChangeFraction to work with SteveLogic — galbramc / detail
  141. Skip zombie DOF for UpdateFraction check — galbramc / detail
  142. fixed outdated class template argument — shunz / detail
  143. More fixes to allow UpdateFraction with SteveLogic — galbramc / detail
  144. Don't mix units — galbramc / detail
  145. fixed more outdated class template argument — shunz / detail
  146. Fix unit tests — galbramc / detail
  147. EmbeddedCGField fixes — galbramc / detail
  148. Fix one more missing EmbeddedCGField — galbramc / detail
  149. Updated Bernstein bases for use in CG fields. We dont have Hessians implemented, so stabilized CG needed a change to only calculate Hessians if we have stabilization turned off. To go above p3 in 3D CG, we need to change the basis functions to be match our implied ordering. Since Bernstein polynomials are modal and not hierarchical, we need to solve a linear system to do projections between orders. — blsc / detail
  150. Fixed unit tests.  Turned off the correction when ctau surpasses ctau_Tinit in 3D IBL_foureqn — shunz / detail
  151. Added 4D Bernstein bases (linear) on pentatope, with CG and DG fields — blsc / detail
  152. updated pyrite files for IBL3 four eqn laminar — shunz / detail
  153. fixed undefined references — shunz / detail
  154. git was not happy about the commit message...trying to fix it here..this commit is about adding definition of static class members in cpp file — shunz / detail
  155. added transformation function to ghost boundaries — ursachi / detail
  156. added test case — ursachi / detail
  157. cleaned up test case — ursachi / detail
  158. Adding adapt case with P1 corner singularity divergence weirdness. P2 and 3 are fine, but P1 error blows up 4 orders of magnitude.... — hcarson / detail
  159. Update tolerances on L2 project tests for Bernstein bases. Fix NaN issue with auxiliary problem for Homotopy. — blsc / detail
  160. Update tolerances for intel — blsc / detail
  161. Add Lagrange Node tecplot dump for CG fields — galbramc / detail
  162. Fix last commit — galbramc / detail
  163. added PyDict parameter (StatusOKatMaxIterations) to change status when solver hits — allmaras / detail
  164. Updated tecplot CG dump — galbramc / detail
  165. Compile fix — galbramc / detail
  166. added annotation — shunz / detail
  167. Allow zero bodies in a model — galbramc / detail
  168. Add Cylindrical system for Coles profile — galbramc / detail
  169. Maybe compile fixes — galbramc / detail
  170. Fix CG tecplot dump — galbramc / detail
  171. Default coordinate system for Coles profile — galbramc / detail
  172. intermediate commit in case of ACDL power down. sandbox still should not compile yet — shunz / detail
  173. 1st try at 3D NS/RANS no-slip isothermal/adiabatic BCs via Robin sans-Lagrange — allmaras / detail
  174. added -DUSE_GRID_LAPLACIAN to makefiles in all directories containing files where the #ifdef is used — allmaras / detail
  175. make FieldWeighted consistent with BasisWeighted (mostly involved adding param to PDE calls) — allmaras / detail
  176. replaced hard-coded false to PDE check for including viscous terms in boundary flux — allmaras / detail
  177. instantiations needed for uniform source in sensor PDE for artificial viscosity — allmaras / detail
  178. added #pragma message to all *.h files that use USE_GRID_LAPLACIAN; this will — allmaras / detail
  179. removed explicit #define/#undef USE_GRID_LAPLACIAN from unit tests that use this — allmaras / detail
  180. added Tq & Tg template parameters for sourceTrace — allmaras / detail
  181. added p_ref() function to density model to provide a means of accessing reference — allmaras / detail
  182. changed SANS_ASSERT to SANS_ASSERT_MSG to output message on error — allmaras / detail
  183. fixed typo: D1 -> D2 — allmaras / detail
  184. added PyDict option to specify Dirichlet data for Robin BC for AV; useful for — allmaras / detail
  185. added FieldWeighted unit test for sans-Lagrange Dirichlet BCs for Euler — allmaras / detail
  186. added test for jacobian/metric of an equilateral triangle — allmaras / detail
  187. exact data explicitly provided, rather than determined by do-loop dot product accumulation — allmaras / detail
  188. added unit grid where coordinates of all 4 corners can be input; facilitates making — allmaras / detail
  189. typo fix in unit test — allmaras / detail
  190. Enabled move construction and assignment. — hcarson / detail
  191. Added ability to output a temporary field containing the fully reconstructed p' adjoint — hcarson / detail
  192. Added some more move constructors. — hcarson / detail
  193. turn off clang warnings for '#pragma message' — allmaras / detail
  194. It's not a pointer you idiot. — hcarson / detail
  195. fixed quad order bug and added assert that all quad orders are the same — ursachi / detail
  196. More tecplot dump fixes — galbramc / detail
  197. fixed typo in unit test — allmaras / detail
  198. vera: lines too long — allmaras / detail
  199. Compile fix — galbramc / detail
  200. fixed quadrature bug elsewhere and fixed warnings — ursachi / detail
  201. replace several repeats of explicit pow(*, 2) coding with call to private function — allmaras / detail
  202. new MatrixS matmul instantiations needed for sans-Lagrange Robin BCs of no-slip isothermal NS/RANS 3D — allmaras / detail
  203. fix to test file to actually call the write method — hcarson / detail
  204. added Robin_sansLG to VMSD and VMSD-BR2 — allmaras / detail
  205. Hopefully finally got the link problems fixed — galbramc / detail
  206. Enabled move construction and assignment. — hcarson / detail
  207. Added some more move constructors. — hcarson / detail
  208. Added ability to output a temporary field containing the fully reconstructed p' adjoint — hcarson / detail
  209. refactored 3D box hex grid to allow for arbitrary list of node coordinates — shunz / detail
  210. added DOF count checks in box hex grid — shunz / detail
  211. more #include's for Robin_sansLG BCs — allmaras / detail
  212. added curvilinear transformation and unit tests — ursachi / detail
  213. added missing includes (for std::shared_ptr) — ursachi / detail
  214. added another missing include for std::shared_ptr — ursachi / detail
  215. hopefully final include for shared_ptr — ursachi / detail
  216. fixed cmakefiles — ursachi / detail
  217. added CG field instantiation for IBL3 Qauxv field — shunz / detail
  218. minor annotation — shunz / detail
  219. refactoring to show intention more clearly — shunz / detail
  220. made some fixes for failing tests — ursachi / detail
  221. added/deleted #include's for IntegrandBoundaryTraces; added Robin_sansLG where needed, — allmaras / detail
  222. new MatrixS matmul instantiations needed for Robin_sansLG BCs — allmaras / detail
  223. Trying to fix vera errors — jta29 / detail
  224. fixed spacetime exception — ursachi / detail
  225. minor cleanup — shunz / detail
  226. Add missing USE_GRID_LAPACIAN. Minor PDERANSSA formatting fixes. Fix for Coles RANSSA. — galbramc / detail
  227. Add instantiation — galbramc / detail
  228. Use H instead of H^2 in Robin BCs for AV when USE_GRID_LAPLACIAN is defined. — savithru / detail
  229. Update BCRANSSA3D — galbramc / detail
  230. Fixed missing method for dumping the perturbation field. In the process added many additional move constructors/assignments. Also added an implicit conversion for ElementPair, allowing it to be inserted directly into map/unordered map/set etc. A bunch of small house cleaning tasks too. Deleted explicit constructors that could just be default. — hcarson / detail
  231. quadOrder check shouldn't be done if using TopoD1 — ursachi / detail
  232. Fixing errors — jta29 / detail
  233. updated unit tests for curvilinear transformation — ursachi / detail
  234. accidentally deleted default constructor — hcarson / detail
  235. EVEN MORE MOVE CONSTRUCTORS — hcarson / detail
  236. cleaning up of failing unit tests (mainly changing some — ursachi / detail
  237. forgot to delete something — ursachi / detail
  238. removed unnecessary tecplot dumps — ursachi / detail
  239. another attempt to make jenkins stop complaining, now explicitly — ursachi / detail
  240. UniqueTrace a mutable struct. Immutability doesn't buy anything, and just prevents compiler optimization. Additionally, deleted a large number of unneeded constructors, as the compiler provided versions are better and safer. If you write no code, you can write no bugs! See CPP guidelines rule of zero — hcarson / detail
  241. fixed warning — ursachi / detail
  242. deleted unnecessary stuff and cleaned up some additional warnings — ursachi / detail
  243. adding back the default constructor, something funky happens with default initializer. Also change MatrixS to use stdarray, and then to have the 5 constructors as defaults. — hcarson / detail
  244. Fix RANS BC with Conservative variables. More RANSBC unit tests. Add smoothmin linearization. First attempt at blade optimization. — galbramc / detail
  245. Forgot file — galbramc / detail
  246. Add missing include — galbramc / detail
  247. Missed a file — galbramc / detail
  248. Compile error fixes — galbramc / detail
  249. Missed one — galbramc / detail
  250. added checkInputs calls when setting up transformation function — ursachi / detail
  251. fixed memory issue when assigning qfld DOFs — ursachi / detail
  252. minor addition of annotation — shunz / detail
  253. deleted more unnecessary functions — ursachi / detail
  254. Add EGADS ruled wrapper — galbramc / detail
  255. Fix NormalField linearization. — galbramc / detail
  256. Forgot some files — galbramc / detail
  257. Add vectorization — galbramc / detail
  258. Fix Surreal changes — galbramc / detail
  259. bounding box should search along traces when using transformation even — ursachi / detail
  260. added 3D entropy variables for Euler/NS — allmaras / detail
  261. Fix compile error — galbramc / detail
  262. Fix ruled interface — galbramc / detail
  263. Fix warning — galbramc / detail
  264. Use PTC solve before constrained solve with blade optimization — galbramc / detail
  265. Fix warning — galbramc / detail
  266. Fix uninitialized data. Dissable normal field sensitivity for now. — galbramc / detail
  267. Add missing instantiation — galbramc / detail
  268. Fix BodyForce requiring pProp specified — galbramc / detail
  269. flipped output_stream flag to true (thought this was down with last commit, but not) — allmaras / detail
  270. unit tests for Robin_sansLG BCs for 3D NS — allmaras / detail
  271. Restore DeveloperEmailAddresses — galbramc / detail
  272. lowered tolerance for test — ursachi / detail
  273. Updated nu-max calculation when USE_GRID_LAPLACIAN is defined. Added a default argument to AVSensor_Source2D_TwoPhase to model a constant source term if needed. — savithru / detail
  274. cleaned up and fixed sandbox case on FP for S-shaped duct — shunz / detail
  275. commented out hacks — shunz / detail
  276. Starting to implement BCDataFields by copying over stuff — shunz / detail
  277. added and experimented with BCDataFieldManager class.  Ready to further extend this for BCDataField implementation. — shunz / detail
  278. minor commenting — shunz / detail
  279. minor refactoring before adding BC data field stuff — shunz / detail
  280. Initial prototype of introducing BC data fields into algebraic equation set and instantiations of IntegrandBoundaryTraces — shunz / detail
  281. trying to equip IntegrandBoundaryTrace with BCDataField: succeed in contructor but failed due to preset Integrand type defi in IntegrateBoundaryTrace_Dispatch.dispatch()....now turning off all the hacks, which will be removed in the future — shunz / detail
  282. some tidying up — shunz / detail
  283. hide away to-be-removed stuff/hacks — shunz / detail
  284. Refactored 3D full potential stuff, particularly adding wall transpiration BC.  Start to pave ways for including BC data field in BC class — shunz / detail
  285. Avoid failed solves when optimizing body force blades — galbramc / detail
  286. Fix for last commit — galbramc / detail
  287. Vera fixes — galbramc / detail
  288. Tried wall transpiration in S-duct FP case — shunz / detail
  289. append BC data field to 3D FP wall transpiration BC — shunz / detail
  290. renaming variables for clarity — shunz / detail
  291. Enabled using BC data field by passing it to the BC class.  Tested on full potential 3D case.  Removed previous attempt of trying to let integrand class to own BC data field — shunz / detail
  292. removed code from a previous attempt to implement BC data field — shunz / detail
  293. Change objective return on solve failure for BodyForce optimization — galbramc / detail
  294. refactored BC data evaluation call from element — shunz / detail
  295. Started working on Auxv projection equation for IBL+FP coupling: finished the qauxv component in the projection integrand — shunz / detail
  296. minor refactoring to reduce unnecessary memory allocation — shunz / detail
  297. modulize velocity calculation in 3D FP solver — shunz / detail
  298. removed const reference for interior trace groups member data and made it a copy; — allmaras / detail
  299. added option to return success flag if max number of iterations are reached without converging; — allmaras / detail
  300. added interface for derivedSurfaceQuantity with parameter — allmaras / detail
  301. typo fixes — shunz / detail
  302. Added new 4-variable Qauxv formulation and associated Field instantiations — shunz / detail
  303. Initial work on Auxv equation with 3D FP solver: compiles now but needs to be completed — shunz / detail
  304. Some cleanup on Auxv equation (with 3D FP) residual — shunz / detail
  305. some more cleanup before completing Auxv equation jacobian — shunz / detail
  306. Auxv equation now works for a trivial test case.  Now need to work out volume-surface grid connectivity — shunz / detail
  307. minor cleanup — shunz / detail
  308. minor refactoring/annotation — shunz / detail
  309. Initial work on contructing surface mesh corresponding to a boundary group of volume mesh (BoxHex). TBD: Needs nontrivial testing and interior trace groups — shunz / detail
  310. tweaks — hcarson / detail
  311. Added nontrivial test for Auxv projection from FP solution — shunz / detail
  312. minor typo fix in comments — shunz / detail
  313. Added interior trace elements to the boundary surface mesh of BoxHex.  Tried/verfified solving IBL3 on this surface mesh in the flat plate laminar BL case — shunz / detail
  314. minor cleanup — shunz / detail
  315. Update for CentOS 7 — galbramc / detail
  316. minor cleanup/refactoring — shunz / detail
  317. Upgrade AFLR — galbramc / detail
  318. Fix unit test — galbramc / detail
  319. Add a stack parameter to CamberBlade — galbramc / detail
  320. Add option to constrain Mach number with BodyForces — galbramc / detail
  321. Fixes for specifying NormalMach as BodyForce constraint — galbramc / detail
  322. Rework Pprop output functional for BodyForces. Fix assertions for SAQCR. — galbramc / detail
  323. Unit test fixes — galbramc / detail
  324. Relax tolerance — galbramc / detail
  325. Fix bug in AFLR interface — galbramc / detail
  326. Relaxed basis function tolerances for intel — galbramc / detail
  327. Relax DG tolerances for intel — galbramc / detail
  328. Lots of warning fixes — galbramc / detail
  329. Tolerance fixes for intel compiler — galbramc / detail
  330. More warning fixes — galbramc / detail
  331. More warning fixes. Move adjoint MPI sync. — galbramc / detail
  332. Fix compile error — galbramc / detail
  333. Missed a warning — galbramc / detail
  334. Another warning fix — galbramc / detail
  335. More warning fixes — galbramc / detail
  336. Relax timeout — galbramc / detail
  337. Nightly fixes. Make TRIANGLE optional. — galbramc / detail
  338. cppcheck fixes — galbramc / detail
  339. Upgrade to ESP 1.19 (minimium required). Lots of cppcheck fixes. — galbramc / detail
  340. Warning fixes for CAPS — galbramc / detail
  341. Fixes to make triangle optional — galbramc / detail
  342. Dissable a test for now — galbramc / detail
  343. Missed a TRIANGLE suppression — galbramc / detail
  344. Relax test time — galbramc / detail
  345. One more use of TRIANGLE — galbramc / detail
  346. Relax one more test timing — galbramc / detail
  347. Update BoostBuild — galbramc / detail
  348. Add polynomial velocity profiles to Coles — galbramc / detail
  349. Some Coles profile fixes — galbramc / detail
  350. Refactor Rotor constraint — galbramc / detail
  351. Fixes for Rotor outputs — galbramc / detail
  352. Forgot a file — galbramc / detail
  353. Fix compile error — galbramc / detail
  354. Missed an output option — galbramc / detail
  355. More rotor output fixes — galbramc / detail
  356. Fix warning — galbramc / detail
  357. Allow no constraints during optimization — galbramc / detail
  358. Add back regular solve during body force optimization — galbramc / detail
  359. Relax timing — galbramc / detail
  360. Fix body force optimization for RANS — galbramc / detail
  361. More verbose error message — galbramc / detail
  362. One more body force optimization fix — galbramc / detail
  363. Update sansLIPAIM for ESP 1.19 — galbramc / detail
  364. Fix Rotort_GlobalConstraint convergence check — galbramc / detail
  365. Fix data transfer — galbramc / detail
  366. Add missing Python GIL protections — galbramc / detail
  367. Some nightly fixes. Better specification for building boost. — galbramc / detail
  368. Add Coloes polynomial pressure profile — galbramc / detail
  369. Add RANS Coles pressure profile. Relax test tolerances. Other small fixes. — galbramc / detail
  370. Remove upper bound check on Coles pressure polynomial — galbramc / detail
  371. Add ProfileDebug_eta_max — galbramc / detail
  372. Another tweak to Coles pressure profile — galbramc / detail
  373. Add polynomial pressure profile to back pressure BC — galbramc / detail
  374. Fix required delta for static back pressure — galbramc / detail
  375. VMSD-BR2 was using the wrong quadrature rule to calculate the non-zero pattern. Jacobian has been updated so that it should use correct (1 point) quadrature for non-zero pattern — blsc / detail
  376. Added logic to JacobianCell_VMSD_BR2 so that the static condensation matrices are not used for the non-zero patter calculation. Under-integration resulted in these matrices being singular. — blsc / detail
  377. Refactor BodyForceSolver — galbramc / detail
  378. Suppress Boost serialization bug for VectorS<M,SurrealS> — galbramc / detail
  379. Add missing include — galbramc / detail
  380. Test syncDOFs_MPI with more complex data types — galbramc / detail
  381. Add missing ifdef — galbramc / detail
  382. Put back distance function calculation — galbramc / detail
  383. Fix BodyForce solver initial condition — galbramc / detail
  384. Exlicitly use SANS::SurrealS with EGADS. Update NormalField test. — galbramc / detail
  385. Take away a toy — galbramc / detail
  386. Intel workaronud... — galbramc / detail
  387. Test the correct Face — galbramc / detail
  388. Fix compile error — galbramc / detail
  389. Warning fixes — galbramc / detail
  390. Finally found the NormalField bug. — galbramc / detail
  391. Fix OutGroup specification for BodyForce Solver — galbramc / detail
  392. Add Optimization option to BodyForce solver. — galbramc / detail
  393. Forgot to update checkInput function. — galbramc / detail
  394. Fix use of incorrect dictionary — galbramc / detail
  395. Fixes for boundary triangle orientation with refine — galbramc / detail
  396. Split trapped edges with refine. Check for all 0 element in distance function. Other small fixes. — galbramc / detail
  397. Forgot to update refineParam::checkInputs — galbramc / detail
  398. Updates to refine interface and print requested complexity with MOESS — galbramc / detail
  399. Use log_eucliean edge length with refine — galbramc / detail
  400. Try to fix suitesparse metis dilemma. Add more g++ and clang++ copmiler versions. — galbramc / detail
  401. gnu 11 fixes — galbramc / detail
  402. Remove -lc++ from clang flags — galbramc / detail
  403. Add missing include — galbramc / detail
  404. Upgrade ccache — galbramc / detail
  405. Fix SANSparallel MMA optimization — galbramc / detail
  406. Cleanup for last commit — galbramc / detail
  407. Removed execute permission for a .cpp file — shunz / detail
  408. Update ccache path — galbramc / detail
  409. Compile fixes for clang-10 — galbramc / detail
  410. Relax tolerance — galbramc / detail
  411. More compile fixes — galbramc / detail
  412. Warning fixes — galbramc / detail
  413. Lots of compile warnings and other fixes — galbramc / detail
  414. Use default functions in MatrixSymS. Increase execution times for coverage. Warning fixes. — galbramc / detail
  415. Fix typo — galbramc / detail
  416. Relax toleranes. Upgrade to AFLR 10.17.5. — galbramc / detail
  417. Use appropriate architecture for AFLR — galbramc / detail
  418. Update AFLR3 and use TRANSP_INT_BL for Body Force boundaries — galbramc / detail
  419. Fix warnings — galbramc / detail
  420. Update finding and checking AFLR — galbramc / detail
  421. Relax execution time — galbramc / detail
  422. Intel is just different... — galbramc / detail
  423. Relax more tolerances and fix indentations — galbramc / detail
  424. More intel relaxation — galbramc / detail
  425. Use system lcov and relax intel tolerance — galbramc / detail
  426. Use xHost instead of xhost so ccache works with Intel — galbramc / detail
  427. Add surface tecplot dump to BodyForce Solver — galbramc / detail
  428. Fix for body force surface outputs — galbramc / detail
  429. Added Pointwise mesh generator — galbramc / detail
  430. Parallel fix and forgot a file — galbramc / detail
  431. Fix Pointwise h calculation. Fix link errors. — galbramc / detail
  432. Small fix to Pointwise glf script — galbramc / detail
  433. Added waligura@mit.edu to DeveloperEmailAddresses — waligura / detail
  434. PDERANSSA2D changes which take out ntref as a variable in the PDERANS function and unit test. The unit test update is not ideal right now since I am still waiting on a way to calculate some terms, but there is a SANS developer exception for the time being. Needed to push it to start building off some new SA varaitions off of it. — waligura / detail
  435. Removing white spaces in PDERANSSA2D — waligura / detail
  436. Add isotropic MOESS optimization option for Pointwise — galbramc / detail
  437. Fixes to PDERANSSA2D and unit test — waligura / detail
  438. Another formatting change — waligura / detail
  439. Try again — waligura / detail
  440. messed up spacing at the end of the file — waligura / detail
  441. Valgrind python suppressions — galbramc / detail
  442. Nightly clang analyzer suppressions — galbramc / detail
  443. Correct volume calculation for Pointwise — galbramc / detail
  444. Pointwise fix for dimensionality — galbramc / detail
  445. changes to sandbox cases with nuref defined — waligura / detail
  446. Fix instantiation — galbramc / detail
  447. Clang compiler fix — galbramc / detail
  448. Relax timing for one test — galbramc / detail
  449. More changes to sandbox cases for nuref deletion update — waligura / detail
  450. Initilizing variables and raising the convergence tolerance — waligura / detail
  451. Just lowering the tolerance a little bit more on the PDERANS unit test to try and get it through Intel. I need to update this later anyway so this may be a temporary fix — waligura / detail
  452. Actually finding that closetol is defined multiple times in this unit test — waligura / detail
  453. Use Python 3.8.10 for valgrind and sanitizer — galbramc / detail
  454. Messing around with the tolerances a little bit more — waligura / detail
  455. Improved linesearch console output. Now when verbosity is on, the linesearch outputs whether a residual is increased (+), decreased (-), or converged (*) at the locations tested. — blsc / detail
  456. Updates to Newton. Neater verbose outputs to console for residual. Tracking nonlinear iterations taken correctly for cases where Newton does not converge. — blsc / detail
  457. Update PDEmitAVSensor2D and PDEmitAVSensor3D to better handle the afld, including system tests to ensure consistency. This required a few changes in the PDEEulermitAVDiffusion classes (more to changes to come with these). Also added a h/p scaling for the 2D sensor viscosity with unit test. — blsc / detail
  458. typo fixes in Pointwise tcl script — allmaras / detail
  459. Removed duplicated class definition in two cpp files, which may have led to unitialized data error reported by valgrind. — shunz / detail
  460. Fix nightly script — galbramc / detail
  461. Another nightly script fix — galbramc / detail
  462. Updates to Euler/NS mainly to improve the custom tecplot output. Updates to artificial diffusion classes to remove the a-field from params, since those should all be handled by the PDESensor classes now. Updates to the custom tecplot output function for RANSSA so we get the SA variable in the domain, and RANSSA fluxes at the boundary. Added PDEEulermitAVDiffusion3D.h to the exclusion list for file size. Updates to boundary conditions mostly to handle the a-field in the params in a cleaner way. — blsc / detail
  463. Renamed analytic functions with array output to hopefully avoid confusion — shunz / detail
  464. Updated PDESourceOnly and unit tests. Required some modification of a few PDEs in the process. — blsc / detail
  465. Updated homotopy continuation algorithm. This involves an update to the constructor, so the relevent sandbox cases have been updated. A few sandbox cases and unit test have been disabled. The unit test will be re-enabled once it has been updated to the new interface (the content is currently lacking anyway). Also added a function to SolverInterface_VMSD_BR2 to return the total (q + qp) fine (p+1 without subtraction) adjoint for output to Tecplot. — blsc / detail
  466. Minor edits — shunz / detail
  467. Add ProjectToQauxi equation class for coupling FP+IBL3 — shunz / detail
  468. Rename VectorFunction3D to ArrayFunction based on new naming convention — shunz / detail
  469. Removed all the cases that were disabled in the sandbox. Re-added the homotopy unit tests (still need more work, but to check basic functionality). Updated advection-diffusion and PDEHomotopy interfaces to support the new unit test. — blsc / detail
  470. Add initial framework for Auxi equation for FP-IBL3 coupling — shunz / detail
  471. Minor cleanup — shunz / detail
  472. Removing some secluded ntref values pointed out by Ben — waligura / detail
  473. add anonymous namespace for safety — shunz / detail
  474. Included all the necessary fields int Auxi equation for FP-IBL3 — shunz / detail
  475. Renamed integrand for projection to Qauxi — shunz / detail
  476. Added the ability to specify parameters for positivity preserving source in Euler. Updated tests to reflect change in constructor. — blsc / detail
  477. I think this will fix the error Jenkins bought up for the Euler with rotor PDE. — blsc / detail
  478. Fix Euler with rotor PDE boundary condition — blsc / detail
  479. Fix Euler with rotor PDE boundary condition -- Surreals could be passed through the PointSequence too. — blsc / detail
  480. Removed unused header from Homotopy.h — blsc / detail
  481. Warning fixes — blsc / detail
  482. More warning fixes for missing override keyword. — blsc / detail
  483. Update to latest avro — galbramc / detail
  484. avro parallel fixes — galbramc / detail
  485. Dissable avro graphics — galbramc / detail
  486. add const qualifier just to be extra cautious — shunz / detail
  487. Initial working prototype of projection to Qauxi without the div.(M) term — shunz / detail
  488. Distinguish volume and manifold quadrature order configurations — shunz / detail
  489. Rename integrand class for clarity — shunz / detail
  490. 4D fixes, and rename Ptope to Pentatope — galbramc / detail
  491. Missed a file — galbramc / detail
  492. Remove file dump — galbramc / detail
  493. Fix warning — galbramc / detail
  494. Add initial API of manifold integrands for Auxi equation — shunz / detail
  495. Put avro WriteConformity back, but does nothing for now — galbramc / detail
  496. add more details to integrand of manifold boundary trace for FP-IBL3 coupling — shunz / detail
  497. More avro parameter fixes — galbramc / detail
  498. Reduce Pentatope mesh size. Fix accidental commit — galbramc / detail
  499. Warning fix — galbramc / detail
  500. rename files/classes for clarity — shunz / detail
  501. add missing include — shunz / detail
  502. [intermediate progress] compiling prototype of manifold boundary trace integrals in auxi equation for FP-IBL3 coupling — shunz / detail
  503. minor edit — shunz / detail
  504. Removed unnecessary destructor — shunz / detail
  505. typo fix — shunz / detail
  506. Access cell group via global indexing instead of local — shunz / detail
  507. Initial working prototype of new Field for Qauxi for FP-IBL3 so that DOFs can be viewed as volume boundary trace and area cell at the same time — shunz / detail
  508. Type-related bugfix in FP PDE — shunz / detail
  509. cleaned up unused method — shunz / detail
  510. Updated VMSDBR2 statically condensed Jacobian calculating to accept multiple RHS to condense using a single Jacobian calculation. Updated linear solvers for globally constrained systems to use this new functionality. Added unit tests to test that results from multiple-RHS code matches applying the single-RHS code to each RHS individually. This update will only affect globally constrained systems (using VMSDBR2). — blsc / detail
  511. Hard coded manifold/surface quad grid that matches z-min boundary group of a box hex grid — shunz / detail
  512. Added comments to BC data field implementation — shunz / detail
  513. Minor typo fix — shunz / detail
  514. Refactored DOF indexing contruction to ensure consistency between volumeb boundary trace field and area cell field — shunz / detail
  515. Rename variable for clarity.  Add exception to guard against misuse of BC data in full potential wall transpiration BC — shunz / detail
  516. Start a new case of FP-IBL3 coupling by copying from existing FP-only case. — shunz / detail
  517. Fixed clang warnings. Fixed abstract class error due to not implementing static condensation update to MKL. Have added a developer exception so the execution path exists, but extension still not implemented for MKL. — blsc / detail
  518. Refactored AES Project to Qauxi for flat plate 3D panel so that it's ready to be generalized for 3D FP coupling as well — shunz / detail
  519. Removed a deprecated header file — shunz / detail
  520. Add partial specialization to support block 4x4 FP+IBL3 coupling — shunz / detail
  521. Fixed missing BC parameter checks — shunz / detail
  522. Fixed long line formatting — shunz / detail
  523. Fixed more intel warnings. Added unit tests for the multi-RHS logic for UMFPack and MKL. The MKL test ensures that a developer excpetion occurs, since the logic for MKL has not been implemented. Moved the sum-constrained algebraic equation set in to its own file (like the Advection and Heat equation sets). — blsc / detail
  524. minor cleanup — shunz / detail
  525. Add static data member to identify the size of jacobian (i.e. number of equations and variables) — shunz / detail
  526. Add unit test for block 4x4 system of FP-IBL3 coupling. Still a working progress, but test compiles and runs — shunz / detail
  527. Fixed more intel warnings. Added unit tests for the multi-RHS logic for FMGRES. The FGMRES test ensures that a developer excpetion occurs, since the logic for MKL has not been implemented. — blsc / detail
  528. Completed Auxi equation for FP-IBL3 coupling — shunz / detail
  529. Fix a bug in block 3x3 and 4x4 system of equations: MatrixSize().  It has been identified because perviously block (2,1) is decoupled/zero for previous test cases — shunz / detail
  530. Refactor jacobian ping test screen output for clarity — shunz / detail
  531. Refactor JacobianParam to allow for multiple parameters of different dimension, e.g. for Auxi equation of FP-IBL3 coupling — shunz / detail
  532. Pass block 4x4 block algebraic equation set unit test without coupling for FP and Auxv equations — shunz / detail
  533. add const qualifiers — shunz / detail
  534. Add annotation to AES_Auxi — shunz / detail
  535. Remove redundant class template arguments — shunz / detail
  536. Remove AGLS. Add blockage and viscous terms to RotorSource. — galbramc / detail
  537. Missed a file — galbramc / detail
  538. Refator AES_auxv mass matrix jacobian computation for clarity and simplicity — shunz / detail
  539. BC fixes — galbramc / detail
  540. Fix include — galbramc / detail
  541. More boundary condition cleanup — galbramc / detail
  542. Relax tolerance — galbramc / detail
  543. Warning fix — galbramc / detail
  544. Auxi parameter jacobian is now compiling. — shunz / detail
  545. Rename class and file — shunz / detail
  546. Added functionality to project from a DG to a CG field defined on the same x-field. — blsc / detail
  547. Remove infinite x-dervative for thickenss. Fix warnings. — galbramc / detail
  548. DG ot CG prjection now uses explicit instantiation. — blsc / detail
  549. Simplify jacobian calculation of Auxi equation as it's simply mass matrix for Galerkin projection — shunz / detail
  550. Add a specialized IntegrateCellGroups method for reuse in FP-IBL3 coupling implementation — shunz / detail
  551. More strict templates for AV. Add strongFluxViscous to AV. — galbramc / detail
  552. modified (solution error)^2 to use dot product; now allows general ArrayQ<T> solution — allmaras / detail
  553. Warning fixes — galbramc / detail
  554. Fix for older cmake versions — galbramc / detail
  555. Replace max with smoothRamp_tanh2 for artificial viscosity — galbramc / detail
  556. Some more tests — galbramc / detail
  557. Fix smoothRamp_tanh2. Fix ThicknessNACA6 to use fabs instead of abs. — galbramc / detail
  558. Suppress compiler warning — galbramc / detail
  559. Fix warning and relax tolerance — galbramc / detail
  560. Enable viscous body forces for Euler — galbramc / detail
  561. Completed Auxv_Qinv jacobian — shunz / detail
  562. Added a test to check that bubble modes were not present in VMSD after static condenstaion for a partial Newton step. — blsc / detail
  563. Vera exclusion needed for new unit test (L006). — blsc / detail
  564. Added parallel test for homotopy, found bug in parallel, fixed bug in parallel. — blsc / detail
  565. Discrete blockage gradient — galbramc / detail
  566. Forgot a file — galbramc / detail
  567. Added an example homotopy adapt in 3D with RANS, and some missing function calls. — blsc / detail
  568. Vera fix — galbramc / detail
  569. Fix compile error — galbramc / detail
  570. Added HiFW Joukowski case using homotopy (still WIP). Updates to artificial viscosity interface to resolve some template mis-matches during Joukowski case set up. — blsc / detail
  571. Add annotations — shunz / detail
  572. Another compile fix — galbramc / detail
  573. Another compile fix — galbramc / detail
  574. Fixed error in PETSc Dicts. — blsc / detail
  575. Relax tolerance. Add PETScInit. Suppress warning. — galbramc / detail
  576. More warning fixes — galbramc / detail
  577. PDERANS3D fixes — galbramc / detail
  578. Fixes for AVSensor_Source_VMSD_SPD — galbramc / detail
  579. Fix ping test — galbramc / detail
  580. Change git update alias — galbramc / detail
  581. Fix sensitvity calculation — galbramc / detail
  582. Don't require name for camber free parameters — galbramc / detail
  583. Implement BCNone for VMSD BR2. I hope nobody has been using it... — galbramc / detail
  584. Completed d(FP)/d(Qauxi) coupling jacobian for FP-IBL — shunz / detail
  585. Forgot to commit unit test on d(FP)/d(Qauxi) jacobian — shunz / detail
  586. Removed redundant files for discarded Auxi and Auxv equation implementation — shunz / detail
  587. Removed more discarded implementation for Auxi (in FP-IBL3) — shunz / detail
  588. Add linear algebra instantiations for FP-IBL3 — shunz / detail
  589. Refactoring to keep up with JacobianParam's updated template arguments — shunz / detail
  590. Fixed formatting — shunz / detail
  591. Minor refactoring — shunz / detail
  592. Add unit test for box grid and its derived boundary manifold grid — shunz / detail
  593. Minor cleanup — shunz / detail
  594. Add more unit test — shunz / detail
  595. Add unit test for FieldVolume_DG_BoundaryTrace_matchAreaCell — shunz / detail
  596. Bug fix: previously, allocated memory for dynamic matrix but didn't initialize to zero — shunz / detail
  597. Completed 4x4 block system jacobian ping test for FP-IBL3 coupling — shunz / detail
  598. Added Tt output for Rotor — galbramc / detail
  599. added instantiations for Newton solution of FP-IBL3 equations — shunz / detail
  600. Solved first FP-IBL3 case with Newton solver — shunz / detail
  601. added instantiations for MKL and PETSc for FP-IBL3 — shunz / detail
  602. added implementation for PETSc for FP-IBL3 — shunz / detail
  603. modularized S-shaped duct grid points generation — shunz / detail
  604. debugging (for sporadically slow FP residual/jacobian) and refactoring FP-IBL3 test case — shunz / detail
  605. mod: VectorFunction -> ArrayFunction — allmaras / detail
  606. inviscid Joukowski with interface to Pointwise — allmaras / detail
  607. Added more profiling info for debugging FP-IBL3 — shunz / detail
  608. added verbose printout for debugging — shunz / detail
  609. fixed formatting errors — shunz / detail
  610. Fix Tt rotor output — galbramc / detail
  611. fixed lines that were too long — allmaras / detail
  612. fixed promote_Surreal bug (only showed up for USE_GRID_LAPLACIAN) — allmaras / detail
  613. Vector -> Array fix to be consistent with new Array*Function nomenclature — allmaras / detail
  614. added Array2Function2D class (2-component, each an analytic function) with unit test; — allmaras / detail
  615. added PyDict options for xz and yz angle offsets for 3D corner singularity — allmaras / detail
  616. Fixes for running Joukowski with avro and refine — galbramc / detail
  617. Fixes for triangle — galbramc / detail
  618. Fix for triangle with holes — galbramc / detail
  619. some cleanup on full potential PDE — shunz / detail
  620. refactored and added to residualDecreaseStatus(.) — shunz / detail
  621. fixed over-array-bound access — shunz / detail
  622. switched assertions from runtime to compile time — shunz / detail
  623. refactored FP-IBL3 S-duct test case — shunz / detail
  624. forgot to commit this... refactored linear solution checker — shunz / detail
  625. removed redundant partial specialization in AES_PTC — shunz / detail
  626. annotated PTC implementation of paramfld_ and paramfldpast_ — shunz / detail
  627. beautified Newton iteration printout — shunz / detail
  628. refactored an MatrixS constructor — shunz / detail
  629. added comments — shunz / detail
  630. enabled PTC for FP-IBL3 4x4 coupling — shunz / detail
  631. fixed FP and IBL side wall BC — shunz / detail
  632. refactored std::vector access to use bound checking — shunz / detail
  633. added comments on how/why CFL changes in PTC iterations — shunz / detail
  634. refactored PTC printout & dump — shunz / detail
  635. minor tweak to test case — shunz / detail
  636. Refactored S-duct box grid — shunz / detail
  637. Cleaned up 3D FP BC — shunz / detail
  638. some cleanup — shunz / detail
  639. added commented out code for timing — shunz / detail
  640. fixed warnings — shunz / detail
  641. added sanity check.  some cleanup — shunz / detail
  642. changed IBL3 surface normal orientation convention to be compatible with FP-IBL3 coupling — shunz / detail
  643. Refactored projection onto Qauxv to be only in-surface velocity components in FP-IBL3 coupling — shunz / detail
  644. added assertion to guard against misuse — shunz / detail
  645. Consolidated auxi equation implementation for 3D full potential and panel — shunz / detail
  646. minor cleanup — shunz / detail
  647. Merged ProjectToQauxi3D implementation for panel and FP coupling with IBL3 — shunz / detail
  648. more cleanup on include — shunz / detail
  649. Cleaned up and merged interior trace integrand for IBL3 and Auxi.  Renamed files — shunz / detail
  650. added missing include that was accidentally removed — shunz / detail
  651. cleaned up include related to 2D/3D manifold cell integrands — shunz / detail
  652. more cleanup of include — shunz / detail
  653. Cleaned up panel+IBL3 case — shunz / detail
  654. added option in IBL3 to choose how nrm_surf orientation relates to e1 and e2 — shunz / detail
  655. minor test case cleanup/tweaks — shunz / detail
  656. turned off (1) LF flux, (2) mass correction to flux and (3) amp+lag equations for IBL3 — shunz / detail
  657. fixed style — shunz / detail
  658. refactored param tuple type for better consistency between indexing, ParamTuple and FieldTuple — shunz / detail
  659. renamed parameter field type — shunz / detail
  660. refactored parameter type for IBL3 — shunz / detail
  661. refactored JacobianParam class since the previous implementation is quite limiting — shunz / detail
  662. updated JacobianParam usage in test cases following its refactoring — shunz / detail
  663. more cleanup on JacobianParam usage — shunz / detail
  664. updated use cases involving Auxi equation in panel+IBL3. deleted sandbox cases that are not worth maintaining — shunz / detail
  665. updated use cases of new PDEIBL3FourEqn API — shunz / detail
  666. fixed full potential unit tests — shunz / detail
  667. fixed a bug/typo: flipped divM and divM_rhoe flux calculation for Auxi. Fortunately, the effect on current test cases is minimal since they are incompressible flows — shunz / detail
  668. fixed IBL unit tests — shunz / detail
  669. minor cleanup of 3D IBL PDE and associated block jacobian ping test — shunz / detail
  670. Removed the dedicated (yet redundant) boundary trace integrand for 3D auxi; instead, use 3D manifold BCNone integrand.  Renamed 2D/3D BCNone integrands to reflect its general purpose, not limited to IBL PDE — shunz / detail
  671. refactored/fixed Surreal type definitions to use proper/general size variable — shunz / detail
  672. accidentally forgot these pieces two commits earlier, when updating auxi BCNone integrand — shunz / detail
  673. fixed some compile errors for auxi equation and boundary integrand — shunz / detail
  674. minor integrand cleanup — shunz / detail
  675. refactored auxi equation's cell integrand to be PhysDim-agnostic, in prep for generalization of auxi aes class — shunz / detail
  676. Renamed auxi aes class to be not 3D specific, in prep for generalization — shunz / detail
  677. Refactored BCNone integrand for Galerkin manifold to be agnostic of PhysDim — shunz / detail
  678. fixed/refactored a few Galerkin_manifold boundary integands to be agnostic of PhysDim — shunz / detail
  679. Use isotropic implied metric for IsotropicOpt MOESS — galbramc / detail
  680. refactored Galerkin_manifold interior trace integrands to be agnostic of PhysDim — shunz / detail
  681. removed daisy chain in JacobianParam since it could be handled by the primary algebraic equation class's jacobianParam(...) — shunz / detail
  682. removed 3D-specific assertion — shunz / detail
  683. refactored usage of jacobianParam(...) to account for any daisy chain in the primary algebraic equation set — shunz / detail
  684. Refactored daisy-chain/linked list implementation of algebraic equation sets, including auxi equation and proper chained calls to jacobianParam() — shunz / detail
  685. removed redundant daisy-chained calls to setSolutionField() and fillSystemVector() in algebraic equation sets.  Clarified the intended use case of daisy-chained equation set — shunz / detail
  686. Refactored 2D auxi PDE class to prepare panel-IBL2 to use the PhysDim-agnostic auxi equation implementation.  Removed redundant auxi equation set and integrand classes that used to be specialized for Panel2D — shunz / detail
  687. Removed 3D-specific assertion in auxi cell integrand. Fixed IBL2 captured transition system test case — shunz / detail
  688. Cleaned up auxi equation implementation to remove redundant dummy members in FunctionEval class.  Renamed some files & classes — shunz / detail
  689. cannot assign a regular/raw pointer to std::shared_ptr — shunz / detail
  690. Cleaned up 2D auxv equation implementation for XfoilPanel+IBL to remove redundant dummy members in FunctionEval class.  Renamed some files & classes — shunz / detail
  691. cannot assign regular/raw pointer to std::shared_ptr — shunz / detail
  692. Cleaned up 3D auxv equation implementation for flat plate panel+IBL3 to remove redundant dummy members in FunctionEval class — shunz / detail
  693. minor refactoring of XfoilPanel field discretization order checks/assertions — shunz / detail
  694. refactoring (similar to previous ones) to have PDEIBL2D define its parameter field tuple types — shunz / detail
  695. typo fix — shunz / detail
  696. only prints in verbose mode — shunz / detail
  697. fixed system/CodeConsistency tests for IBL — shunz / detail
  698. cleanup and fixes to keep IBL-related implementation up to date — shunz / detail
  699. more cleanup on DG/HDG discretization unit tests, mostly related to IBL — shunz / detail
  700. cleanup & fixes to panel-IBL3 3x3 block discretization unit tests to keep up to date with IBL-related implementation — shunz / detail
  701. removed redundant include — shunz / detail
  702. fixed miscellaneous XfoilPanel+IBL2 aes unit tests to stay up to date with latest IBL implementation — shunz / detail
  703. cleaned up & fixed sandbox cases for XfoilPanel+IBL2D single run and drag polar for airfoil — shunz / detail
  704. miscellanenous fixes of compile error and formatting style — shunz / detail
  705. removed uses of gradqn and q in Neumann and Dirichlet BCs respectively for potential flow — shunz / detail
  706. fixed some compile errors and formatting style — shunz / detail
  707. updated pyrite check files for IBLFourEqn3D to use LF flux without mass correction — shunz / detail
  708. fixed miscellaneous unit tests related to coupled IBL — shunz / detail
  709. fixed FP-IBL3 jacobian ping test — shunz / detail
  710. fixed a few compile errors and warnings related to a few sandbox test cases not up-to-date with latest FullPotential PDE/BC implementation — shunz / detail
  711. renamed class & files. re-org include.  started a LIP+IBL3 sandbox case by copying over FP-IBL3 — shunz / detail
  712. allows FP-IBL3 jacobian ping test to run longer on Jenkins — shunz / detail
  713. fixed unit test of auxv aes for 3D full potential — shunz / detail
  714. Reverted some changes in the use of LIP BCs.  These changes should NOT have been made — shunz / detail
  715. relocated a unit test to IBL folder — shunz / detail
  716. passed a few ping tests related to coupled IBL3 — shunz / detail
  717. fixed two unit tests troubled by misuse of MPI communicator — shunz / detail
  718. refactored some explicit instantiations for better generality and less tedious code — shunz / detail
  719. use MatrixS_or_T instead of MatrixS to account for the case of MatrixQ=Real — shunz / detail
  720. relaxed time limit for a block jacobian ping test on Jenkins.  trying to fix an undefined reference error by altering the order of loading lib in CMakeLists — shunz / detail
  721. rename/reorg files/classes to remove FullPotential 3D specificity from Auxv equation implementation — shunz / detail
  722. Relocated Matrix PDE_Qauxi typedef into PDE class in lieu of integrand class — shunz / detail
  723. Looks like Jenkins censored the previous commit msg cuz it contains the word 'e-r-r-o-r'. Amend the commit msg now. relaxed time limit for a block jacobian ping test on Jenkins.  trying to fix an undefined reference e-r-r-o-r by altering the order of loading lib in CMakeLists — shunz / detail
  724. make a method protected as it is not a necessary API for mitLG BC — shunz / detail
  725. Add comments.  Make basis functions class members to reduce re-allocating memory during operator calls — shunz / detail
  726. Refactored LIP PDE to prep it to be run with coupled IBL3.  Added Dirichlet_mitLG BC for LIP — shunz / detail
  727. relaxed machine precision level tolerance in a unit test for intel compiler to pass — shunz / detail
  728. Replaced tedious & repetitive block matrix instantiation statements with macro definitions. Added explicit instantiations for MatrixBlock_4x4 for LIP-IBL3 coupling — shunz / detail
  729. Replaced tedious & repetitive block matrix instantiation statements with macro definitions. Added explicit instantiations for MatrixBlock_4x4 for LIP-IBL3 coupling — shunz / detail
  730. fixed some lingering merge conflicts — shunz / detail
  731. fix no-return warnings in a function with non-void return type — shunz / detail
  732. refactored miscellaneous unit tests. added missing explicit instantiation for 4x4 block matrix — shunz / detail
  733. added option of Dirichlet_mitLG for LIP test --> result matches LinearScalar_sansLG, so not need bother with mitLG — shunz / detail
  734. fix missing return statement issue — shunz / detail
  735. minor cleanup — shunz / detail
  736. add state validity check assertions for Auxv projection integrand class — shunz / detail
  737. refactored LIP BC and PDE to enable coupled LIP-IBL3 test case to run — shunz / detail
  738. simply renamed some variables for brevity — shunz / detail
  739. speed up LIP-IBL3 run by initializing with Falkner-Skan solution and solving IBL3 in uncoupled mode — shunz / detail
  740. make IBL3 LF vs Full upwind flux choice a runtime decision — shunz / detail
  741. fix typos that caused compile errors — shunz / detail
  742. add unit tests to 4-equation 3D IBL PDE — shunz / detail
  743. add explicit instantiation — shunz / detail
  744. set minimum IBL output field order to be 1 — shunz / detail
  745. add/refactor explicit instantiations — shunz / detail
  746. fixed issues with uninitialized data in boundary integand, which became a problem due to recent refactoring to 3D LIP BC (i.e. swtich from assignment to cumulation in data(...)).  Some other fixes to compile warnings — shunz / detail
  747. Implementing N wave problem for Burgers using Advection Diffusion — cwomack / detail
  748. Removed one variable. — cwomack / detail
  749. Tried a few more duct geometries for IBL3 — shunz / detail
  750. fix for messed up merge conflict — allmaras / detail
  751. fix typo in comments — shunz / detail
  752. fix for messed up merge conflict — allmaras / detail
  753. Added Darmofal changes to Nwave code. — cwomack / detail
  754. added checks on SANS_AVRO and SANS_REFINE — allmaras / detail
  755. More changes — cwomack / detail
  756. Changed OutputNDConvert to match Dave's — cwomack / detail
  757. add a manifold (area) grid based on four sides of a box that form a ring — shunz / detail
  758. Added deanna.sewell@colorado.edu to DeveloperEmailAddresses — deanna.sewell / detail
  759. add to unit tests of BoxBoundaries grid (duct ring) — shunz / detail
  760. reverted OutputCell_SolutionErrorSquared to its former functionality (input is Real/VectorS, — allmaras / detail
  761. Added mitStateSpaceTime BC for 1D Advection Diffusion — cwomack / detail
  762. sans-Lagrange adiabatic & isothermal no-slip BCs for NS — allmaras / detail
  763. relaxed tolerance on unit test — allmaras / detail
  764. modified speedCharacteristic for AD with zero advective flux — allmaras / detail
  765. refactoring of BoxBoundary grid: group indexing and area_cell to volume_boundary mapping — shunz / detail
  766. add a test case of LIP-IBL3 for IBL3 on a duct ring (i.e. 4 side walls of a box) — shunz / detail
  767. added sans-Lagrange no-slip BC types to 2D NS — allmaras / detail
  768. MatrixS_MatMul instantiations needed for sans-Lagrange no-slip BCs for NS — allmaras / detail
  769. Explicitly only use one OpenMP thread for PETSc with MPI — galbramc / detail
  770. mat-mul needed for sans-Lagrange no-slip BCs for NS — allmaras / detail
  771. minor refactoring — shunz / detail
  772. added IO files for sans-Lagrange no-slip BCs for NS — allmaras / detail
  773. playing with laminar and turbulent cases for LIP+IBL3 — shunz / detail
  774. minor cleanup — shunz / detail
  775. Turned off full jacobian ping test for 3-eq IBL Quad.  Also some minor clean. — shunz / detail
  776. Correction to last commit message: should be "Turned ON full test" — shunz / detail
  777. changes to HDG FieldWeighted integral for sans-Lagrange no-slip BCs for NS; note — allmaras / detail
  778. Added deltaRef for body force viscous terms — galbramc / detail
  779. some cleanup on panel-IBL3 sandbox case — shunz / detail
  780. Add missing includes — galbramc / detail
  781. Forgot a file — galbramc / detail
  782. Separate constant and quadratic body force viscous terms — galbramc / detail
  783. fixed compile error and warning — shunz / detail
  784. Turned on full jacobian ping test for coupled panel+IBL3 (3-eq) — shunz / detail
  785. Turned on more jacobian ping test — shunz / detail
  786. Fix link error — galbramc / detail
  787. Fix Newton iteration separator — galbramc / detail
  788. Update unit test — galbramc / detail
  789. refactored panel-IBL3 case running setup — shunz / detail
  790. Output IBL results of mass defect flux in lieu of dummy output of qz_X — shunz / detail
  791. bug fix: consistent definition of w and b fields in FieldWeighted — allmaras / detail
  792. Refactored sandbox case setup: panel-IBL3, LIP-IBL3 — shunz / detail
  793. Forgot to suppress one output — galbramc / detail
  794. Return results from Constrained body force solver — galbramc / detail
  795. fix style — shunz / detail
  796. refactor and unit test Auxv equation for 3D flate plate panel — shunz / detail
  797. minor cleanup — shunz / detail
  798. Refactor Auxv equation of 3D flat plate panel method to allow for CG p1 qauxvfld for better DOF efficiency — shunz / detail
  799. Fix bug in deltaRef reduction process — galbramc / detail
  800. fix warning messages — allmaras / detail
  801. minor cleanup — shunz / detail
  802. bug fix: 3D panel method with triangle panels was computing panel area wrongly by double-multiplying reference area.  Added unit tests for this panel method — shunz / detail
  803. fix compile errors caused by typos and lag behind previous  refactoring — shunz / detail
  804. fix style for Vera check — shunz / detail
  805. minor cleanup of sandbox case — shunz / detail
  806. more warning messages — allmaras / detail
  807. fix warnings: comparing int and size_t in for loop — shunz / detail
  808. relaxed tolerance for intel — shunz / detail
  809. fix duplicated BOOST test suite names — shunz / detail
  810. Allow for no-wall distance functions — galbramc / detail
  811. Support 3D Q2 meshes with libMeshb — galbramc / detail
  812. changed full upwind back to using momentum flux correction by default — shunz / detail
  813. Fix warning — galbramc / detail
  814. More changes to get Nwave boom propagation working — cwomack / detail
  815. Redid unit test for nwave — cwomack / detail
  816. Use KSPGMRESModifiedGramSchmidtOrthogonalization which is slower but more stable — galbramc / detail
  817. Format fix — galbramc / detail
  818. Relax tolerance — galbramc / detail
  819. fixed undefined symbol/linking errors.  static const member needs to be define in cpp, strictly speaking.  clang compiler was rigorous enough to catch this, although gnu lets it pass... — shunz / detail
  820. fixed compile warnings about comparing int and unsigned int — shunz / detail
  821. First attempt at extracting Profile Loss for body forces — galbramc / detail
  822. add unit tests for better coverage — shunz / detail
  823. Forgot to update checkInputs — galbramc / detail
  824. More profile loss fixes — galbramc / detail
  825. Use Yuankang Chen data fit value for body force delta**2 term — galbramc / detail
  826. Fixes for profile loss — galbramc / detail
  827. Cppcheck suppressions and Profile loss computed at constant radius — galbramc / detail
  828. One more try at profile loss — galbramc / detail
  829. just renaming — shunz / detail
  830. Start removing perturbed stuff — galbramc / detail
  831. cppcheck fix and suppression — galbramc / detail
  832. clang analyzer fixes — galbramc / detail
  833. Fix cppcheck suppression — galbramc / detail
  834. add derivative calculation for IBL3 laminar eigen-analysis — shunz / detail
  835. More cppcheck fixes — galbramc / detail
  836. More body force output functionals — galbramc / detail
  837. switched to constant density gas model for IBL — shunz / detail
  838. Remove lienar VMSD and perturbed functions — galbramc / detail
  839. Relax tolerance — galbramc / detail
  840. added sansBOOM PDE directories; added standard atmosphere — allmaras / detail
  841. Remove _NL VMSD suffix — galbramc / detail
  842. Relax timing — galbramc / detail
  843. fixed vera squawk — allmaras / detail
  844. refactoring to to keep up with the constant-density gas model in IBL3 — shunz / detail
  845. Enable output functionals on BodyForce LE/TE surfaces — galbramc / detail
  846. Fix body force relative output functionals — galbramc / detail
  847. Relax tolerance — galbramc / detail
  848. Realxer tolerance — galbramc / detail
  849. more refactoring to to keep up with the constant-density gas model in IBL3 — shunz / detail
  850. Turbulence model constructor and unit test formatting changes. Functional SA-Catris models and framework for SA-LRe and SA-R models as well. — waligura / detail
  851. minor compile error/warning fix — shunz / detail
  852. Pulling in updates for the asymptotically consistent error estimate in VMSD. PDEs have gained an additional typedef, the type of the consistent part of the PDE. This is just the PDEs type for almost all PDEs. New PDE types have been added for using the asymptotic consistency correction for Euler/NS/RANSSA with sensor based artificial diffusion (the originals have been retained for the time being). Updates to the problem interface and the error estimation classes for VMSDBR2 have also been made. Using the asymptotically consistent correction requires some additional data, but the interface for problems not needing that functionality are unchanged. — blsc / detail
  853. updated pyrite files — shunz / detail
  854. Cleaned up AVSensor_Source2D.h a little bit to remove some unused code. — blsc / detail
  855. Missed vera warning — blsc / detail
  856. Forgot to turn off verbose and file output — shunz / detail
  857. Missed another vera warning — blsc / detail
  858. relaxed tolerance — shunz / detail
  859. Fix so 2D avro works for wirebody — galbramc / detail
  860. Added a N-S case of laminar BL — shunz / detail
  861. Fixed the remaining clang and gnu11 compiler warnings. — blsc / detail
  862. cleaned up NS laminar BL sandbox case — shunz / detail
  863. Separated findElement() function into a dedicated file — shunz / detail
  864. Refactored findTraceElement to use simple bounding box check without resorting to the kd-tree hammer...  Added unit test — shunz / detail
  865. Refactor Homotopy so it can be used with any PDE — galbramc / detail
  866. Fix warnings — galbramc / detail
  867. Expose Viscous body force coefficients as user inputs — galbramc / detail
  868. Nightly fixes — galbramc / detail
  869. Added BL profile extraction capability to a NS sandbox case — shunz / detail
  870. Refactored 3D Tet flat plate grid.  Added mutable access to AES in solver interface (but only able to use it by commenting out exception).  More refactoring to NS laminar BL sandbox case — shunz / detail
  871. minor cleanup of sandbox case — shunz / detail
  872. fixed warnings: size_t vs int — shunz / detail
  873. turned off projection between different grids when doing solution sequencing because it does not work due to (probably) a bug... — shunz / detail
  874. Fix mistake in body force — galbramc / detail
  875. Change some QCR variable types in PDERANS and other formatting changes for successful make check. Updated PDERANS and b_test to be consistent with current changes on develop — waligura / detail
  876. fixed warnings: size_t vs int — shunz / detail
  877. bug fix in user input — shunz / detail
  878. fixed style. minor tweak in PETSc setup in a test case — shunz / detail
  879. Refactored grid and test case for NS LamiBL — shunz / detail
  880. Changes to diffusionViscous and diffusionViscousGradient unit tests to check Catris variations. Still working on the formatting but will push this version for now — waligura / detail
  881. Pushing again with vera changes. Something seems to be up with my vera check — waligura / detail
  882. Another vera message I did not see before sending — waligura / detail
  883. Relaxed convergence tolerance in a test case — shunz / detail
  884. Further formatting changes to PDERANS and another vera error I missed initially — waligura / detail
  885. Further formatting changes fixing most of the alignment issues and getting rid of the -= — waligura / detail
  886. Refactored BL sampling function in NS LamiBL test case — shunz / detail
  887. Add ddelta dump for RotorSource — galbramc / detail
  888. Fix warning — galbramc / detail
  889. Working Changes: Finalized AD Burgers test case for boom propagation — cwomack / detail
  890. Small cleanup — galbramc / detail
  891. Remove output_grm — galbramc / detail
  892. Wording changes to SATurbModel and shortening of nonc variables — waligura / detail
  893. Fixed long line.  Separated functions into a cpp file — shunz / detail
  894. Fixed compile and linker errors in findTraceElement(...) — shunz / detail
  895. Added support for S-shaped duct geomerty in flat plate grid in 3D — shunz / detail
  896. adding in the first go at untest SA_R and SA_LRe modifications for 2D. Also making sure all pushes are going through before moving on. — waligura / detail
  897. fixed file I/O mode — shunz / detail
  898. added check for file I/O — shunz / detail
  899. Added a sin duct geometry for IBL3 sandbox case — shunz / detail
  900. Initial commit of sansBOOM PDE implementation with the advective and viscous terms defined — darmofal / detail
  901. refactored Flux_mitState BC implementation for IBL3 to use fluxNormal() instead of evaluating it in the integrand class — shunz / detail
  902. Minor fixes for artificial viscosity — galbramc / detail
  903. Turned on mitLG Dirichlet BC for LIP-IBL3 case at inlet.  Fixed buggy isValidState check that checks uninialized boundary state qB — shunz / detail
  904. Initial implementation of sansBOOM BCs and Adapt2D_DGBR2_sansBOOM_toy — darmofal / detail
  905. Forgot to commit a few lines — shunz / detail
  906. Some more edits to sansBOOM PDE/BC implementation — darmofal / detail
  907. Changed default xtr parameter in IBL transition model from max Real (causing floating point overflow error) to 1e5 — shunz / detail
  908. Fixed (1) division by zero in cut-cell natural transition and (2) unit test for default xtr value — shunz / detail
  909. Still not compiling.  Pushing to allow Marshall to look at N=1 issue — darmofal / detail
  910. Initializing a variable in jacobianFluxViscous correctly — waligura / detail
  911. Allow PDE to use ArrayQ = VectorS<1,T> — galbramc / detail
  912. Homotopy dict fixes — galbramc / detail
  913. Final changes to LocalLaxFriedrichs1D flux function and AD Burgers toy — cwomack / detail
  914. Remove GLPK — galbramc / detail
  915. Missed one — galbramc / detail
  916. Pushing current version of sansBOOM to repo — darmofal / detail
  917. Enable 3D sourcePositivity for NS and RANSSA — galbramc / detail
  918. Most recent mods to sansBOOM implementation — darmofal / detail
  919. Removed changes to Lagrange Triangle — cwomack / detail
  920. Fix compile error — galbramc / detail
  921. Fixed Robin boundary condition for Euler/NS/RANSSA with sensor equation. Updated unit tests to reflect fix. — blsc / detail
  922. Compile fixes — galbramc / detail
  923. Another compile fix — galbramc / detail
  924. Corrected Vera errors — cwomack / detail
  925. More compile fixes — galbramc / detail
  926. Fix consistency test — galbramc / detail
  927. Modified Discretization unit tests to be consistent with linesearch — cwomack / detail
  928. Removed unused variable and changed abs -> fabs — cwomack / detail
  929. Fix parallel HField calculations. Fix couchmanMatrix for RANS. Cleanup Homotopy. Add the abilty to only get possessed DOF even for Statically Condensed systems. — galbramc / detail
  930. Fix compile errors — galbramc / detail
  931. Added updated VMSDBR2 projection. Default is off. To turn on define USE_FULLSPACE_PRJECTION_METHOD_2 at the top of your sandbox case. — blsc / detail
  932. sansBOOM PDE, BC, Output implementation for DGBR2 with advection and diffusion terms — darmofal / detail
  933. Adding two generalized cases to the sandbox to deal with gaps in avro use and SA RANS for adiabatic and isothermal flows. Will be good to keep these consistent with future homotopy and RANS changes — waligura / detail
  934. Removing flatplate xfld mesh option — waligura / detail
  935. removing xfield definition in supersonic case too — waligura / detail
  936. Fixed some missing instantiations needed for sansBOOM — darmofal / detail
  937. A couple more instantiations added... this time because the intel compiler was complaining (though the other compilers were fine... ARGH) — darmofal / detail
  938. Adjusting slightly tolerance on unit tests — darmofal / detail
  939. Updates to BDF time marching to allow ramping of integration order to provide the needed order-dependent past data — deanna.sewell / detail
  940. Modified line search test and removed residual dat file — cwomack / detail
  941. Cleanup BCmitAVsensor — galbramc / detail
  942. Forgot new files — galbramc / detail
  943. Allow Homotopy to use pre-defined BCVectors — galbramc / detail
  944. Make AVSensor_Source_VMSD_SPD consistent between 2D and 3D — galbramc / detail
  945. Fix compile errors — galbramc / detail
  946. vera fix — galbramc / detail
  947. Fix test for parallel — galbramc / detail
  948. Cleanup file dump — galbramc / detail
  949. Use Metric to compute HField_DG instead of size/perimiter — galbramc / detail
  950. Add ResidualNorm_InvJac_DOF_Weighted to VMSDBR2 — galbramc / detail
  951. Revert last change — galbramc / detail
  952. Fix compile error, and more verbose assertion — galbramc / detail
  953. Update unit tests — galbramc / detail
  954. Another unit test update — galbramc / detail
  955. Add ImpliedMetric for Line 2D element. — galbramc / detail
  956. Fix unit test — galbramc / detail
  957. Use SANS_CHECK_CLOSE — galbramc / detail
  958. Remove Burgers PDE — galbramc / detail
  959. Add dict function to DictKeyPair — galbramc / detail
  960. Added Axisymmetric DBL scalar function in 2D with unit tests — cwomack / detail
  961. Added vera exclusion for ScalarFunction2D — cwomack / detail
  962. Updates to sansBOOM including improved IC implementation including ability to read nearfield from a file and also more unit tests — darmofal / detail
  963. Compressible mechanical power calculation — galbramc / detail
  964. Missing a newline at end of ICsansBOOM.cpp.  Fixed. — darmofal / detail
  965. Added Axisymmetric flux functions + unit tests — cwomack / detail
  966. Missing a return statement — darmofal / detail
  967. Found sign error in upwind flux in sansBOOM. — darmofal / detail
  968. Fix compile error and warnings from new clang on macOS — galbramc / detail
  969. Relax tolerance — galbramc / detail
  970. Another warning fix — galbramc / detail
  971. A few more warning fixes — galbramc / detail
  972. More warning fixes for new clang — galbramc / detail
  973. One more warning fix — galbramc / detail
  974. Remove boost libary from external and add it to gitignore — galbramc / detail
  975. More cleanup — galbramc / detail
  976. Mechanical power correction — galbramc / detail
  977. Another mechanical power correction — galbramc / detail
  978. Remove Sensor template from AVSensor_Source3D_PressureGrad — galbramc / detail
  979. Fix compile error — galbramc / detail
  980. Return delta's for both LE and TE edges for BodyForces — galbramc / detail
  981. Add Deviation Angle Square output function for Body Forces — galbramc / detail
  982. Missing include — galbramc / detail
  983. More compile fixes — galbramc / detail
  984. Fix compile warnings — galbramc / detail
  985. Revert MechanicalPower calculation. Fix InteriorTrace partitioning for JacobianFunctionalInteriorTrace. Fixes for body force optimization. — galbramc / detail
  986. Use consistent limited gradients in PrimitiveSurrogate_btest — galbramc / detail
  987. Fix warnings — galbramc / detail
  988. Verbose output for computing BodyForce gradients — galbramc / detail
  989. Compile fix for using grid laplacian — galbramc / detail
  990. Fix PETSc/TAO deprecation warnings — galbramc / detail
  991. Update to supersonic test case — waligura / detail
  992. Working supersonic case for develop — waligura / detail
  993. Try again to see if tests time out — waligura / detail
  994. Add CompressiblePower calculation — galbramc / detail
  995. Additional unit tests for new sensor with RANS. Found and fixed a few bugs in PDERANSSA2D and PDEEuler3D. Cleaned up solver interface for VMSD-BR2 somewhat. More unit tests and tidy up to come. — blsc / detail
  996. Add another quadratic viscous term to Body Force model — galbramc / detail
  997. Updated surface flux writer for tecplot (VMSDBR2 specific). Added developer exceptions in to the Euler with artificial diffusion space-time calls since they're not unit tested. — blsc / detail
  998. Add 8th order term to Body Forces — galbramc / detail
  999. Added the ability to specify is artificial diffusion should be applied to SA equation at run time. More unit tests. Caught a few more bugs. — blsc / detail
  1000. More BodyForce output functionals — galbramc / detail
  1001. Add vera exclusions — galbramc / detail
  1002. Warning fixes — galbramc / detail
  1003. Properly ignore ._ files in CMake — galbramc / detail
  1004. Missing override keyword in SolverInterface_VMSD_BR2. ErrorOrder_2D_VMSDBR2_Triangle_AD_btest runs in serial (communicator is split and each rank runs independently). — blsc / detail
  1005. One more warning fix — galbramc / detail
  1006. Warning shows up in GNU 8 — galbramc / detail
  1007. Fix warning — galbramc / detail
  1008. Relax tolerances for intel — galbramc / detail
  1009. needsSolutionGradient set to true for EntropyPower functional — galbramc / detail
  1010. Add Entropy to rotor output — galbramc / detail
  1011. Updated tolerance for intel in AVSensor_Source3D_Euler_btest — blsc / detail
  1012. Fix EntropyPt calculation. Remove old Euler3D source test. — galbramc / detail
  1013. Relax tolerances for intel — galbramc / detail
  1014. More relaxed intel tolerances — galbramc / detail
  1015. One more method for VMSD data transfer — galbramc / detail
  1016. First draft of Axisymmetric DBL problem, vera not working, may require multiple commits to get through jenkins — cwomack / detail
  1017. Fixed scope issues — cwomack / detail
  1018. Removed untested upwind option from isothermal walls in PDENavierStokes2D. It did not seem to be being used by any sandbox case or test. — blsc / detail
  1019. fixed vera errors — cwomack / detail
  1020. Actually remove the code related to the upwind flag. — blsc / detail
  1021. added output axisymmetric unit tests — cwomack / detail
  1022. Changed unit test tolerance — cwomack / detail
  1023. Generalized axisym DBL for any z0 z1 — cwomack / detail
  1024. fixed vera errors — cwomack / detail

#1506 (Apr 14, 2022, 10:25:18 PM)

  1. Add missing include — galbramc / detail
  2. Allow multiple wall groups for BodyForce wall distance — galbramc / detail
  3. Compile error fix — galbramc / detail
  4. Warning fixes — galbramc / detail
  5. refactored IBL3 LF flux dissipation coefficient to avoid zero stabilization in the case of qe be tangent to element interface — shunz / detail
  6. turned on mass jump for 3D IBL3 4-eqn's LF flux: providing stabilization for flow transition (checked on ZPG flat plate transition case) — shunz / detail
  7. removed outdated closure models for 4-eqn IBL3 laminar flow — shunz / detail
  8. removed includes of outdated closure models — shunz / detail
  9. mucked with 4-eqn IBL3 on flat/torpedo case — shunz / detail
  10. intermediate commit...mucking with a sandbox case — shunz / detail
  11. added PDE functions needed for CG (GLS); most are non-functional and throw developer — allmaras / detail
  12. added verbose switch to turn on extra output for local solves; hard-coded to false — allmaras / detail
  13. instantiations needed for CG space-time of two-phase porous media — allmaras / detail
  14. made ctors more consistent with DG-BR2; needed for CG space-time two-phase — allmaras / detail
  15. fixed param builder call; code cleanup on BOUNDARY_INTEGRAL #ifdef — allmaras / detail
  16. minor tweak to verbose output — allmaras / detail
  17. mpi bug fix for verbose solution/jacobian dumps — allmaras / detail
  18. added VMSD and unstabilized CG test cases for benign 2D space-time two-phase; — allmaras / detail
  19. added diagnostics to SANS_ASSERT check — allmaras / detail
  20. Enable AFLR BL meshes — galbramc / detail
  21. added knob for controling added dissipation in LF flux for IBL3 — shunz / detail
  22. minor refactoring — shunz / detail
  23. Add PETSc numerica factorization time. Fix warning. Fix AFLR test. — galbramc / detail
  24. make IBLVarDataType3D templated, to allow for both Real and Surreal etc. — shunz / detail
  25. added symmetry (i.e. no crossflow) BC for 4-eqn IBL3 — shunz / detail
  26. refactored conservative variables, which is the sames as the previous version for incompressible flow — shunz / detail
  27. scaled ke and lc eqns by 1/qe^2, but it didn't fix the symmetry plane instability — shunz / detail
  28. added an exception for stagnation point in IBL3 4-eqn formulation — shunz / detail
  29. Added flag to choose whether to include the sensor equation in the residual calculation and convergence checks — blsc / detail
  30. Removed default parameters in PDEmitAVSensor constructors associated with including the sensor equation in the residual calculation — blsc / detail
  31. added easier macro toggle for turning on/off amp+lag equations — shunz / detail
  32. fix formatting — shunz / detail
  33. add exception for corner case — shunz / detail
  34. minor refactoring of torpedo case for IBL3 in sandbox — shunz / detail
  35. added but commented out a hack for trying power-law crossflow velocity distribution — shunz / detail
  36. added BC dict missing from a previous commit.  minor cleanup of 4-eqn IBL3 stuff — shunz / detail
  37. updated H22 turb closure — shunz / detail
  38. Add Kyle Anderson 'boosting', but dissabled for now — galbramc / detail
  39. Add rotor source tecplot dump — galbramc / detail
  40. test fix: added required Dirichlet data for PyDict — allmaras / detail
  41. added PyDict option for including viscous fluxes in BCNone (default = false, no viscous fluxes); — allmaras / detail
  42. corrected PDE/BC dump files — allmaras / detail
  43. Forgot a file — galbramc / detail
  44. Fix segfault — galbramc / detail
  45. Fix bug in lean for camber blade — galbramc / detail
  46. Add quadratic camberline — galbramc / detail
  47. Upgrade intel compiler — galbramc / detail
  48. Add some instantiations — galbramc / detail
  49. Update MKL path for Intel oneAPI — galbramc / detail
  50. Added Space Time Case — jta29 / detail
  51. Fixes for sansLIPAIM — galbramc / detail
  52. reverted turbulent Cf1 and Hs1 closure to 2D — shunz / detail
  53. minor tweaks/comments — shunz / detail
  54. Started another set of turbulent closure models by copying over existing ones — shunz / detail
  55. added turb Cf1 closure — shunz / detail
  56. added turb H*1 closure — shunz / detail
  57. Updated Insantiation — jta29 / detail
  58. updated CDc closure — shunz / detail
  59. updated turb Cf2 closure — shunz / detail
  60. updated turb Hc2 closure — shunz / detail
  61. fixed function signature — shunz / detail
  62. fixed typo in function call. switched default to using new regularized turb closure — shunz / detail
  63. switched back to using 2D turb H*1 closure — shunz / detail
  64. Remove trailing white space — jta29 / detail
  65. Removed trailing white space — jta29 / detail
  66. added output of closure model derivatives for IBL3 flux system eigen-analysis — shunz / detail
  67. fixed line-length squawk — allmaras / detail
  68. Minor cleanup — galbramc / detail
  69. Fix instantiations — galbramc / detail
  70. made PyDict required parameter in ctor; moved discretization/stabilization parameter — allmaras / detail
  71. made SolutionData* unit tests consistent with ctors — allmaras / detail
  72. made sandbox codes consistent with changes to SolutionData*: (a) PyDict parameter — allmaras / detail
  73. removed new unit test (committed too soon) — allmaras / detail
  74. fixed unused variable squawk — allmaras / detail
  75. moved stabilization parameter next to PDE consistent with SolutionData* — allmaras / detail
  76. move stab parameter in SolutionData call — allmaras / detail
  77. made system tests consistent with SolutionData* — allmaras / detail
  78. removed duplicate look-up filename definitions — allmaras / detail
  79. added required PyDict() argument to SolutionData* — allmaras / detail
  80. removed CG two-phase test case (will bring it back later) — allmaras / detail
  81. making file name conventions consistent: "Galerkin_Stablized" is anything involving — allmaras / detail
  82. line length squawk — allmaras / detail
  83. Nightly fixes — galbramc / detail
  84. fixed some "_Stabilized" typos; removed unused includes from VMSD toys — allmaras / detail
  85. fixed "_Stabilized" typos — allmaras / detail
  86. fixed constructor bug for var args; now all ctors are consistent in "BCArgs&&... args" — allmaras / detail
  87. Fix SANS_Commit script — galbramc / detail
  88. Fix warning — galbramc / detail
  89. Correct Brenner AV in 2D and add 3D — galbramc / detail
  90. Arrary bound fix — galbramc / detail
  91. Warning fixes and relax nightly tolerance — galbramc / detail
  92. Don't try to use solutions from diverged linear solver — galbramc / detail
  93. added second generalized-H tensor that gives M-type grid Laplacian; it is the — allmaras / detail
  94. added second path that assumes incoming H field is same as original H^2 (computed — allmaras / detail
  95. added second path that assumes incoming H field is J*J^t (computed — allmaras / detail
  96. uncommented scaleArtificialViscosity function needed for Homotopy; added unit tests — allmaras / detail
  97. fixed scalar-h code for 1D; clean-up for 2D/3D — allmaras / detail
  98. added prescribed CD(x,y) field — shunz / detail
  99. Various small cleanups — galbramc / detail
  100. added optional vertex coordinates for single triangle/tet constructors — allmaras / detail
  101. Update unit tests — galbramc / detail
  102. Missed one — galbramc / detail
  103. Added prescribed CD field for inversion of CDiss correction factor beta — shunz / detail
  104. Encapsulate regularization constants in one header — hcarson / detail
  105. style ding — hcarson / detail
  106. minor tweaks of torpedo case IBL3 setup — shunz / detail
  107. Dump out unconverged restart files — galbramc / detail
  108. Dump out unconverged restart files — galbramc / detail
  109. Added lines for extracting final qfld — hcarson / detail
  110. Add AV to SA equation in 3D — galbramc / detail
  111. Fix surreal type — galbramc / detail
  112. Fix surreal type — galbramc / detail
  113. Mucking with a correction multiplier term to the dissipation relation — shunz / detail
  114. fixed long lines — shunz / detail
  115. Update test for previous commit — galbramc / detail
  116. mucking with dissipation relation inversion — shunz / detail
  117. Use MKL_PARDISO for PETSc DirectLU solver — galbramc / detail
  118. Only use one thread for DirectLU MKL_PARDISO — galbramc / detail
  119. move the PETSc solve time print — galbramc / detail
  120. Add PETSc option to scale by diagonal — galbramc / detail
  121. Added but commented out hacks with inflow BC bump/step features — shunz / detail
  122. Added a few prescribed CD(x,y) field based on RANS data — shunz / detail
  123. fillSystemVector syncs MPI DOF. Fix Sensor symmetry BC for 3D. More parallel testing with NaN's — galbramc / detail
  124. added new beta closure — shunz / detail
  125. Fix compile errors — galbramc / detail
  126. Fix compile errors — galbramc / detail
  127. Refactor isValidState checks in parallel — galbramc / detail
  128. Compile fix — galbramc / detail
  129. One more isValidState fix — galbramc / detail
  130. Add positive preserving source for 3D. Dissabled for now. — galbramc / detail
  131. Compile fix — galbramc / detail
  132. Add some asserts to 'Node Rank' for xfld tecplot dump — galbramc / detail
  133. adding curvilinear transformation functionality — ursachi / detail
  134. missed some files — ursachi / detail
  135. Also dump out xfld spirit — galbramc / detail
  136. Add set_dot and continuously relax sewFace tolerances for CamberBlade LE and TE surfaces. — galbramc / detail
  137. Format fix — galbramc / detail
  138. Fix the last fix — galbramc / detail
  139. Actually fix the fix of the last fix for the previous fix — galbramc / detail
  140. Add UpdateFraction to Galerkin Stabilized — galbramc / detail
  141. Added macro to toggle the use of prescribed CD(x,y) field — shunz / detail
  142. Allow MaxChangeFraction to work with SteveLogic — galbramc / detail
  143. Skip zombie DOF for UpdateFraction check — galbramc / detail
  144. fixed outdated class template argument — shunz / detail
  145. More fixes to allow UpdateFraction with SteveLogic — galbramc / detail
  146. Don't mix units — galbramc / detail
  147. fixed more outdated class template argument — shunz / detail
  148. Fix unit tests — galbramc / detail
  149. EmbeddedCGField fixes — galbramc / detail
  150. Fix one more missing EmbeddedCGField — galbramc / detail
  151. Updated Bernstein bases for use in CG fields. We dont have Hessians implemented, so stabilized CG needed a change to only calculate Hessians if we have stabilization turned off. To go above p3 in 3D CG, we need to change the basis functions to be match our implied ordering. Since Bernstein polynomials are modal and not hierarchical, we need to solve a linear system to do projections between orders. — blsc / detail
  152. Fixed unit tests.  Turned off the correction when ctau surpasses ctau_Tinit in 3D IBL_foureqn — shunz / detail
  153. Added 4D Bernstein bases (linear) on pentatope, with CG and DG fields — blsc / detail
  154. updated pyrite files for IBL3 four eqn laminar — shunz / detail
  155. fixed undefined references — shunz / detail
  156. git was not happy about the commit message...trying to fix it here..this commit is about adding definition of static class members in cpp file — shunz / detail
  157. added transformation function to ghost boundaries — ursachi / detail
  158. added test case — ursachi / detail
  159. cleaned up test case — ursachi / detail
  160. Adding adapt case with P1 corner singularity divergence weirdness. P2 and 3 are fine, but P1 error blows up 4 orders of magnitude.... — hcarson / detail
  161. Update tolerances on L2 project tests for Bernstein bases. Fix NaN issue with auxiliary problem for Homotopy. — blsc / detail
  162. Update tolerances for intel — blsc / detail
  163. Add Lagrange Node tecplot dump for CG fields — galbramc / detail
  164. Fix last commit — galbramc / detail
  165. added PyDict parameter (StatusOKatMaxIterations) to change status when solver hits — allmaras / detail
  166. Updated tecplot CG dump — galbramc / detail
  167. Compile fix — galbramc / detail
  168. added annotation — shunz / detail
  169. Allow zero bodies in a model — galbramc / detail
  170. Add Cylindrical system for C