Changes
#86 (Dec 3, 2019, 12:25:47 PM)
- list to array fix in node ordering — rebeccae.morrison / bitbucketweb
- removed testing statements from SING — rebeccae.morrison / bitbucketweb
- multimodal gp plot — rebeccae.morrison / bitbucketweb
- laplacian eigenvector graphs — rebeccae.morrison / bitbucketweb
- modified truncation step to retain always old indices — dabi / bitbucketweb
- left-over changes — dabi / bitbucketweb
- started working on some examples — dabi / bitbucketweb
- working on euler bernoulli — dabi / bitbucketweb
- working on bod — dabi / bitbucketweb
- started with the a sketch of the algorithm — dabi / bitbucketweb
- working on algorithm — dabi / bitbucketweb
- lazy map implementation for BOD — dabi / bitbucketweb
- started algorithm for lazy map in Algorithms — dabi / bitbucketweb
- working on banana — dabi / bitbucketweb
- working on banana — dabi / bitbucketweb
- soft truncation, i.e. nearly linear map works better than hard truncation (which does not work at all but in few cases) — dabi / bitbucketweb
- playing with orders — dabi / bitbucketweb
- working on the generation of the distribution — dabi / bitbucketweb
- setup for Lorenz63 done — dabi / bitbucketweb
- some fixes for sequential data assimilation — dabi / bitbucketweb
- working on linear map approximation — dabi / bitbucketweb
- figuring out what's wrong... — dabi / bitbucketweb
- added testing of gradients for distributions — dabi / bitbucketweb
- added tests for gradients of distributions and tried on Lorenz63 — dabi / bitbucketweb
- working on forward Euler map — dabi / bitbucketweb
- working on Forward Euler — dabi / bitbucketweb
- fixed Lorenz63 and added ODEs discretization maps to the framework — dabi / bitbucketweb
- started implementation of Lorenz 96 — dabi / bitbucketweb
- working on Lorenz96 — dabi / bitbucketweb
- added the possibility of skipping prediction steps by composing Euler maps — dabi / bitbucketweb
- added rmse output for smoothing — dabi / bitbucketweb
- lorenz 96 distribution ready — dabi / bitbucketweb
- starting to generate distribution for Lorenz96 — dabi / bitbucketweb
- dynamics generated correctly — dabi / bitbucketweb
- working on the generator of maps with prescribed sparsity for L96 — dabi / bitbucketweb
- working on the generator of maps with prescribed sparsity for L96 — dabi / bitbucketweb
- working on loading maps for L96 — dabi / bitbucketweb
- working on postprocessing — dabi / bitbucketweb
- working on results for AGU — dabi / bitbucketweb
- working on results for AGU — dabi / bitbucketweb
- added missing files l96 — dabi / bitbucketweb
- fixed documentation — dabi / bitbucketweb
- gumbel example re-run for documentation — dabi / bitbucketweb
- working on time plotting of l63 — dabi / bitbucketweb
- fixed low-rank approximation for outer grad (lis) to not compute multiple likelihoods — dabi / bitbucketweb
- fixed low-rank approximation for outer grad (lis) to not compute multiple likelihoods — dabi / bitbucketweb
- working on reduced basis extraction — dabi / bitbucketweb
- working on reduced basis extraction — dabi / bitbucketweb
- working on low-rank filter — dabi / bitbucketweb
- working on low-rank for filtering — dabi / bitbucketweb
- working on generation of maps for low-rank approximations — dabi / bitbucketweb
- working on generation of maps for low-rank approximations — dabi / bitbucketweb
- experimenting with low-rank — dabi / bitbucketweb
- working on low-rank l96 — dabi / bitbucketweb
- working on low-rank l96 — dabi / bitbucketweb
- working on L96 M2 — dabi / bitbucketweb
- working on L96 M2 — dabi / bitbucketweb
- working on L96 M2 — dabi / bitbucketweb
- working on gradient of L96 model II — dabi / bitbucketweb
- cython implementation of gradient works — dabi / bitbucketweb
- action of hessian works for L96 model 2 — dabi / bitbucketweb
- working on preconditioning — dabi / bitbucketweb
- working on l96 m2 — dabi / bitbucketweb
- working on l96 m2 — dabi / bitbucketweb
- running l96 m2 — dabi / bitbucketweb
- preparing linear maps for low-rank model — dabi / bitbucketweb
- re-factoring some nomenclature for hidden Markov chains — dabi / bitbucketweb
- re-factoring some nomenclature for hidden Markov chains — dabi / bitbucketweb
- modal l96 model 2 done — dabi / bitbucketweb
- fixed tmap-seq-tm — dabi / bitbucketweb
- working on filtering preconditioning — dabi / bitbucketweb
- preconditioning through filter almost works — dabi / bitbucketweb
- working on both l96 and l63 — dabi / bitbucketweb
- filter preconditioning works!! — dabi / bitbucketweb
- prepared filtering preconditioning for l96 — dabi / bitbucketweb
- preconditioning through filtering works for l96 — dabi / bitbucketweb
- mpi_map now updates automatically the counters of the methods called on an object — dabi / bitbucketweb
- l96 with filter preconditioning works. NEXT: remove 1st step of smoother (first lag-1 smoothing) and substitute with the regular step using the 0-th filtering (0-th step inference problem) — dabi / bitbucketweb
- removed skip-first and made 0th step to be included in the final map. So the first map in the composition does not involve a transition — dabi / bitbucketweb
- working on combination of filt preconditioner and low-rank preconditioner — dabi / bitbucketweb
- low-rank preconditioning works with filter preconditioning — dabi / bitbucketweb
- working on lr l96 — dabi / bitbucketweb
- working on l96 — dabi / bitbucketweb
- working on l96 lr — dabi / bitbucketweb
- going.. — dabi / bitbucketweb
- working on banded maps — dabi / bitbucketweb
- fixed unit tests for test_derivatives functions — dabi / bitbucketweb
- now LinearSpanApproximation uses a semilattice for multiindex and coefficients storage — dabi / bitbucketweb
- passing tests — dabi / bitbucketweb
- semilattice constructors exposed in default transport map constructors — dabi / bitbucketweb
- experimenting low-rank subspace ideas — dabi / bitbucketweb
- fixed init coeffs bug — dabi / bitbucketweb
- fixed semilattice data structure for serialization — dabi / bitbucketweb
- fixed bugs in tests — dabi / bitbucketweb
- reshaped tests — dabi / bitbucketweb
- passes all tests — dabi / bitbucketweb
- working on fv linear candidate map — dabi / bitbucketweb
- semilattices integrated into adaptivity. To be tested! The spirit is there though. — dabi / bitbucketweb
- semilattices integrated into adaptivity algorithm. fixes #92 — dabi / bitbucketweb
- changed format of semilattices for linear span — dabi / bitbucketweb
- changed format of semilattices for linear span — dabi / bitbucketweb
- fixed callback parameter minimize kl. — dabi / bitbucketweb
- changed active_set to SortedSet to preserve iteration order after serialization (for parallel computing purposes) — dabi / bitbucketweb
- added LinearSpanVertex to the exposed classes — dabi / bitbucketweb
- fixed bug in LinearMap (defined twice...) — dabi / bitbucketweb
- working on constructor — dabi / bitbucketweb
- started on poisson — dabi / bitbucketweb
- working on runner for poisson — dabi / bitbucketweb
- embedding the deep lazy map construction into the builder cycle — dabi / bitbucketweb
- transformed tmap-tm in the logic of CLI. to be tested by doing... — dabi / bitbucketweb
- restructuring all the building architecture — dabi / bitbucketweb
- restructuring of building architecture done. todo on sequential algorithm as well. — dabi / bitbucketweb
- working on reshaping of builders — dabi / bitbucketweb
- some fixes after big merge. Going to branch off this in order to debug and work on Lazy maps at the same time — dabi / bitbucketweb
- working on the runner for lazy maps — dabi / bitbucketweb
- fixing here and there — dabi / bitbucketweb
- working on the lazy map script — dabi / bitbucketweb
- working on scripts for lazy maps — dabi / bitbucketweb
- working on scripts for lazy maps — dabi / bitbucketweb
- fixing new interface — dabi / bitbucketweb
- testing tmap-deep-lazy-tm — dabi / bitbucketweb
- testing tmap-deep-lazy-tm — dabi / bitbucketweb
- testing... — dabi / bitbucketweb
- script runs — dabi / bitbucketweb
- working on poisson with lazy maps — dabi / bitbucketweb
- working on poisson with lazy maps — dabi / bitbucketweb
- working on poisson problem — dabi / bitbucketweb
- working on taxonomy structure — dabi / bitbucketweb
- added missing file — dabi / bitbucketweb
- fixes for cse presentation on Lazy maps — dabi / bitbucketweb
- ... — dabi / bitbucketweb
- going on with taxonomy — dabi / bitbucketweb
- working on distributions — dabi / bitbucketweb
- ... — dabi / bitbucketweb
- working on taxonomy for distributions — dabi / bitbucketweb
- working on taxonomy — dabi / bitbucketweb
- advancing with distributions — dabi / bitbucketweb
- working on decomposable distributions... — dabi / bitbucketweb
- working on decomposable taxonomy — dabi / bitbucketweb
- working on Maps — dabi / bitbucketweb
- ... — dabi / bitbucketweb
- ... — dabi / bitbucketweb
- added Functionals module — dabi / bitbucketweb
- done with Functionals — dabi / bitbucketweb
- adde Likelihoods — dabi / bitbucketweb
- fixed edge — dabi / bitbucketweb
- Started with the refactoring of the code... Things breaks from here... — dabi / bitbucketweb
- working on Maps module refactoring — dabi / bitbucketweb
- ... — dabi / bitbucketweb
- ... — dabi / bitbucketweb
- started working on TriangularCompoentwiseTransportMap — dabi / bitbucketweb
- ... — dabi / bitbucketweb
- ... — dabi / bitbucketweb
- ... — dabi / bitbucketweb
- working on ListCompositeTransportMapBase — dabi / bitbucketweb
- done with ListCompositeTransportMap — dabi / bitbucketweb
- done with InverseTransportMap — dabi / bitbucketweb
- ... — dabi / bitbucketweb
- working on AffineMaps — dabi / bitbucketweb
- ... — dabi / bitbucketweb
- ... — dabi / bitbucketweb
- ... — dabi / bitbucketweb
- ... — dabi / bitbucketweb
- starting with debugging of Maps — dabi / bitbucketweb
- starting with debugging of Maps — dabi / bitbucketweb
- ... — dabi / bitbucketweb
- unit testing Maps — dabi / bitbucketweb
- working on unittest Maps — dabi / bitbucketweb
- working on unit tests... — dabi / bitbucketweb
- working on unittests — dabi / bitbucketweb
- passes test_transportmaps — dabi / bitbucketweb
- fixed most of unittests... — dabi / bitbucketweb
- some other fixes — dabi / bitbucketweb
- working on distributions — dabi / bitbucketweb
- distributions done — dabi / bitbucketweb
- adding missing file — dabi / bitbucketweb
- working on Functionals — dabi / bitbucketweb
- testing Functionals — dabi / bitbucketweb
- updated distribution — dabi / bitbucketweb
- some fixed — dabi / bitbucketweb
- fixing unittests — dabi / bitbucketweb
- some fixes — dabi / bitbucketweb
- working on reaction diffusion problem — dabi / bitbucketweb
- working on pdes — dabi / bitbucketweb
- fitz hugh — dabi / bitbucketweb
- still picking a pde... — dabi / bitbucketweb
- left two l2 minimization errors... — dabi / bitbucketweb
- passes all tests — dabi / bitbucketweb
- picking pde... — dabi / bitbucketweb
- added missing file — dabi / bitbucketweb
- working on Burgers test problem — dabi / bitbucketweb
- working on burgers; — dabi / bitbucketweb
- working on Burgers — dabi / bitbucketweb
- working on Burgers — dabi / bitbucketweb
- generating distribution — dabi / bitbucketweb
- working on burgers Laplace approximation — dabi / bitbucketweb
- fix committed for mpi with inverse from samples. The mpi_pool is not attached to objects anymore (so that it will be never serialized), but passed along with parameters — dabi / bitbucketweb
- additional fixes — dabi / bitbucketweb
- working on Burgers — dabi / bitbucketweb
- adding Hessian — dabi / bitbucketweb
- added plotting of generated samples — dabi / bitbucketweb
- working on Burgers — dabi / bitbucketweb
- modified gradboot stopping criterion — dabi / bitbucketweb
- updates... — dabi / bitbucketweb
- fixed semilattice handling in adaptation and many other things.. — dabi / bitbucketweb
- adding TC setting for Poisson equation — dabi / bitbucketweb
- working on Poisson — dabi / bitbucketweb
- ... — dabi / bitbucketweb
- adjoint of log-likelihood cost works... — dabi / bitbucketweb
- working on Poisson generation — dabi / bitbucketweb
- working on transforming Functionals into Maps — dabi / bitbucketweb
- moving Functionals into Maps — dabi / bitbucketweb
- updated taxonomy... needs to reflect the fact that Functionals is a submodule of Maps — dabi / bitbucketweb
- fixed taxonomy — dabi / bitbucketweb
- fixing unit tests — dabi / bitbucketweb
- added deprecation message if importing TransportMaps.Functionals — dabi / bitbucketweb
- working on unittests and fixed some docs — dabi / bitbucketweb
- fixed dependencies — dabi / bitbucketweb
- passing unit tests — dabi / bitbucketweb
- added speed test for Poisson — dabi / bitbucketweb
- working on Poisson — dabi / bitbucketweb
- working on Poisson. Introduced action_grad_x in order to speed up in certain cases — dabi / bitbucketweb
- making Functionals into maps with output in one dimension. This will allow the use of all the machinery available for maps (composition etc) also for functionals... — dabi / bitbucketweb
- working on unit tests... — dabi / bitbucketweb
- added title to taxonomy — dabi / bitbucketweb
- all tests pass — dabi / bitbucketweb
- fixed merge with Functionals->Maps. Working on Poisson. Fixed taxonomy. — dabi / bitbucketweb
- RejectionSampler + multi dim uniform — dabi / bitbucketweb
- working on poisson — dabi / bitbucketweb
- working on dimension reduction... — dabi / bitbucketweb
- working on poisson — dabi / bitbucketweb
- working on Cantilever — dabi / bitbucketweb
- adding missing file — dabi / bitbucketweb
- working on timoshenko — dabi / bitbucketweb
- working on banana — dabi / bitbucketweb
- working on lazy with identity tails — dabi / bitbucketweb
- lazy maps have now an identity tail — dabi / bitbucketweb
- working on timoshenko — dabi / bitbucketweb
- working on the generation of the target distribution — dabi / bitbucketweb
- working on Timoshenko distribution — dabi / bitbucketweb
- added puwr ess routine :) — dabi / bitbucketweb
- timoshenko... — dabi / bitbucketweb
- working on timoshenko — dabi / bitbucketweb
- working on timoshenko — dabi / bitbucketweb
- timoshenko set up done — dabi / bitbucketweb
- timoshenko works O_O' — dabi / bitbucketweb
- postprocessing timoshenko — dabi / bitbucketweb
- working on timoshenko — dabi / bitbucketweb
- hard truncation is back.. — dabi / bitbucketweb
- improved action_grad_x with action_adjoint_grad_x to compute gradients left to right if output < input — dabi / bitbucketweb
- improved action_grad_x with action_adjoint_grad_x to compute gradients left to right if output < input — dabi / bitbucketweb
- implementing missing adjoint functions — dabi / bitbucketweb
- Done with LogCox for Lazy maps — dabi / bitbucketweb
- working on cantilever — dabi / bitbucketweb
- staring with Poisson — dabi / bitbucketweb
- added IdentityEmbeddedParametricTransprotMap and made minimize_kl_divergence general for any parametric transport map — dabi / bitbucketweb
- added dolfin version markers/warnings for solvers — dabi / bitbucketweb
- modified ess reporting — dabi / bitbucketweb
- working on timoshenko — dabi / bitbucketweb
- going on with plots — dabi / bitbucketweb
- timoshenko plots — dabi / bitbucketweb
- poisson plots — dabi / bitbucketweb
- preparing code for submission NIPS — dabi / bitbucketweb
- working on Poisson... — dabi / bitbucketweb
- modified poisson distribution (with diagonal likielihood) to allow for lis type model reduction — dabi / bitbucketweb
- Laplace approximation log output to INFO — dabi / bitbucketweb
- test-source.sh added PATH for Jenkins — dabi / bitbucketweb
- update setup — rsb / bitbucketweb
- updating setup — rsb / bitbucketweb
- updating default map call — rsb / bitbucketweb
- working on poisson — dabi / bitbucketweb
- updating to TMv3 — rsb / bitbucketweb
- updating hess x to TM v3 — rsb / bitbucketweb
- updating numerical examples for SING — rsb / bitbucketweb
- fixing tests — dabi / bitbucketweb
- fixed unit tests — dabi / bitbucketweb
- added pip install cython in jenkins script — dabi / bitbucketweb
- added .pyx to the manifest — dabi / bitbucketweb
- updated jenkins script — dabi / bitbucketweb
- working on jenkins script — dabi / bitbucketweb
- passing all tests and updated jenkins scripts — dabi / bitbucketweb
- fixed construction script — dabi / bitbucketweb
- made CYTHON submodules optional — dabi / bitbucketweb
- made CYTHON submodules optional — dabi / bitbucketweb
- workign on random rotations — dabi / bitbucketweb
- working on LogisticRegression model — dabi / bitbucketweb
- working on parkinson — dabi / bitbucketweb
- done likelikhood — dabi / bitbucketweb
- distribution generation done — dabi / bitbucketweb
- working on results for logit problem — dabi / bitbucketweb
- working on differente settings for parkinson — dabi / bitbucketweb
- working on posterior predictive — dabi / bitbucketweb
- mod to logit likelihood — dabi / bitbucketweb
- working on stan example — dabi / bitbucketweb
- working on stan example — dabi / bitbucketweb
- fixed bug in adjoint_grad_x for composite maps — dabi / bitbucketweb
- working on parkinson dataset — dabi / bitbucketweb
- working on parkinson data set — dabi / bitbucketweb
- fixed log-likelihood for logistic regression models with log(1+\eps) approximation — dabi / bitbucketweb
- fixed bug in hess_x_log_pullback function — dabi / bitbucketweb
- renamed aux for windows benefit... — dabi / bitbucketweb
- auxiliary.... — dabi / bitbucketweb
#85 (Oct 24, 2019, 5:22:11 AM)
- list to array fix in node ordering — rebeccae.morrison / bitbucketweb
- removed testing statements from SING — rebeccae.morrison / bitbucketweb
- multimodal gp plot — rebeccae.morrison / bitbucketweb
- laplacian eigenvector graphs — rebeccae.morrison / bitbucketweb
- update setup — rsb / bitbucketweb
- updating setup — rsb / bitbucketweb
- updating default map call — rsb / bitbucketweb
- updating to TMv3 — rsb / bitbucketweb
- updating hess x to TM v3 — rsb / bitbucketweb
- updating numerical examples for SING — rsb / bitbucketweb
- auxiliary.... — dabi / bitbucketweb
#84 (Oct 24, 2019, 3:35:25 AM)
- fixed documentation — dabi / bitbucketweb
- gumbel example re-run for documentation — dabi / bitbucketweb
- fix committed for mpi with inverse from samples. The mpi_pool is not attached to objects anymore (so that it will be never serialized), but passed along with parameters — dabi / bitbucketweb
- additional fixes — dabi / bitbucketweb
- test-source.sh added PATH for Jenkins — dabi / bitbucketweb
- renamed aux for windows benefit... — dabi / bitbucketweb
#83 (Aug 5, 2019, 9:53:36 AM)
- preparing code for submission NIPS — dabi / bitbucketweb
- workign on random rotations — dabi / bitbucketweb
- working on LogisticRegression model — dabi / bitbucketweb
- working on parkinson — dabi / bitbucketweb
- done likelikhood — dabi / bitbucketweb
- distribution generation done — dabi / bitbucketweb
- working on results for logit problem — dabi / bitbucketweb
- working on differente settings for parkinson — dabi / bitbucketweb
- working on posterior predictive — dabi / bitbucketweb
- mod to logit likelihood — dabi / bitbucketweb
- working on stan example — dabi / bitbucketweb
- working on stan example — dabi / bitbucketweb
- working on parkinson dataset — dabi / bitbucketweb
- working on parkinson data set — dabi / bitbucketweb
- fixed log-likelihood for logistic regression models with log(1+\eps) approximation — dabi / bitbucketweb
#82 (Aug 4, 2019, 1:03:34 PM)
- fixed bug in hess_x_log_pullback function — dabi / bitbucketweb
#81 (Aug 1, 2019, 2:30:14 PM)
- fixed bug in adjoint_grad_x for composite maps — dabi / bitbucketweb
#80 (Jul 25, 2019, 3:22:13 PM)
- made CYTHON submodules optional — dabi / bitbucketweb
#79 (Jul 25, 2019, 1:53:35 PM)
- made CYTHON submodules optional — dabi / bitbucketweb
#78 (Jul 25, 2019, 10:10:31 AM)
- fixed construction script — dabi / bitbucketweb
#76 (Jul 24, 2019, 5:26:56 PM)
- passing all tests and updated jenkins scripts — dabi / bitbucketweb
#75 (Jul 24, 2019, 4:31:54 PM)
- working on jenkins script — dabi / bitbucketweb
#74 (Jul 24, 2019, 4:30:06 PM)
- updated jenkins script — dabi / bitbucketweb
#73 (Jul 24, 2019, 4:27:25 PM)
- added .pyx to the manifest — dabi / bitbucketweb
#72 (Jul 24, 2019, 4:08:38 PM)
- added pip install cython in jenkins script — dabi / bitbucketweb
#71 (Jul 24, 2019, 4:05:21 PM)
- fixing tests — dabi / bitbucketweb
- fixed unit tests — dabi / bitbucketweb
#70 (Jun 13, 2019, 2:44:41 PM)
- working on Poisson... — dabi / bitbucketweb
- modified poisson distribution (with diagonal likielihood) to allow for lis type model reduction — dabi / bitbucketweb
- working on poisson — dabi / bitbucketweb
#68 (Jun 10, 2019, 4:15:58 PM)
- Laplace approximation log output to INFO — dabi / bitbucketweb
#67 (May 24, 2019, 3:40:56 PM)
- working on poisson problem — dabi / bitbucketweb
- fixes for cse presentation on Lazy maps — dabi / bitbucketweb
- working on reaction diffusion problem — dabi / bitbucketweb
- working on pdes — dabi / bitbucketweb
- fitz hugh — dabi / bitbucketweb
- still picking a pde... — dabi / bitbucketweb
- picking pde... — dabi / bitbucketweb
- working on Burgers test problem — dabi / bitbucketweb
- working on burgers; — dabi / bitbucketweb
- working on Burgers — dabi / bitbucketweb
- working on Burgers — dabi / bitbucketweb
- generating distribution — dabi / bitbucketweb
- working on burgers Laplace approximation — dabi / bitbucketweb
- working on Burgers — dabi / bitbucketweb
- adding Hessian — dabi / bitbucketweb
- added plotting of generated samples — dabi / bitbucketweb
- working on Burgers — dabi / bitbucketweb
- modified gradboot stopping criterion — dabi / bitbucketweb
- updates... — dabi / bitbucketweb
- fixed semilattice handling in adaptation and many other things.. — dabi / bitbucketweb
- adding TC setting for Poisson equation — dabi / bitbucketweb
- working on Poisson — dabi / bitbucketweb
- ... — dabi / bitbucketweb
- adjoint of log-likelihood cost works... — dabi / bitbucketweb
- working on Poisson generation — dabi / bitbucketweb
- added speed test for Poisson — dabi / bitbucketweb
- working on Poisson — dabi / bitbucketweb
- working on Poisson. Introduced action_grad_x in order to speed up in certain cases — dabi / bitbucketweb
- added title to taxonomy — dabi / bitbucketweb
- fixed merge with Functionals->Maps. Working on Poisson. Fixed taxonomy. — dabi / bitbucketweb
- RejectionSampler + multi dim uniform — dabi / bitbucketweb
- working on poisson — dabi / bitbucketweb
- working on dimension reduction... — dabi / bitbucketweb
- working on poisson — dabi / bitbucketweb
- working on Cantilever — dabi / bitbucketweb
- adding missing file — dabi / bitbucketweb
- working on timoshenko — dabi / bitbucketweb
- working on banana — dabi / bitbucketweb
- working on lazy with identity tails — dabi / bitbucketweb
- lazy maps have now an identity tail — dabi / bitbucketweb
- working on timoshenko — dabi / bitbucketweb
- working on the generation of the target distribution — dabi / bitbucketweb
- working on Timoshenko distribution — dabi / bitbucketweb
- added puwr ess routine :) — dabi / bitbucketweb
- timoshenko... — dabi / bitbucketweb
- working on timoshenko — dabi / bitbucketweb
- working on timoshenko — dabi / bitbucketweb
- timoshenko set up done — dabi / bitbucketweb
- timoshenko works O_O' — dabi / bitbucketweb
- postprocessing timoshenko — dabi / bitbucketweb
- working on timoshenko — dabi / bitbucketweb
- hard truncation is back.. — dabi / bitbucketweb
- improved action_grad_x with action_adjoint_grad_x to compute gradients left to right if output < input — dabi / bitbucketweb
- improved action_grad_x with action_adjoint_grad_x to compute gradients left to right if output < input — dabi / bitbucketweb
- implementing missing adjoint functions — dabi / bitbucketweb
- Done with LogCox for Lazy maps — dabi / bitbucketweb
- working on cantilever — dabi / bitbucketweb
- staring with Poisson — dabi / bitbucketweb
- added IdentityEmbeddedParametricTransprotMap and made minimize_kl_divergence general for any parametric transport map — dabi / bitbucketweb
- added dolfin version markers/warnings for solvers — dabi / bitbucketweb
- modified ess reporting — dabi / bitbucketweb
- working on timoshenko — dabi / bitbucketweb
- going on with plots — dabi / bitbucketweb
- timoshenko plots — dabi / bitbucketweb
- poisson plots — dabi / bitbucketweb
#66 (Apr 18, 2019, 11:01:37 AM)
- making Functionals into maps with output in one dimension. This will allow the use of all the machinery available for maps (composition etc) also for functionals... — dabi / bitbucketweb
- working on unit tests... — dabi / bitbucketweb
- all tests pass — dabi / bitbucketweb
#65 (Apr 17, 2019, 11:43:17 AM)
- working on transforming Functionals into Maps — dabi / bitbucketweb
- moving Functionals into Maps — dabi / bitbucketweb
- updated taxonomy... needs to reflect the fact that Functionals is a submodule of Maps — dabi / bitbucketweb
- fixed taxonomy — dabi / bitbucketweb
- fixing unit tests — dabi / bitbucketweb
- added deprecation message if importing TransportMaps.Functionals — dabi / bitbucketweb
- working on unittests and fixed some docs — dabi / bitbucketweb
- fixed dependencies — dabi / bitbucketweb
- passing unit tests — dabi / bitbucketweb
#64 (Mar 26, 2019, 3:42:33 PM)
- added missing file — dabi / bitbucketweb
#63 (Mar 25, 2019, 2:37:43 PM)
- working on taxonomy structure — dabi / bitbucketweb
- added missing file — dabi / bitbucketweb
- ... — dabi / bitbucketweb
- going on with taxonomy — dabi / bitbucketweb
- working on distributions — dabi / bitbucketweb
- ... — dabi / bitbucketweb
- working on taxonomy for distributions — dabi / bitbucketweb
- working on taxonomy — dabi / bitbucketweb
- advancing with distributions — dabi / bitbucketweb
- working on decomposable distributions... — dabi / bitbucketweb
- working on decomposable taxonomy — dabi / bitbucketweb
- working on Maps — dabi / bitbucketweb
- ... — dabi / bitbucketweb
- ... — dabi / bitbucketweb
- added Functionals module — dabi / bitbucketweb
- done with Functionals — dabi / bitbucketweb
- adde Likelihoods — dabi / bitbucketweb
- fixed edge — dabi / bitbucketweb
- Started with the refactoring of the code... Things breaks from here... — dabi / bitbucketweb
- working on Maps module refactoring — dabi / bitbucketweb
- ... — dabi / bitbucketweb
- ... — dabi / bitbucketweb
- started working on TriangularCompoentwiseTransportMap — dabi / bitbucketweb
- ... — dabi / bitbucketweb
- ... — dabi / bitbucketweb
- ... — dabi / bitbucketweb
- working on ListCompositeTransportMapBase — dabi / bitbucketweb
- done with ListCompositeTransportMap — dabi / bitbucketweb
- done with InverseTransportMap — dabi / bitbucketweb
- ... — dabi / bitbucketweb
- working on AffineMaps — dabi / bitbucketweb
- ... — dabi / bitbucketweb
- ... — dabi / bitbucketweb
- ... — dabi / bitbucketweb
- ... — dabi / bitbucketweb
- starting with debugging of Maps — dabi / bitbucketweb
- starting with debugging of Maps — dabi / bitbucketweb
- ... — dabi / bitbucketweb
- unit testing Maps — dabi / bitbucketweb
- working on unittest Maps — dabi / bitbucketweb
- working on unit tests... — dabi / bitbucketweb
- working on unittests — dabi / bitbucketweb
- passes test_transportmaps — dabi / bitbucketweb
- fixed most of unittests... — dabi / bitbucketweb
- some other fixes — dabi / bitbucketweb
- working on distributions — dabi / bitbucketweb
- distributions done — dabi / bitbucketweb
- adding missing file — dabi / bitbucketweb
- working on Functionals — dabi / bitbucketweb
- testing Functionals — dabi / bitbucketweb
- updated distribution — dabi / bitbucketweb
- some fixed — dabi / bitbucketweb
- fixing unittests — dabi / bitbucketweb
- some fixes — dabi / bitbucketweb
- left two l2 minimization errors... — dabi / bitbucketweb
- passes all tests — dabi / bitbucketweb
#62 (Mar 4, 2019, 9:30:32 AM)
- started working on some examples — dabi / bitbucketweb
- working on euler bernoulli — dabi / bitbucketweb
- working on bod — dabi / bitbucketweb
- started with the a sketch of the algorithm — dabi / bitbucketweb
- working on algorithm — dabi / bitbucketweb
- lazy map implementation for BOD — dabi / bitbucketweb
- started algorithm for lazy map in Algorithms — dabi / bitbucketweb
- working on banana — dabi / bitbucketweb
- working on banana — dabi / bitbucketweb
- soft truncation, i.e. nearly linear map works better than hard truncation (which does not work at all but in few cases) — dabi / bitbucketweb
- playing with orders — dabi / bitbucketweb
- working on forward Euler map — dabi / bitbucketweb
- working on Forward Euler — dabi / bitbucketweb
- fixed Lorenz63 and added ODEs discretization maps to the framework — dabi / bitbucketweb
- started implementation of Lorenz 96 — dabi / bitbucketweb
- working on Lorenz96 — dabi / bitbucketweb
- added the possibility of skipping prediction steps by composing Euler maps — dabi / bitbucketweb
- added rmse output for smoothing — dabi / bitbucketweb
- lorenz 96 distribution ready — dabi / bitbucketweb
- starting to generate distribution for Lorenz96 — dabi / bitbucketweb
- dynamics generated correctly — dabi / bitbucketweb
- working on the generator of maps with prescribed sparsity for L96 — dabi / bitbucketweb
- working on the generator of maps with prescribed sparsity for L96 — dabi / bitbucketweb
- working on loading maps for L96 — dabi / bitbucketweb
- working on postprocessing — dabi / bitbucketweb
- working on results for AGU — dabi / bitbucketweb
- working on results for AGU — dabi / bitbucketweb
- added missing files l96 — dabi / bitbucketweb
- working on time plotting of l63 — dabi / bitbucketweb
- working on reduced basis extraction — dabi / bitbucketweb
- working on reduced basis extraction — dabi / bitbucketweb
- working on low-rank filter — dabi / bitbucketweb
- working on low-rank for filtering — dabi / bitbucketweb
- working on generation of maps for low-rank approximations — dabi / bitbucketweb
- working on generation of maps for low-rank approximations — dabi / bitbucketweb
- experimenting with low-rank — dabi / bitbucketweb
- working on low-rank l96 — dabi / bitbucketweb
- working on low-rank l96 — dabi / bitbucketweb
- working on L96 M2 — dabi / bitbucketweb
- working on L96 M2 — dabi / bitbucketweb
- working on L96 M2 — dabi / bitbucketweb
- working on gradient of L96 model II — dabi / bitbucketweb
- cython implementation of gradient works — dabi / bitbucketweb
- action of hessian works for L96 model 2 — dabi / bitbucketweb
- working on preconditioning — dabi / bitbucketweb
- working on l96 m2 — dabi / bitbucketweb
- working on l96 m2 — dabi / bitbucketweb
- running l96 m2 — dabi / bitbucketweb
- preparing linear maps for low-rank model — dabi / bitbucketweb
- re-factoring some nomenclature for hidden Markov chains — dabi / bitbucketweb
- re-factoring some nomenclature for hidden Markov chains — dabi / bitbucketweb
- modal l96 model 2 done — dabi / bitbucketweb
- fixed tmap-seq-tm — dabi / bitbucketweb
- working on filtering preconditioning — dabi / bitbucketweb
- preconditioning through filter almost works — dabi / bitbucketweb
- working on both l96 and l63 — dabi / bitbucketweb
- filter preconditioning works!! — dabi / bitbucketweb
- prepared filtering preconditioning for l96 — dabi / bitbucketweb
- preconditioning through filtering works for l96 — dabi / bitbucketweb
- mpi_map now updates automatically the counters of the methods called on an object — dabi / bitbucketweb
- l96 with filter preconditioning works. NEXT: remove 1st step of smoother (first lag-1 smoothing) and substitute with the regular step using the 0-th filtering (0-th step inference problem) — dabi / bitbucketweb
- removed skip-first and made 0th step to be included in the final map. So the first map in the composition does not involve a transition — dabi / bitbucketweb
- working on combination of filt preconditioner and low-rank preconditioner — dabi / bitbucketweb
- low-rank preconditioning works with filter preconditioning — dabi / bitbucketweb
- working on lr l96 — dabi / bitbucketweb
- working on l96 — dabi / bitbucketweb
- working on l96 lr — dabi / bitbucketweb
- going.. — dabi / bitbucketweb
- working on banded maps — dabi / bitbucketweb
- experimenting low-rank subspace ideas — dabi / bitbucketweb
- working on constructor — dabi / bitbucketweb
- working on runner for poisson — dabi / bitbucketweb
- embedding the deep lazy map construction into the builder cycle — dabi / bitbucketweb
- restructuring all the building architecture — dabi / bitbucketweb
- restructuring of building architecture done. todo on sequential algorithm as well. — dabi / bitbucketweb
- working on reshaping of builders — dabi / bitbucketweb
- some fixes after big merge. Going to branch off this in order to debug and work on Lazy maps at the same time — dabi / bitbucketweb
- working on the runner for lazy maps — dabi / bitbucketweb
- fixing here and there — dabi / bitbucketweb
- working on the lazy map script — dabi / bitbucketweb
- working on scripts for lazy maps — dabi / bitbucketweb
- working on scripts for lazy maps — dabi / bitbucketweb
- fixing new interface — dabi / bitbucketweb
- testing tmap-deep-lazy-tm — dabi / bitbucketweb
- testing tmap-deep-lazy-tm — dabi / bitbucketweb
- testing... — dabi / bitbucketweb
- script runs — dabi / bitbucketweb
- working on poisson with lazy maps — dabi / bitbucketweb
- working on poisson with lazy maps — dabi / bitbucketweb
#61 (Feb 20, 2019, 5:13:56 PM)
- transformed tmap-tm in the logic of CLI. to be tested by doing... — dabi / bitbucketweb
#60 (Feb 19, 2019, 7:57:56 PM)
- started on poisson — dabi / bitbucketweb
#59 (Feb 19, 2019, 4:06:48 PM)
- changed format of semilattices for linear span — dabi / bitbucketweb
- changed format of semilattices for linear span — dabi / bitbucketweb
- fixed callback parameter minimize kl. — dabi / bitbucketweb
- changed active_set to SortedSet to preserve iteration order after serialization (for parallel computing purposes) — dabi / bitbucketweb
- added LinearSpanVertex to the exposed classes — dabi / bitbucketweb
- fixed bug in LinearMap (defined twice...) — dabi / bitbucketweb
#58 (Feb 18, 2019, 10:03:00 PM)
- modified truncation step to retain always old indices — dabi / bitbucketweb
- left-over changes — dabi / bitbucketweb
- fixed low-rank approximation for outer grad (lis) to not compute multiple likelihoods — dabi / bitbucketweb
- fixed low-rank approximation for outer grad (lis) to not compute multiple likelihoods — dabi / bitbucketweb
- working on fv linear candidate map — dabi / bitbucketweb
- semilattices integrated into adaptivity. To be tested! The spirit is there though. — dabi / bitbucketweb
- semilattices integrated into adaptivity algorithm. fixes #92 — dabi / bitbucketweb
#57 (Feb 16, 2019, 8:22:03 AM)
- now LinearSpanApproximation uses a semilattice for multiindex and coefficients storage — dabi / bitbucketweb
- passing tests — dabi / bitbucketweb
- semilattice constructors exposed in default transport map constructors — dabi / bitbucketweb
- fixed init coeffs bug — dabi / bitbucketweb
- fixed semilattice data structure for serialization — dabi / bitbucketweb
- fixed bugs in tests — dabi / bitbucketweb
- reshaped tests — dabi / bitbucketweb
- passes all tests — dabi / bitbucketweb
#56 (Feb 4, 2019, 10:29:53 AM)
- working on the generation of the distribution — dabi / bitbucketweb
- setup for Lorenz63 done — dabi / bitbucketweb
- some fixes for sequential data assimilation — dabi / bitbucketweb
- working on linear map approximation — dabi / bitbucketweb
- figuring out what's wrong... — dabi / bitbucketweb
- added testing of gradients for distributions — dabi / bitbucketweb
- added tests for gradients of distributions and tried on Lorenz63 — dabi / bitbucketweb
- fixed unit tests for test_derivatives functions — dabi / bitbucketweb
#55 (Nov 17, 2018, 12:13:20 PM)
- started working on the Lorenz63 model — dabi / bitbucketweb
#54 (Nov 17, 2018, 11:47:21 AM)
- Finite difference is just one function for all the cases. — dabi / bitbucketweb
- all unit tests pass with new DerivativesChecks module — dabi / bitbucketweb
- remomved try catch from DerivativesChecks. Started with test_derivatives — dabi / bitbucketweb
- added action_hess_a interface to Parametric distributions — dabi / bitbucketweb
- added vectorized derivative check for the action of the Hessian — dabi / bitbucketweb
#53 (Oct 25, 2018, 10:20:20 PM)
- working on fixing init for examples — dabi / bitbucketweb
- removed examples from init imports in order to avoid cycles — dabi / bitbucketweb
#52 (Oct 24, 2018, 10:24:32 PM)
- added missing Deprecated.py file — dabi / bitbucketweb
#51 (Oct 24, 2018, 9:44:09 PM)
- updated installation docs requirements for libsuitesparse-dev — dabi / bitbucketweb
#49 (Sep 25, 2018, 9:58:13 PM)
- working on linear maps — dabi / bitbucketweb
- working on linear maps — dabi / bitbucketweb
- working on new implementation of NormalDistribution — dabi / bitbucketweb
- working on NormalDistribution — dabi / bitbucketweb
- going on with NormalDistribution — dabi / bitbucketweb
- debugging — dabi / bitbucketweb
- Laplace approximation work with new NormalDistribution implementation — dabi / bitbucketweb
- fixed bug on Normal to Uniform transformation — dabi / bitbucketweb
- working on sequential linear inference... — dabi / bitbucketweb
- fixed last unit test on sequential inference — dabi / bitbucketweb
#48 (Sep 23, 2018, 5:38:55 PM)
- get some initial code thoughts up.. — joshuawchen / bitbucketweb
- quadrature params stuff — joshuawchen / bitbucketweb
- personal add to gitignore — joshuawchen / bitbucketweb
- merge in branch — joshuawchen / bitbucketweb
- minor — joshuawchen / bitbucketweb
- done plots for BOD — dabi / bitbucketweb
- working on ice model — dabi / bitbucketweb
- minor testing — joshuawchen / bitbucketweb
- working on multi-dimensional ice model — dabi / bitbucketweb
- stopping crit based on first iteration. — joshuawchen / bitbucketweb
- pre_solve and post_solve methods — joshuawchen / bitbucketweb
- working on adaptivity for spatially varying ice model — dabi / bitbucketweb
- push for daniele — joshuawchen / bitbucketweb
- modified interface for refinement — dabi / bitbucketweb
- modified refinement for sparse grid — dabi / bitbucketweb
- initialized map to identity prior to minimize_kl_divergence first call — dabi / bitbucketweb
- move sparse grid adaptation (forming the sparse grid) into 'quadrature' — joshuawchen / bitbucketweb
- current tests on BananPlots — joshuawchen / bitbucketweb
- add comments for myself for tomorrow — joshuawchen / bitbucketweb
- working on ice settin — dabi / bitbucketweb
- 'GradientDimensionAdaptiveSparseGridKLMinimizationValidator' — joshuawchen / bitbucketweb
- working on ice model — dabi / bitbucketweb
- working on whitening of ice model — dabi / bitbucketweb
- working on ice — dabi / bitbucketweb
- better inverse map for ice problem — dabi / bitbucketweb
- minor — dabi / bitbucketweb
- sparse grid is not extracting f from kwargs, to be passed every time — dabi / bitbucketweb
- preparing for run — joshuawchen / bitbucketweb
- trying modification to variance diag calculation — joshuawchen / bitbucketweb
- try except in _refinement of KLAdaptivity — joshuawchen / bitbucketweb
- sign error. BOD — joshuawchen / bitbucketweb
- working on ice — dabi / bitbucketweb
- modified external interface for (x,w) for sparse grid library. — joshuawchen / bitbucketweb
- BananaPlots works perfectly. — joshuawchen / bitbucketweb
- BananaPlots MC vs SG. curently the MC doesnt work because in my branch — joshuawchen / bitbucketweb
- just some printing for diagnosing — joshuawchen / bitbucketweb
- consistent naming — joshuawchen / bitbucketweb
- bod plots for mcqmc — dabi / bitbucketweb
- add the points on the top of the plots for BOD sparse grid — joshuawchen / bitbucketweb
- kwargs — joshuawchen / bitbucketweb
- Is this a bug? — joshuawchen / bitbucketweb
- setting results on paper — dabi / bitbucketweb
- add arguments to pre/post solve — joshuawchen / bitbucketweb
- testing ideas... — joshuawchen / bitbucketweb
- add x,w, to dictionary after error estimation — joshuawchen / bitbucketweb
- validators — joshuawchen / bitbucketweb
- finished with tests for this branch. starting new branch for quadrature — joshuawchen / bitbucketweb
- pushing commented out code that shows the error of log(0) — joshuawchen / bitbucketweb
- changed tolerance for bod problem — dabi / bitbucketweb
- figuring out tolerances — dabi / bitbucketweb
- Remove class GradientDimensionAdaptiveSparseGridKLMinimizationValidator. — joshuawchen / bitbucketweb
- comments, and justfication for changes with comments for Daniele — joshuawchen / bitbucketweb
- remove some unnecesssary code. — joshuawchen / bitbucketweb
- remove more comments, etc — joshuawchen / bitbucketweb
- testing default_initial_quadrature. — joshuawchen / bitbucketweb
- Trying to case on whether or not 'initial' grid was laready created. — joshuawchen / bitbucketweb
- some order in the tolerances (maybe) — dabi / bitbucketweb
- sort weights by absolute value for more stability in order of addition. — joshuawchen / bitbucketweb
- Place plotting under a boolean for toggling ease. — joshuawchen / bitbucketweb
- commenting and refining quadrature... — joshuawchen / bitbucketweb
- clean up quadrature qtype 4 — joshuawchen / bitbucketweb
- remove 'np.newaxis' everywhere. use [x], now that I understand the — joshuawchen / bitbucketweb
- no need for 'previous_fval' under current algorithm.. — joshuawchen / bitbucketweb
- KeyError exception for default quadrature — joshuawchen / bitbucketweb
- KeyError for presolve. — joshuawchen / bitbucketweb
- coment an issue with this branch. why is pull_tar.n_coeffs missing if we — joshuawchen / bitbucketweb
- add ref_params to post_solve — joshuawchen / bitbucketweb
- add ref_params to post_solve, logger info — joshuawchen / bitbucketweb
- Fix BananaPlots for current interface — joshuawchen / bitbucketweb
- Oops, I accidentally merged branches incorrectly. Just rolling back some — joshuawchen / bitbucketweb
- add stochastic volatility to this branch. — joshuawchen / bitbucketweb
- trying much simpler interface to functions/integrands for sparse grid — joshuawchen / bitbucketweb
- bug fix — joshuawchen / bitbucketweb
- space — joshuawchen / bitbucketweb
- comments — joshuawchen / bitbucketweb
- add stochastic volatility to this branch — joshuawchen / bitbucketweb
- change tol for StochasticVolatility.. decrase max_grid_pts to alleviate — joshuawchen / bitbucketweb
- rethinking instantiation of parameters for GaussianDistribution — dabi / bitbucketweb
- reshaping the quadrature function in GaussianDistribution — dabi / bitbucketweb
- using bfgs in adaptivity for now to make sense of tolerances. working on — dabi / bitbucketweb
- we don't need 'converged', or 'termination reason' or the integral — joshuawchen / bitbucketweb
- BFGS for the BOD problem — joshuawchen / bitbucketweb
- now adaptive_quadratures can be built also wrt for pushforward/pullback — dabi / bitbucketweb
- relegate checking for uniqueness if x,w to some 'debug' mode in future — joshuawchen / bitbucketweb
- start testing laplace approximation. new BOD file for that. — joshuawchen / bitbucketweb
- added missing file — dabi / bitbucketweb
- mirroring what we've done in frozendistributions quadature, dont need to — joshuawchen / bitbucketweb
- adapter -> qparams['adapter'] — joshuawchen / bitbucketweb
- techincally dont need two files, just separate them though so we can — joshuawchen / bitbucketweb
- nax = np.newaxis — joshuawchen / bitbucketweb
- standard normal doesn't need trnasformation (dont need to use sampling — joshuawchen / bitbucketweb
- right now quadratur requires abs_tol, even if initial grid is just an — joshuawchen / bitbucketweb
- pre/post solve fixes try except - > if else — joshuawchen / bitbucketweb
- pre/post solve fixes — joshuawchen / bitbucketweb
- Decrease optimizaiton tol for the Laplace Approx problem, since its — joshuawchen / bitbucketweb
- testing parameters for initial_quadrature — joshuawchen / bitbucketweb
- I believe you need to warmstart here. — joshuawchen / bitbucketweb
- use error estimation points in post_solve — joshuawchen / bitbucketweb
- allow first variation/line serach to use the last set of points from — joshuawchen / bitbucketweb
- add L^2 regularization part of objective gradient. this right now is — joshuawchen / bitbucketweb
- add regularization to the laplace approx example — joshuawchen / bitbucketweb
- Revert "add L^2 regularization part of objective gradient. this right — joshuawchen / bitbucketweb
- slash \, and justification for qparams abs_tol — joshuawchen / bitbucketweb
- add norm printing — joshuawchen / bitbucketweb
- more informative comment. realized that the regularization is — joshuawchen / bitbucketweb
- stuff for l2 regularization — joshuawchen / bitbucketweb
- parameter adjustments: decrease regularizaztion, relax the initial — joshuawchen / bitbucketweb
- make the optimization a bit easier for this regularized problem. too — joshuawchen / bitbucketweb
- setting up Poisson — dabi / bitbucketweb
- almost done with the constant field Poisson setting — dabi / bitbucketweb
- fixing gradients — dabi / bitbucketweb
- Poisson problem set up for constant field and Gaussian field — dabi / bitbucketweb
- whitening script for Poisson — dabi / bitbucketweb
- added action of the Hessian — dabi / bitbucketweb
- fixed whitening script and added xml map descriptor — dabi / bitbucketweb
- fixed bug in FrozenDistributions qtype==0 — dabi / bitbucketweb
- change how w outputs in darkspark — joshuawchen / bitbucketweb
- increase max allowed levels... all quadarture levels were maxing out at — joshuawchen / bitbucketweb
- increase max allowed levels to a very high amount.. — joshuawchen / bitbucketweb
- fix a bug — joshuawchen / bitbucketweb
- working on sv — dabi / bitbucketweb
- working on new active variable detection technique — dabi / bitbucketweb
- turn try except into if/else. comment out new metho for prunning of — joshuawchen / bitbucketweb
- abs_tol is not needed for the default quad case. bring back 'self.eps', — joshuawchen / bitbucketweb
- if BFGS with inf norm, print inf norm of jacobina, not 2 norm. — joshuawchen / bitbucketweb
- eps in validator — joshuawchen / bitbucketweb
- working on SV. Try ½ solve tol to start with. ½ each time. set a minimum — joshuawchen / bitbucketweb
- prints — joshuawchen / bitbucketweb
- Informative printing of info, revert to 1/10 solve_tol, seems to work. — joshuawchen / bitbucketweb
- start MC SV — joshuawchen / bitbucketweb
- working on sv tests for talk — dabi / bitbucketweb
- figures generated for Josh talk — dabi / bitbucketweb
- update poisson example for newer versions of fenics — joshuawchen / bitbucketweb
- undo bug — joshuawchen / bitbucketweb
- start with diagonal — joshuawchen / bitbucketweb
- Fixed Poisson problem set up in SG adaptivity — dabi / bitbucketweb
- made DARKSparK and optional External package — dabi / bitbucketweb
- mpi works on the poisson example — dabi / bitbucketweb
- cleaning up poisson problem to be included to the available — dabi / bitbucketweb
- working on general setting of PDE problems with FENICS — dabi / bitbucketweb
- going on... — dabi / bitbucketweb
- going on.. — dabi / bitbucketweb
- going on.. — dabi / bitbucketweb
- almost done with the Poisson setting — dabi / bitbucketweb
- added LinearTriangularMap for fast regression (nested Cholesky) — dabi / bitbucketweb
- working on setting for Poisson problem — dabi / bitbucketweb
- working on Poisson — dabi / bitbucketweb
- added the bootstrap validator and changed arguments on error_estimation — dabi / bitbucketweb
- added bootstrap option to tmap-tm — dabi / bitbucketweb
- working on the bootstrap validator — dabi / bitbucketweb
- changed the stopping criterion for the bootstrap validator — dabi / bitbucketweb
- polishing adaptivity — dabi / bitbucketweb
- fixing coefficients update and cache usage in first variation — dabi / bitbucketweb
- added better estimation of points multiplier for bootstrap validator — dabi / bitbucketweb
- working on randomized approximation of Hessian for Laplace approximation — dabi / bitbucketweb
- randomized_direct_svd works — dabi / bitbucketweb
- randomized svd is consistent with eigenvalue decomposition — dabi / bitbucketweb
- low-rank laplace work with outer gradients and low-rank hessian — dabi / bitbucketweb
- implementing likelihood informed subspace procedure — dabi / bitbucketweb
- working on Laplace approximation with lis in the head of the square root — dabi / bitbucketweb
- added option lis on tmap-laplace. LinearTransportMaps and — dabi / bitbucketweb
#47 (Aug 23, 2018, 11:06:58 AM)
- throwing an error if ders!=[0,1] used in decoupled LinearSpan min_kl — dabi / bitbucketweb
- fixed last fix... — dabi / bitbucketweb
- generalized input arguments to ParametricDistriubtion, so that calls can — dabi / bitbucketweb
- generalized input arguments to ParametricDistriubtion, so that calls can — dabi / bitbucketweb
- fixing bugs in tutorial examples — dabi / bitbucketweb
- in the process of fixing documentation. Todo: sequential stochastic — dabi / bitbucketweb
- fixed direct construction tutorial — dabi / bitbucketweb
- checked inverse gumbel tutorial — dabi / bitbucketweb
- updated version — dabi / bitbucketweb
#46 (Jun 26, 2018, 5:09:33 AM)
- added bod and banana examples for sparse grid testing — dabi / bitbucketweb
#45 (Jun 26, 2018, 3:00:50 AM)
- modified interface of solve_to_target and generalized — dabi / bitbucketweb
- tested new interface for validators — dabi / bitbucketweb
#44 (Jun 25, 2018, 11:43:52 AM)
- working on figures for beta dist on monotone paper; — dabi / bitbucketweb
- working on figures for Beta plots — dabi / bitbucketweb
- working on banana example and adaptivity — dabi / bitbucketweb
- beta plots done — dabi / bitbucketweb
- working on banana adaptivity — dabi / bitbucketweb
- working on BOD example — dabi / bitbucketweb
- working on BOD — dabi / bitbucketweb
- working on IceThickness model — dabi / bitbucketweb
- working on the ice thickness problem — dabi / bitbucketweb
- working on ice — dabi / bitbucketweb
- working on bod and ice model with changes on adaptivity routines — dabi / bitbucketweb
- working on BOD and IceThickness models. Added Conditioning through maps. — dabi / bitbucketweb
- working on BOD — dabi / bitbucketweb
- working on BOD — dabi / bitbucketweb
- done figures of BOD. Maybe we should compare to MCMC — dabi / bitbucketweb
- working on bod plots — dabi / bitbucketweb
- fixed Markov Chain sampling (big bug) — dabi / bitbucketweb
#43 (May 2, 2018, 9:45:28 AM)
- removed unnecessary folders in Examples and updated mirroring script — dabi / bitbucketweb
- added algorithms documentation section — dabi / bitbucketweb
- updated script for public mirroring — dabi / bitbucketweb
#42 (Apr 30, 2018, 3:02:23 PM)
- example on Gumbel 1d — rsb / bitbucketweb
- subtract identity_coeffs + l1_reg to component kl — rsb / bitbucketweb
- fixed compatibility issue with py2 — dabi / bitbucketweb
#41 (Apr 30, 2018, 1:46:37 PM)
- removed dependency on FileNotFoundError for compatibility with py2 — dabi / bitbucketweb
#40 (Apr 30, 2018, 12:16:59 PM)
- fixing bugs for release — dabi / bitbucketweb
- working to fix grax_gradt_kl — dabi / bitbucketweb
- fixed grad_x of first variation — dabi / bitbucketweb
#39 (Apr 16, 2018, 9:44:10 AM)
- fixed processtime name — dabi / bitbucketweb
#37 (Apr 16, 2018, 9:40:49 AM)
- fixed process_time PyV3 PyV2 — dabi / bitbucketweb