Started 5 yr 5 mo ago
Took 1 hr 8 min on reynolds

Build #5 (Apr 30, 2017, 7:24:03 PM)

Changes
  1. New stoc vol file (details / bitbucketweb)
  2. Done with implementation stochastic volatility with no hyper-parameters (details / bitbucketweb)
  3. Stochastic volatility (details / bitbucketweb)
  4. answers to Alessio comments (details / bitbucketweb)
  5. started with solver (details / bitbucketweb)
  6. stoc vol works. TODO: implement diagnostics (details / bitbucketweb)
  7. started with total order implementation (details / bitbucketweb)
  8. working on MixedOrder class. (details / bitbucketweb)
  9. working on mixed order (details / bitbucketweb)
  10. working on MixedOrder (details / bitbucketweb)
  11. Added diagnostic routines (details / bitbucketweb)
  12. merged into toolbox (details / bitbucketweb)
  13. working on stocVol example (details / bitbucketweb)
  14. stocVol (details / bitbucketweb)
  15. stocVol (details / bitbucketweb)
  16. added matplotlib dependency (details / bitbucketweb)
  17. working on banana example (details / bitbucketweb)
  18. documenting banana (details / bitbucketweb)
  19. working on banana (details / bitbucketweb)
  20. working on banana example (details / bitbucketweb)
  21. banana example needs documentation regarding diagnostics (details / bitbucketweb)
  22. added some diagnostics (details / bitbucketweb)
  23. working on laplace_approximation function (details / bitbucketweb)
  24. laplace (details / bitbucketweb)
  25. working on optimizer (details / bitbucketweb)
  26. Laplace approx done. To be tested. (details / bitbucketweb)
  27. working on FrozenGaussian with precision input (details / bitbucketweb)
  28. tests passed for new version of GaussianDensity. TODO: add unittests (details / bitbucketweb)
  29. done precision tests (details / bitbucketweb)
  30. laplace works. to finish tests (details / bitbucketweb)
  31. laplace works. to finish tests (details / bitbucketweb)
  32. laplace works. to finish tests (details / bitbucketweb)
  33. Laplace ready (details / bitbucketweb)
  34. test optimizer (details / bitbucketweb)
  35. working on optimizer (details / bitbucketweb)
  36. fixed optimizer (details / bitbucketweb)
  37. optimizer works! (details / bitbucketweb)
  38. added some docs on banana (details / bitbucketweb)
  39. added some logging in the Diagnostic module. To be added all over. (details / bitbucketweb)
  40. newton_cglu_optimizer (details / bitbucketweb)
  41. added function niceplot (details / bitbucketweb)
  42. Added class TransportMap (details / bitbucketweb)
  43. class TransportMap integrated (details / bitbucketweb)
  44. Init maps (details / bitbucketweb)
  45. working on the CommonBase LinearSpan TM (details / bitbucketweb)
  46. Removed duplicate pullback functions (details / bitbucketweb)
  47. working on CommonBase LinearSpan Map (details / bitbucketweb)
  48. linear transport map (details / bitbucketweb)
  49. fixed naming of TransportMaps (details / bitbucketweb)
  50. working on CommonBase LinearSpan Map (details / bitbucketweb)
  51. working on CommonBase LinearSpan Map (details / bitbucketweb)
  52. Done CommonBasis LinearSpan Map. Moving to (details / bitbucketweb)
  53. working on CommonBasisLinearSpanApproximation (details / bitbucketweb)
  54. working on CommonBasisLinearSpanApproximation (details / bitbucketweb)
  55. working on CommBase Map (details / bitbucketweb)
  56. moving function evaluation and gradients into LineaSpanAppoximation (details / bitbucketweb)
  57. Done with linear map class. Now moving to unit test (details / bitbucketweb)
  58. in process of migrating functions from FullLinearSpan to LinearSpan with (details / bitbucketweb)
  59. moved most of the stuff to LinearSpan (details / bitbucketweb)
  60. moved most of the stuff to LinearSpan (details / bitbucketweb)
  61. LinearSpanApproximations ready. Move to TriangularTransportMap (details / bitbucketweb)
  62. Minor changes (details / bitbucketweb)
  63. changed uml (details / bitbucketweb)
  64. Added plotAlignedSliceMap (details / bitbucketweb)
  65. Added niceContour, plot2density and testBananaPullback (details / bitbucketweb)
  66. added testBananaPullback (details / bitbucketweb)
  67. fixed l2 regularization (details / bitbucketweb)
  68. rotated banana improved (details / bitbucketweb)
  69. working on #36. Done with Transport maps? (details / bitbucketweb)
  70. Banana example linear span (details / bitbucketweb)
  71. some mods on the examples (details / bitbucketweb)
  72. #26 working on TM densities test cases (details / bitbucketweb)
  73. working on test cases (details / bitbucketweb)
  74. working on test cases (details / bitbucketweb)
  75. working on density test cases (details / bitbucketweb)
  76. working on test cases for densities (details / bitbucketweb)
  77. working on dens test cases (details / bitbucketweb)
  78. working on tests densities (details / bitbucketweb)
  79. transport map densities tests added. Still some problems on the linear (details / bitbucketweb)
  80. added tests for kl_divergence (details / bitbucketweb)
  81. removed old tests structure (details / bitbucketweb)
  82. #26 fixed all unittests. TODO add test for LinearTransportMap (Alessio) (details / bitbucketweb)
  83. updating UML graph and TransportMap classes (details / bitbucketweb)
  84. Fixes #27: UML graph updated (details / bitbucketweb)
  85. fixed import name for CommonBasisLinearSpanTriangularTransportMap (details / bitbucketweb)
  86. relaxed target eps in MC tests for density unittests (details / bitbucketweb)
  87. Jenkins test develop script added (details / bitbucketweb)
  88. fixed test_develop chmod (details / bitbucketweb)
  89. #25 restructuring precomp strategy in order to enrich the precomp (details / bitbucketweb)
  90. #25 restructuring precomp strategy in order to enrich the precomp (details / bitbucketweb)
  91. #25 restructuring precomp strategy in order to enrich the precomp (details / bitbucketweb)
  92. uni-variate preallocation works for linear system (details / bitbucketweb)
  93. working on TransportMapBase to allow both uni-variate and multi-variate (details / bitbucketweb)
  94. working on TransportMapBase to allow both uni-variate and multi-variate (details / bitbucketweb)
  95. #25 linear span transport maps with precomputation of uni-variate and (details / bitbucketweb)
  96. working on IntegratedExp approximation (details / bitbucketweb)
  97. working on IntegratedExp approximation (details / bitbucketweb)
  98. working on IntegratedExp approximation (details / bitbucketweb)
  99. working on precomputation in integrated exponential. Some tests fail... (details / bitbucketweb)
  100. #25 preomputation on integrated exponential works! Make comprehensive (details / bitbucketweb)
  101. fixed FrozenFunction precomp functions (details / bitbucketweb)
  102. KLdivergence example with options (details / bitbucketweb)
  103. working on common basis (details / bitbucketweb)
  104. working on common basis (details / bitbucketweb)
  105. fixing common basis (details / bitbucketweb)
  106. CommonBasisLinearSpan ready. TODO: unittests (details / bitbucketweb)
  107. making unittests for CommonBasisLinearSpan (details / bitbucketweb)
  108. fixed stoc Vol with constant term (details / bitbucketweb)
  109. CommonBasis LinearSpan works. Moving to IntegratedExponential (details / bitbucketweb)
  110. CommonBasisIntExp started. precomp_evaluate done (details / bitbucketweb)
  111. IntExpFunctionApproximation precomputation structure refactorization (details / bitbucketweb)
  112. refactored IntExpFuncApproximation (details / bitbucketweb)
  113. working on CommonBasis IntegExp (details / bitbucketweb)
  114. CommonBasis IntegratedExponential works (details / bitbucketweb)
  115. KLdivergence example now uses CommonBasis implementation (details / bitbucketweb)
  116. Fixes #25. (details / bitbucketweb)
  117. updated banana example with common basis (details / bitbucketweb)
  118. TotalOrder approximation added. Fix the integration into IntExp (details / bitbucketweb)
  119. Total order working on test_transportmaps. TODO: Add (details / bitbucketweb)
  120. Total Order unittests done (details / bitbucketweb)
  121. fixed CommonBasis precomputation, adding to_compute_flag (details / bitbucketweb)
  122. Fixes #1. Total order truncation implemented. Updated KLdivergence (details / bitbucketweb)
  123. Added BOD model and ConditionedDiffusion folders (details / bitbucketweb)
  124. fixed conflict on testBananaPullback (details / bitbucketweb)
  125. started with new branch (details / bitbucketweb)
  126. fixed bug on GaussianDensity rvs (details / bitbucketweb)
  127. fixed bug on GaussianDensity rvs (details / bitbucketweb)
  128. working on stochastic volatility example (details / bitbucketweb)
  129. Added joint BOD model (details / bitbucketweb)
  130. reshaping StochasticVolatility example (details / bitbucketweb)
  131. BOD model works. (details / bitbucketweb)
  132. Stochastic volatility issuing command changed (details / bitbucketweb)
  133. #31 started optional vectorization of expectations in (details / bitbucketweb)
  134. Notes composition map Stoc Vol (details / bitbucketweb)
  135. Added banana folder (details / bitbucketweb)
  136. starting with stoc vol composition (details / bitbucketweb)
  137. split map generation from StochasticVolatility files (details / bitbucketweb)
  138. Added gradients composition (details / bitbucketweb)
  139. Added gradients composition (details / bitbucketweb)
  140. Added Markov Component Stoc Vol (details / bitbucketweb)
  141. stoc vol composition almost there.... (details / bitbucketweb)
  142. stoc vol composition runs. TODO: compose all the maps (details / bitbucketweb)
  143. working on lifting and overall pullback (details / bitbucketweb)
  144. stochastic volatility composition works!!! (details / bitbucketweb)
  145. refactoring the vectorization in several routines... to be finished. (details / bitbucketweb)
  146. #31 refactoring to allow computations in batches (details / bitbucketweb)
  147. refactored everything to execute in batches defined by a list (iterable) (details / bitbucketweb)
  148. new implementation works on old unit tests (details / bitbucketweb)
  149. current implementation works on unittests and KLdivergence example test (details / bitbucketweb)
  150. setting up BOD model for higher dimension... (details / bitbucketweb)
  151. Opens #20. Added logging capabilities in the minimize_kl_divergence (details / bitbucketweb)
  152. working on BOD higher order (details / bitbucketweb)
  153. working on bod (details / bitbucketweb)
  154. working on KL divergence arctan function (details / bitbucketweb)
  155. cleaned KL divergence file (details / bitbucketweb)
  156. re-organized predefined densities (details / bitbucketweb)
  157. added corresponding changes also in the LinearTransportMap class (details / bitbucketweb)
  158. working on the tilted banana (details / bitbucketweb)
  159. updating LinearTransportMap (details / bitbucketweb)
  160. updating LinearTransportMap (details / bitbucketweb)
  161. working on banana (details / bitbucketweb)
  162. added default classes for Isotropic transport maps (details / bitbucketweb)
  163. added default classes for Isotropic transport maps (details / bitbucketweb)
  164. using default functions all over (details / bitbucketweb)
  165. working on rotated banana (details / bitbucketweb)
  166. #35 working on cached evaluations low-level (details / bitbucketweb)
  167. #35 low-level caching for function evaluation implemented. TODO: check (details / bitbucketweb)
  168. removed some all-equal statements (details / bitbucketweb)
  169. changed handling of indices (details / bitbucketweb)
  170. caching low level partial_xd done (details / bitbucketweb)
  171. changed array_equal withing function evaluation with a same_coeffs_flag (details / bitbucketweb)
  172. fixed FrozenTriangularTransportMaps (details / bitbucketweb)
  173. Gradients conditional diffusion (details / bitbucketweb)
  174. working on conditioned diffusion script. fixed inputs to StocVol (details / bitbucketweb)
  175. conditioned diffusion running script ready (details / bitbucketweb)
  176. using default TransportMap generation all over the place (details / bitbucketweb)
  177. Implemented gradients Markov Component Cond Diff (details / bitbucketweb)
  178. working on fixing stochastic volatility components. TODO: Fix the (details / bitbucketweb)
  179. fixed full transport map with extra same_coeffs_flag (details / bitbucketweb)
  180. Debugging Hessian CondDiff (details / bitbucketweb)
  181. Fixed gradient Markov Component Conditioned Diffusion (details / bitbucketweb)
  182. Added composition maps for conditione diffusion (details / bitbucketweb)
  183. working on conditioned diffusion (details / bitbucketweb)
  184. FullTransportMap does not need to redefine pullback and pushforward (details / bitbucketweb)
  185. cond diffusion works. better parametrization is needed (RBF?) (details / bitbucketweb)
  186. can recover precision matrix in 3d (details / bitbucketweb)
  187. updating UML diagram (details / bitbucketweb)
  188. map from samples now has a couple more distributions to sample from (details / bitbucketweb)
  189. mapFromSamples also plots histograms of pullback against original (details / bitbucketweb)
  190. removed "TranportMaps." tag from index (details / bitbucketweb)
  191. compare map to analytical (details / bitbucketweb)
  192. histogram plots a bit nicer (details / bitbucketweb)
  193. working on using RBF in banana example (details / bitbucketweb)
  194. preparing for high-level caching. Restructured precomp structure (details / bitbucketweb)
  195. high-level caching is done. TODO: check it is doing what is required to (details / bitbucketweb)
  196. the high-level caching and the computation in batches/parallel need to (details / bitbucketweb)
  197. mfs looking good, need support map still (details / bitbucketweb)
  198. updated interface min_kl_div in TransportMapBase (details / bitbucketweb)
  199. removed low-level caching. added high-level caching. TODO: check that (details / bitbucketweb)
  200. added test case for high-level caching. change idxs_list to idxs_slice (details / bitbucketweb)
  201. test cases work. try it out on examples and then test performaces on BOD (details / bitbucketweb)
  202. works on examples kldivergence. Check that caching is actually used (details / bitbucketweb)
  203. #35 high-level caching successful. TODO: profile on the BOD example. (details / bitbucketweb)
  204. turned pushforward to exp(log_pushforward) (details / bitbucketweb)
  205. experimenting on the banana example (details / bitbucketweb)
  206. fixed bug in TransportMapBase (details / bitbucketweb)
  207. removed flag vectorize. batch_size determines whether vectorize or not (details / bitbucketweb)
  208. updated examples without vectorize flags (details / bitbucketweb)
  209. fixed kl_divergence routines with batches. list -> slice (details / bitbucketweb)
  210. working on low-level caching (details / bitbucketweb)
  211. working on low-level caching (details / bitbucketweb)
  212. low-level caching works on test cases (details / bitbucketweb)
  213. trying to improve the hess computation (details / bitbucketweb)
  214. alternative solution (details / bitbucketweb)
  215. added grad_a_squared with precomputed VVT (details / bitbucketweb)
  216. removed same_coeffs_flag and added caching for partial_xd (details / bitbucketweb)
  217. working on the banana (details / bitbucketweb)
  218. reverted to grad_a instead of grad_a_squared (details / bitbucketweb)
  219. polishing hess_a in IntegExp (details / bitbucketweb)
  220. polishing hess_a (details / bitbucketweb)
  221. polishing hessian little by little (details / bitbucketweb)
  222. mfsSandia includes transform (details / bitbucketweb)
  223. some improvements in hess_a_log_pullback (details / bitbucketweb)
  224. working on banana (details / bitbucketweb)
  225. fixed import to numpy.linalg (details / bitbucketweb)
  226. fixed hessian with regularization (details / bitbucketweb)
  227. adding missing files to conditioned diffusion (details / bitbucketweb)
  228. working on stoch diff (details / bitbucketweb)
  229. working on conditioned diffusion (details / bitbucketweb)
  230. improving visualization in conditioned diffusion (details / bitbucketweb)
  231. plot in place conditioned diffusion (details / bitbucketweb)
  232. working on value at risk problem (details / bitbucketweb)
  233. working on the banana (details / bitbucketweb)
  234. working on banana (details / bitbucketweb)
  235. adding missing files to conditioned diffusion (details / bitbucketweb)
  236. working on stoch diff (details / bitbucketweb)
  237. working on conditioned diffusion (details / bitbucketweb)
  238. improving visualization in conditioned diffusion (details / bitbucketweb)
  239. plot in place conditioned diffusion (details / bitbucketweb)
  240. working on value at risk problem (details / bitbucketweb)
  241. remove rare events (details / bitbucketweb)
  242. starting the sparsity algorithm (details / bitbucketweb)
  243. sandia samples: now asks whether right or left-tailed (details / bitbucketweb)
  244. plot samples includes 1d analytic form (details / bitbucketweb)
  245. sandia1d computes analytical pdf and kl between that and computed (details / bitbucketweb)
  246. kl div in 1d needs approximation help (details / bitbucketweb)
  247. pullback density in progress (details / bitbucketweb)
  248. fixed pullback (details / bitbucketweb)
  249. trying MSE ? instead of KL (details / bitbucketweb)
  250. mse computation in development (details / bitbucketweb)
  251. Open #8 (details / bitbucketweb)
  252. added derivative checks tests for pushforward transport map densities. (details / bitbucketweb)
  253. building up example for inverse construction (details / bitbucketweb)
  254. set up kl using TM density (details / bitbucketweb)
  255. examples work derivative free (details / bitbucketweb)
  256. creating inverse gradients (details / bitbucketweb)
  257. working on gradient (details / bitbucketweb)
  258. checking gradient (details / bitbucketweb)
  259. back to kl (details / bitbucketweb)
  260. gradient inverse map works (details / bitbucketweb)
  261. implemented gradient. to be checked with tests and stochastic volatility (details / bitbucketweb)
  262. grad_a_log_pushforward passes the unit test. Check signs and fix (details / bitbucketweb)
  263. grad_a_log_pushforward passes the unit test. Check signs and fix (details / bitbucketweb)
  264. unit tests passed. Remove precomputation in minimization in order to (details / bitbucketweb)
  265. inverse solution works. todo: profile to see whether some computations (details / bitbucketweb)
  266. partition densities off (details / bitbucketweb)
  267. working on banana example (details / bitbucketweb)
  268. added no-plot option (details / bitbucketweb)
  269. Open #19: written test functions for map from samples. The problem has (details / bitbucketweb)
  270. maps from samples tests work fine (details / bitbucketweb)
  271. working on composite and inverse transport maps, in order to do (details / bitbucketweb)
  272. working on the missing composition functions (details / bitbucketweb)
  273. adding missing functions (details / bitbucketweb)
  274. added grad_x and hess_x functions to Composite maps. (details / bitbucketweb)
  275. working on the banana example. transform the target to the pushforward (details / bitbucketweb)
  276. adding necessary inverse functions for pushforward (details / bitbucketweb)
  277. fixing banana with composition of maps (details / bitbucketweb)
  278. updated UML diagram (details / bitbucketweb)
  279. banana example works with composite densities (details / bitbucketweb)
  280. mfs tests has laplace, needs reorg (details / bitbucketweb)
  281. test cases using randomly generated coefficients work (details / bitbucketweb)
  282. started with direct construction of the inverse sv transport. Added (details / bitbucketweb)
  283. added default also for linear span approximations (details / bitbucketweb)
  284. working on sv inverse transport (details / bitbucketweb)
  285. woring on stoc vol (details / bitbucketweb)
  286. working on cond diffustion (details / bitbucketweb)
  287. small changes in defaluts (details / bitbucketweb)
  288. Default option poly and rbf (details / bitbucketweb)
  289. added rbf/poly option to cond diffusion (details / bitbucketweb)
  290. working on storage and reload of computed maps (details / bitbucketweb)
  291. construction and postprocessing scripts for conditioned diffusion are (details / bitbucketweb)
  292. fixed random conditionals plotting problem (details / bitbucketweb)
  293. storage (using dill) and post processing of conditioned diffusion (details / bitbucketweb)
  294. test numbers 1-4 in extra densities (details / bitbucketweb)
  295. working on plotting of conditioned diffusion (details / bitbucketweb)
  296. fixed bug in plotAlignedConditionals (details / bitbucketweb)
  297. plotting (details / bitbucketweb)
  298. forcing full span when rbf is chosen in default constructors (details / bitbucketweb)
  299. condiff: fixed input span to (details / bitbucketweb)
  300. testing higher order for cond diff (details / bitbucketweb)
  301. fixed problem in aligned map plotting (details / bitbucketweb)
  302. started with parallelization of diagnostics (details / bitbucketweb)
  303. parallelization of the diagnostics (details / bitbucketweb)
  304. cond diff: adaptation (details / bitbucketweb)
  305. cond diff: adaptation works (details / bitbucketweb)
  306. parallelization works for aligned conditionals (details / bitbucketweb)
  307. working on cond diff example and figures (details / bitbucketweb)
  308. plot with log log (details / bitbucketweb)
  309. plotting diagnostic parallelized with mpi_map v1.0.3 (details / bitbucketweb)
  310. updated conditioned diffusion postprocessing files (details / bitbucketweb)
  311. added variance based diagnostic (details / bitbucketweb)
  312. allow for restart in cond diff example (details / bitbucketweb)
  313. working on restarting of cond diff (details / bitbucketweb)
  314. plotting diagnostic now stack all the evaluation points together in (details / bitbucketweb)
  315. added nprocs in adapted composition cond diff (details / bitbucketweb)
  316. fixed bug in slice map plotting (details / bitbucketweb)
  317. cond diff with restart works (details / bitbucketweb)
  318. fixed problem in inverse which would cause loss of precision. cond diff (details / bitbucketweb)
  319. started with the parallelization of variance_approx_kl. Changes are (details / bitbucketweb)
  320. added Weibull density to the available test distributions (details / bitbucketweb)
  321. moved all pc_density analytical stuff to ExtraDensities (details / bitbucketweb)
  322. started with issue #41. made a sketch c++ module (details / bitbucketweb)
  323. handling arrays Numpy/C done (details / bitbucketweb)
  324. started with weird sampler (details / bitbucketweb)
  325. sampler done (details / bitbucketweb)
  326. working on construction from samples (details / bitbucketweb)
  327. working on Laplace for cond diff (details / bitbucketweb)
  328. working on plots cond diff (details / bitbucketweb)
  329. some plotting progresses (details / bitbucketweb)
  330. example for xun ready. Todo: document it.. (details / bitbucketweb)
  331. added readme to the CPP-module example (details / bitbucketweb)
  332. removed unnecessary files (details / bitbucketweb)
  333. prepared figures for YMM presentation (details / bitbucketweb)
  334. working on the direct approximation of the Weibull distribution (details / bitbucketweb)
  335. log_pdf in extra doesn't work with algorithm, but algorithm is running (details / bitbucketweb)
  336. working on map composition direct transport (details / bitbucketweb)
  337. Weibull works. Added asymptotic behavior on the Logistic. (details / bitbucketweb)
  338. starting with stochastic volatility (details / bitbucketweb)
  339. working on step by step construction (details / bitbucketweb)
  340. reordering in progress (details / bitbucketweb)
  341. renamed files (details / bitbucketweb)
  342. moving in the dark for Logistic and Banana examples... (details / bitbucketweb)
  343. added installation tips in the documentation (details / bitbucketweb)
  344. reorganizing example file organization (details / bitbucketweb)
  345. fixed bug due to new version of SciPy rootfinding routine. tolerances (details / bitbucketweb)
  346. rewriting the density (details / bitbucketweb)
  347. sv density and data generation ready (details / bitbucketweb)
  348. sv: Laplace done (details / bitbucketweb)
  349. sv: composition of maps done, with postprocess (details / bitbucketweb)
  350. sv: direct map done (details / bitbucketweb)
  351. direct map in low dimension (details / bitbucketweb)
  352. sv: inverse map construction (details / bitbucketweb)
  353. algorithm working, with unnormalized data (details / bitbucketweb)
  354. normalizing data, in progress (details / bitbucketweb)
  355. sv working on the inverse map (details / bitbucketweb)
  356. algorithm with renormalized data (details / bitbucketweb)
  357. working on sv inverse (details / bitbucketweb)
  358. added grad check on minimiziation. working on sv inverse... (details / bitbucketweb)
  359. fixed bug on grad_a_inverse pushforward... (details / bitbucketweb)
  360. sv inverse map preconditioned throught laplace pullback (details / bitbucketweb)
  361. preparing dataset for Shwab (details / bitbucketweb)
  362. algorithm tau change (details / bitbucketweb)
  363. updated jenkins links (details / bitbucketweb)
  364. reversed to v1.0.0 for initial releases (details / bitbucketweb)
  365. data loading script for Robert done (details / bitbucketweb)
  366. data loading for Robert works (details / bitbucketweb)
  367. Added example with only the material for Shwab (details / bitbucketweb)
  368. added test pullback for shwab material (details / bitbucketweb)
  369. mc study of map parameters (details / bitbucketweb)
  370. memory leak issue (details / bitbucketweb)
  371. renamed variables (details / bitbucketweb)
  372. sv: inverse map preconditioned with diagonal Laplace (details / bitbucketweb)
  373. debugging memory leak (details / bitbucketweb)
  374. added if conditions around logging outputs (details / bitbucketweb)
  375. partially solved memory leak. There is still an issue with precomputed (details / bitbucketweb)
  376. improved logging (details / bitbucketweb)
  377. New stoc vol with hyperparameters doc (details / bitbucketweb)
  378. fixing memory leak (details / bitbucketweb)
  379. Done with the derivation of the  Stoc Vol model  with Hyper-params (details / bitbucketweb)
  380. cleaned msf_kl_test file (details / bitbucketweb)
  381. mc_sparsity.py (details / bitbucketweb)
  382. post processing mc study (details / bitbucketweb)
  383. diagnostics are now parallelized (details / bitbucketweb)
  384. #45 added default constructors to examples. TODO: fix Gumbel (details / bitbucketweb)
  385. Fixes #45 (details / bitbucketweb)
  386. finished with default constructors examples (details / bitbucketweb)
  387. post proc for mc study has S and Omega matrix and element-wise norms (details / bitbucketweb)
  388. Implementing gradients Stoc Vol with Hyper-parameters (details / bitbucketweb)
  389. caching passes unit tests. TODO: test on example and check speedup (details / bitbucketweb)
  390. added time tracking for examples (details / bitbucketweb)
  391. working on examples (details / bitbucketweb)
  392. added timing in all the examples (details / bitbucketweb)
  393. taking top-down approach. started with kl_divergence functions in (details / bitbucketweb)
  394. variable elimination added but has bug, need to find cliques in matrix (details / bitbucketweb)
  395. applied changes to all functions in Routines.py. TODO: think about the (details / bitbucketweb)
  396. grid graph implemented (details / bitbucketweb)
  397. designed a way to make chacing and batching work while parallelizing the (details / bitbucketweb)
  398. working on parallel structures (details / bitbucketweb)
  399. parallelization of kl_divergence done... maybe. (details / bitbucketweb)
  400. working on parallel batching... (details / bitbucketweb)
  401. working on parallel-batching... (details / bitbucketweb)
  402. MPI implementation to be debugged (old and new unit tests) (details / bitbucketweb)
  403. old unit tests work!! (details / bitbucketweb)
  404. parallel evaluation of kl divergence work almost on all test cases.. (details / bitbucketweb)
  405. parallelization now allows for the use of a pool of processors which are (details / bitbucketweb)
  406. added unit tests for minimization. to be tested (details / bitbucketweb)
  407. kl tests (details / bitbucketweb)
  408. working on unit tests (details / bitbucketweb)
  409. fixed test case for arctan parallel (details / bitbucketweb)
  410. minimization tests passed (details / bitbucketweb)
  411. Done with full joint  Stoc Vol with Hypers (details / bitbucketweb)
  412. bug fixed. running all tests! (details / bitbucketweb)
  413. fixed bugs! MPI works! TODO: update the examples (details / bitbucketweb)
  414. Done with Markov Component of Stoc Vol with Hypers (details / bitbucketweb)
  415. parallelization works on the examples. TODO: profiling (details / bitbucketweb)
  416. fixed bug on unit tests (details / bitbucketweb)
  417. speed up unit tests kl divergence (details / bitbucketweb)
  418. parallelized precomputation and fixed bug in test_kl_divergence (details / bitbucketweb)
  419. another bug in test_kl (details / bitbucketweb)
  420. another bug in test_kl (details / bitbucketweb)
  421. running tests on stochastic volatility with hyperparameters (details / bitbucketweb)
  422. working on parallelization of generation of new samples (details / bitbucketweb)
  423. parallelized generation of samples (details / bitbucketweb)
  424. post-proc finds error, variance and bias (details / bitbucketweb)
  425. fixed mpi_eval call in regression (details / bitbucketweb)
  426. fixed bug regression (details / bitbucketweb)
  427. removed parallelization in regression for now... opening #52 (details / bitbucketweb)
  428. working on composition of maps (details / bitbucketweb)
  429. working on stoch vol (details / bitbucketweb)
  430. examples work without mpirun (details / bitbucketweb)
  431. Fixes #53. (details / bitbucketweb)
  432. optional matplotlib in examples (details / bitbucketweb)
  433. updated testing script (details / bitbucketweb)
  434. made matplotlib optional throughout the module (details / bitbucketweb)
  435. added script for running on voyager.mit.edu (details / bitbucketweb)
  436. working on stochvol (details / bitbucketweb)
  437. working on cluster (details / bitbucketweb)
  438. fixed bug in kl divergence unit tests (details / bitbucketweb)
  439. working on cluster (details / bitbucketweb)
  440. Added trim density on Stoc Vol Hyper (details / bitbucketweb)
  441. map generation for density with hyper parameters (details / bitbucketweb)
  442. working on postprocessing (details / bitbucketweb)
  443. Fixed deepcopy issues with Stoc Vol (details / bitbucketweb)
  444. working on cluster (details / bitbucketweb)
  445. postprocessing step (details / bitbucketweb)
  446. fix typo in Routines.py (details / bitbucketweb)
  447. fixed map generation with hyper (details / bitbucketweb)
  448. all tests pass (details / bitbucketweb)
  449. changes made on hess_x_log_pullback. TODO: replicate on other hess_x (details / bitbucketweb)
  450. Issue #31: removed construction of m x d x d x d x d tensor from (details / bitbucketweb)
  451. working on #40: implementing the map-reduce scheme (details / bitbucketweb)
  452. the map-reduce scheme works. Figure out why the number of processes (details / bitbucketweb)
  453. Fixes #53: implements map-reduce scheme (details / bitbucketweb)
  454. histograms of map and omega entries (details / bitbucketweb)
  455. added the stochastic Laplace postprocessing for the hyperparamters case (details / bitbucketweb)
  456. laplace approximation posprocess for hyper parameters (details / bitbucketweb)
  457. Implemented Markov component stoc vol hyper (details / bitbucketweb)
  458. added defaults for components with different basis and span (details / bitbucketweb)
  459. ready to test (details / bitbucketweb)
  460. fix bug on defaults (details / bitbucketweb)
  461. almost testing (details / bitbucketweb)
  462. fixes.. (details / bitbucketweb)
  463. something is running (details / bitbucketweb)
  464. Scripts composition stoc vol with hyper working (details / bitbucketweb)
  465. fixed defaults (details / bitbucketweb)
  466. working on unit tests for clusters (details / bitbucketweb)
  467. Ready for full problem with 1hyper (details / bitbucketweb)
  468. Ready for full problem with 1hyper (details / bitbucketweb)
  469. unit tests on cluster work (details / bitbucketweb)
  470. Fixes for full problem with 1hyper (details / bitbucketweb)
  471. Stoc Vol Hyper--configuration for 2 hyper (details / bitbucketweb)
  472. Stoc Vol Hyper--configuration for 2 hyper (details / bitbucketweb)
  473. working on first variation examples (details / bitbucketweb)
  474. working on example (details / bitbucketweb)
  475. working on first variation (details / bitbucketweb)
  476. fixed bug on defaults (details / bitbucketweb)
  477. other bug.. (details / bitbucketweb)
  478. added job number in submission script for clusters (details / bitbucketweb)
  479. added voyager submission script (details / bitbucketweb)
  480. Setup for 3hypers Stoc Vol (details / bitbucketweb)
  481. Setup for 3hypers Stoc Vol (details / bitbucketweb)
  482. very unsure on where to put the first variation implementation (details / bitbucketweb)
  483. regression example works on python3 (details / bitbucketweb)
  484. working on parallelization of regression (details / bitbucketweb)
  485. regression is now parallel. TODO: implement map-reduce for regression (details / bitbucketweb)
  486. warm start with skipping steps done. It should be tested first! (details / bitbucketweb)
  487. Changes to plot and postprocessing (details / bitbucketweb)
  488. histograms have no ticks or labels (details / bitbucketweb)
  489. added data for 2hyper (details / bitbucketweb)
  490. added results for 1hyper (details / bitbucketweb)
  491. working on hypersonic. added lag on composition construction. (details / bitbucketweb)
  492. Getting rid of the recursion for composition of maps (details / bitbucketweb)
  493. Input NMC to post processing script (details / bitbucketweb)
  494. first variation implemented. TODO: test it (details / bitbucketweb)
  495. added mpi_pool argument to diagnostic functions. Changed design of (details / bitbucketweb)
  496. fixed variance diagnostic routine (details / bitbucketweb)
  497. fixed routine variance diagnostic (details / bitbucketweb)
  498. data 3hyper (details / bitbucketweb)
  499. working on refinement (details / bitbucketweb)
  500. working on test case 2d (details / bitbucketweb)
  501. fixed file TransportMapDensities. The PullBackDensity was defined (details / bitbucketweb)
  502. pdf as exp(log_pdf) (details / bitbucketweb)
  503. Fixes to post-processing trim script (details / bitbucketweb)
  504. working on plots (details / bitbucketweb)
  505. working on plots of the first variation (details / bitbucketweb)
  506. Decoupled data analysis from plots (details / bitbucketweb)
  507. working on plots of first variation 2d (details / bitbucketweb)
  508. added diagonal transport map (details / bitbucketweb)
  509. adaptivity works on banana (details / bitbucketweb)
  510. adaptive refinement works on banana with hyper-cross enrichment (details / bitbucketweb)
  511. working on the banana (details / bitbucketweb)
  512. done with the banana example (details / bitbucketweb)
  513. started with stochastic volatility (details / bitbucketweb)
  514. added results 2 hyper (details / bitbucketweb)
  515. working on adaptivity for stochastic volatility (details / bitbucketweb)
  516. it somehow works on stoc vol 5 steps (details / bitbucketweb)
  517. removed data from branch (details / bitbucketweb)
  518. new enrichment and stopping strategy in first variation adaptivity. (details / bitbucketweb)
  519. preparing sensitivity tests (details / bitbucketweb)
  520. refinement routine done. to be tested (details / bitbucketweb)
  521. working on full algorithm for adaptivity (details / bitbucketweb)
  522. working on remove coefficients (details / bitbucketweb)
  523. first variation approach designed (details / bitbucketweb)
  524. added input arguments to scripts (details / bitbucketweb)
  525. 2hyper map 100 (details / bitbucketweb)
  526. refinement strategy includes check on sensitivity of variance diagnostic (details / bitbucketweb)
  527. data for stoc vol 2 hypers n100 (details / bitbucketweb)
  528. added analysis 2hyper 100steps (details / bitbucketweb)
  529. working on figures (details / bitbucketweb)
  530. working on plots (details / bitbucketweb)
  531. map from samples notebook started (details / bitbucketweb)
  532. post processing (details / bitbucketweb)
  533. map from samples notebook, code fine but maybe should have more text (details / bitbucketweb)
  534. moved samples notebook (details / bitbucketweb)
  535. new storage for first variation script (details / bitbucketweb)
  536. fixed storage adaptivity (details / bitbucketweb)
  537. fixing adaptivity for quadratures (details / bitbucketweb)
  538. working on examples for presentation (details / bitbucketweb)
  539. added output on refinement (details / bitbucketweb)
  540. improved total order multi index routine. (details / bitbucketweb)
  541. added output to adaptivity (details / bitbucketweb)
  542. getting data.. (details / bitbucketweb)
  543. running conditionals for alessio (details / bitbucketweb)
  544. improved postprocess (details / bitbucketweb)
  545. fixed adaptivity routine (details / bitbucketweb)
  546. right now the mpi design is a big mess... find an elegant way to get all (details / bitbucketweb)
  547. restructuring all mpi calls according to the new design (details / bitbucketweb)
  548. working on parallelization of objective functions (details / bitbucketweb)
  549. objective done for integrated exponential... (details / bitbucketweb)
  550. modifying regression routines. Todo also: fix the constraints in the (details / bitbucketweb)
  551. done with code rewriting. TODO: rewrite all tests and examples. (details / bitbucketweb)
  552. debuging: testing serial execution kl_divergence (details / bitbucketweb)
  553. testing minimization serial (details / bitbucketweb)
  554. minimization IE works. TODO: LS minimization and all parallel (details / bitbucketweb)
  555. all serial tests work (details / bitbucketweb)
  556. working on parallel tests (details / bitbucketweb)
  557. testing parallel on kl_minimization and L2_minimization (details / bitbucketweb)
  558. testing parallel on kl_minimization and L2_minimization (details / bitbucketweb)
  559. passing all tests (details / bitbucketweb)
  560. started with the documentation of MPI (details / bitbucketweb)
  561. going on with docs (details / bitbucketweb)
  562. fixed pdf/log_pdf for transprot map densities and going on with mpi (details / bitbucketweb)
  563. working on example (details / bitbucketweb)
  564. working on documentation (details / bitbucketweb)
  565. working on documentation (details / bitbucketweb)
  566. working on mpi examples (details / bitbucketweb)
  567. working on mpi examples.... (details / bitbucketweb)
  568. going on with mpi documentation. TODO: check examples... (details / bitbucketweb)
  569. updated examples (details / bitbucketweb)
  570. examples have been updated to use the new mpi interface (details / bitbucketweb)
  571. updated slurm script for examples (details / bitbucketweb)
  572. residual modifications to adaptivity routines (details / bitbucketweb)
  573. fixed bug in mpi_eval (details / bitbucketweb)
  574. working on examples (details / bitbucketweb)
  575. updated regression examples to use MPI (details / bitbucketweb)
  576. added action of hessian on routines and TransportMapBase. TODO: modify (details / bitbucketweb)
  577. action of the Hessian implemented for the kl-divergence and the l2 (details / bitbucketweb)
  578. finished last merge (details / bitbucketweb)
  579. working on 3hyper (details / bitbucketweb)
  580. fixed regression (details / bitbucketweb)
  581. fixed chacing of hessian. Now it is really not recomputed (details / bitbucketweb)
  582. fixed output hess (details / bitbucketweb)
  583. fixed typo in routines (details / bitbucketweb)
  584. batching implemented to be exthensively tested (details / bitbucketweb)
  585. working on unittests for l2_misfit (details / bitbucketweb)
  586. first test passed (details / bitbucketweb)
  587. adding tests (details / bitbucketweb)
  588. passing some of the tests... (details / bitbucketweb)
  589. misfit tests all pass (details / bitbucketweb)
  590. regression batching seems to work on unit test cases (details / bitbucketweb)
  591. almost ready to run 3hyper on cluster (details / bitbucketweb)
  592. almost ready to run 3hyper on cluster (details / bitbucketweb)
  593. fixed runner (details / bitbucketweb)
  594. removed data. use Dropbox folder for this (details / bitbucketweb)
  595. logging capabilities improved for both kl-divergence and regression (details / bitbucketweb)
  596. fixed scripts (details / bitbucketweb)
  597. fixes #63 (details / bitbucketweb)
  598. fixed serialization of the logger (un-pickable and thus removed from the (details / bitbucketweb)
  599. added curvature output on Hessian output (to check positive (details / bitbucketweb)
  600. mpi tutorial is done (details / bitbucketweb)
  601. working on cpp examples (details / bitbucketweb)
  602. updated stocvol analysis with new MPI (details / bitbucketweb)
  603. updated construction scripts (details / bitbucketweb)
  604. updated analysis (details / bitbucketweb)
  605. udated plotting for stoc vol (details / bitbucketweb)
  606. updated mpi-usage (details / bitbucketweb)
  607. re-activated var_diag_list (details / bitbucketweb)
  608. added debug code for Hessian conditioning (details / bitbucketweb)
  609. added no-marginals option in plotting (details / bitbucketweb)
  610. use gaussian graphs in algorithm (details / bitbucketweb)
  611. working with generated data (details / bitbucketweb)
  612. working on newly generated data (details / bitbucketweb)
  613. fixed analysis script (details / bitbucketweb)
  614. removed data folder durbin (details / bitbucketweb)
  615. updating adaptivity to new MPI (details / bitbucketweb)
  616. fixed merge with master. MPI functionalities updated (details / bitbucketweb)
  617. added possibility of pulling back through Laplace prior to adapt the map (details / bitbucketweb)
  618. improved postprocessing (details / bitbucketweb)
  619. added possibiltiy do inverse adaptivity (details / bitbucketweb)
  620. working on log-gauss Cox (details / bitbucketweb)
  621. added test for processes (details / bitbucketweb)
  622. working on log-cox densities (details / bitbucketweb)
  623. working on logcox (details / bitbucketweb)
  624. working on log-cox (details / bitbucketweb)
  625. working on setup of log gaussian cox (details / bitbucketweb)
  626. data generation done (details / bitbucketweb)
  627. working on log gaussian cox (details / bitbucketweb)
  628. plotting change in laplace postprocess (details / bitbucketweb)
  629. added pieces of grad_a_omega (details / bitbucketweb)
  630. testing new derivatives (details / bitbucketweb)
  631. cleaning before merge (details / bitbucketweb)
  632. fixes on the full transport maps (details / bitbucketweb)
  633. reorganizing examples (details / bitbucketweb)
  634. added Laplace scripts (details / bitbucketweb)
  635. restructuring examples (details / bitbucketweb)
  636. restructuring examples (details / bitbucketweb)
  637. restructuring stochastic volatility example (details / bitbucketweb)
  638. restructuring stochastic volatility (details / bitbucketweb)
  639. restructuring LogGaussCox (details / bitbucketweb)
  640. restructuring (details / bitbucketweb)
  641. working on LogGaussianCox postprocessing for generic maps (details / bitbucketweb)
  642. working on LogGaussianCox (details / bitbucketweb)
  643. started working on script for generic transport map construction (details / bitbucketweb)
  644. updated contributors list and author list in files (details / bitbucketweb)
  645. updated readme (details / bitbucketweb)
  646. updated readme (details / bitbucketweb)
  647. working on direct map script (details / bitbucketweb)
  648. started with xml specification of maps (details / bitbucketweb)
  649. delta method almost done, fibers incorrect in TransportMapBase (details / bitbucketweb)
  650. working on xml descriptors (details / bitbucketweb)
  651. working on xml descriptor parsers (details / bitbucketweb)
  652. updated authors and emails (details / bitbucketweb)
  653. added xml loader for tests (details / bitbucketweb)
  654. reduced dimension of linear map Hessian return (details / bitbucketweb)
  655. updated authors and emails... (details / bitbucketweb)
  656. working on constructor of linear span approximations (details / bitbucketweb)
  657. working on the XML schema... (details / bitbucketweb)
  658. working on the schema and validating it... (details / bitbucketweb)
  659. working on the definition of a syntax for the components (details / bitbucketweb)
  660. working on the definition of a syntax for the components (details / bitbucketweb)
  661. working on basis (details / bitbucketweb)
  662. added example structures (details / bitbucketweb)
  663. working on the parser in TriangularTransportMaps.py (details / bitbucketweb)
  664. working on the parser for IntegratedExpTriMap (details / bitbucketweb)
  665. updated author and contact in init file (details / bitbucketweb)
  666. parser.... (details / bitbucketweb)
  667. sprinting on LogGaussianCoxProcess. The script tmap-direct will need to (details / bitbucketweb)
  668. test was run successfully for nobs=30. the tmap-direct script is in (details / bitbucketweb)
  669. working on independent samplers (details / bitbucketweb)
  670. working on rejection sampler (details / bitbucketweb)
  671. working on samplers (details / bitbucketweb)
  672. working on effective sample size criteria... (details / bitbucketweb)
  673. ess implemented (details / bitbucketweb)
  674. working on postprocess scripts (details / bitbucketweb)
  675. bigger head map for log gaussian cox (details / bitbucketweb)
  676. working on the sampling of tmap (details / bitbucketweb)
  677. almost done with figures for Log Gauss Cox (details / bitbucketweb)
  678. working on Metropolis samples. Added h5py dependency (details / bitbucketweb)
  679. tests gradahessxpartialxd (details / bitbucketweb)
  680. one bug less to be fixed... (details / bitbucketweb)
  681. added test_functions (details / bitbucketweb)
  682. figures and scripts for log gauss cox are done (details / bitbucketweb)
  683. added batching for tmap-postprocess but needs to be improved (details / bitbucketweb)
  684. streamlining scripts for sequential inference postprocessing (details / bitbucketweb)
  685. heavy modification of the postprocess scripts for stoch vol. Sequential (details / bitbucketweb)
  686. scripts for paper working... (details / bitbucketweb)
  687. working on postprocessing plotting (details / bitbucketweb)
  688. merging (details / bitbucketweb)
  689. prepared plotting for paper (details / bitbucketweb)
  690. almost all figures are done (details / bitbucketweb)
  691. Christmas plots (details / bitbucketweb)
  692. working on figures (details / bitbucketweb)
  693. working on parsing of IntExpNonLinearHeadMap-5d.xml (details / bitbucketweb)
  694. working on parsing of IntExpNonLinearHeadMap-5d.xml (details / bitbucketweb)
  695. working on functional approximations. Allow for the use of (details / bitbucketweb)
  696. added the approx layer in order to mimic the class hierarchy (details / bitbucketweb)
  697. think a better design for tensorized/non-tensorized basis... (details / bitbucketweb)
  698. working on parsing of functionals (details / bitbucketweb)
  699. working on tensorization of basis.... (details / bitbucketweb)
  700. moving on to the parsing of basis (details / bitbucketweb)
  701. constructor works for IntExpNonLinearHeadMap-5d.xml and (details / bitbucketweb)
  702. removed HardVars which is cretated at sdist time (details / bitbucketweb)
  703. added creation of hardcoded variables (xml schemes) at install and (details / bitbucketweb)
  704. working on serializing xml unit tests. (details / bitbucketweb)
  705. figure out how to define classes on the fly (details / bitbucketweb)
  706. full order works (details / bitbucketweb)
  707. monotonic lin span approximation get instantiated, but we need to add a (details / bitbucketweb)
  708. tolerance computed with delta method (details / bitbucketweb)
  709. working on RadialBasisFunctions support... Maybe we need to interface (details / bitbucketweb)
  710. loading from xml works, but multi-index loading and xml storing (details / bitbucketweb)
  711. construction of multi-idx map from xml works (details / bitbucketweb)
  712. working on tests for scripts (details / bitbucketweb)
  713. done with the tests for the scripts (details / bitbucketweb)
  714. started working on integrated squared approximation (details / bitbucketweb)
  715. working on test_transportmaps inverse.. (details / bitbucketweb)
  716. working on kl divergence tests (details / bitbucketweb)
  717. working on tests and examples (details / bitbucketweb)
  718. test_xml works (details / bitbucketweb)
  719. removed Full and Total order approximations. Now they are all (details / bitbucketweb)
  720. starting the implementation of the integrated squared linear span (details / bitbucketweb)
  721. working on the intsq approximation (details / bitbucketweb)
  722. going on... (details / bitbucketweb)
  723. progressing... (details / bitbucketweb)
  724. we are over the hill.. (details / bitbucketweb)
  725. Class IntegratedSquaredParametricFunctionApproximation done. TODO: (details / bitbucketweb)
  726. test_transportmaps pass (details / bitbucketweb)
  727. working on minimization tests... something wrong with batching.. (details / bitbucketweb)
  728. working on int sq (details / bitbucketweb)
  729. interfacing with PosDefConstSquaredExtHermitePhysicistsFunction (details / bitbucketweb)
  730. something is wrong with the pos def squared implementation... (details / bitbucketweb)
  731. working on test_transports for new Inetgrated Squared approximations (details / bitbucketweb)
  732. squared const ext hermite prob func works but slow. To be profiled (details / bitbucketweb)
  733. integrated squared is almost ready. Implementation sufficient for merge (details / bitbucketweb)
  734. ordering and post-processing (details / bitbucketweb)
  735. added functions needed for variance of omega, for algebraic basis (details / bitbucketweb)
  736. added n_edges to graphs and normalized delta plots (details / bitbucketweb)
  737. fixed postprocess script (details / bitbucketweb)
  738. fixed input/raw_input (details / bitbucketweb)
  739. working on additional functions for list composite map (details / bitbucketweb)
  740. working on hess_x (details / bitbucketweb)
  741. implemented ListCompositeTransportMap. It's missing some (details / bitbucketweb)
  742. imporved documentation tmap-direct (details / bitbucketweb)
  743. cleaning: mapsFromSamples dir (details / bitbucketweb)
  744. working on scripts interface (details / bitbucketweb)
  745. working on help for scripts (details / bitbucketweb)
  746. working on scripts (details / bitbucketweb)
  747. working on scripts (details / bitbucketweb)
  748. algorithm with graphs is now test file (details / bitbucketweb)
  749. working on postprocessing scripts (details / bitbucketweb)
  750. fixed disclaimer LGPL (details / bitbucketweb)
  751. tests work for the scripts in place. start docs. (details / bitbucketweb)
  752. restructured documentation. Prepared for scripts documentation (details / bitbucketweb)
  753. working on documentation of cli (details / bitbucketweb)
  754. working on bod (details / bitbucketweb)
  755. fixed references and working on bod (details / bitbucketweb)
  756. working on unbiased samplers (details / bitbucketweb)
  757. working on unbiased sampling (details / bitbucketweb)
  758. data generation for bod (details / bitbucketweb)
  759. done with bod (details / bitbucketweb)
  760. done with bod (details / bitbucketweb)
  761. working on xml docs (details / bitbucketweb)
  762. xml docs done (details / bitbucketweb)
  763. xml done (details / bitbucketweb)
  764. xml done (details / bitbucketweb)
  765. gumbel ready for presentation too (details / bitbucketweb)
  766. fixed gumbel also for documentation (details / bitbucketweb)
  767. added grad_x_inverse and log_deg_grad_x_inverse methods (details / bitbucketweb)
  768. working on bod presentation (details / bitbucketweb)
  769. going on with bod presentation (details / bitbucketweb)
  770. almost done with bod (details / bitbucketweb)
  771. bod for presentation ready (details / bitbucketweb)
  772. done with tm examples (details / bitbucketweb)
  773. done with xml (details / bitbucketweb)
  774. started with cli (details / bitbucketweb)
  775. started working on the stochastic volatility density... (details / bitbucketweb)
  776. started with writing of classes for decomposable densities (details / bitbucketweb)
  777. started with writing of classes for decomposable densities (details / bitbucketweb)
  778. going on with densities (details / bitbucketweb)
  779. working on classes for sequential inference (details / bitbucketweb)
  780. working on rewriting stocvol densities (details / bitbucketweb)
  781. wrapping up stocvol density (details / bitbucketweb)
  782. testing new implementation! (details / bitbucketweb)
  783. equivalent density! TODO: MarkovComponent (details / bitbucketweb)
  784. working on markov component. (details / bitbucketweb)
  785. working on markov comp (details / bitbucketweb)
  786. one residual error in the hessian... (details / bitbucketweb)
  787. The density is set up and ready to be used (details / bitbucketweb)
  788. working on documentation and refactored examples of densities (details / bitbucketweb)
  789. documenting stoc volatility (details / bitbucketweb)
  790. going on with sequential inference example (details / bitbucketweb)
  791. working on docs for stocvol example (details / bitbucketweb)
  792. reorg, now with dirs (details / bitbucketweb)
  793. fix directory for monte carlo run (details / bitbucketweb)
  794. adding data dir (details / bitbucketweb)
  795. removed tabulate (details / bitbucketweb)
  796. fixed import for python2 (details / bitbucketweb)
  797. added missing densities (details / bitbucketweb)
  798. removed some example densities for now (details / bitbucketweb)
  799. acme data clean (details / bitbucketweb)
  800. working on stoc vol example (details / bitbucketweb)
  801. working on first step stoc vol (details / bitbucketweb)
  802. working on first step stoc vol (details / bitbucketweb)
  803. almost done with stoch vol (details / bitbucketweb)
  804. doing stoc vol post processing (details / bitbucketweb)
  805. sequential inference needs a longer example (details / bitbucketweb)
  806. started with SeqHMM integrator (details / bitbucketweb)
  807. finished sequential inference... (details / bitbucketweb)
  808. fixed imports of integrator. TODO: documentation of the integrator class (details / bitbucketweb)
  809. fixed typos in examples (details / bitbucketweb)
  810. added svg data assimilation (details / bitbucketweb)
  811. added inkscape preamble (details / bitbucketweb)
  812. updated figures and notation in sequential inference (details / bitbucketweb)
  813. fixed pictures (details / bitbucketweb)
  814. fixed bod (details / bitbucketweb)
  815. working on filtering (details / bitbucketweb)
  816. done with getting filtering out (details / bitbucketweb)
  817. ok with filtering of stoc vol (details / bitbucketweb)
  818. added the script for sequential inference (details / bitbucketweb)
  819. first implementation of sampler works on postprocessing (details / bitbucketweb)
  820. added stochastic volatility folder (details / bitbucketweb)
  821. adding ess estimation in unbiased sampling script (details / bitbucketweb)
  822. postprocess sampling fixed (details / bitbucketweb)
  823. working on command line commands (details / bitbucketweb)
  824. working on command line documentation! (details / bitbucketweb)
  825. working on command line documentation! (details / bitbucketweb)
  826. working on cli (details / bitbucketweb)
  827. going on with cli (details / bitbucketweb)
  828. working on cli postprocess (details / bitbucketweb)
  829. working on cli postprocess (details / bitbucketweb)
  830. cli done (details / bitbucketweb)
  831. dummy file for volatility data (details / bitbucketweb)
  832. added missing file (details / bitbucketweb)
  833. fixing stile of documentation (details / bitbucketweb)
  834. refactored Density->Distribution (details / bitbucketweb)
  835. removed unused functions in Diagnostics.Plotting (details / bitbucketweb)
  836. checked default constructors. fixes #34 (details / bitbucketweb)
  837. added deprecation flag for old sub-module Denisities (details / bitbucketweb)
  838. fixed logging of solving stats (details / bitbucketweb)
  839. removed default dependency on optional packages (details / bitbucketweb)
  840. disabled parallel tests if MPI is not supported (details / bitbucketweb)
  841. downgraded documentation to TM 1.0 (details / bitbucketweb)
  842. removed circular import in all the submodules (details / bitbucketweb)
  843. local merge (details / bitbucketweb)
  844. installation goes through on MAC. Going on with documentation (details / bitbucketweb)
  845. working on intro (details / bitbucketweb)
  846. checking for broken links (details / bitbucketweb)
  847. fixing readme (details / bitbucketweb)
  848. fixed wrong merge.. (details / bitbucketweb)
  849. working on alinged-marginals. Check on quadratures output as well. (details / bitbucketweb)
  850. added marginal plotting (details / bitbucketweb)
  851. sequential-tm with restart (details / bitbucketweb)
  852. tmap-sequential-tm can now re-start. Added verbose options and (details / bitbucketweb)
  853. working on postprocess for sequential algorithm (details / bitbucketweb)
  854. added postprocess for sequential inference (details / bitbucketweb)
  855. done with scripts (details / bitbucketweb)
  856. working on documentation of inverse from samples (details / bitbucketweb)
  857. working on inverse sparse transport (details / bitbucketweb)
  858. added inverse stochastic volatility example (details / bitbucketweb)
  859. added figures for cli.ipynb (details / bitbucketweb)
  860. working on class diagram (details / bitbucketweb)
  861. working on the api (details / bitbucketweb)
  862. removed autosummary (details / bitbucketweb)
  863. included inheritance graph. Fixes #27 (details / bitbucketweb)
  864. fixed dictionary get for python2. Fixes #75 (details / bitbucketweb)
  865. updated version 1.0.0b1 and copyright (details / bitbucketweb)
  866. updated info (details / bitbucketweb)
  867. working on upload script (details / bitbucketweb)
  868. working on release testpypi (details / bitbucketweb)
  869. modified warning for non-supported features (details / bitbucketweb)
  870. fixed linking to SpectralToolbox. Now it is done at first import (details / bitbucketweb)
  871. fixed issue in frozen distributions. v1.0.0b4 (details / bitbucketweb)
  872. fixed xml linking (details / bitbucketweb)
  873. fixed test_xml and test_scripts (details / bitbucketweb)
  874. fixed some settings for unit tests failing on kl-divergence due to fd (details / bitbucketweb)
  875. refactoring Examples for release (details / bitbucketweb)
  876. cleaning up before release (details / bitbucketweb)
  877. working on mirroring (details / bitbucketweb)
  878. after moving (details / bitbucketweb)
  879. working on public mirroring (details / bitbucketweb)
  880. working on public mirroring (details / bitbucketweb)
  881. added deprecated frozen denisties (details / bitbucketweb)
  882. working on mirror (details / bitbucketweb)
  883. workin on mirroring (details / bitbucketweb)
  884. fixed (maybe) base_density/base_distribution inconsistency (details / bitbucketweb)
  885. fixed (again maybe) base_density/base_distribution inconsistency (details / bitbucketweb)
  886. mirroring script ready (details / bitbucketweb)
  887. fixed readme (details / bitbucketweb)
  888. bitbucket-pipelines.yml created online with Bitbucket (details / bitbucketweb)
  889. bitbucket-pipelines.yml edited online with Bitbucket (details / bitbucketweb)
  890. bitbucket-pipelines.yml edited online with Bitbucket (details / bitbucketweb)
  891. bitbucket-pipelines.yml edited online with Bitbucket (details / bitbucketweb)
  892. bitbucket-pipelines.yml edited online with Bitbucket (details / bitbucketweb)
  893. bitbucket-pipelines.yml edited online with Bitbucket (details / bitbucketweb)
  894. bitbucket-pipelines.yml edited online with Bitbucket (details / bitbucketweb)
  895. bitbucket-pipelines.yml edited online with Bitbucket (details / bitbucketweb)
  896. bitbucket-pipelines.yml edited online with Bitbucket (details / bitbucketweb)
  897. bitbucket-pipelines.yml deleted online with Bitbucket (details / bitbucketweb)
  898. working on jenkins script (details / bitbucketweb)
  899. testing push with jenkins (details / bitbucketweb)
  900. updated jenkins script (details / bitbucketweb)
  901. fixing pip for long path.. not really needed for tests on bitbucket (details / bitbucketweb)
  902. jenkins... (details / bitbucketweb)
  903. jenkins... (details / bitbucketweb)
  904. jenkins... (details / bitbucketweb)
  905. jenkins... (details / bitbucketweb)
  906. jenkins... (details / bitbucketweb)
  907. jenkins... (details / bitbucketweb)
  908. jenkins... (details / bitbucketweb)
  909. jenkins... (details / bitbucketweb)
  910. jenkins... (details / bitbucketweb)
  911. jenkins... (details / bitbucketweb)
  912. jenkins... (details / bitbucketweb)
  913. Jenkins config: testing test_scripts (details / bitbucketweb)
  914. fixed logging of solving stats (details / bitbucketweb)
  915. Jenkins tests (details / bitbucketweb)
  916. Jenkins... (details / bitbucketweb)
  917. Jenkins... (details / bitbucketweb)
  918. Jenkins... (details / bitbucketweb)
  919. Jenkins... (details / bitbucketweb)
  920. Jenkins... (details / bitbucketweb)
  921. Jenkins... (details / bitbucketweb)
  922. Jenkins... (details / bitbucketweb)
  923. Jenkins... (details / bitbucketweb)
  924. Jenkins... (details / bitbucketweb)
  925. Jenkins: exit(1) if packages failed (details / bitbucketweb)
  926. removed cached dir (details / bitbucketweb)
  927. Jenkins... working on setup (details / bitbucketweb)
  928. jenkins.. (details / bitbucketweb)
  929. jenkins.. (details / bitbucketweb)
  930. jenkins... (details / bitbucketweb)
  931. jenkins... (details / bitbucketweb)
  932. jenkins testing all (details / bitbucketweb)
  933. updated email (details / bitbucketweb)
  934. removed e-mail contact (details / bitbucketweb)
  935. updated readme (details / bitbucketweb)
  936. updated readme (details / bitbucketweb)
  937. updated readme (details / bitbucketweb)
  938. reduce verbosity in tests (details / bitbucketweb)
  939. updated scripts and logging (details / bitbucketweb)
  940. fixed logging (details / bitbucketweb)
  941. removed MPI support for macys-Sierra (details / bitbucketweb)
  942. fixed log levels.. (details / bitbucketweb)
  943. fixed errors in grad_a_hess_x and grad_a_hess_x_log_det_grad_x (details / bitbucketweb)
  944. removed tests for grad_a_hess_x_log_det_grad_x. Filed issue #76 (details / bitbucketweb)
  945. updated parallelization and fixed failing test in test_kl_divergence (details / bitbucketweb)
  946. fixing test_kl_divergence (maybe) (details / bitbucketweb)
  947. turning MPI=True on Macys-Sierra (details / bitbucketweb)
  948. fixed linear map in IS kl_divergence (details / bitbucketweb)
  949. added jenkins tests for testpypi (details / bitbucketweb)
  950. modified linear2d test in order to make it more amenable for PushForward (details / bitbucketweb)
  951. simplified setup.py (standardized) (details / bitbucketweb)
  952. the user is now required to pre-install numpy (details / bitbucketweb)
  953. fixed jenkins script (details / bitbucketweb)
  954. removed hardvars (details / bitbucketweb)
  955. removed hardvars (details / bitbucketweb)
  956. removed pushforward kl_div tests (details / bitbucketweb)
  957. split serial and parallel tests (details / bitbucketweb)
  958. testing serial (details / bitbucketweb)
  959. added mpi option (details / bitbucketweb)
  960. fixed check on mpi in jenkins (details / bitbucketweb)
  961. added lag on mpi tests in order to accommodate for closing and opening (details / bitbucketweb)
  962. set unique random seed=1 (details / bitbucketweb)
  963. adding badges to the documentation (details / bitbucketweb)
  964. disabled MPI on sierra (details / bitbucketweb)
  965. relaxed check on l2 minimization tolerance (details / bitbucketweb)
  966. updated badges and upload code (details / bitbucketweb)
  967. lower tolerance on transportmap_distributions (details / bitbucketweb)
  968. fixed namespace and restored tolerance in transportmap_distributions (details / bitbucketweb)
  969. updating index (details / bitbucketweb)
  970. added verbose output for failed finite difference (details / bitbucketweb)
  971. added verbose output for failed finite difference (details / bitbucketweb)
  972. set integrated squared to linear for test_transportmap_distributions (details / bitbucketweb)
  973. extending readme (details / bitbucketweb)
  974. README.rst edited online with Bitbucket (details / bitbucketweb)
  975. README.rst edited online with Bitbucket (details / bitbucketweb)

Started by BitBucket push by dabi86 (2 times)

Revision: 8736807c0b80d1be611584e0822204a4b5d757b8
Repository: git@bitbucket.org:dabi86/transportmaps-private.git
  • refs/remotes/origin/hotfixes/master
Configuration Matrixgccclang
macyspython2
python3
macys_Sierrapython2
python3
reynoldspython2
python3
reynolds-ubuntu16python2
python3