Changes
#42 (Dec 3, 2019, 12:25:47 PM)
- fix committed for mpi with inverse from samples. The mpi_pool is not attached to objects anymore (so that it will be never serialized), but passed along with parameters — dabi / bitbucketweb
- additional fixes — dabi / bitbucketweb
- test-source.sh added PATH for Jenkins — dabi / bitbucketweb
- renamed aux for windows benefit... — dabi / bitbucketweb
#41 (Oct 24, 2019, 3:11:27 AM)
- renamed aux for windows benefit... — dabi / bitbucketweb
#40 (Jun 12, 2019, 2:03:16 PM)
- test-source.sh added PATH for Jenkins — dabi / bitbucketweb
#38 (Mar 31, 2019, 1:22:58 PM)
- fix committed for mpi with inverse from samples. The mpi_pool is not attached to objects anymore (so that it will be never serialized), but passed along with parameters — dabi / bitbucketweb
- additional fixes — dabi / bitbucketweb
#37 (Dec 8, 2018, 8:17:00 PM)
- gumbel example re-run for documentation — dabi / bitbucketweb
#36 (Dec 8, 2018, 6:43:07 PM)
- fixed documentation — dabi / bitbucketweb
#35 (Aug 2, 2018, 11:06:30 AM)
- throwing an error if ders!=[0,1] used in decoupled LinearSpan min_kl — dabi / bitbucketweb
- fixed last fix... — dabi / bitbucketweb
- generalized input arguments to ParametricDistriubtion, so that calls can — dabi / bitbucketweb
- generalized input arguments to ParametricDistriubtion, so that calls can — dabi / bitbucketweb
- fixing bugs in tutorial examples — dabi / bitbucketweb
- in the process of fixing documentation. Todo: sequential stochastic — dabi / bitbucketweb
- fixed direct construction tutorial — dabi / bitbucketweb
- checked inverse gumbel tutorial — dabi / bitbucketweb
- updated version — dabi / bitbucketweb
#34 (May 2, 2018, 9:44:22 AM)
- updated script for public mirroring — dabi / bitbucketweb
#33 (May 1, 2018, 10:15:15 AM)
- removed unnecessary folders in Examples and updated mirroring script — dabi / bitbucketweb
- added algorithms documentation section — dabi / bitbucketweb
#32 (Apr 30, 2018, 4:35:33 PM)
- example on Gumbel 1d — rsb / bitbucketweb
- started with the Helmholtz equation — dabi / bitbucketweb
- integrated SING into TransportMaps — rebeccae.morrison / bitbucketweb
- cleaning SING files — rebeccae.morrison / bitbucketweb
- l1 tests and plotting scripts — rebeccae.morrison / bitbucketweb
- working on Helmholtz example from Ghattas' paper — dabi / bitbucketweb
- working on Helmholtz — dabi / bitbucketweb
- starting to work on actual probabilistic model — dabi / bitbucketweb
- renaming some sun_sing files — rebeccae.morrison / bitbucketweb
- updating run_sing files to run with SI.SING — rebeccae.morrison / bitbucketweb
- actually updating to run with SI.SING (ignore last commit) — rebeccae.morrison / bitbucketweb
- testing l1 — rebeccae.morrison / bitbucketweb
- l1 regularization — rebeccae.morrison / bitbucketweb
- Updated regularized map - SING now runs with 2 types of reg and no reg. — rsb / bitbucketweb
- relaxed rademacher, butterfly distribution, and more properties of — rebeccae.morrison / bitbucketweb
- relaxed rademacher uses uniform over (-1,1), not (0,1) — rebeccae.morrison / bitbucketweb
- node ordering fix — rebeccae.morrison / bitbucketweb
- changing parameters in Helmholtz — dabi / bitbucketweb
- added stub solver for EIT problem — dabi / bitbucketweb
- working on surface gradient — dabi / bitbucketweb
- working on CEM — dabi / bitbucketweb
- fixed EIT working on CEM — dabi / bitbucketweb
- plotting scripts for nips — rebeccae.morrison / bitbucketweb
- turned hessian off in sing — rebeccae.morrison / bitbucketweb
- mc studies 1step algs — rsb / bitbucketweb
- More MC Studies for SING — rsb / bitbucketweb
- working on models — dabi / bitbucketweb
- No electrodes model works — dabi / bitbucketweb
- working on discretized model — dabi / bitbucketweb
- working on discretized model — dabi / bitbucketweb
- gmsh mesh generation for discretized test — dabi / bitbucketweb
- working on complete model — dabi / bitbucketweb
- starting to work on adjoint equations — dabi / bitbucketweb
- messed up with no-electrodes model.. — dabi / bitbucketweb
- working on fast sensor function — dabi / bitbucketweb
- fixed sensor expression — dabi / bitbucketweb
- working on Dirichlet to Neumann model — dabi / bitbucketweb
- working on adjoint for no electrode model — dabi / bitbucketweb
- adjoint done — dabi / bitbucketweb
- gradient and Hessian working — dabi / bitbucketweb
- setting up the posterior distribution — dabi / bitbucketweb
- working on likelihood functions — dabi / bitbucketweb
- working on posterior distribution — dabi / bitbucketweb
- storage/loading of distribution works — dabi / bitbucketweb
- working on action of Hessian — dabi / bitbucketweb
- working on action_hess_a for transport map distributions — dabi / bitbucketweb
- working on minimization of kl divergence using action of the Hessian — dabi / bitbucketweb
- working on kl minimization tests — dabi / bitbucketweb
- unit tests are passing. todo: caching in Likelihood to avoid extra — dabi / bitbucketweb
- the distribution object is now pre-broadcasted to the children in — dabi / bitbucketweb
- fixed test_kl_divergence — dabi / bitbucketweb
- working on caching of Likelihood evaluations — dabi / bitbucketweb
- fixed init function — dabi / bitbucketweb
- The action of the Hessian is ready. Fixes #31. Caching issues reserved — dabi / bitbucketweb
- introducing cached and counted decorators — dabi / bitbucketweb
- adding counting output — dabi / bitbucketweb
- caching to be finished in TransportMaps and Maps in general. Then I need — dabi / bitbucketweb
- still working on maps... — dabi / bitbucketweb
- working on distributions — dabi / bitbucketweb
- testing caching. todo: caching in optimization problems — dabi / bitbucketweb
- added caching and counting wherever needed (maybe missing some spots). — dabi / bitbucketweb
- working on caching in Hessian. Todo: update and run unittests — dabi / bitbucketweb
- adding reset counters functionalities — dabi / bitbucketweb
- counting and resetting works. Caching also seems to work. TODO: — dabi / bitbucketweb
- caching does what is supposed to do! — dabi / bitbucketweb
- added manual test for caching and counting — dabi / bitbucketweb
- working on caching minimization routine — dabi / bitbucketweb
- working on unit tests for kl-divergence — dabi / bitbucketweb
- working on test_kl_divergence.py — dabi / bitbucketweb
- fixing an error at a time... — dabi / bitbucketweb
- kl_min tests work! — dabi / bitbucketweb
- fixing all unit tests — dabi / bitbucketweb
- porting MPI implementation to mpi_map v2.0 — dabi / bitbucketweb
- porting to mpi_map v2.0 completed. ToBeTested!! — dabi / bitbucketweb
- mpi_map v2 integrated and passing unit tests — dabi / bitbucketweb
- gathering of ncalls and nevals count at the end of optimization done — dabi / bitbucketweb
- passes unit tests — dabi / bitbucketweb
- now pointing to MPI_Pool_v2 in mpi_map v2.0 — dabi / bitbucketweb
- returning latest cache within log dictionary — dabi / bitbucketweb
- fixed py2/py3 issue with cached decorator — dabi / bitbucketweb
- fixed py2/py3 issue with cached decorator — dabi / bitbucketweb
- fixed py2/py3 issue with cached decorator — dabi / bitbucketweb
- fixing py2/py3 handling of *args and **kwargs (PEP3102) — dabi / bitbucketweb
- working on target distribution — dabi / bitbucketweb
- working on mpi evaluation of target density — dabi / bitbucketweb
- working on constant field data generation and parallel implementation — dabi / bitbucketweb
- working on speeding up function and gradient evaluatiions — dabi / bitbucketweb
- implemented fungrad — dabi / bitbucketweb
- working of action of Hessian — dabi / bitbucketweb
- mpi implementation not working... — dabi / bitbucketweb
- staring solving simple problems.. — dabi / bitbucketweb
- working on constant field problem and parallelization — dabi / bitbucketweb
- working on the problem set up — dabi / bitbucketweb
- data generation for constant field works — dabi / bitbucketweb
- working on adjoint for field — dabi / bitbucketweb
- fixed gradient! — dabi / bitbucketweb
- working on Hessian of EIT problem — dabi / bitbucketweb
- working on hessian — dabi / bitbucketweb
- fixed counter reset in some classes — dabi / bitbucketweb
- fixing regularization — dabi / bitbucketweb
- fixed caching for tuple_grad_a — dabi / bitbucketweb
- fixed some issues with tests and new counting decorators — dabi / bitbucketweb
- action of the Hessian for EIT works. To be integrated in distribution — dabi / bitbucketweb
- eit hessian works with caching of solution and adjoints — dabi / bitbucketweb
- EIT field distribution works with MPI — dabi / bitbucketweb
- added possibility to add real fields by expression — dabi / bitbucketweb
- disabled plotting if not available — dabi / bitbucketweb
- distributions work on cluster — dabi / bitbucketweb
- made EIT solver into a class — dabi / bitbucketweb
- working on validators — dabi / bitbucketweb
- working on saa — dabi / bitbucketweb
- implementing gradient based validators — dabi / bitbucketweb
- validators... — dabi / bitbucketweb
- working on adaptivity algorithm — dabi / bitbucketweb
- working on the adaptivity algorithm — dabi / bitbucketweb
- adding adaptivity options to tmap-tm — dabi / bitbucketweb
- working on launching script tmap-tm — dabi / bitbucketweb
- changing builder classes to imbed parameters and take distributions on — dabi / bitbucketweb
- going through banana example — dabi / bitbucketweb
- working on adaptivity on banana — dabi / bitbucketweb
- adaptivity on banana almost work — dabi / bitbucketweb
- adaptivity works on banana. a lot to do yet... — dabi / bitbucketweb
- improving parallelization — dabi / bitbucketweb
- splitted first variation computation for better parallelization — dabi / bitbucketweb
- adaptivity works on banana without hyper — dabi / bitbucketweb
- working on low-rank approximation of Hessians — dabi / bitbucketweb
- working on laplace approximation for Bayesian inverse problems, where — dabi / bitbucketweb
- working on low-rank approximation of covariance in bayesian problem — dabi / bitbucketweb
- working on low-rank approximation — dabi / bitbucketweb
- added logging information in postprocessing script — dabi / bitbucketweb
- low-rank Laplace approximation works — dabi / bitbucketweb
- applying Laplace to EIT — dabi / bitbucketweb
- working on composition of Likelihood with maps — dabi / bitbucketweb
- working on composition of Likelihood with maps — dabi / bitbucketweb
- composition of functions and map now is possible. working on laplace of — dabi / bitbucketweb
- working on laplace approximation of EIT — dabi / bitbucketweb
- debugging action of Hessian — dabi / bitbucketweb
- checking hessian action.. — dabi / bitbucketweb
- working on finite difference test for Hessian — dabi / bitbucketweb
- checking Hessian for distribution — dabi / bitbucketweb
- fixed withening script. Now action of Hessian works with MPI — dabi / bitbucketweb
- working on EIT adaptivity — dabi / bitbucketweb
- added missing functions to LinearTransportMap. Added unit tests for it — dabi / bitbucketweb
- modified caching of EIT solutions so that the cache is now pickable. — dabi / bitbucketweb
- added verbosity option in adaptivity algorithms and fixed bug in action — dabi / bitbucketweb
- added intermediate storage capability for adaptivity — dabi / bitbucketweb
- added output for lower and upper bounds in saa — dabi / bitbucketweb
- fixed bug in tmap-tm and in test_distribution.py for EIT — dabi / bitbucketweb
- added distributed sampling for MC sampling in minimize_kl_divergence — dabi / bitbucketweb
- fixed sampling for inverse maps from samples (disabled distributed — dabi / bitbucketweb
- fixed distributed sampling for linear span kl minimization — dabi / bitbucketweb
- fixed action Hessian with regularization — dabi / bitbucketweb
- simplified regularization of action hessian regularization — dabi / bitbucketweb
- fixed relative tolerance in validator — dabi / bitbucketweb
- fixed relative tolerance in validator — dabi / bitbucketweb
- remove unnecessary output form EIT — dabi / bitbucketweb
- changed active variable indicator to E[|x|] — dabi / bitbucketweb
- tryna generate non-gaussian data — rebeccae.morrison / bitbucketweb
- working on reload feature for tmap-tm — dabi / bitbucketweb
- reloading done for first variation adaptivity. to be checked in other — dabi / bitbucketweb
- added some output to First variation algorithm — dabi / bitbucketweb
- fixed restarting and grad_x for target in EIT — dabi / bitbucketweb
- added field full_basis_list to function approximations, to be used in — dabi / bitbucketweb
- fixed adaptivity accordingly to previous full_basis_list at the function — dabi / bitbucketweb
- running aerostruct and copula data — rebeccae.morrison / bitbucketweb
- committing data samples for copula data — rebeccae.morrison / bitbucketweb
- fixed first variation computation — dabi / bitbucketweb
- added plot sample for post process in EIT — dabi / bitbucketweb
- added a non-gaussian chain dataset — rebeccae.morrison / bitbucketweb
- added full_basis_list feature to xml map structure loading — dabi / bitbucketweb
- fixed full_basis_list to save in memory allocation — dabi / bitbucketweb
- minor testing datasets changes — rebeccae.morrison / bitbucketweb
- check for product distribution — rebeccae.morrison / bitbucketweb
- removed matplotlib from imports — rebeccae.morrison / bitbucketweb
- scikit-sparse reqs — rebeccae.morrison / bitbucketweb
- changed googleanalytics requirements — dabi / bitbucketweb
- starting jupyter notebook for sing — rebeccae.morrison / bitbucketweb
- looking at copula data inverse covariance — rebeccae.morrison / bitbucketweb
- working on coarser test case — dabi / bitbucketweb
- fixed several bugs in adaptivity and tests — dabi / bitbucketweb
- fixed get state in first variation builder — dabi / bitbucketweb
- added line search options in tmap-tm — dabi / bitbucketweb
- fixed kladaptivity serialization and regression regularization — dabi / bitbucketweb
- fixed gx_gt_kl batched evaluation — dabi / bitbucketweb
- added sing notebook example — rebeccae.morrison / bitbucketweb
- fixing adaptivity here and there.. — dabi / bitbucketweb
- integrated documentation for SING algorithm — dabi / bitbucketweb
- added postprocessing functionalities for adaptivity — dabi / bitbucketweb
- added double circle phantom — dabi / bitbucketweb
- fixed store function in tmap-tm — dabi / bitbucketweb
- added argument for line search delta — dabi / bitbucketweb
- added delta parameter for line search — dabi / bitbucketweb
- fixed documentation SING — dabi / bitbucketweb
- fixing unit tests; — dabi / bitbucketweb
- fixed laplace approximation starting point — dabi / bitbucketweb
- documenting fv adaptivity — dabi / bitbucketweb
- preparing release v2.0b0 — dabi / bitbucketweb
- v2.0b0: ready for unit-testing — dabi / bitbucketweb
- fixed matplotlib dependence — dabi / bitbucketweb
- fixed process_time PyV3 PyV2 — dabi / bitbucketweb
- fixed processtime name — dabi / bitbucketweb
- fixing bugs for release — dabi / bitbucketweb
- working to fix grax_gradt_kl — dabi / bitbucketweb
- fixed grad_x of first variation — dabi / bitbucketweb
- subtract identity_coeffs + l1_reg to component kl — rsb / bitbucketweb
- removed dependency on FileNotFoundError for compatibility with py2 — dabi / bitbucketweb
- fixed compatibility issue with py2 — dabi / bitbucketweb
#29 (Jan 9, 2018, 4:56:30 PM)
- fixed bug in usage of einsum due to update to numpy >= 1.14 — dabi / bitbucketweb
#28 (Dec 14, 2017, 12:53:11 AM)
- conditional import of h5py in postprocess scripts — dabi / bitbucketweb
#27 (Dec 13, 2017, 9:52:04 PM)
- fixed gradient and hessian of inverse exponential map — dabi / bitbucketweb
#26 (Nov 28, 2017, 5:03:48 PM)
- removed Docs form MANIFEST.in — dabi / bitbucketweb
#23 (Nov 27, 2017, 6:52:21 PM)
- updated documentation with optional requirement of pyhmc — dabi / bitbucketweb
#22 (Nov 27, 2017, 5:19:47 PM)
- working on slurm submission — dabi / bitbucketweb
- fixed tensordot in integrated squared. This saves memory and improves — dabi / bitbucketweb
- modified runner — dabi / bitbucketweb
- done with plots for the paper! — dabi / bitbucketweb
- fixed plotting for 9000 steps — dabi / bitbucketweb
- working on documentation of published data — dabi / bitbucketweb
- done with documentation of results 945. Working on 9009 steps — dabi / bitbucketweb
- adding results 9009 steps on documentation — dabi / bitbucketweb
- added data and figures 9009 steps — dabi / bitbucketweb
- postprocessing script now adding events on time series — dabi / bitbucketweb
- done with documentation. todo: fix unittests — dabi / bitbucketweb
- added cython dependency for pyhmc — dabi / bitbucketweb
- attempt to fix pyhmc dependencies... — dabi / bitbucketweb
- pyhmc is now optional — dabi / bitbucketweb
- fixed external import in Samplers — dabi / bitbucketweb
- fixed test_L2_misfit and test_scripts — dabi / bitbucketweb
- fixed MarkovOneCompoent in test_distributions — dabi / bitbucketweb
- fixed (1) test L2_min for integrated squared (2) sequential inference — dabi / bitbucketweb
- fixed import of mpi_map — dabi / bitbucketweb
- reduced order in test non linear sequential inference — dabi / bitbucketweb
#20 (Nov 19, 2017, 7:11:22 AM)
- Jenkins test_hotfixes file — dabi / bitbucketweb
- added a postprocess for the stochastic volatility. To be moved in the — dabi / bitbucketweb
- working on figures for poster — dabi / bitbucketweb
- working on last figures — dabi / bitbucketweb
- improved post-process for stochastic volatility. TODO: restructure all — dabi / bitbucketweb
- working on railway model — dabi / bitbucketweb
- working on railway model — dabi / bitbucketweb
- model to be fixed (unstable) — dabi / bitbucketweb
- model unstable.... — dabi / bitbucketweb
- the simpler model works — dabi / bitbucketweb
- random disturbance works — dabi / bitbucketweb
- redesigned model structure — dabi / bitbucketweb
- refactoring the inference algorithms — dabi / bitbucketweb
- working on linear filter/smoothers — dabi / bitbucketweb
- working on linear Gaussian transition distributions — dabi / bitbucketweb
- working on Linear filter/smoother — dabi / bitbucketweb
- working on Kalman filter — dabi / bitbucketweb
- setting up the INS example in order to run the Kalman filter on it... — dabi / bitbucketweb
- working on linear smoother — dabi / bitbucketweb
- working on linear smoother — dabi / bitbucketweb
- fixing the smoothing... — dabi / bitbucketweb
- linear smoother works. Figure out how to quickly get state covariances — dabi / bitbucketweb
- smoothing covariances work. Now working on smoothing means — dabi / bitbucketweb
- working on postprocess smoothing with different lags — dabi / bitbucketweb
- fixed lag smoother works — dabi / bitbucketweb
- refactored all references to old smoother/filters — dabi / bitbucketweb
- working on distribution for filtering — dabi / bitbucketweb
- working on railway vehicle example — dabi / bitbucketweb
- working on linear filtering — dabi / bitbucketweb
- fixed computation of square root for almost singular covariances in — dabi / bitbucketweb
- fixed computation of square root for almost singular covariances in — dabi / bitbucketweb
- working on example — dabi / bitbucketweb
- working on parametric Railway model — dabi / bitbucketweb
- working on linear model with hyper-parameters — dabi / bitbucketweb
- working on linear models with hyper-parameters — dabi / bitbucketweb
- working on ... — dabi / bitbucketweb
- working on parametric distributions and transition densities — dabi / bitbucketweb
- working on gradient of Kalman filter — dabi / bitbucketweb
- in a maze of einsums... — dabi / bitbucketweb
- working on gradients vehicle model — dabi / bitbucketweb
- working on gradients for transition matrices — dabi / bitbucketweb
- the gradient does not work... — dabi / bitbucketweb
- working on gradients!! — dabi / bitbucketweb
- added notebook py file — dabi / bitbucketweb
- fixed coeff properties and working on gradient of linear filter... — dabi / bitbucketweb
- Fixed the gradients (sensitivities) of the linear filter!!!! — dabi / bitbucketweb
- working on parameter estimation problem — dabi / bitbucketweb
- Fixes #77. Implemented function/gradient evaluation and minimization — dabi / bitbucketweb
- now optimization is done with function/gradient function — dabi / bitbucketweb
- working on data generation and higher dimensional cases — dabi / bitbucketweb
- added fungrad option on scripts — dabi / bitbucketweb
- fixing some unittest errors — dabi / bitbucketweb
- this could all be wasted time.. — dabi / bitbucketweb
- brancolando nel buio... — dabi / bitbucketweb
- making progress??? — dabi / bitbucketweb
- same change done on ConditionallyGaussianDistribution should be done on — dabi / bitbucketweb
- wrapping up on railways 1d — dabi / bitbucketweb
- going on with 1d — dabi / bitbucketweb
- working again on gradient marginal loglikelihood — dabi / bitbucketweb
- fixed marginal log likelihood!!! — dabi / bitbucketweb
- fixing for tests — dabi / bitbucketweb
- working on scripts for high-dimensional problem... — dabi / bitbucketweb
- fixing unit tests — dabi / bitbucketweb
- modified BOD example to show marginals — dabi / bitbucketweb
- some updates on tutorial — dabi / bitbucketweb
- working on new figs for paper with up-to-date software — dabi / bitbucketweb
- fixed logging in scripts — dabi / bitbucketweb
- fixed full rbf in defaults — dabi / bitbucketweb
- fixed script sequential — dabi / bitbucketweb
- fixed print in sequential script and fixed parallel implementation... — dabi / bitbucketweb
- additional fix in sequential script — dabi / bitbucketweb
- additional fix in sequential script — dabi / bitbucketweb
- working on the components iterator — dabi / bitbucketweb
- most of the pieces are in place. to be tested — dabi / bitbucketweb
- debugging — dabi / bitbucketweb
- actual implementation pass unit test_kl_minimization — dabi / bitbucketweb
- it works on the tutorial examples — dabi / bitbucketweb
- adding data for tutorial inv-stocvol — dabi / bitbucketweb
- fixed bug in linear span kl minimization — dabi / bitbucketweb
- fixed bug in parallel inverse map from samples — dabi / bitbucketweb
- working on a fix for linear span solver by component — dabi / bitbucketweb
- fixed all (?) bugs on the linear span from samples/ — dabi / bitbucketweb
- fixed bug on linear span solve due to I19 merge — dabi / bitbucketweb
- porting plots from DEPREC branch to this up-to-date branch — dabi / bitbucketweb
- added btc/usd data — dabi / bitbucketweb
- working on stoc vol with 10^4 data. working on tmap-max-likelihood — dabi / bitbucketweb
- working on stoc vol with 10^4 data. working on tmap-max-likelihood — dabi / bitbucketweb
- going on with scripts for plots — dabi / bitbucketweb
- going on with scripts for plots — dabi / bitbucketweb
- done with plotting routines — dabi / bitbucketweb
- working on plotts — dabi / bitbucketweb
- working on basic adaptivity in order to get it into the low-dim paper — dabi / bitbucketweb
- working on basic adaptivity in order to get it into the low-dim paper — dabi / bitbucketweb
- testing new builders — dabi / bitbucketweb
- sequential inference tested with standard builder — dabi / bitbucketweb
- running sequential algorithm with sequential adaptivity — dabi / bitbucketweb
- improved scripts for running sequential inference — dabi / bitbucketweb
- updated runner — dabi / bitbucketweb
- added plot exchanges — dabi / bitbucketweb
- added functionalities to tmap-sequential-tm script — dabi / bitbucketweb
- started with regression adaptivityu — dabi / bitbucketweb
- .... — dabi / bitbucketweb
- calibrating parameters in stoc vol — dabi / bitbucketweb
- finding correct configuration — dabi / bitbucketweb
- working on 945 test case. Added tolerance driven adaptivity — dabi / bitbucketweb
- working on script for 945 observations — dabi / bitbucketweb
- working on 945 configuration and figures — dabi / bitbucketweb
- ready to plot? — dabi / bitbucketweb
- restructured CLI — dabi / bitbucketweb
- restructuring scripts — dabi / bitbucketweb
- working on trimmed postprocess — dabi / bitbucketweb
- restructured CLI commands and added trimming functionalities for — dabi / bitbucketweb
- updated exchange plotting — dabi / bitbucketweb
- added dates in plots — dabi / bitbucketweb
- added metropolis hastings and MH within Gibbs — dabi / bitbucketweb
- working for figures 500 observations — dabi / bitbucketweb
- fixed the default constructor, using Hermite poly for non integrated — dabi / bitbucketweb
- fixed External.py import — dabi / bitbucketweb
- preparing runner for slurm — dabi / bitbucketweb
- setting up slurm — dabi / bitbucketweb
- modified defaults integrated squared. Now using — dabi / bitbucketweb
- fixing typos — dabi / bitbucketweb
#18 (Jun 14, 2017, 12:48:57 PM)
- fixed typo on data-assimialtion model example — dabi / bitbucketweb
#17 (Jun 14, 2017, 10:15:59 AM)
- fixed typo in documentation data-assimilation — dabi / bitbucketweb
#16 (Jun 13, 2017, 5:52:05 PM)
- satellite changes — rebeccae.morrison / bitbucketweb
- dont need to append to log — rebeccae.morrison / bitbucketweb
- updated installation procedure and added toggle sections — dabi / bitbucketweb
- updated sphinx requirements — dabi / bitbucketweb
- updated docs MonotLinSpanApprox and increased size UML diagrams — dabi / bitbucketweb
- bug fixed in grad_a_hess_x_log_det_grad_x, matrix slots matplotlib files — rebeccae.morrison / bitbucketweb
- updated documentation — dabi / bitbucketweb
- updating documentation — dabi / bitbucketweb
- improved slides for BOD example — dabi / bitbucketweb
- updated bod with figures and stochastic volatility — dabi / bitbucketweb
- imporved upload script and fixed visualization problem in bod — dabi / bitbucketweb
- fixes #76 — rebeccae.morrison / bitbucketweb
- modified tolerances — dabi / bitbucketweb
- working on conditional probabilities — dabi / bitbucketweb
- working on factorized distributions — dabi / bitbucketweb
- factorized distribution works — dabi / bitbucketweb
- independent likelihood added — dabi / bitbucketweb
- working on stochastic volatility test case — dabi / bitbucketweb
- derivatives of stoc vol works. TODO: fix the Markov components — dabi / bitbucketweb
- working on markov components — dabi / bitbucketweb
- working on hessian of markov component... — dabi / bitbucketweb
- fixed hessian for markov component and checked stoch vol example works — dabi / bitbucketweb
- working on statistical models — dabi / bitbucketweb
- working on distribution docs — dabi / bitbucketweb
- moved FactorizedDistribution to DistributionBase — dabi / bitbucketweb
- working on loglikelihoods — dabi / bitbucketweb
- Additive models and addive linear Gaussian models added in the — dabi / bitbucketweb
- made a dedicated submodule for likelihoods — dabi / bitbucketweb
- moved likelihoods out of functionals (more intuitive) — dabi / bitbucketweb
- working on linear inertial navigation system model — dabi / bitbucketweb
- working on assimilation example — dabi / bitbucketweb
- fixing markov component — dabi / bitbucketweb
- ok tests markov component — dabi / bitbucketweb
- AR1TransDistr works — dabi / bitbucketweb
- done with data assimilation construction example — dabi / bitbucketweb
- Updated version: v1.0b2 — dabi / bitbucketweb
- added missing files and removed api-files which must be automatically — dabi / bitbucketweb
- updated ignore file — dabi / bitbucketweb
- fixing import issue — dabi / bitbucketweb
- fixing import issue — dabi / bitbucketweb
#15 (May 3, 2017, 11:14:39 AM)
- updated version on conf file — dabi / bitbucketweb
- updated requirements file — dabi / bitbucketweb
#14 (May 2, 2017, 9:12:40 AM)
- added google analytics — dabi / bitbucketweb
- updated website and readme — dabi / bitbucketweb
- fixing api — dabi / bitbucketweb
- completed web-site — dabi / bitbucketweb
- modified upload script to accomodate for bakups — dabi / bitbucketweb
#13 (May 1, 2017, 8:40:17 PM)
- prepared pypi-upload script — dabi / bitbucketweb
- updated classifiers — dabi / bitbucketweb
- updated permissions test-pypi — dabi / bitbucketweb
- added archiving option to mirroring script and removal of ol public — dabi / bitbucketweb
#12 (May 1, 2017, 10:40:26 AM)
- prepared Jenkins test-pypi script and updated to version v1.0b1 — dabi / bitbucketweb
#11 (May 1, 2017, 10:33:47 AM)
- updated public mirror link — dabi / bitbucketweb
- updated mirroring script — dabi / bitbucketweb
- updated mirroring script — dabi / bitbucketweb
- jenkins scripts and mirroring scripts — dabi / bitbucketweb
- shortened mpi-lag — dabi / bitbucketweb
- mirroring script update — dabi / bitbucketweb
- added requirements files and updated test-testpypi script — dabi / bitbucketweb
- updated manifest — dabi / bitbucketweb
- updated mirroring script — dabi / bitbucketweb
- updated testpypi script — dabi / bitbucketweb
#10 (May 1, 2017, 8:01:39 AM)
- updated public mirror link — dabi / bitbucketweb
#9 (Apr 30, 2017, 6:48:56 PM)
- Jenkins config: testing test_scripts — dabi / bitbucketweb
- fixed logging of solving stats — dabi / bitbucketweb
- Jenkins tests — dabi / bitbucketweb
- Jenkins... — dabi / bitbucketweb
- Jenkins... — dabi / bitbucketweb
- Jenkins... — dabi / bitbucketweb
- Jenkins... — dabi / bitbucketweb
- Jenkins... — dabi / bitbucketweb
- Jenkins... — dabi / bitbucketweb
- Jenkins... — dabi / bitbucketweb
- Jenkins... — dabi / bitbucketweb
- Jenkins... — dabi / bitbucketweb
- Jenkins: exit(1) if packages failed — dabi / bitbucketweb
- removed cached dir — dabi / bitbucketweb
- Jenkins... working on setup — dabi / bitbucketweb
- jenkins.. — dabi / bitbucketweb
- jenkins.. — dabi / bitbucketweb
- jenkins... — dabi / bitbucketweb
- jenkins... — dabi / bitbucketweb
- jenkins testing all — dabi / bitbucketweb
- updated email — dabi / bitbucketweb
- removed e-mail contact — dabi / bitbucketweb
- updated readme — dabi / bitbucketweb
- updated readme — dabi / bitbucketweb
- updated readme — dabi / bitbucketweb
- reduce verbosity in tests — dabi / bitbucketweb
- updated scripts and logging — dabi / bitbucketweb
- fixed logging — dabi / bitbucketweb
- removed MPI support for macys-Sierra — dabi / bitbucketweb
- fixed log levels.. — dabi / bitbucketweb
- fixed errors in grad_a_hess_x and grad_a_hess_x_log_det_grad_x — dabi / bitbucketweb
- removed tests for grad_a_hess_x_log_det_grad_x. Filed issue #76 — dabi / bitbucketweb
- updated parallelization and fixed failing test in test_kl_divergence — dabi / bitbucketweb
- fixing test_kl_divergence (maybe) — dabi / bitbucketweb
- turning MPI=True on Macys-Sierra — dabi / bitbucketweb
- fixed linear map in IS kl_divergence — dabi / bitbucketweb
- added jenkins tests for testpypi — dabi / bitbucketweb
- modified linear2d test in order to make it more amenable for PushForward — dabi / bitbucketweb
- simplified setup.py (standardized) — dabi / bitbucketweb
- the user is now required to pre-install numpy — dabi / bitbucketweb
- fixed jenkins script — dabi / bitbucketweb
- removed hardvars — dabi / bitbucketweb
- removed hardvars — dabi / bitbucketweb
- removed pushforward kl_div tests — dabi / bitbucketweb
- split serial and parallel tests — dabi / bitbucketweb
- testing serial — dabi / bitbucketweb
- added mpi option — dabi / bitbucketweb
- fixed check on mpi in jenkins — dabi / bitbucketweb
- added lag on mpi tests in order to accommodate for closing and opening — dabi / bitbucketweb
- set unique random seed=1 — dabi / bitbucketweb
- adding badges to the documentation — dabi / bitbucketweb
- disabled MPI on sierra — dabi / bitbucketweb
- relaxed check on l2 minimization tolerance — dabi / bitbucketweb
- updated badges and upload code — dabi / bitbucketweb
- lower tolerance on transportmap_distributions — dabi / bitbucketweb
- fixed namespace and restored tolerance in transportmap_distributions — dabi / bitbucketweb
- updating index — dabi / bitbucketweb
- added verbose output for failed finite difference — dabi / bitbucketweb
- added verbose output for failed finite difference — dabi / bitbucketweb
- set integrated squared to linear for test_transportmap_distributions — dabi / bitbucketweb
- extending readme — dabi / bitbucketweb
- README.rst edited online with Bitbucket — dabi / bitbucketweb
- README.rst edited online with Bitbucket — dabi / bitbucketweb