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Started by upstream project "SANS_Commit" build number 9801 originally caused by: Started by remote host 18.18.33.14 Running as SYSTEM [EnvInject] - Loading node environment variables. Building remotely on macys_VM in workspace /Users/jenkins/workspace/SANS_Commit/builddir/release_clang/buildnode/macys_VM [WS-CLEANUP] Deleting project workspace... [WS-CLEANUP] Done The recommended git tool is: NONE using credential 3614a4cf-01de-4393-97de-73734b7dd5a2 > /usr/local/bin/git rev-parse --resolve-git-dir /Users/jenkins/workspace/SANS_Commit/builddir/release_clang/buildnode/macys_VM/.git # timeout=10 Fetching changes from the remote Git repository > /usr/local/bin/git config remote.acdl.url ssh://jenkins@acdl.mit.edu/home/svnroot/SANSproto # timeout=10 Pruning obsolete local branches Fetching upstream changes from ssh://jenkins@acdl.mit.edu/home/svnroot/SANSproto > /usr/local/bin/git --version # timeout=10 > git --version # 'git version 2.42.0' using GIT_SSH to set credentials Verifying host key using known hosts file > /usr/local/bin/git fetch --tags --force --progress --prune -- ssh://jenkins@acdl.mit.edu/home/svnroot/SANSproto +refs/heads/*:refs/remotes/acdl/* # timeout=10 Merging Revision 88c61733651e0fef7931b63b89a42b4427407e8d (refs/remotes/acdl/galbramc/develop) to acdl/develop, UserMergeOptions{mergeRemote='acdl', mergeTarget='develop', mergeStrategy='DEFAULT', fastForwardMode='FF'} > /usr/local/bin/git rev-parse acdl/develop^{commit} # timeout=10 > /usr/local/bin/git config core.sparsecheckout # timeout=10 > /usr/local/bin/git checkout -f acdl/develop # timeout=10 > /usr/local/bin/git remote # timeout=10 > /usr/local/bin/git config --get remote.acdl.url # timeout=10 using GIT_SSH to set credentials Verifying host key using known hosts file > /usr/local/bin/git merge --ff 88c61733651e0fef7931b63b89a42b4427407e8d # timeout=10 > /usr/local/bin/git rev-parse HEAD^{commit} # timeout=10 Seen branch in repository acdl/ADRsolver Seen branch in repository acdl/AdjointRefactor/develop Seen branch in repository acdl/DeltaWing Seen branch in repository acdl/Laptop Seen branch in repository acdl/PDEBase Seen branch in repository acdl/albornoz/develop Seen branch in repository acdl/allmaras/Axes Seen branch in repository acdl/allmaras/LIP Seen branch in repository acdl/allmaras/develop Seen branch in repository acdl/allmaras/explicit2D Seen branch in repository acdl/apprentice Seen branch in repository acdl/arthuang/MDG Seen branch in repository acdl/arthuang/RANSAV Seen branch in repository acdl/arthuang/RANSgradients Seen branch in repository acdl/arthuang/develop Seen branch in repository acdl/arthuang/static Seen branch in repository acdl/asmedina/develop Seen branch in repository acdl/blsc/ChemicallyReacting Seen branch in repository acdl/blsc/ExperimentalChemicallyReacting Seen branch in repository acdl/blsc/GloballyConstrained Seen branch in repository acdl/blsc/HLCRM_test Seen branch in repository acdl/blsc/RANSforCarter Seen branch in repository acdl/blsc/Sandia Seen branch in repository acdl/blsc/VolumetricArtificialViscosity Seen branch in repository acdl/blsc/bernstein Seen branch in repository acdl/blsc/develop Seen branch in repository acdl/blsc/forJose Seen branch in repository acdl/blsc/mpi Seen branch in repository acdl/cfrontin/4D_slicing Seen branch in repository acdl/cfrontin/KSeqn Seen branch in repository acdl/cfrontin/develop Seen branch in repository acdl/cfrontin/hypersonic Seen branch in repository acdl/cfrontin/lorenz Seen branch in repository acdl/cwomack/SolverRefactor Seen branch in repository acdl/cwomack/develop Seen branch in repository acdl/darmofal/SANSboom Seen branch in repository acdl/darmofal/develop Seen branch in repository acdl/develop Seen branch in repository acdl/dgilchrist/develop Seen branch in repository acdl/dgoba/develop Seen branch in repository acdl/dmw72/develop Seen branch in repository acdl/eam5515/develop Seen branch in repository acdl/ejwllms/develop Seen branch in repository acdl/galbramc/HSM Seen branch in repository acdl/galbramc/HSM2 Seen branch in repository acdl/galbramc/MPI Seen branch in repository acdl/galbramc/develop Seen branch in repository acdl/hcarson/Laptop Seen branch in repository acdl/hcarson/develop Seen branch in repository acdl/hcarson/exact_vertex_step_MOESS Seen branch in repository acdl/hcarson/hypersonic Seen branch in repository acdl/hnilsen/develop Seen branch in repository acdl/jta29/develop Seen branch in repository acdl/jzavala/develop Seen branch in repository acdl/ksabo/develop Seen branch in repository acdl/kug46/develop Seen branch in repository acdl/kug46/electrokinetic Seen branch in repository acdl/lrochery/develop Seen branch in repository acdl/lunch/develop Seen branch in repository acdl/master Seen branch in repository acdl/mbottot/develop Seen branch in repository acdl/mlarocca/develop Seen branch in repository acdl/mopg/develop Seen branch in repository acdl/pcaplan/develop Seen branch in repository acdl/remotes/origin/blsc/RANSforCarter Seen branch in repository acdl/renat999/develop Seen branch in repository acdl/sag6096/develop Seen branch in repository acdl/savithru/develop Seen branch in repository acdl/savithru/shock Seen branch in repository acdl/shunz/develop Seen branch in repository acdl/shunz/rans_bl_run Seen branch in repository acdl/shunz/rans_lowRe Seen branch in repository acdl/simpsann/develop Seen branch in repository acdl/tonyryu/develop Seen branch in repository acdl/tonyryuSolverRefactor Seen branch in repository acdl/ursachi/boeing Seen branch in repository acdl/ursachi/curvilinear Seen branch in repository acdl/ursachi/curvilinear_clean Seen branch in repository acdl/ursachi/develop Seen branch in repository acdl/ursachi/egads Seen branch in repository acdl/ursachi/hypersonic Seen branch in repository acdl/ursachi/laptop Seen branch in repository acdl/vpr11/develop Seen branch in repository acdl/waligura/BSANS Seen branch in repository acdl/waligura/develop Seen branch in repository acdl/waligura/hypersonic Seen branch in repository acdl/wct/develop Seen branch in repository acdl/wmoses/develop Seen branch in repository acdl/xbc5027/develop Seen 89 remote branches > /usr/local/bin/git show-ref --tags -d # timeout=10 Checking out Revision 814017fbddb52aaa4c06289ee13b5ed6e93f7476 (acdl/develop) > /usr/local/bin/git config core.sparsecheckout # timeout=10 > /usr/local/bin/git checkout -f 814017fbddb52aaa4c06289ee13b5ed6e93f7476 # timeout=10 Commit message: "Merge commit '88c61733651e0fef7931b63b89a42b4427407e8d' into HEAD" Using 'Changelog to branch' strategy. The recommended git tool is: NONE using credential 3614a4cf-01de-4393-97de-73734b7dd5a2 > /usr/local/bin/git rev-parse 814017fbddb52aaa4c06289ee13b5ed6e93f7476^{commit} # timeout=10 The recommended git tool is: NONE using credential 3614a4cf-01de-4393-97de-73734b7dd5a2 [GitCheckoutListener] Recording commits of 'git ssh://jenkins@acdl.mit.edu/home/svnroot/SANSproto' [GitCheckoutListener] Found previous build 'SANS_Commit/builddir=release_clang,buildnode=macys_VM #9800' that contains recorded Git commits [GitCheckoutListener] -> Starting recording of new commits since 'fa0102a' [GitCheckoutListener] -> Multiple parent commits found - storing latest commit of local merge '814017f' [GitCheckoutListener] -> Using parent commit '4cb870a' of local merge as starting point [GitCheckoutListener] -> Storing target branch head '88c6173' (second parent of local merge) [GitCheckoutListener] -> Recorded 200 new commits [GitCheckoutListener] -> The latest commit '814017fbddb52aaa4c06289ee13b5ed6e93f7476' is a merge commit [GitCheckoutListener] -> Git commit decorator could not be created for SCM 'hudson.plugins.git.GitSCM@5c317b09' [macys_VM] $ /bin/bash -xe /var/folders/qk/9zkf0syn149fvhw9mh7hgd5w0000gp/T/jenkins14108728333266249088.sh + [[ macys_VM == *\v\i\g\g\e\n* ]] + /bin/bash -ex /Users/jenkins/workspace/SANS_Commit/builddir/release_clang/buildnode/macys_VM/scripts/jenkins/SANS_Commit.sh + cd /Users/jenkins/workspace/SANS_Commit/builddir/release_clang/buildnode/macys_VM + echo 'Removing any lingering untracked files' Removing any lingering untracked files ++ git ls-files --others --exclude=build --exclude=external + [[ release_clang == *\c\o\v\e\r\a\g\e* ]] + source /Users/jenkins/workspace/SANS_Commit/builddir/release_clang/buildnode/macys_VM/scripts/jenkins/copy_external.sh +++ hostname ++ [[ macys-VM == \r\e\y\n\o\l\d\s* ]] +++ hostname ++ [[ macys-VM == \m\a\c\y\s* ]] ++ cp /Users/jenkins/util/SANSexternal/tetgen1.5.0.tar.gz /Users/jenkins/util/SANSexternal/tetgen1.6.0.tar.gz /Users/jenkins/util/SANSexternal/triangle.zip /Users/jenkins/workspace/SANS_Commit/builddir/release_clang/buildnode/macys_VM/external/ + cmakedir=/Users/jenkins/workspace/SANS_Commit/builddir/release_clang/buildnode/macys_VM/build/release_clang + mkdir -p /Users/jenkins/workspace/SANS_Commit/builddir/release_clang/buildnode/macys_VM/build/release_clang + cd /Users/jenkins/workspace/SANS_Commit/builddir/release_clang/buildnode/macys_VM/build/release_clang + mkdir -p /Users/jenkins/workspace/SANS_Commit/builddir/release_clang/buildnode/macys_VM/build/boosttest + rm -rf '/Users/jenkins/workspace/SANS_Commit/builddir/release_clang/buildnode/macys_VM/test/unit/tmp/*' + rm -rf '/Users/jenkins/workspace/SANS_Commit/builddir/release_clang/buildnode/macys_VM/test/system/tmp/*' + rm -f '/Users/jenkins/workspace/SANS_Commit/builddir/release_clang/buildnode/macys_VM/build/boosttest/*.xml' + rm -f /Users/jenkins/workspace/SANS_Commit/builddir/release_clang/buildnode/macys_VM/build/coverage.xml + [[ release_clang == *\c\o\v\e\r\a\g\e* ]] + CMAKE_ARGS=-DUSE_COTIRE=OFF ++ hostname + [[ macys-VM == \r\e\y\n\o\l\d\s ]] ++ hostname + [[ macys-VM != \m\a\c\y\s\.\m\i\t\.\e\d\u ]] + CMAKE_ARGS='-DUSE_COTIRE=OFF -DVERA_ERROR=ON' + CMAKE_ARGS='-DUSE_COTIRE=OFF -DVERA_ERROR=ON -DUSE_CCACHE=ON -DCCACHE_MAX_SIZE=10G -DCCACHE_CONFIGPATH=/Users/jenkins/SANS_ccache/builddir/release_clang/buildnode/macys_VM' + source /Users/jenkins/workspace/SANS_Commit/builddir/release_clang/buildnode/macys_VM/scripts/jenkins/jenkins_env.sh ++ shopt -s nocasematch +++ pwd ++ dir=/Users/jenkins/workspace/SANS_Commit/builddir/release_clang/buildnode/macys_VM/build/release_clang +++ basename /Users/jenkins/workspace/SANS_Commit/builddir/release_clang/buildnode/macys_VM/build/release_clang ++ builddir=release_clang ++ export AFLR_VERSION=10.17.5 ++ AFLR_VERSION=10.17.5 ++ CAS_VERSION=7.7.0 +++ hostname ++ [[ macys-VM == *\r\e\y\n\o\l\d\s* ]] +++ hostname ++ [[ macys-VM == *\m\a\c\y\s* ]] ++ export PATH=/usr/local/bin:/usr/local/sbin:/usr/local/opt/python/libexec/bin:/usr/bin:/bin:/usr/sbin:/sbin ++ PATH=/usr/local/bin:/usr/local/sbin:/usr/local/opt/python/libexec/bin:/usr/bin:/bin:/usr/sbin:/sbin ++ export LAPACK_DIR=/usr/local/opt/lapack/ ++ LAPACK_DIR=/usr/local/opt/lapack/ ++ export ESP_DIR=/Users/jenkins/util/ESP/EngSketchPad ++ ESP_DIR=/Users/jenkins/util/ESP/EngSketchPad ++ export CAS_DIR=/Users/jenkins/util/ESP/OpenCASCADE-7.7.0 ++ CAS_DIR=/Users/jenkins/util/ESP/OpenCASCADE-7.7.0 ++ export AFLR_DIR=/Users/jenkins/util/AFLR/aflr_lib_10.17.5 ++ AFLR_DIR=/Users/jenkins/util/AFLR/aflr_lib_10.17.5 +++ ls -d /Users/jenkins/util/PETSc/petsc/install_dir ++ export PETSC_DIR=/Users/jenkins/util/PETSc/petsc/install_dir ++ PETSC_DIR=/Users/jenkins/util/PETSc/petsc/install_dir ++ export PARMETIS_DIR=/Users/jenkins/util/parmetis/parmetis-4.0.3/install ++ PARMETIS_DIR=/Users/jenkins/util/parmetis/parmetis-4.0.3/install ++ export PATH=/Users/jenkins/util/fefloa/bin:/usr/local/bin:/usr/local/sbin:/usr/local/opt/python/libexec/bin:/usr/bin:/bin:/usr/sbin:/sbin ++ PATH=/Users/jenkins/util/fefloa/bin:/usr/local/bin:/usr/local/sbin:/usr/local/opt/python/libexec/bin:/usr/bin:/bin:/usr/sbin:/sbin ++ export Boost_NO_SYSTEM_PATHS=OFF ++ Boost_NO_SYSTEM_PATHS=OFF ++ export ASAN_OPTIONS=detect_odr_violation=0 ++ ASAN_OPTIONS=detect_odr_violation=0 ++ env + source /Users/jenkins/workspace/SANS_Commit/builddir/release_clang/buildnode/macys_VM/scripts/jenkins/cmake_jenkins.sh -DXML_BOOST_CHECK=ON -DUSE_LAPACK=ON -DUSE_COTIRE=OFF -DVERA_ERROR=ON -DUSE_CCACHE=ON -DCCACHE_MAX_SIZE=10G -DCCACHE_CONFIGPATH=/Users/jenkins/SANS_ccache/builddir/release_clang/buildnode/macys_VM +++ git rev-parse --show-toplevel ++ WORKSPACE=/Users/jenkins/workspace/SANS_Commit/builddir/release_clang/buildnode/macys_VM +++ uname -a ++ [[ Darwin macys-VM 20.6.0 Darwin Kernel Version 20.6.0: Thu Sep 29 20:15:11 PDT 2022; root:xnu-7195.141.42~1/RELEASE_X86_64 x86_64 == \D\a\r\w\i\n* ]] ++ CMAKEARGS=' -DMPIEXEC_MAX_NUMPROCS=2' +++ hostname ++ [[ macys-VM == \r\e\y\n\o\l\d\s ]] +++ hostname ++ [[ macys-VM == \m\a\c\y\s* ]] ++ CMAKEARGS=' -DMPIEXEC_MAX_NUMPROCS=2 -DUSE_TETGEN=ON -DUSE_TRIANGLE=ON' ++ cmake -DBoost_NO_SYSTEM_PATHS=OFF -DXDIR_DEFAULT=ON -DUI_CAPSAIM=ON -DUI_OPENCSM_UDF=ON -DMPIEXEC_MAX_NUMPROCS=2 -DUSE_TETGEN=ON -DUSE_TRIANGLE=ON -DXML_BOOST_CHECK=ON -DUSE_LAPACK=ON -DUSE_COTIRE=OFF -DVERA_ERROR=ON -DUSE_CCACHE=ON -DCCACHE_MAX_SIZE=10G -DCCACHE_CONFIGPATH=/Users/jenkins/SANS_ccache/builddir/release_clang/buildnode/macys_VM /Users/jenkins/workspace/SANS_Commit/builddir/release_clang/buildnode/macys_VM CMake Deprecation Warning at CMakeLists.txt:3 (CMAKE_MINIMUM_REQUIRED): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument <min> value or use a ...<max> suffix to tell CMake that the project does not need compatibility with older versions. _____ ___ _ _______ / ___// | / | / / ___/ \__ \/ /| | / |/ /\__ \ ___/ / ___ |/ /| /___/ / /____/_/ |_/_/ |_//____/ Solution Adaptive Numerical Simulator -- Found Boost: /usr/local/include (found suitable version "1.82.0", minimum required is "1.50") found components: unit_test_framework iostreams filesystem system mpi serialization regex -- Found Boost: /usr/local/include (found version "1.82.0") found components: unit_test_framework iostreams filesystem system mpi serialization python311 numpy311 regex -- Found Accelerate BLAS -- Could NOT find TETGEN (missing: TETGEN_LIBRARIES TETGEN_INCLUDE_DIRS) -- Checking for /Users/jenkins/workspace/SANS_Commit/builddir/release_clang/buildnode/macys_VM/external/tetgen1.6.0.tar.gz -- Using /Users/jenkins/workspace/SANS_Commit/builddir/release_clang/buildnode/macys_VM/external/tetgen1.6.0.tar.gz -- Could NOT find AVRO (missing: AVRO_LIBRARY) -- Checking for /Users/jenkins/workspace/SANS_Commit/builddir/release_clang/buildnode/macys_VM/external/triangle.zip -- Using /Users/jenkins/workspace/SANS_Commit/builddir/release_clang/buildnode/macys_VM/external/triangle.zip -- Could NOT find SEACAS (missing: SEACAS_LIBRARIES SEACAS_INCLUDE_DIRS) -- Please install qcachegrind for graphical profiling. -- Please install massif-visualizer for graphical heap memory usage. ############################################# # # SANS configuration: # # CMAKE_BUILD_TYPE: Release # CMAKE_INSTALL_PREFIX: /usr/local # CMAKE_CXX_COMPILER name: Clang 12.0.5.12050022 on platform Darwin x86_64 # CMAKE_CXX_COMPILER path: /usr/bin/clang++ # # CMAKE_CXX_IMPLICIT_INCLUDE_DIRECTORIES: # # /Library/Developer/CommandLineTools/SDKs/MacOSX12.1.sdk/usr/include/c++/v1 # /Library/Developer/CommandLineTools/usr/lib/clang/12.0.5/include # /Library/Developer/CommandLineTools/SDKs/MacOSX12.1.sdk/usr/include # /Library/Developer/CommandLineTools/usr/include # # CMAKE_CXX_IMPLICIT_LINK_DIRECTORIES: # # /Library/Developer/CommandLineTools/SDKs/MacOSX12.1.sdk/usr/lib # # Compiler flags used for this build: # # CMAKE_CXX_FLAGS: -std=c++11 -Wall -Wstrict-aliasing # -Wnon-virtual-dtor -pedantic -Wno-variadic-macros # -Wno-#pragma-messages -Wno-undefined-var-template -fstrict-aliasing # -fPIC # # CMAKE_CXX_FLAGS_RELEASE: -O3 -funroll-loops # # Required dependencies: # # EGADS -----------> Met with existing library: # Include Directories: # /Users/jenkins/util/ESP/EngSketchPad/include # Libraries: # /Users/jenkins/util/ESP/EngSketchPad/lib/libegads.dylib # # Boost -----------> Met with existing library: # Include Directories: # /usr/local/include # Libraries: # /usr/local/lib/libboost_unit_test_framework-mt.dylib # /usr/local/lib/libboost_iostreams-mt.dylib # /usr/local/lib/libboost_filesystem-mt.dylib # /usr/local/lib/libboost_system-mt.dylib # /usr/local/lib/libboost_mpi-mt.dylib # /usr/local/lib/libboost_serialization-mt.dylib # /usr/local/lib/libboost_python311-mt.dylib # /usr/local/lib/libboost_numpy311-mt.dylib # /usr/local/lib/libboost_regex-mt.dylib # # PYTHON ----------> Met with existing library: # Include Directories: # /usr/local/opt/python@3.11/Frameworks/Python.framework/Versions/3.11/include/python3.11 # Libraries: # /usr/local/opt/python@3.11/Frameworks/Python.framework/Versions/3.11/lib/libpython3.11.dylib # # NLOPT -----------> Met with existing library: # Include Directories: # /usr/local/include # Libraries: # /usr/local/lib/libnlopt.dylib # # SUITESPARSE -----> Met with existing library: # Include Directories: # /usr/local/include # Libraries: # /usr/local/lib/libumfpack.dylib # /usr/local/lib/libamd.dylib # /usr/local/lib/libcholmod.dylib # /usr/local/lib/libcamd.dylib # /usr/local/lib/libcolamd.dylib # /usr/local/lib/libccolamd.dylib # /usr/local/lib/libsuitesparseconfig.dylib # # BLAS ------------> Met with existing library: # Include Directories: # Libraries: # /Library/Developer/CommandLineTools/SDKs/MacOSX12.1.sdk/System/Library/Frameworks/Accelerate.framework # # METIS -----------> Met with existing library: # Include Directories: # /usr/local/include # Libraries: # /usr/local/lib/libmetis.dylib # # PARMETIS --------> Met with existing library: # Include Directories: # /Users/jenkins/util/parmetis/parmetis-4.0.3/install/include # Libraries: # /Users/jenkins/util/parmetis/parmetis-4.0.3/install/lib/libparmetis.a # # Optional dependencies: # # AFLR ------------> ON. -- Met with existing library: # Include Directories: # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/src # Libraries: # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libanbl3.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libbl1.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libaflr4.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libaflr3.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libaflr2c.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libice3.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libice2.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libotb.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libdftr2.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libdftr3.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libsurf_auto_cpp.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libsurf_auto.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libaflr4.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libdgeom.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/librec3.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/librec2.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libug.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libug3.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libug2.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libuvmap.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libegen.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libqtb.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libug_gq.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libotb.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libug_mp.a # # AVRO ------------> OFF -- Could not find library. # # CAPS ------------> ON. -- Met with existing library: # Include Directories: # /Users/jenkins/util/ESP/EngSketchPad/include # Libraries: # /Users/jenkins/util/ESP/EngSketchPad/lib/libaimUtil.a # /Users/jenkins/util/ESP/EngSketchPad/lib/libocsm.dylib # /Users/jenkins/util/ESP/EngSketchPad/lib/libudunits2.dylib # # LAPACK ----------> ON. -- Met with existing library: # Libraries: # /Library/Developer/CommandLineTools/SDKs/MacOSX12.1.sdk/System/Library/Frameworks/Accelerate.framework # # MKL -------------> OFF. # # PETSC -----------> ON. -- Met with existing library: # Include Directories: # /Users/jenkins/util/PETSc/petsc/install_dir/include # Libraries: # /Users/jenkins/util/PETSc/petsc/install_dir/lib/libpetsc.dylib # # REFINE ----------> OFF. # # SEACAS ----------> OFF -- Could not find library. # # TECIO -----------> OFF. # # TETGEN ----------> ON. -- Met with internal build. -- Could not find library. # Include Directories: # /Users/jenkins/workspace/SANS_Commit/builddir/release_clang/buildnode/macys_VM/build/release_clang/libtetgen-prefix/src/libtetgen # Libraries: # /Users/jenkins/workspace/SANS_Commit/builddir/release_clang/buildnode/macys_VM/build/release_clang/libtetgen-prefix/src/libtetgen-build/libtet.a # # TRIANGLE --------> ON. -- Met with internal build. -- Could not find library. # Include Directories: # /Users/jenkins/workspace/SANS_Commit/builddir/release_clang/buildnode/macys_VM/build/release_clang/libtriangle-prefix/src/libtriangle # Libraries: # /Users/jenkins/workspace/SANS_Commit/builddir/release_clang/buildnode/macys_VM/build/release_clang/libtriangle-prefix/src/libtriangle/libtriangle.a # # MPI -------------> ON. -- Met with existing library: # Include Directories: # /usr/local/Cellar/open-mpi/4.1.5/include # Libraries: # /usr/local/Cellar/open-mpi/4.1.5/lib/libmpi.dylib # mpiexec: # /usr/local/bin/mpiexec # ############################################# -- Configuring done (60.2s) -- Generating done (190.4s) -- Build files have been written to: /Users/jenkins/workspace/SANS_Commit/builddir/release_clang/buildnode/macys_VM/build/release_clang real 4m52.607s user 0m36.227s sys 0m48.403s + cp /Users/jenkins/workspace/SANS_Commit/builddir/release_clang/buildnode/macys_VM/scripts/jenkins/Makefile.parallel . + nproc=2 + [[ release_clang == *\i\n\t\e\l* ]] + [[ release_clang == *\c\o\v\e\r\a\g\e* ]] + make -f Makefile.parallel depends make libmeshb > libmeshb.out make libtriangle > libtriangle.out make libtetgen > libtetgen.out make libmeshb Built target libmeshb real 0m18.200s user 0m16.727s sys 0m0.330s make libtriangle Built target libtriangle real 0m13.982s user 0m13.663s sys 0m0.255s make libtetgen Built target libtetgen real 0m16.580s user 0m16.246s sys 0m0.277s real 0m56.825s user 0m54.436s sys 0m1.383s + make -j 2 -f Makefile.parallel headercheck make gmshLib_headercheck > gmshLib_headercheck.out make EGADSLib_headercheck > EGADSLib_headercheck.out make PorousMediaLib_headercheck > PorousMediaLib_headercheck.out make QuaternionLib_headercheck > QuaternionLib_headercheck.out make PorousMediaLib_headercheck CMake Deprecation Warning at CMakeLists.txt:3 (CMAKE_MINIMUM_REQUIRED): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument <min> value or use a ...<max> suffix to tell CMake that the project does not need compatibility with older versions. _____ ___ _ _______ / ___// | / | / / ___/ \__ \/ /| | / |/ /\__ \ ___/ / ___ |/ /| /___/ / /____/_/ |_/_/ |_//____/ Solution Adaptive Numerical Simulator -- Found Boost: /usr/local/include (found suitable version "1.82.0", minimum required is "1.50") found components: unit_test_framework iostreams filesystem system mpi serialization regex -- Found Boost: /usr/local/include (found version "1.82.0") found components: unit_test_framework iostreams filesystem system mpi serialization python311 numpy311 regex -- Found Accelerate BLAS -- Could NOT find TETGEN (missing: TETGEN_LIBRARIES TETGEN_INCLUDE_DIRS) -- Checking for /Users/jenkins/workspace/SANS_Commit/builddir/release_clang/buildnode/macys_VM/external/tetgen1.6.0.tar.gz -- Using /Users/jenkins/workspace/SANS_Commit/builddir/release_clang/buildnode/macys_VM/external/tetgen1.6.0.tar.gz -- Could NOT find AVRO (missing: AVRO_LIBRARY) -- Checking for /Users/jenkins/workspace/SANS_Commit/builddir/release_clang/buildnode/macys_VM/external/triangle.zip -- Using /Users/jenkins/workspace/SANS_Commit/builddir/release_clang/buildnode/macys_VM/external/triangle.zip CMake Error at /usr/local/Cellar/cmake/3.27.4/share/cmake/Modules/ExternalProject.cmake:1632 (configure_file): No such file or directory Call Stack (most recent call first): /usr/local/Cellar/cmake/3.27.4/share/cmake/Modules/ExternalProject.cmake:3160 (_ep_write_extractfile_script) /usr/local/Cellar/cmake/3.27.4/share/cmake/Modules/ExternalProject.cmake:4345 (_ep_add_download_command) CMakeInclude/Builds/BuildTRIANGLE.cmake:23 (ExternalProject_Add) CMakeInclude/Dependencies.cmake:501 (INCLUDE) CMakeLists.txt:50 (INCLUDE) CMake Error at /usr/local/Cellar/cmake/3.27.4/share/cmake/Modules/ExternalProject.cmake:3196 (configure_file): No such file or directory Call Stack (most recent call first): /usr/local/Cellar/cmake/3.27.4/share/cmake/Modules/ExternalProject.cmake:4345 (_ep_add_download_command) CMakeInclude/Builds/BuildTRIANGLE.cmake:23 (ExternalProject_Add) CMakeInclude/Dependencies.cmake:501 (INCLUDE) CMakeLists.txt:50 (INCLUDE) -- Could NOT find SEACAS (missing: SEACAS_LIBRARIES SEACAS_INCLUDE_DIRS) -- Please install qcachegrind for graphical profiling. -- Please install massif-visualizer for graphical heap memory usage. # /usr/local/lib/libsuitesparseconfig.dylib ############################################# # # SANS configuration: # # CMAKE_BUILD_TYPE: Release # CMAKE_INSTALL_PREFIX: /usr/local # CMAKE_CXX_COMPILER name: Clang 12.0.5.12050022 on platform Darwin x86_64 # CMAKE_CXX_COMPILER path: /usr/bin/clang++ # # # BLAS ------------> Met with existing library: # CMAKE_CXX_IMPLICIT_INCLUDE_DIRECTORIES: # # Include Directories: # # Libraries: # /Library/Developer/CommandLineTools/SDKs/MacOSX12.1.sdk/System/Library/Frameworks/Accelerate.framework /Library/Developer/CommandLineTools/SDKs/MacOSX12.1.sdk/usr/include/c++/v1 # # /Library/Developer/CommandLineTools/usr/lib/clang/12.0.5/include # METIS -----------> Met with existing library: # Include Directories: # # /usr/local/include /Library/Developer/CommandLineTools/SDKs/MacOSX12.1.sdk/usr/include # Libraries: # # /usr/local/lib/libmetis.dylib /Library/Developer/CommandLineTools/usr/include # # # CMAKE_CXX_IMPLICIT_LINK_DIRECTORIES: # # PARMETIS --------> Met with existing library: # # Include Directories: # /Users/jenkins/util/parmetis/parmetis-4.0.3/install/include /Library/Developer/CommandLineTools/SDKs/MacOSX12.1.sdk/usr/lib # Libraries: # /Users/jenkins/util/parmetis/parmetis-4.0.3/install/lib/libparmetis.a # # # Optional dependencies: # Compiler flags used for this build: # # CMAKE_CXX_FLAGS: # # AFLR ------------> ON. -- Met with existing library: -std=c++11 # Include Directories: # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/src -Wall # Libraries: # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libanbl3.a -Wstrict-aliasing # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libbl1.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libaflr4.a # # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libaflr3.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libaflr2c.a -Wnon-virtual-dtor # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libice3.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libice2.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libotb.a -pedantic # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libdftr2.a -Wno-variadic-macros # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libdftr3.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libsurf_auto_cpp.a # # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libsurf_auto.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libaflr4.a -Wno-#pragma-messages # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libdgeom.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/librec3.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/librec2.a -Wno-undefined-var-template # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libug.a -fstrict-aliasing # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libug3.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libug2.a # # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libuvmap.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libegen.a -fPIC # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libqtb.a # # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libug_gq.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libotb.a # CMAKE_CXX_FLAGS_RELEASE: # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libug_mp.a -O3 -funroll-loops # # # Required dependencies: # AVRO ------------> OFF -- Could not find library. # # EGADS -----------> Met with existing library: # # Include Directories: # /Users/jenkins/util/ESP/EngSketchPad/include # CAPS ------------> ON. -- Met with existing library: # Libraries: # Include Directories: # /Users/jenkins/util/ESP/EngSketchPad/include # /Users/jenkins/util/ESP/EngSketchPad/lib/libegads.dylib # Libraries: # /Users/jenkins/util/ESP/EngSketchPad/lib/libaimUtil.a # # /Users/jenkins/util/ESP/EngSketchPad/lib/libocsm.dylib # Boost -----------> Met with existing library: # Include Directories: # /Users/jenkins/util/ESP/EngSketchPad/lib/libudunits2.dylib # /usr/local/include # # Libraries: # /usr/local/lib/libboost_unit_test_framework-mt.dylib # LAPACK ----------> ON. -- Met with existing library: # /usr/local/lib/libboost_iostreams-mt.dylib # /usr/local/lib/libboost_filesystem-mt.dylib # Libraries: # /usr/local/lib/libboost_system-mt.dylib # /usr/local/lib/libboost_mpi-mt.dylib # /Library/Developer/CommandLineTools/SDKs/MacOSX12.1.sdk/System/Library/Frameworks/Accelerate.framework # /usr/local/lib/libboost_serialization-mt.dylib # /usr/local/lib/libboost_python311-mt.dylib # # /usr/local/lib/libboost_numpy311-mt.dylib # MKL -------------> OFF. # /usr/local/lib/libboost_regex-mt.dylib # # # PYTHON ----------> Met with existing library: # Include Directories: # PETSC -----------> ON. -- Met with existing library: # /usr/local/opt/python@3.11/Frameworks/Python.framework/Versions/3.11/include/python3.11 # Libraries: # Include Directories: # /usr/local/opt/python@3.11/Frameworks/Python.framework/Versions/3.11/lib/libpython3.11.dylib # # /Users/jenkins/util/PETSc/petsc/install_dir/include # NLOPT -----------> Met with existing library: # Include Directories: # Libraries: # /usr/local/include # Libraries: # /Users/jenkins/util/PETSc/petsc/install_dir/lib/libpetsc.dylib # /usr/local/lib/libnlopt.dylib # # # SUITESPARSE -----> Met with existing library: # Include Directories: # REFINE ----------> OFF. # /usr/local/include # # Libraries: # /usr/local/lib/libumfpack.dylib # SEACAS ----------> OFF -- Could not find library. # /usr/local/lib/libamd.dylib # /usr/local/lib/libcholmod.dylib # # /usr/local/lib/libcamd.dylib # /usr/local/lib/libcolamd.dylib # TECIO -----------> OFF. # /usr/local/lib/libccolamd.dylib # /usr/local/lib/libsuitesparseconfig.dylib # # # BLAS ------------> Met with existing library: # TETGEN ----------> ON. -- Met with internal build. -- Could not find library. # Include Directories: # Include Directories: # Libraries: # /Users/jenkins/workspace/SANS_Commit/builddir/release_clang/buildnode/macys_VM/build/release_clang/libtetgen-prefix/src/libtetgen # /Library/Developer/CommandLineTools/SDKs/MacOSX12.1.sdk/System/Library/Frameworks/Accelerate.framework # # Libraries: # METIS -----------> Met with existing library: # Include Directories: # /Users/jenkins/workspace/SANS_Commit/builddir/release_clang/buildnode/macys_VM/build/release_clang/libtetgen-prefix/src/libtetgen-build/libtet.a # /usr/local/include # Libraries: # # /usr/local/lib/libmetis.dylib # # TRIANGLE --------> ON. -- Met with internal build. -- Could not find library. # PARMETIS --------> Met with existing library: # Include Directories: # Include Directories: # /Users/jenkins/workspace/SANS_Commit/builddir/release_clang/buildnode/macys_VM/build/release_clang/libtriangle-prefix/src/libtriangle # /Users/jenkins/util/parmetis/parmetis-4.0.3/install/include # Libraries: # Libraries: # /Users/jenkins/util/parmetis/parmetis-4.0.3/install/lib/libparmetis.a # # /Users/jenkins/workspace/SANS_Commit/builddir/release_clang/buildnode/macys_VM/build/release_clang/libtriangle-prefix/src/libtriangle/libtriangle.a # Optional dependencies: # # # AFLR ------------> ON. -- Met with existing library: # MPI -------------> ON. -- Met with existing library: # Include Directories: # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/src # Include Directories: # Libraries: # /usr/local/Cellar/open-mpi/4.1.5/include # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libanbl3.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libbl1.a # Libraries: # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libaflr4.a # /usr/local/Cellar/open-mpi/4.1.5/lib/libmpi.dylib # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libaflr3.a # mpiexec: # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libaflr2c.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libice3.a # /usr/local/bin/mpiexec # # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libice2.a ############################################# # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libotb.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libdftr2.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libdftr3.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libsurf_auto_cpp.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libsurf_auto.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libaflr4.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libdgeom.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/librec3.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/librec2.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libug.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libug3.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libug2.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libuvmap.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libegen.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libqtb.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libug_gq.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libotb.a # /Users/jenkins/util/AFLR/aflr_lib_10.17.5/MacOSX-x86-64/lib/libug_mp.a # # AVRO ------------> OFF -- Could not find library. # # CAPS ------------> ON. -- Met with existing library: # Include Directories: # /Users/jenkins/util/ESP/EngSketchPad/include # Libraries: # /Users/jenkins/util/ESP/EngSketchPad/lib/libaimUtil.a # /Users/jenkins/util/ESP/EngSketchPad/lib/libocsm.dylib # /Users/jenkins/util/ESP/EngSketchPad/lib/libudunits2.dylib # # LAPACK ----------> ON. -- Met with existing library: # Libraries: # /Library/Developer/CommandLineTools/SDKs/MacOSX12.1.sdk/System/Library/Frameworks/Accelerate.framework # # MKL -------------> OFF. # # PETSC -----------> ON. -- Met with existing library: # Include Directories: # /Users/jenkins/util/PETSc/petsc/install_dir/include # Libraries: # /Users/jenkins/util/PETSc/petsc/install_dir/lib/libpetsc.dylib # # REFINE ----------> OFF. # # SEACAS ----------> OFF -- Could not find library. # # TECIO -----------> OFF. # # TETGEN ----------> ON. -- Met with internal build. -- Could not find library. # Include Directories: # /Users/jenkins/workspace/SANS_Commit/builddir/release_clang/buildnode/macys_VM/build/release_clang/libtetgen-prefix/src/libtetgen # Libraries: # /Users/jenkins/workspace/SANS_Commit/builddir/release_clang/buildnode/macys_VM/build/release_clang/libtetgen-prefix/src/libtetgen-build/libtet.a # # TRIANGLE --------> ON. -- Met with internal build. -- Could not find library. # Include Directories: # /Users/jenkins/workspace/SANS_Commit/builddir/release_clang/buildnode/macys_VM/build/release_clang/libtriangle-prefix/src/libtriangle # Libraries: # /Users/jenkins/workspace/SANS_Commit/builddir/release_clang/buildnode/macys_VM/build/release_clang/libtriangle-prefix/src/libtriangle/libtriangle.a # # MPI -------------> ON. -- Met with existing library: # Include Directories: # /usr/local/Cellar/open-mpi/4.1.5/include # Libraries: # /usr/local/Cellar/open-mpi/4.1.5/lib/libmpi.dylib # mpiexec: # /usr/local/bin/mpiexec # ############################################# -- Configuring incomplete, errors occurred! make[2]: *** [cmake_check_build_system] Error 1 make[1]: *** [PorousMediaLib_headercheck] Error 2 real 0m21.425s user 0m13.251s sys 0m5.274s make: *** [PorousMediaLib_headercheck] Error 1 make: *** Waiting for unfinished jobs.... Build step 'Execute shell' marked build as failure [GNU C Compiler (gcc)ClangIntel Compiler (C, Fortran)Vera++] Skipping execution of recorder since overall result is 'FAILURE' INFO: Processing BoostTest-1.x (default) INFO: [BoostTest-1.x (default)] - No test report file(s) were found with the pattern 'build/boosttest/*.xml' relative to '/Users/jenkins/workspace/SANS_Commit/builddir/release_clang/buildnode/macys_VM' for the testing framework 'BoostTest-1.x (default)'. Did you enter a pattern relative to (and within) the workspace directory? Did you generate the result report(s) for 'BoostTest-1.x (default)'?" WARNING: All test reports are empty. INFO: Check 'Failed Tests' threshold. INFO: Check 'Skipped Tests' threshold. [Checks API] No suitable checks publisher found. INFO: Setting the build status to SUCCESS [Coverage] Skipping execution of coverage recorder since overall result is 'FAILURE' Finished: FAILURE